Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0891670 | XP_013443349.1 | 94.932 | 296 | 15 | 0 | 1 | 296 | 161 | 456 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0891670 | sp|Q9FIT1|IQD23_ARATH | 39.700 | 267 | 88 | 12 | 1 | 263 | 161 | 358 | 7.54e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0891670 | A0A072TIL7 | 94.932 | 296 | 15 | 0 | 1 | 296 | 161 | 456 | 0.0 | 574 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018010 | Msa0891670 | 0.826780 | 2.248264e-54 | -8.615850e-47 |
| Msa0022230 | Msa0891670 | 0.848758 | 4.997088e-60 | -8.615850e-47 |
| Msa0026120 | Msa0891670 | 0.800624 | 1.320615e-48 | -8.615850e-47 |
| Msa0028450 | Msa0891670 | 0.809482 | 1.851509e-50 | -8.615850e-47 |
| Msa0033580 | Msa0891670 | 0.805732 | 1.157948e-49 | -8.615850e-47 |
| Msa0039200 | Msa0891670 | 0.808558 | 2.919988e-50 | -8.615850e-47 |
| Msa0046670 | Msa0891670 | 0.823679 | 1.216752e-53 | -8.615850e-47 |
| Msa0049670 | Msa0891670 | 0.805041 | 1.616428e-49 | -8.615850e-47 |
| Msa0050560 | Msa0891670 | 0.808925 | 2.437188e-50 | -8.615850e-47 |
| Msa0072710 | Msa0891670 | 0.816597 | 5.094992e-52 | -8.615850e-47 |
| Msa0078080 | Msa0891670 | 0.830451 | 2.914865e-55 | -8.615850e-47 |
| Msa0079550 | Msa0891670 | 0.813638 | 2.312472e-51 | -8.615850e-47 |
| Msa0084550 | Msa0891670 | 0.810381 | 1.185604e-50 | -8.615850e-47 |
| Msa0086820 | Msa0891670 | 0.804551 | 2.045898e-49 | -8.615850e-47 |
| Msa0090350 | Msa0891670 | 0.805801 | 1.120345e-49 | -8.615850e-47 |
| Msa0092750 | Msa0891670 | 0.801806 | 7.569203e-49 | -8.615850e-47 |
| Msa0094900 | Msa0891670 | 0.802693 | 4.971460e-49 | -8.615850e-47 |
| Msa0094990 | Msa0891670 | 0.805483 | 1.305922e-49 | -8.615850e-47 |
| Msa0096230 | Msa0891670 | 0.810490 | 1.123505e-50 | -8.615850e-47 |
| Msa0110500 | Msa0891670 | 0.814716 | 1.337205e-51 | -8.615850e-47 |
| Msa0114960 | Msa0891670 | 0.803255 | 3.804544e-49 | -8.615850e-47 |
| Msa0120310 | Msa0891670 | 0.829968 | 3.825562e-55 | -8.615850e-47 |
| Msa0606680 | Msa0891670 | 0.807093 | 5.981726e-50 | -8.615850e-47 |
| Msa0618260 | Msa0891670 | 0.818344 | 2.058919e-52 | -8.615850e-47 |
| Msa0619170 | Msa0891670 | 0.806861 | 6.696093e-50 | -8.615850e-47 |
| Msa0619480 | Msa0891670 | 0.811710 | 6.109693e-51 | -8.615850e-47 |
| Msa0622400 | Msa0891670 | 0.805409 | 1.353786e-49 | -8.615850e-47 |
| Msa0625310 | Msa0891670 | 0.836341 | 9.903998e-57 | -8.615850e-47 |
| Msa0625550 | Msa0891670 | 0.806057 | 9.893097e-50 | -8.615850e-47 |
| Msa0626890 | Msa0891670 | 0.827456 | 1.549263e-54 | -8.615850e-47 |
| Msa0635350 | Msa0891670 | 0.805541 | 1.270137e-49 | -8.615850e-47 |
| Msa0635990 | Msa0891670 | 0.801300 | 9.609822e-49 | -8.615850e-47 |
| Msa0636840 | Msa0891670 | 0.847689 | 9.865952e-60 | -8.615850e-47 |
| Msa0639880 | Msa0891670 | 0.802052 | 6.735231e-49 | -8.615850e-47 |
| Msa0640780 | Msa0891670 | 0.801973 | 6.994287e-49 | -8.615850e-47 |
| Msa0642150 | Msa0891670 | 0.852392 | 4.756586e-61 | -8.615850e-47 |
| Msa0659640 | Msa0891670 | 0.800864 | 1.180153e-48 | -8.615850e-47 |
| Msa0665010 | Msa0891670 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa0668160 | Msa0891670 | 0.828398 | 9.193506e-55 | -8.615850e-47 |
| Msa0669160 | Msa0891670 | 0.813944 | 1.980295e-51 | -8.615850e-47 |
| Msa0674680 | Msa0891670 | 0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0677590 | Msa0891670 | 0.816979 | 4.183409e-52 | -8.615850e-47 |
| Msa0678240 | Msa0891670 | 0.805065 | 1.598060e-49 | -8.615850e-47 |
| Msa0687320 | Msa0891670 | 0.844504 | 7.258681e-59 | -8.615850e-47 |
| Msa0687620 | Msa0891670 | 0.811758 | 5.965168e-51 | -8.615850e-47 |
| Msa0697230 | Msa0891670 | 0.818384 | 2.016364e-52 | -8.615850e-47 |
| Msa0703150 | Msa0891670 | 0.811272 | 7.607847e-51 | -8.615850e-47 |
| Msa0703620 | Msa0891670 | 0.801799 | 7.591523e-49 | -8.615850e-47 |
| Msa0704750 | Msa0891670 | 0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa0705710 | Msa0891670 | 0.814238 | 1.705972e-51 | -8.615850e-47 |
| Msa0712100 | Msa0891670 | 0.813354 | 2.671359e-51 | -8.615850e-47 |
| Msa0713530 | Msa0891670 | 0.804154 | 2.475769e-49 | -8.615850e-47 |
| Msa0720850 | Msa0891670 | 0.833448 | 5.301975e-56 | -8.615850e-47 |
| Msa0736330 | Msa0891670 | 0.810410 | 1.168710e-50 | -8.615850e-47 |
| Msa0749160 | Msa0891670 | 0.814158 | 1.776108e-51 | -8.615850e-47 |
| Msa0749900 | Msa0891670 | 0.811910 | 5.526598e-51 | -8.615850e-47 |
| Msa0756410 | Msa0891670 | 0.815522 | 8.853171e-52 | -8.615850e-47 |
| Msa0757090 | Msa0891670 | 0.809400 | 1.928309e-50 | -8.615850e-47 |
| Msa0761930 | Msa0891670 | 0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0762390 | Msa0891670 | 0.818978 | 1.478121e-52 | -8.615850e-47 |
| Msa0762470 | Msa0891670 | 0.821060 | 4.935548e-53 | -8.615850e-47 |
| Msa0774560 | Msa0891670 | 0.857807 | 1.268901e-62 | -8.615850e-47 |
| Msa0778060 | Msa0891670 | 0.810815 | 9.552347e-51 | -8.615850e-47 |
| Msa0786330 | Msa0891670 | 0.800722 | 1.261157e-48 | -8.615850e-47 |
| Msa0795930 | Msa0891670 | 0.819779 | 9.707022e-53 | -8.615850e-47 |
| Msa0797240 | Msa0891670 | 0.800424 | 1.450782e-48 | -8.615850e-47 |
| Msa0803930 | Msa0891670 | 0.804812 | 1.804972e-49 | -8.615850e-47 |
| Msa0830120 | Msa0891670 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa0830450 | Msa0891670 | 0.812156 | 4.885709e-51 | -8.615850e-47 |
| Msa0835580 | Msa0891670 | 0.808139 | 3.586289e-50 | -8.615850e-47 |
| Msa0836200 | Msa0891670 | 0.808721 | 2.694443e-50 | -8.615850e-47 |
| Msa0837590 | Msa0891670 | 0.817959 | 2.515794e-52 | -8.615850e-47 |
| Msa0840570 | Msa0891670 | 0.846714 | 1.826221e-59 | -8.615850e-47 |
| Msa0841980 | Msa0891670 | 0.847020 | 1.505762e-59 | -8.615850e-47 |
| Msa0121080 | Msa0891670 | 0.802149 | 6.433404e-49 | -8.615850e-47 |
| Msa0127210 | Msa0891670 | 0.801070 | 1.070881e-48 | -8.615850e-47 |
| Msa0130620 | Msa0891670 | 0.809616 | 1.732382e-50 | -8.615850e-47 |
| Msa0133670 | Msa0891670 | 0.808251 | 3.394845e-50 | -8.615850e-47 |
| Msa0133880 | Msa0891670 | 0.807921 | 3.991306e-50 | -8.615850e-47 |
| Msa0137810 | Msa0891670 | 0.808889 | 2.481144e-50 | -8.615850e-47 |
| Msa0144510 | Msa0891670 | 0.804281 | 2.329107e-49 | -8.615850e-47 |
| Msa0155350 | Msa0891670 | 0.807938 | 3.958733e-50 | -8.615850e-47 |
| Msa0164630 | Msa0891670 | 0.819112 | 1.377951e-52 | -8.615850e-47 |
| Msa0166580 | Msa0891670 | 0.809451 | 1.880420e-50 | -8.615850e-47 |
| Msa0176530 | Msa0891670 | 0.812312 | 4.517493e-51 | -8.615850e-47 |
| Msa0184030 | Msa0891670 | 0.807157 | 5.797538e-50 | -8.615850e-47 |
| Msa0184120 | Msa0891670 | 0.813210 | 2.872061e-51 | -8.615850e-47 |
| Msa0184850 | Msa0891670 | 0.818490 | 1.907311e-52 | -8.615850e-47 |
| Msa0187560 | Msa0891670 | 0.811095 | 8.311331e-51 | -8.615850e-47 |
| Msa0198140 | Msa0891670 | 0.803090 | 4.114307e-49 | -8.615850e-47 |
| Msa0198220 | Msa0891670 | 0.804967 | 1.675161e-49 | -8.615850e-47 |
| Msa0206600 | Msa0891670 | 0.844856 | 5.835014e-59 | -8.615850e-47 |
| Msa0207220 | Msa0891670 | 0.824179 | 9.285067e-54 | -8.615850e-47 |
| Msa0207530 | Msa0891670 | 0.837977 | 3.779491e-57 | -8.615850e-47 |
| Msa0207900 | Msa0891670 | 0.833767 | 4.414407e-56 | -8.615850e-47 |
| Msa0207990 | Msa0891670 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
| Msa0218480 | Msa0891670 | 0.821230 | 4.508719e-53 | -8.615850e-47 |
| Msa0218590 | Msa0891670 | 0.823171 | 1.598948e-53 | -8.615850e-47 |
| Msa0221940 | Msa0891670 | 0.818603 | 1.797941e-52 | -8.615850e-47 |
| Msa0222720 | Msa0891670 | 0.810291 | 1.240249e-50 | -8.615850e-47 |
| Msa0226580 | Msa0891670 | 0.814790 | 1.287585e-51 | -8.615850e-47 |
| Msa0227960 | Msa0891670 | 0.815452 | 9.178281e-52 | -8.615850e-47 |
| Msa0228360 | Msa0891670 | 0.820388 | 7.044131e-53 | -8.615850e-47 |
| Msa0367310 | Msa0891670 | 0.805444 | 1.331124e-49 | -8.615850e-47 |
| Msa0372250 | Msa0891670 | 0.810381 | 1.186053e-50 | -8.615850e-47 |
| Msa0372550 | Msa0891670 | 0.808521 | 2.973940e-50 | -8.615850e-47 |
| Msa0372990 | Msa0891670 | 0.801371 | 9.292504e-49 | -8.615850e-47 |
| Msa0381990 | Msa0891670 | 0.800397 | 1.469287e-48 | -8.615850e-47 |
| Msa0385870 | Msa0891670 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0398850 | Msa0891670 | 0.846880 | 1.644313e-59 | -8.615850e-47 |
| Msa0404330 | Msa0891670 | 0.809586 | 1.758236e-50 | -8.615850e-47 |
| Msa0404440 | Msa0891670 | 0.814885 | 1.226616e-51 | -8.615850e-47 |
| Msa0413040 | Msa0891670 | 0.800956 | 1.130078e-48 | -8.615850e-47 |
| Msa0421100 | Msa0891670 | 0.817045 | 4.042058e-52 | -8.615850e-47 |
| Msa0423590 | Msa0891670 | 0.827759 | 1.310369e-54 | -8.615850e-47 |
| Msa0425080 | Msa0891670 | 0.806667 | 7.359428e-50 | -8.615850e-47 |
| Msa0426990 | Msa0891670 | 0.815549 | 8.734479e-52 | -8.615850e-47 |
| Msa0431310 | Msa0891670 | 0.802888 | 4.530546e-49 | -8.615850e-47 |
| Msa0449030 | Msa0891670 | 0.806292 | 8.828426e-50 | -8.615850e-47 |
| Msa0459920 | Msa0891670 | 0.820270 | 7.496805e-53 | -8.615850e-47 |
| Msa0463580 | Msa0891670 | 0.821825 | 3.286633e-53 | -8.615850e-47 |
| Msa0471890 | Msa0891670 | 0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0473450 | Msa0891670 | 0.825374 | 4.854482e-54 | -8.615850e-47 |
| Msa0481620 | Msa0891670 | 0.811908 | 5.532062e-51 | -8.615850e-47 |
| Msa0240290 | Msa0891670 | 0.801664 | 8.092765e-49 | -8.615850e-47 |
| Msa0249670 | Msa0891670 | 0.825750 | 3.954435e-54 | -8.615850e-47 |
| Msa0251140 | Msa0891670 | 0.830686 | 2.553757e-55 | -8.615850e-47 |
| Msa0258280 | Msa0891670 | 0.816983 | 4.173163e-52 | -8.615850e-47 |
| Msa0263520 | Msa0891670 | 0.817434 | 3.304161e-52 | -8.615850e-47 |
| Msa0264020 | Msa0891670 | 0.807268 | 5.492239e-50 | -8.615850e-47 |
| Msa0270610 | Msa0891670 | 0.806913 | 6.530520e-50 | -8.615850e-47 |
| Msa0270640 | Msa0891670 | 0.816076 | 6.661346e-52 | -8.615850e-47 |
| Msa0272420 | Msa0891670 | 0.803383 | 3.579143e-49 | -8.615850e-47 |
| Msa0278080 | Msa0891670 | 0.826169 | 3.144401e-54 | -8.615850e-47 |
| Msa0278340 | Msa0891670 | 0.800428 | 1.448167e-48 | -8.615850e-47 |
| Msa0282880 | Msa0891670 | 0.807813 | 4.208589e-50 | -8.615850e-47 |
| Msa0288270 | Msa0891670 | 0.818333 | 2.071023e-52 | -8.615850e-47 |
| Msa0288280 | Msa0891670 | 0.817414 | 3.339384e-52 | -8.615850e-47 |
| Msa0292150 | Msa0891670 | 0.822641 | 2.125180e-53 | -8.615850e-47 |
| Msa0292300 | Msa0891670 | 0.817608 | 3.019239e-52 | -8.615850e-47 |
| Msa0299270 | Msa0891670 | 0.802874 | 4.561508e-49 | -8.615850e-47 |
| Msa0301300 | Msa0891670 | 0.817142 | 3.844214e-52 | -8.615850e-47 |
| Msa0304350 | Msa0891670 | 0.815144 | 1.074389e-51 | -8.615850e-47 |
| Msa0305470 | Msa0891670 | 0.802763 | 4.807729e-49 | -8.615850e-47 |
| Msa0305910 | Msa0891670 | 0.819807 | 9.567095e-53 | -8.615850e-47 |
| Msa0312570 | Msa0891670 | 0.814230 | 1.712571e-51 | -8.615850e-47 |
| Msa0315010 | Msa0891670 | 0.814446 | 1.534267e-51 | -8.615850e-47 |
| Msa0329060 | Msa0891670 | 0.803593 | 3.237702e-49 | -8.615850e-47 |
| Msa0330370 | Msa0891670 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
| Msa0338670 | Msa0891670 | 0.820221 | 7.690206e-53 | -8.615850e-47 |
| Msa0340830 | Msa0891670 | 0.808527 | 2.965002e-50 | -8.615850e-47 |
| Msa0340870 | Msa0891670 | 0.828125 | 1.069779e-54 | -8.615850e-47 |
| Msa0351930 | Msa0891670 | 0.835390 | 1.725959e-56 | -8.615850e-47 |
| Msa0355590 | Msa0891670 | 0.805677 | 1.189114e-49 | -8.615850e-47 |
| Msa0358720 | Msa0891670 | 0.833092 | 6.505081e-56 | -8.615850e-47 |
| Msa0492050 | Msa0891670 | 0.823818 | 1.128650e-53 | -8.615850e-47 |
| Msa0493430 | Msa0891670 | 0.842560 | 2.400116e-58 | -8.615850e-47 |
| Msa0507190 | Msa0891670 | 0.814245 | 1.699277e-51 | -8.615850e-47 |
| Msa0508620 | Msa0891670 | 0.819156 | 1.346667e-52 | -8.615850e-47 |
| Msa0508660 | Msa0891670 | 0.819374 | 1.201250e-52 | -8.615850e-47 |
| Msa0515400 | Msa0891670 | 0.808944 | 2.414606e-50 | -8.615850e-47 |
| Msa0515420 | Msa0891670 | 0.817064 | 4.003221e-52 | -8.615850e-47 |
| Msa0515830 | Msa0891670 | 0.807987 | 3.863421e-50 | -8.615850e-47 |
| Msa0521100 | Msa0891670 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
| Msa0530250 | Msa0891670 | 0.817347 | 3.457482e-52 | -8.615850e-47 |
| Msa0539400 | Msa0891670 | 0.857472 | 1.594518e-62 | -8.615850e-47 |
| Msa0540120 | Msa0891670 | 0.815476 | 9.067684e-52 | -8.615850e-47 |
| Msa0558800 | Msa0891670 | 0.801282 | 9.692088e-49 | -8.615850e-47 |
| Msa0560010 | Msa0891670 | 0.809744 | 1.626275e-50 | -8.615850e-47 |
| Msa0568260 | Msa0891670 | 0.818026 | 2.429440e-52 | -8.615850e-47 |
| Msa0568810 | Msa0891670 | 0.808721 | 2.694536e-50 | -8.615850e-47 |
| Msa0569630 | Msa0891670 | 0.815270 | 1.007388e-51 | -8.615850e-47 |
| Msa0570310 | Msa0891670 | 0.824400 | 8.238437e-54 | -8.615850e-47 |
| Msa0571220 | Msa0891670 | 0.808925 | 2.437233e-50 | -8.615850e-47 |
| Msa0573970 | Msa0891670 | 0.803181 | 3.940670e-49 | -8.615850e-47 |
| Msa0576150 | Msa0891670 | 0.803344 | 3.646089e-49 | -8.615850e-47 |
| Msa0577960 | Msa0891670 | 0.808832 | 2.551376e-50 | -8.615850e-47 |
| Msa0580430 | Msa0891670 | 0.809202 | 2.125693e-50 | -8.615850e-47 |
| Msa0587060 | Msa0891670 | 0.823951 | 1.050634e-53 | -8.615850e-47 |
| Msa0587070 | Msa0891670 | 0.847091 | 1.440091e-59 | -8.615850e-47 |
| Msa0595240 | Msa0891670 | 0.833343 | 5.633003e-56 | -8.615850e-47 |
| Msa0848780 | Msa0891670 | 0.816337 | 5.824107e-52 | -8.615850e-47 |
| Msa0849290 | Msa0891670 | 0.845877 | 3.087581e-59 | -8.615850e-47 |
| Msa0868040 | Msa0891670 | 0.822391 | 2.428607e-53 | -8.615850e-47 |
| Msa0868140 | Msa0891670 | 0.801215 | 1.000338e-48 | -8.615850e-47 |
| Msa0880170 | Msa0891670 | 0.853584 | 2.169677e-61 | -8.615850e-47 |
| Msa0883690 | Msa0891670 | 0.806377 | 8.471185e-50 | -8.615850e-47 |
| Msa0883880 | Msa0891670 | 0.805328 | 1.407596e-49 | -8.615850e-47 |
| Msa0891670 | Msa0964570 | 0.815662 | 8.242959e-52 | -8.615850e-47 |
| Msa0891670 | Msa0967260 | 0.814489 | 1.501061e-51 | -8.615850e-47 |
| Msa0891670 | Msa0978440 | 0.804834 | 1.786169e-49 | -8.615850e-47 |
| Msa0891670 | Msa1008960 | 0.811189 | 7.929675e-51 | -8.615850e-47 |
| Msa0891670 | Msa1016450 | 0.813132 | 2.988480e-51 | -8.615850e-47 |
| Msa0891670 | Msa1031220 | 0.810544 | 1.093599e-50 | -8.615850e-47 |
| Msa0891670 | Msa1033460 | 0.822262 | 2.602994e-53 | -8.615850e-47 |
| Msa0891670 | Msa1033710 | 0.822534 | 2.250452e-53 | -8.615850e-47 |
| Msa0891670 | Msa1035740 | 0.810606 | 1.060515e-50 | -8.615850e-47 |
| Msa0891670 | Msa1041620 | 0.806035 | 1.000216e-49 | -8.615850e-47 |
| Msa0891670 | Msa1071380 | 0.803575 | 3.265731e-49 | -8.615850e-47 |
| Msa0891670 | Msa1071460 | 0.809214 | 2.113835e-50 | -8.615850e-47 |
| Msa0891670 | Msa1072640 | 0.859400 | 4.247222e-63 | -8.615850e-47 |
| Msa0891670 | Msa1073140 | 0.811689 | 6.175966e-51 | -8.615850e-47 |
| Msa0891670 | Msa1083850 | 0.815909 | 7.259944e-52 | -8.615850e-47 |
| Msa0891670 | Msa1113780 | 0.804371 | 2.230664e-49 | -8.615850e-47 |
| Msa0891670 | Msa1127530 | 0.807742 | 4.356398e-50 | -8.615850e-47 |
| Msa0891670 | Msa1129320 | 0.808254 | 3.389603e-50 | -8.615850e-47 |
| Msa0891670 | Msa1144380 | 0.803959 | 2.717335e-49 | -8.615850e-47 |
| Msa0891670 | Msa1147600 | 0.817717 | 2.853328e-52 | -8.615850e-47 |
| Msa0891670 | Msa1156530 | 0.802089 | 6.619474e-49 | -8.615850e-47 |
| Msa0891670 | Msa1160470 | 0.814376 | 1.589863e-51 | -8.615850e-47 |
| Msa0891670 | Msa1161520 | 0.824647 | 7.205519e-54 | -8.615850e-47 |
| Msa0891670 | Msa1164830 | 0.817487 | 3.215364e-52 | -8.615850e-47 |
| Msa0891670 | Msa1165330 | 0.804485 | 2.112302e-49 | -8.615850e-47 |
| Msa0891670 | Msa1166520 | 0.807462 | 4.996121e-50 | -8.615850e-47 |
| Msa0891670 | Msa1173670 | 0.807067 | 6.057535e-50 | -8.615850e-47 |
| Msa0891670 | Msa1182400 | 0.828199 | 1.026763e-54 | -8.615850e-47 |
| Msa0891670 | Msa1182480 | 0.839765 | 1.302870e-57 | -8.615850e-47 |
| Msa0891670 | Msa1182960 | 0.845489 | 3.934746e-59 | -8.615850e-47 |
| Msa0891670 | Msa1183730 | 0.810257 | 1.261421e-50 | -8.615850e-47 |
| Msa0891670 | Msa1184640 | 0.819413 | 1.176743e-52 | -8.615850e-47 |
| Msa0891670 | Msa1186010 | 0.817414 | 3.338867e-52 | -8.615850e-47 |
| Msa0891670 | Msa1203090 | 0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa0891670 | Msa1203840 | 0.821495 | 3.917752e-53 | -8.615850e-47 |
| Msa0891670 | Msa1203860 | 0.804069 | 2.578456e-49 | -8.615850e-47 |
| Msa0891670 | Msa1208250 | 0.831501 | 1.610234e-55 | -8.615850e-47 |
| Msa0891670 | Msa1215660 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0891670 | Msa1216700 | 0.817921 | 2.565997e-52 | -8.615850e-47 |
| Msa0891670 | Msa1216900 | 0.816039 | 6.789661e-52 | -8.615850e-47 |
| Msa0891670 | Msa1230190 | 0.845714 | 3.418408e-59 | -8.615850e-47 |
| Msa0891670 | Msa1252040 | 0.810965 | 8.868306e-51 | -8.615850e-47 |
| Msa0891670 | Msa1258200 | 0.831721 | 1.421612e-55 | -8.615850e-47 |
| Msa0891670 | Msa1262740 | 0.804402 | 2.198223e-49 | -8.615850e-47 |
| Msa0891670 | Msa1263970 | 0.810160 | 1.323586e-50 | -8.615850e-47 |
| Msa0891670 | Msa1264230 | 0.800484 | 1.410165e-48 | -8.615850e-47 |
| Msa0891670 | Msa1272770 | 0.838593 | 2.622584e-57 | -8.615850e-47 |
| Msa0891670 | Msa1279240 | 0.805771 | 1.136366e-49 | -8.615850e-47 |
| Msa0891670 | Msa1300880 | 0.806946 | 6.425459e-50 | -8.615850e-47 |
| Msa0891670 | Msa1301410 | 0.814170 | 1.765999e-51 | -8.615850e-47 |
| Msa0891670 | Msa1302920 | 0.805581 | 1.246081e-49 | -8.615850e-47 |
| Msa0891670 | Msa1309910 | 0.819102 | 1.384842e-52 | -8.615850e-47 |
| Msa0891670 | Msa1317340 | 0.808562 | 2.913583e-50 | -8.615850e-47 |
| Msa0891670 | Msa1319520 | 0.806674 | 7.335487e-50 | -8.615850e-47 |
| Msa0891670 | Msa1319720 | 0.824038 | 1.002041e-53 | -8.615850e-47 |
| Msa0891670 | Msa1329660 | 0.819932 | 8.957680e-53 | -8.615850e-47 |
| Msa0891670 | Msa1330910 | 0.801889 | 7.277465e-49 | -8.615850e-47 |
| Msa0891670 | Msa1335130 | 0.805357 | 1.388176e-49 | -8.615850e-47 |
| Msa0891670 | Msa1336350 | 0.818292 | 2.115389e-52 | -8.615850e-47 |
| Msa0891670 | Msa1343540 | 0.802749 | 4.839394e-49 | -8.615850e-47 |
| Msa0891670 | Msa1349490 | 0.818728 | 1.684994e-52 | -8.615850e-47 |
| Msa0891670 | Msa1352820 | 0.816669 | 4.908266e-52 | -8.615850e-47 |
| Msa0891670 | Msa1357380 | 0.833098 | 6.483102e-56 | -8.615850e-47 |
| Msa0891670 | Msa1366700 | 0.837466 | 5.112257e-57 | -8.615850e-47 |
| Msa0891670 | Msa1374210 | 0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0891670 | Msa1374610 | 0.804103 | 2.536952e-49 | -8.615850e-47 |
| Msa0891670 | Msa1381720 | 0.816107 | 6.558586e-52 | -8.615850e-47 |
| Msa0891670 | Msa1384980 | 0.820626 | 6.211428e-53 | -8.615850e-47 |
| Msa0891670 | Msa1385940 | 0.814527 | 1.472093e-51 | -8.615850e-47 |
| Msa0891670 | Msa1386020 | 0.802527 | 5.377777e-49 | -8.615850e-47 |
| Msa0891670 | Msa1391600 | 0.802706 | 4.940827e-49 | -8.615850e-47 |
| Msa0891670 | Msa1393600 | 0.815357 | 9.633739e-52 | -8.615850e-47 |
| Msa0891670 | Msa1397110 | 0.804435 | 2.162960e-49 | -8.615850e-47 |
| Msa0891670 | Msa1400600 | 0.827616 | 1.417634e-54 | -8.615850e-47 |
| Msa0891670 | Msa1408190 | 0.818191 | 2.229367e-52 | -8.615850e-47 |
| Msa0891670 | Msa1419040 | 0.806403 | 8.368530e-50 | -8.615850e-47 |
| Msa0891670 | Msa1420130 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0891670 | Msa1426690 | 0.812246 | 4.668127e-51 | -8.615850e-47 |
| Msa0891670 | Msa1432250 | 0.844029 | 9.736233e-59 | -8.615850e-47 |
| Msa0891670 | Msa1433060 | 0.809122 | 2.211934e-50 | -8.615850e-47 |
| Msa0891670 | Msa1433380 | 0.805000 | 1.649107e-49 | -8.615850e-47 |
| Msa0891670 | Msa1437650 | 0.817108 | 3.913228e-52 | -8.615850e-47 |
| Msa0891670 | Msa1439160 | 0.842471 | 2.533982e-58 | -8.615850e-47 |
| Msa0891670 | Msa1448990 | 0.815833 | 7.547469e-52 | -8.615850e-47 |
| Msa0891670 | Msa1450420 | 0.813631 | 2.321761e-51 | -8.615850e-47 |
| Msa0891670 | Msa1450850 | 0.836242 | 1.049798e-56 | -8.615850e-47 |
| Msa0891670 | Msa1459630 | 0.816701 | 4.829177e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0891670 | MtrunA17_Chr6g0472551 | 94.932 | 296 | 15 | 0 | 1 | 296 | 161 | 456 | 0.0 | 574 |
| Msa0891670 | MtrunA17_Chr1g0203711 | 65.781 | 301 | 80 | 9 | 1 | 296 | 159 | 441 | 5.39e-118 | 346 |
| Msa0891670 | MtrunA17_Chr4g0057321 | 33.226 | 310 | 176 | 8 | 2 | 296 | 133 | 426 | 1.55e-34 | 129 |
| Msa0891670 | MtrunA17_Chr1g0204901 | 33.516 | 182 | 104 | 7 | 87 | 261 | 215 | 386 | 1.48e-11 | 64.7 |
| Msa0891670 | MtrunA17_Chr1g0166431 | 33.951 | 162 | 94 | 6 | 107 | 261 | 216 | 371 | 3.40e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0891670 | AT5G62070.1 | 39.700 | 267 | 88 | 12 | 1 | 263 | 161 | 358 | 7.66e-23 | 97.8 |
| Msa0891670 | AT5G07240.1 | 35.273 | 275 | 91 | 13 | 1 | 263 | 150 | 349 | 2.68e-22 | 96.3 |
| Msa0891670 | AT5G07240.2 | 35.273 | 275 | 91 | 13 | 1 | 263 | 196 | 395 | 2.91e-22 | 96.7 |
| Msa0891670 | AT4G23060.1 | 29.206 | 315 | 160 | 11 | 2 | 296 | 212 | 483 | 9.23e-15 | 74.7 |
Find 75 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAATGTCACCTTAAAT+TGG | 0.238670 | 6_1:+67728469 | None:intergenic |
| TGGCAAATACTCAATCTTCT+AGG | 0.255891 | 6_1:-67728667 | Msa0891670:CDS |
| TTGGGAGTAGTACCAATTTA+AGG | 0.275762 | 6_1:-67728481 | Msa0891670:CDS |
| CTCTGGTTATCCTAGTTATA+TGG | 0.278103 | 6_1:-67728687 | Msa0891670:CDS |
| ATTCAAGGCCTTTGGGAATC+AGG | 0.291166 | 6_1:-67728572 | Msa0891670:CDS |
| CTAGGTCTATTCAAGGCCTT+TGG | 0.325862 | 6_1:-67728580 | Msa0891670:CDS |
| ACAAGTAGCTTGAACAGAAT+TGG | 0.333286 | 6_1:-67728500 | Msa0891670:CDS |
| AGCAAGTCGTGTGCACATTT+CGG | 0.339048 | 6_1:-67730450 | Msa0891670:CDS |
| GTTTCAAGTAACAATGGTTA+AGG | 0.346348 | 6_1:-67727942 | None:intergenic |
| CTAACCAATTTGAACCTAAC+CGG | 0.349715 | 6_1:+67729119 | None:intergenic |
| GTGGACTACTCTCGGCGGTT+CGG | 0.368312 | 6_1:+67728807 | None:intergenic |
| AGGCTAGAGTTTGAGAGATA+TGG | 0.377602 | 6_1:-67728611 | Msa0891670:CDS |
| TCGATGAAGCGCCGACGGTT+TGG | 0.388650 | 6_1:+67729068 | None:intergenic |
| GAGCCCGGTTAGGTTCAAAT+TGG | 0.391331 | 6_1:-67729123 | Msa0891670:CDS |
| GTCTATAGTATGAAATTTGA+TGG | 0.407555 | 6_1:-67729396 | Msa0891670:CDS |
| CTACTAAAAGTGAGAGTTCA+TGG | 0.413052 | 6_1:-67728727 | Msa0891670:CDS |
| TTTCAAGTAACAATGGTTAA+GGG | 0.414531 | 6_1:-67727941 | None:intergenic |
| ATATAGTTCTGTAATTTGTA+TGG | 0.436036 | 6_1:+67728354 | None:intergenic |
| TAGGTCTATTCAAGGCCTTT+GGG | 0.441659 | 6_1:-67728579 | Msa0891670:CDS |
| CAAGTAGCTTGAACAGAATT+GGG | 0.453202 | 6_1:-67728499 | Msa0891670:CDS |
| GTTCAAATTGGTTAGACAGT+TGG | 0.455901 | 6_1:-67729111 | Msa0891670:CDS |
| AGAGATATGGTTCATCTACT+AGG | 0.456026 | 6_1:-67728598 | Msa0891670:CDS |
| CATTGGTTCGACTTCAGTCT+CGG | 0.466438 | 6_1:-67730478 | Msa0891670:CDS |
| CTGTTCAAGCTACTTGTGGC+TGG | 0.485442 | 6_1:+67728506 | None:intergenic |
| TCAAACTCTAGCCTTTGTCT+TGG | 0.489677 | 6_1:+67728620 | None:intergenic |
| AAATTCTTGAAGTAGATACT+TGG | 0.490960 | 6_1:-67729015 | Msa0891670:CDS |
| GGAACCGAAAAGTGAGTGTT+GGG | 0.493066 | 6_1:-67728258 | Msa0891670:three_prime_UTR |
| TACTCAATCTTCTAGGGCTA+AGG | 0.493624 | 6_1:-67728660 | Msa0891670:CDS |
| AAGTATGAAATTAAGACAAA+AGG | 0.500227 | 6_1:-67727977 | Msa0891670:three_prime_UTR |
| AGTGGGTGTTCATAATCATC+AGG | 0.504957 | 6_1:+67729423 | None:intergenic |
| TGAGTATTTGCCATATAACT+AGG | 0.506933 | 6_1:+67728677 | None:intergenic |
| GGCAAATACTCAATCTTCTA+GGG | 0.514783 | 6_1:-67728666 | Msa0891670:CDS |
| ATTAAGAGCACTTAAAGCAT+TGG | 0.515042 | 6_1:-67730573 | Msa0891670:five_prime_UTR |
| TTCAAGGCCTTTGGGAATCA+GGG | 0.517803 | 6_1:-67728571 | Msa0891670:CDS |
| AACTTTGAAAGAGCCCGGTT+AGG | 0.518762 | 6_1:-67729133 | Msa0891670:CDS |
| AATTCTGTTCAAGCTACTTG+TGG | 0.522848 | 6_1:+67728502 | None:intergenic |
| TGCTTCATAGAAGAGAGACT+TGG | 0.525983 | 6_1:+67728863 | None:intergenic |
| GCTTTAGAAGAGCGTTTCGA+CGG | 0.530264 | 6_1:+67728893 | None:intergenic |
| ACATGAACTTTGAAAGAGCC+CGG | 0.533175 | 6_1:-67729138 | Msa0891670:CDS |
| CAAGACTCGAAAGTGGTTCG+AGG | 0.538246 | 6_1:-67728766 | Msa0891670:CDS |
| TACTAAAAGTGAGAGTTCAT+GGG | 0.539030 | 6_1:-67728726 | Msa0891670:CDS |
| ATGTGGTCTTTGATAGTGTA+GGG | 0.542279 | 6_1:+67728078 | None:intergenic |
| ATGAATTTGGAAGGCAAGGA+GGG | 0.543058 | 6_1:-67730597 | None:intergenic |
| AATCTTCTAGGGCTAAGGTT+AGG | 0.545081 | 6_1:-67728655 | Msa0891670:CDS |
| TCATCTACTAGGTCTATTCA+AGG | 0.545942 | 6_1:-67728587 | Msa0891670:CDS |
| ATTGGTTCGACTTCAGTCTC+GGG | 0.550042 | 6_1:-67730477 | Msa0891670:CDS |
| GCTTCTTCAAGACTCGAAAG+TGG | 0.557955 | 6_1:-67728773 | Msa0891670:CDS |
| CTATGTTGTGATTTCAAATG+TGG | 0.568605 | 6_1:+67728989 | None:intergenic |
| AGGAACCGAAAAGTGAGTGT+TGG | 0.568610 | 6_1:-67728259 | Msa0891670:three_prime_UTR |
| TTCATACTATAGACGCGAAG+TGG | 0.574104 | 6_1:+67729405 | None:intergenic |
| CTCGAAAGTGGTTCGAGGCG+AGG | 0.574732 | 6_1:-67728761 | Msa0891670:CDS |
| TGATGGATCTTCCATCCTCA+AGG | 0.574798 | 6_1:-67729379 | Msa0891670:intron |
| TCTTCTATGAAGCATCAGAA+AGG | 0.575782 | 6_1:-67728854 | Msa0891670:CDS |
| AACCGCCGAGAGTAGTCCAC+AGG | 0.576504 | 6_1:-67728804 | Msa0891670:CDS |
| TAAAATGTTTCAAGTAACAA+TGG | 0.578859 | 6_1:-67727948 | Msa0891670:three_prime_UTR |
| AATCATGAATACCTTGAGGA+TGG | 0.581465 | 6_1:+67729368 | None:intergenic |
| TATGAAATTAAGACAAAAGG+AGG | 0.586332 | 6_1:-67727974 | Msa0891670:three_prime_UTR |
| TGAATAATGATGTTGAAAAG+AGG | 0.593176 | 6_1:+67728958 | None:intergenic |
| AAATTGGTTAGACAGTTGGA+TGG | 0.594225 | 6_1:-67729107 | Msa0891670:CDS |
| AAATGCCTGTGGACTACTCT+CGG | 0.594597 | 6_1:+67728799 | None:intergenic |
| CACAAAGTGCTCCAAGACAA+AGG | 0.601702 | 6_1:-67728631 | Msa0891670:CDS |
| TAACCAATTTGAACCTAACC+GGG | 0.608700 | 6_1:+67729120 | None:intergenic |
| TATGAATTTGGAAGGCAAGG+AGG | 0.623814 | 6_1:-67730598 | None:intergenic |
| GCTAAGACGAATGCAAACAT+TGG | 0.623828 | 6_1:-67730495 | Msa0891670:CDS |
| CATGTGGTCTTTGATAGTGT+AGG | 0.632553 | 6_1:+67728077 | None:intergenic |
| TCATACTATAGACGCGAAGT+GGG | 0.632812 | 6_1:+67729406 | None:intergenic |
| CTACACTATCAAAGACCACA+TGG | 0.636585 | 6_1:-67728076 | Msa0891670:three_prime_UTR |
| AACACATGGAGCCAAACCGT+CGG | 0.647970 | 6_1:-67729079 | Msa0891670:CDS |
| ACTAAAAGTGAGAGTTCATG+GGG | 0.653519 | 6_1:-67728725 | Msa0891670:CDS |
| AATTAGACCCTGATTCCCAA+AGG | 0.667307 | 6_1:+67728564 | None:intergenic |
| AAATTGCAAGCATTAGTGAG+AGG | 0.679400 | 6_1:-67730548 | Msa0891670:five_prime_UTR |
| GTTGGATGGAAGAAAACACA+TGG | 0.681144 | 6_1:-67729093 | Msa0891670:CDS |
| ATGGACTGAAACATGAGTGT+AGG | 0.695801 | 6_1:+67728373 | None:intergenic |
| AAAGTCAAAAGTCAACCATG+TGG | 0.740937 | 6_1:+67728061 | None:intergenic |
| TGCCTGTGGACTACTCTCGG+CGG | 0.763952 | 6_1:+67728802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTAAAAAATATAGAAAA+GGG | + | chr6_1:67728580-67728599 | None:intergenic | 10.0% |
| !! | AAAAGTAAAAAATATAGAAA+AGG | + | chr6_1:67728581-67728600 | None:intergenic | 10.0% |
| !!! | TATAATTTTAGAAACAAAAT+TGG | + | chr6_1:67728770-67728789 | None:intergenic | 10.0% |
| !!! | TTTAGATTTTTGAAAATATT+CGG | - | chr6_1:67728914-67728933 | Msa0891670:CDS | 10.0% |
| !!! | TTACAATAATGAAAATTTTA+TGG | - | chr6_1:67729601-67729620 | Msa0891670:intron | 10.0% |
| !! | AATAAATTTAATCCTAAAAA+AGG | - | chr6_1:67730327-67730346 | Msa0891670:intron | 10.0% |
| !!! | TATTATAATAGTTTTTCTTA+GGG | - | chr6_1:67730392-67730411 | Msa0891670:intron | 10.0% |
| !! | AAAAAAGTAAATTAGCAATT+TGG | + | chr6_1:67728405-67728424 | None:intergenic | 15.0% |
| !!! | AAAGTATTATTCTTTAGATA+AGG | - | chr6_1:67728705-67728724 | Msa0891670:CDS | 15.0% |
| !! | TGAAATATACAAAATTCTAA+AGG | - | chr6_1:67728811-67728830 | Msa0891670:CDS | 15.0% |
| !! | GAAATATACAAAATTCTAAA+GGG | - | chr6_1:67728812-67728831 | Msa0891670:CDS | 15.0% |
| !! | TAGATTTATAAATCATAGAT+CGG | + | chr6_1:67728886-67728905 | None:intergenic | 15.0% |
| !!! | AATCCTGTAAATTAAATTTT+AGG | + | chr6_1:67729190-67729209 | None:intergenic | 15.0% |
| !!! | GTATTATAATAGTTTTTCTT+AGG | - | chr6_1:67730391-67730410 | Msa0891670:intron | 15.0% |
| !!! | TTGCTATTTTGTAAATTTGA+TGG | - | chr6_1:67728347-67728366 | Msa0891670:three_prime_UTR | 20.0% |
| !! | TTTGGTACTAAAAATTCTAA+GGG | + | chr6_1:67728387-67728406 | None:intergenic | 20.0% |
| !! | ATTTGGTACTAAAAATTCTA+AGG | + | chr6_1:67728388-67728407 | None:intergenic | 20.0% |
| !! | CTTATCTTAGTAAAAGTTTA+TGG | - | chr6_1:67728453-67728472 | Msa0891670:three_prime_UTR | 20.0% |
| !!! | AAAATATCATTTTGCAAACT+AGG | - | chr6_1:67728674-67728693 | Msa0891670:CDS | 20.0% |
| !! | ATTATAAAAGTCAGTCAATT+TGG | - | chr6_1:67728784-67728803 | Msa0891670:CDS | 20.0% |
| !! | GATCTATGATTTATAAATCT+AGG | - | chr6_1:67728885-67728904 | Msa0891670:CDS | 20.0% |
| !!! | ATATAGTTCTGTAATTTGTA+TGG | + | chr6_1:67730177-67730196 | None:intergenic | 20.0% |
| !!! | GTACTTTTTTTACAATTTGT+AGG | - | chr6_1:67730249-67730268 | Msa0891670:intron | 20.0% |
| !! | AAGTATGAAATTAAGACAAA+AGG | - | chr6_1:67730551-67730570 | Msa0891670:five_prime_UTR | 20.0% |
| !!! | TAAAATGTTTCAAGTAACAA+TGG | - | chr6_1:67730580-67730599 | Msa0891670:five_prime_UTR | 20.0% |
| !!! | AAAAGTTTGATTTGCTTACA+GGG | + | chr6_1:67728141-67728160 | None:intergenic | 25.0% |
| !!! | AAAAAGTTTGATTTGCTTAC+AGG | + | chr6_1:67728142-67728161 | None:intergenic | 25.0% |
| !! | AAAAGTTTATGGTAACTTGT+TGG | - | chr6_1:67728464-67728483 | Msa0891670:exon | 25.0% |
| !! | TATTCTTTAGATAAGGCTTT+TGG | - | chr6_1:67728712-67728731 | Msa0891670:CDS | 25.0% |
| ! | ATTGTAAGGATTGGATAATT+TGG | + | chr6_1:67728975-67728994 | None:intergenic | 25.0% |
| ! | ATTTGAAGAAAAAAAGTCAG+AGG | + | chr6_1:67729074-67729093 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCAAATTGATGC+AGG | - | chr6_1:67729080-67729099 | Msa0891670:CDS | 25.0% |
| ! | GTCTATAGTATGAAATTTGA+TGG | - | chr6_1:67729132-67729151 | Msa0891670:CDS | 25.0% |
| !! | GTGCCTAAAATTTAATTTAC+AGG | - | chr6_1:67729184-67729203 | Msa0891670:intron | 25.0% |
| ! | AAATTCTTGAAGTAGATACT+TGG | - | chr6_1:67729513-67729532 | Msa0891670:intron | 25.0% |
| ! | TGAATAATGATGTTGAAAAG+AGG | + | chr6_1:67729573-67729592 | None:intergenic | 25.0% |
| !! | CAGAAATAGATTCTGATTTT+AGG | - | chr6_1:67729987-67730006 | Msa0891670:intron | 25.0% |
| !! | ATTGCAAATTTTATGGAAGA+AGG | - | chr6_1:67730074-67730093 | Msa0891670:intron | 25.0% |
| !! | TTGCAAATTTTATGGAAGAA+GGG | - | chr6_1:67730075-67730094 | Msa0891670:intron | 25.0% |
| ! | TATGAAATTAAGACAAAAGG+AGG | - | chr6_1:67730554-67730573 | Msa0891670:five_prime_UTR | 25.0% |
| !! | ATTAAGAGCACTTAAAGCAT+TGG | - | chr6_1:67727955-67727974 | Msa0891670:three_prime_UTR | 30.0% |
| GTCATTGAAATCGTAAATGT+TGG | - | chr6_1:67728183-67728202 | Msa0891670:three_prime_UTR | 30.0% | |
| ! | TGATTCCGCAAAAGATTTTA+TGG | - | chr6_1:67728323-67728342 | Msa0891670:three_prime_UTR | 30.0% |
| ! | GCAAACCATAAAATCTTTTG+CGG | + | chr6_1:67728331-67728350 | None:intergenic | 30.0% |
| TTGTTGGAAAAGCTATGTAA+TGG | - | chr6_1:67728480-67728499 | Msa0891670:CDS | 30.0% | |
| AGATTCCAAATTGCAAGAAT+TGG | + | chr6_1:67728617-67728636 | None:intergenic | 30.0% | |
| GTAGGCATCATCATATAATT+TGG | + | chr6_1:67728941-67728960 | None:intergenic | 30.0% | |
| TATCCAATCCTTACAATTTC+AGG | - | chr6_1:67728978-67728997 | Msa0891670:CDS | 30.0% | |
| ATCCAATCCTTACAATTTCA+GGG | - | chr6_1:67728979-67728998 | Msa0891670:CDS | 30.0% | |
| ATTTAGTCCCTGAAATTGTA+AGG | + | chr6_1:67728989-67729008 | None:intergenic | 30.0% | |
| GGATTCATAGATGATTTACA+TGG | - | chr6_1:67729205-67729224 | Msa0891670:intron | 30.0% | |
| AGTATACATGTAACATGTGT+TGG | - | chr6_1:67729296-67729315 | Msa0891670:intron | 30.0% | |
| CTATGTTGTGATTTCAAATG+TGG | + | chr6_1:67729542-67729561 | None:intergenic | 30.0% | |
| !! | TCACTTTTAGTAGGTGTAAA+AGG | + | chr6_1:67729794-67729813 | None:intergenic | 30.0% |
| TACTAAAAGTGAGAGTTCAT+GGG | - | chr6_1:67729802-67729821 | Msa0891670:intron | 30.0% | |
| TGAGTATTTGCCATATAACT+AGG | + | chr6_1:67729854-67729873 | None:intergenic | 30.0% | |
| TTTGCAATGTCACCTTAAAT+TGG | + | chr6_1:67730062-67730081 | None:intergenic | 30.0% | |
| ! | AGGTGACATTGCAAATTTTA+TGG | - | chr6_1:67730067-67730086 | Msa0891670:intron | 30.0% |
| ! | TGCAAATTTTATGGAAGAAG+GGG | - | chr6_1:67730076-67730095 | Msa0891670:intron | 30.0% |
| !! | ATGCTTTTTATTTCCTGAAG+AGG | - | chr6_1:67730195-67730214 | Msa0891670:intron | 30.0% |
| !!! | TCTCTTCAAGTTCCTTTTTT+AGG | + | chr6_1:67730342-67730361 | None:intergenic | 30.0% |
| AAATTGCAAGCATTAGTGAG+AGG | - | chr6_1:67727980-67727999 | Msa0891670:three_prime_UTR | 35.0% | |
| AATTCAACAACTTACGTCGA+TGG | - | chr6_1:67728251-67728270 | Msa0891670:three_prime_UTR | 35.0% | |
| CCAAATTGCAAGAATTGGTA+GGG | + | chr6_1:67728612-67728631 | None:intergenic | 35.0% | |
| TCCAAATTGCAAGAATTGGT+AGG | + | chr6_1:67728613-67728632 | None:intergenic | 35.0% | |
| AATCATGAATACCTTGAGGA+TGG | + | chr6_1:67729163-67729182 | None:intergenic | 35.0% | |
| TAACCAATTTGAACCTAACC+GGG | + | chr6_1:67729411-67729430 | None:intergenic | 35.0% | |
| CTAACCAATTTGAACCTAAC+CGG | + | chr6_1:67729412-67729431 | None:intergenic | 35.0% | |
| GTTCAAATTGGTTAGACAGT+TGG | - | chr6_1:67729417-67729436 | Msa0891670:CDS | 35.0% | |
| AAATTGGTTAGACAGTTGGA+TGG | - | chr6_1:67729421-67729440 | Msa0891670:CDS | 35.0% | |
| ! | TCTTCTATGAAGCATCAGAA+AGG | - | chr6_1:67729674-67729693 | Msa0891670:intron | 35.0% |
| !! | CATGAACTCTCACTTTTAGT+AGG | + | chr6_1:67729803-67729822 | None:intergenic | 35.0% |
| CTACTAAAAGTGAGAGTTCA+TGG | - | chr6_1:67729801-67729820 | Msa0891670:intron | 35.0% | |
| ACTAAAAGTGAGAGTTCATG+GGG | - | chr6_1:67729803-67729822 | Msa0891670:intron | 35.0% | |
| !! | GGATTTTTCAATGCTTACTC+TGG | - | chr6_1:67729824-67729843 | Msa0891670:intron | 35.0% |
| CTCTGGTTATCCTAGTTATA+TGG | - | chr6_1:67729841-67729860 | Msa0891670:intron | 35.0% | |
| TGGCAAATACTCAATCTTCT+AGG | - | chr6_1:67729861-67729880 | Msa0891670:intron | 35.0% | |
| GGCAAATACTCAATCTTCTA+GGG | - | chr6_1:67729862-67729881 | Msa0891670:intron | 35.0% | |
| AGAGATATGGTTCATCTACT+AGG | - | chr6_1:67729930-67729949 | Msa0891670:intron | 35.0% | |
| TCATCTACTAGGTCTATTCA+AGG | - | chr6_1:67729941-67729960 | Msa0891670:intron | 35.0% | |
| !! | AGATTCTGATTTTAGGAGCA+AGG | - | chr6_1:67729994-67730013 | Msa0891670:intron | 35.0% |
| AATTCTGTTCAAGCTACTTG+TGG | + | chr6_1:67730029-67730048 | None:intergenic | 35.0% | |
| ACAAGTAGCTTGAACAGAAT+TGG | - | chr6_1:67730028-67730047 | Msa0891670:intron | 35.0% | |
| CAAGTAGCTTGAACAGAATT+GGG | - | chr6_1:67730029-67730048 | Msa0891670:intron | 35.0% | |
| TTGGGAGTAGTACCAATTTA+AGG | - | chr6_1:67730047-67730066 | Msa0891670:intron | 35.0% | |
| !!! | TATGCTTTTAGTTCCTCTTC+AGG | + | chr6_1:67730211-67730230 | None:intergenic | 35.0% |
| !! | ATGTGGTCTTTGATAGTGTA+GGG | + | chr6_1:67730453-67730472 | None:intergenic | 35.0% |
| AAAGTCAAAAGTCAACCATG+TGG | + | chr6_1:67730470-67730489 | None:intergenic | 35.0% | |
| GCTAAGACGAATGCAAACAT+TGG | - | chr6_1:67728033-67728052 | Msa0891670:three_prime_UTR | 40.0% | |
| CCCTACCAATTCTTGCAATT+TGG | - | chr6_1:67728609-67728628 | Msa0891670:CDS | 40.0% | |
| GTCCCTGAAATTGTAAGGAT+TGG | + | chr6_1:67728984-67729003 | None:intergenic | 40.0% | |
| AGTGGGTGTTCATAATCATC+AGG | + | chr6_1:67729108-67729127 | None:intergenic | 40.0% | |
| TCATACTATAGACGCGAAGT+GGG | + | chr6_1:67729125-67729144 | None:intergenic | 40.0% | |
| TTCATACTATAGACGCGAAG+TGG | + | chr6_1:67729126-67729145 | None:intergenic | 40.0% | |
| CACGAATCATGAATACCTTG+AGG | + | chr6_1:67729167-67729186 | None:intergenic | 40.0% | |
| ! | ACATGAACTTTGAAAGAGCC+CGG | - | chr6_1:67729390-67729409 | Msa0891670:CDS | 40.0% |
| GTTGGATGGAAGAAAACACA+TGG | - | chr6_1:67729435-67729454 | Msa0891670:intron | 40.0% | |
| TGCTTCATAGAAGAGAGACT+TGG | + | chr6_1:67729668-67729687 | None:intergenic | 40.0% | |
| !! | TACTCAATCTTCTAGGGCTA+AGG | - | chr6_1:67729868-67729887 | Msa0891670:intron | 40.0% |
| !! | AATCTTCTAGGGCTAAGGTT+AGG | - | chr6_1:67729873-67729892 | Msa0891670:intron | 40.0% |
| ! | TCAAACTCTAGCCTTTGTCT+TGG | + | chr6_1:67729911-67729930 | None:intergenic | 40.0% |
| AGGCTAGAGTTTGAGAGATA+TGG | - | chr6_1:67729917-67729936 | Msa0891670:intron | 40.0% | |
| TAGGTCTATTCAAGGCCTTT+GGG | - | chr6_1:67729949-67729968 | Msa0891670:intron | 40.0% | |
| AATTAGACCCTGATTCCCAA+AGG | + | chr6_1:67729967-67729986 | None:intergenic | 40.0% | |
| ! | ATGGACTGAAACATGAGTGT+AGG | + | chr6_1:67730158-67730177 | None:intergenic | 40.0% |
| !! | CAATCCCAACACTCACTTTT+CGG | + | chr6_1:67730277-67730296 | None:intergenic | 40.0% |
| !! | CATGTGGTCTTTGATAGTGT+AGG | + | chr6_1:67730454-67730473 | None:intergenic | 40.0% |
| CTACACTATCAAAGACCACA+TGG | - | chr6_1:67730452-67730471 | Msa0891670:CDS | 40.0% | |
| !! | CATTGGTTCGACTTCAGTCT+CGG | - | chr6_1:67728050-67728069 | Msa0891670:three_prime_UTR | 45.0% |
| !! | ATTGGTTCGACTTCAGTCTC+GGG | - | chr6_1:67728051-67728070 | Msa0891670:three_prime_UTR | 45.0% |
| AGCAAGTCGTGTGCACATTT+CGG | - | chr6_1:67728078-67728097 | Msa0891670:three_prime_UTR | 45.0% | |
| TGCAAGAATTGGTAGGGTGA+TGG | + | chr6_1:67728606-67728625 | None:intergenic | 45.0% | |
| ! | ATGATGATGCCTACAGTTCG+AGG | - | chr6_1:67728947-67728966 | Msa0891670:CDS | 45.0% |
| ! | TGATGATGCCTACAGTTCGA+GGG | - | chr6_1:67728948-67728967 | Msa0891670:CDS | 45.0% |
| AATTTGGACCCTCGAACTGT+AGG | + | chr6_1:67728959-67728978 | None:intergenic | 45.0% | |
| ! | TGATGGATCTTCCATCCTCA+AGG | - | chr6_1:67729149-67729168 | Msa0891670:CDS | 45.0% |
| CATTTGAGCTACATCTCTGC+AGG | + | chr6_1:67729358-67729377 | None:intergenic | 45.0% | |
| ! | AACTTTGAAAGAGCCCGGTT+AGG | - | chr6_1:67729395-67729414 | Msa0891670:CDS | 45.0% |
| !!! | ATTTTTCGATGAAGCGCCGA+CGG | + | chr6_1:67729468-67729487 | None:intergenic | 45.0% |
| !! | GCTTTAGAAGAGCGTTTCGA+CGG | + | chr6_1:67729638-67729657 | None:intergenic | 45.0% |
| ! | AAATGCCTGTGGACTACTCT+CGG | + | chr6_1:67729732-67729751 | None:intergenic | 45.0% |
| ! | GAGTAGTCCACAGGCATTTT+TGG | - | chr6_1:67729733-67729752 | Msa0891670:intron | 45.0% |
| GAAGAAGCCAAAAATGCCTG+TGG | + | chr6_1:67729743-67729762 | None:intergenic | 45.0% | |
| GCTTCTTCAAGACTCGAAAG+TGG | - | chr6_1:67729755-67729774 | Msa0891670:intron | 45.0% | |
| ! | CACAAAGTGCTCCAAGACAA+AGG | - | chr6_1:67729897-67729916 | Msa0891670:intron | 45.0% |
| CTAGGTCTATTCAAGGCCTT+TGG | - | chr6_1:67729948-67729967 | Msa0891670:intron | 45.0% | |
| ! | ATTCAAGGCCTTTGGGAATC+AGG | - | chr6_1:67729956-67729975 | Msa0891670:intron | 45.0% |
| ! | TTCAAGGCCTTTGGGAATCA+GGG | - | chr6_1:67729957-67729976 | Msa0891670:intron | 45.0% |
| AGGAACCGAAAAGTGAGTGT+TGG | - | chr6_1:67730269-67730288 | Msa0891670:intron | 45.0% | |
| GGAACCGAAAAGTGAGTGTT+GGG | - | chr6_1:67730270-67730289 | Msa0891670:intron | 45.0% | |
| !! | ATATTTAATCTTTAAATATT+TGG | + | chr6_1:67728297-67728316 | None:intergenic | 5.0% |
| !!! | CTTTTTTTTTTTATTATAAA+AGG | - | chr6_1:67728521-67728540 | Msa0891670:CDS | 5.0% |
| !!! | AAAACAAAATTAAATTTTAT+AGG | - | chr6_1:67730297-67730316 | Msa0891670:intron | 5.0% |
| !!! | AAACAAAATTAAATTTTATA+GGG | - | chr6_1:67730298-67730317 | Msa0891670:intron | 5.0% |
| GAGCCCGGTTAGGTTCAAAT+TGG | - | chr6_1:67729405-67729424 | Msa0891670:CDS | 50.0% | |
| AACACATGGAGCCAAACCGT+CGG | - | chr6_1:67729449-67729468 | Msa0891670:intron | 50.0% | |
| CAAGACTCGAAAGTGGTTCG+AGG | - | chr6_1:67729762-67729781 | Msa0891670:intron | 50.0% | |
| CTGTTCAAGCTACTTGTGGC+TGG | + | chr6_1:67730025-67730044 | None:intergenic | 50.0% | |
| !! | TCGATGAAGCGCCGACGGTT+TGG | + | chr6_1:67729463-67729482 | None:intergenic | 60.0% |
| TGGACTACTCTCGGCGGTTC+GGG | + | chr6_1:67729723-67729742 | None:intergenic | 60.0% | |
| ! | GTGGACTACTCTCGGCGGTT+CGG | + | chr6_1:67729724-67729743 | None:intergenic | 60.0% |
| AACCGCCGAGAGTAGTCCAC+AGG | - | chr6_1:67729724-67729743 | Msa0891670:intron | 60.0% | |
| ! | TGCCTGTGGACTACTCTCGG+CGG | + | chr6_1:67729729-67729748 | None:intergenic | 60.0% |
| CTCGAAAGTGGTTCGAGGCG+AGG | - | chr6_1:67729767-67729786 | Msa0891670:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 67727943 | 67730607 | 67727943 | ID=Msa0891670;Name=Msa0891670 |
| chr6_1 | mRNA | 67727943 | 67730607 | 67727943 | ID=Msa0891670-mRNA-1;Parent=Msa0891670;Name=Msa0891670-mRNA-1;_AED=0.01;_eAED=0.01;_QI=88|1|1|1|1|1|3|535|296 |
| chr6_1 | exon | 67727943 | 67729188 | 67727943 | ID=Msa0891670-mRNA-1:exon:12037;Parent=Msa0891670-mRNA-1 |
| chr6_1 | exon | 67729380 | 67729448 | 67729380 | ID=Msa0891670-mRNA-1:exon:12036;Parent=Msa0891670-mRNA-1 |
| chr6_1 | exon | 67730409 | 67730607 | 67730409 | ID=Msa0891670-mRNA-1:exon:12035;Parent=Msa0891670-mRNA-1 |
| chr6_1 | five_prime_UTR | 67730520 | 67730607 | 67730520 | ID=Msa0891670-mRNA-1:five_prime_utr;Parent=Msa0891670-mRNA-1 |
| chr6_1 | CDS | 67730409 | 67730519 | 67730409 | ID=Msa0891670-mRNA-1:cds;Parent=Msa0891670-mRNA-1 |
| chr6_1 | CDS | 67729380 | 67729448 | 67729380 | ID=Msa0891670-mRNA-1:cds;Parent=Msa0891670-mRNA-1 |
| chr6_1 | CDS | 67728478 | 67729188 | 67728478 | ID=Msa0891670-mRNA-1:cds;Parent=Msa0891670-mRNA-1 |
| chr6_1 | three_prime_UTR | 67727943 | 67728477 | 67727943 | ID=Msa0891670-mRNA-1:three_prime_utr;Parent=Msa0891670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
