AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259430 MtrunA17_Chr8g0377281 33.152 552 262 17 79 553 1 522 2.34e-68 231
Msa0259430 MtrunA17_Chr5g0429061 30.867 473 254 16 141 603 4 413 1.16e-51 183
Msa0259430 MtrunA17_Chr4g0042681 39.098 133 66 4 472 603 2 120 5.23e-20 87.0
Msa0259430 MtrunA17_Chr4g0042291 34.286 140 85 2 192 331 9 141 1.43e-17 82.0
Msa0259430 MtrunA17_Chr8g0352961 33.099 142 85 5 466 606 171 303 1.78e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259430 AT1G08300.3 35.200 125 71 2 474 598 489 603 1.23e-15 80.9
Msa0259430 AT1G08300.1 35.833 120 67 2 479 598 586 695 1.26e-15 80.9
Msa0259430 AT1G08300.2 35.200 125 71 2 474 598 527 641 1.37e-15 80.9
Msa0259430 AT4G13750.1 34.646 127 69 3 474 598 2600 2714 2.05e-13 74.3

Find 148 sgRNAs with CRISPR-Local

Find 446 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACTAAAACCGGATTTA+TGG 0.127288 2_2:-56422514 Msa0259430:CDS
CTGGTAGACATTGTTAATTC+TGG 0.197367 2_2:-56419503 Msa0259430:CDS
CACAAGGAATGATCTCTTTC+AGG 0.211115 2_2:-56418322 Msa0259430:intron
ACAGACTGGTTCTATTATTT+AGG 0.215828 2_2:+56417101 Msa0259420:CDS
TTCGATCCGGCTTCAGATTC+AGG 0.238932 2_2:-56422475 Msa0259430:CDS
GAAGAGGAAGCTAGGATAAT+TGG 0.240454 2_2:-56418718 Msa0259430:CDS
TGTCTCAGTTGTGCTACTTT+TGG 0.250356 2_2:+56417135 Msa0259420:CDS
TCCAGAATATATCTTTGTTC+AGG 0.252267 2_2:+56419561 None:intergenic
GGCATGTTTCGAAAGTAAAT+TGG 0.268301 2_2:-56416852 Msa0259430:three_prime_UTR
TTTCACTTAATTGGTAGTTT+TGG 0.277014 2_2:-56419413 Msa0259430:CDS
AAACAAACTTTCTTCTTTCC+TGG 0.281721 2_2:+56418856 None:intergenic
ATATTCGGGACCTTTATATT+TGG 0.283338 2_2:+56418657 None:intergenic
ACCGGATTTATGGATCATTC+TGG 0.290368 2_2:-56422504 Msa0259430:CDS
GCAAAGCTTTCTGCAATATC+TGG 0.298861 2_2:-56419234 Msa0259430:CDS
AAGATTTCGACCTTTATATT+CGG 0.302596 2_2:+56418642 None:intergenic
TATATTCTGGAAGGGCTTAC+TGG 0.304715 2_2:-56419549 Msa0259430:CDS
TTCGAACGTGATGATGATTC+AGG 0.328805 2_2:+56422957 None:intergenic
GTTTCTTGAAATAATGTATT+GGG 0.338645 2_2:-56422870 Msa0259430:CDS
TGAGAACAATGGTTTGATTT+CGG 0.347269 2_2:+56423005 None:intergenic
CCCTGAACAAAGATATATTC+TGG 0.350481 2_2:-56419562 Msa0259430:CDS
AGCTAGGATAATTGGGGAAA+TGG 0.350485 2_2:-56418710 Msa0259430:CDS
AGTTCACCGCCTTCTTTAAG+AGG 0.359644 2_2:+56418367 None:intergenic
TCATCTGGCACCATTGATAT+CGG 0.360756 2_2:-56422812 Msa0259430:CDS
TTCTGTTATCTCAGCATTGC+CGG 0.365599 2_2:+56417074 Msa0259420:intron
TTGACCCATGTTTCCTTTGA+GGG 0.366663 2_2:-56423104 Msa0259430:five_prime_UTR
TTGTGATATGTGCAGATATT+TGG 0.367508 2_2:-56419606 Msa0259430:intron
CCTTTGAGGGATCAAATATT+CGG 0.373168 2_2:-56423091 Msa0259430:five_prime_UTR
ATTTAACCCTTGAACGTGTA+AGG 0.373326 2_2:-56419328 Msa0259430:CDS
CCGGATTTATGGATCATTCT+GGG 0.380166 2_2:-56422503 Msa0259430:CDS
AAGAGGAAGCTAGGATAATT+GGG 0.380292 2_2:-56418717 Msa0259430:CDS
TGAACTCAGTAAATCTCTTC+AGG 0.385444 2_2:-56419069 Msa0259430:CDS
GTGAAGTCCACCTCTGTGTT+AGG 0.391868 2_2:-56418529 Msa0259430:CDS
CCAGAATATATCTTTGTTCA+GGG 0.395159 2_2:+56419562 None:intergenic
TTTGATTTCGGCGGTGGTGA+GGG 0.397809 2_2:+56423017 None:intergenic
CAAGTTTGTCAAACTAAAAC+CGG 0.401162 2_2:-56422522 Msa0259430:CDS
GTTGACCCATGTTTCCTTTG+AGG 0.404728 2_2:-56423105 Msa0259430:five_prime_UTR
GCATGGATCTTCTTCGTGAC+AGG 0.413780 2_2:+56419014 None:intergenic
GCTAAGTCACGCTTTACAAC+TGG 0.414993 2_2:-56419384 Msa0259430:CDS
TATACTGGTTTAAGAAGAAA+AGG 0.418063 2_2:-56422308 Msa0259430:CDS
GCTAGGATAATTGGGGAAAT+GGG 0.419177 2_2:-56418709 Msa0259430:CDS
CAAATTCCCTTACACGTTCA+AGG 0.423738 2_2:+56419321 None:intergenic
AGTTTACTCTGAAGGTGGTC+TGG 0.427036 2_2:-56416918 Msa0259430:three_prime_UTR
ACACAGTTGAAACTGTCCTT+TGG 0.427360 2_2:-56422675 Msa0259430:CDS
ACTTACAATTATTCGAGAAA+AGG 0.428503 2_2:-56422699 Msa0259430:CDS
AGTTTCTTGAAATAATGTAT+TGG 0.429668 2_2:-56422871 Msa0259430:CDS
GCTTACTGGATCATTGTAAA+GGG 0.433979 2_2:-56419535 Msa0259430:CDS
GCACAAATCGTAAGCGTGTC+CGG 0.434647 2_2:+56418588 None:intergenic
AGATTTCGACCTTTATATTC+GGG 0.436578 2_2:+56418643 None:intergenic
CTTACAATTATTCGAGAAAA+GGG 0.436985 2_2:-56422698 Msa0259430:CDS
TATTTCACCACCAAATATAA+AGG 0.438180 2_2:-56418667 Msa0259430:CDS
TTTAGCAGATTCATACTCGT+TGG 0.439544 2_2:+56418483 None:intergenic
TTCGGGACCTTTATATTTGG+TGG 0.444079 2_2:+56418660 None:intergenic
GTTTGATTTCGGCGGTGGTG+AGG 0.446319 2_2:+56423016 None:intergenic
TACATTGCGATCTTGAAGAT+TGG 0.447848 2_2:-56416873 Msa0259430:three_prime_UTR
TCAACCTATTTGCTTCCATA+CGG 0.452181 2_2:+56417040 Msa0259420:intron
TATAAAGGTCCCGAATATAA+AGG 0.452744 2_2:-56418652 Msa0259430:CDS
AAAGAAGAAAGTTTGTTTCA+CGG 0.453031 2_2:-56418851 Msa0259430:CDS
GAGCCCGTATGGAAGCAAAT+AGG 0.454008 2_2:-56417044 Msa0259430:three_prime_UTR
CAATGGTTTGATTTCGGCGG+TGG 0.460993 2_2:+56423011 None:intergenic
GTCGAAATCTTGTAGTTCGT+TGG 0.461479 2_2:-56418630 Msa0259430:CDS
ATGGTGTATCTGATTCTAGA+TGG 0.465984 2_2:-56422224 Msa0259430:CDS
TCACGACTGAATTCCTCAAC+CGG 0.467175 2_2:+56418984 None:intergenic
TTAGCAGATTCATACTCGTT+GGG 0.467301 2_2:+56418484 None:intergenic
ATATTTGGTAGAGGCTAGTA+AGG 0.468582 2_2:-56419591 Msa0259430:CDS
AGTTACAGCAATTAACCTAA+AGG 0.470648 2_2:-56422613 Msa0259430:CDS
ATTCTGGGGCTGTTTCGATC+CGG 0.473632 2_2:-56422488 Msa0259430:CDS
TTATCACATCAGAAAATACT+TGG 0.477131 2_2:+56422280 None:intergenic
AATTATCCTAGCTTCCTCTT+CGG 0.481527 2_2:+56418720 None:intergenic
TGAACGTGTAAGGGAATTTG+AGG 0.486946 2_2:-56419318 Msa0259430:CDS
CGATGGAAAGAATGAATAGT+AGG 0.488512 2_2:+56422348 None:intergenic
ACTTGTTTAGTTTACTCTGA+AGG 0.490973 2_2:-56416926 Msa0259430:three_prime_UTR
CAACCTATTTGCTTCCATAC+GGG 0.491149 2_2:+56417041 Msa0259420:intron
TTCCTTGTGGCAGCGTGTCA+TGG 0.492096 2_2:+56418336 None:intergenic
TTGATTTCGGCGGTGGTGAG+GGG 0.492741 2_2:+56423018 None:intergenic
ATTTCTGTTGGTGATGGAAA+AGG 0.497146 2_2:-56419164 Msa0259430:CDS
CCTGGTGTAGGTTTATCATC+TGG 0.498426 2_2:-56422827 Msa0259430:CDS
GAGGAGCGTCTGTTAAAGAA+TGG 0.502186 2_2:-56419299 Msa0259430:CDS
TTATTATCAATTTAGAGAGC+AGG 0.502362 2_2:-56418913 Msa0259430:CDS
ACATATGACAAGTGCAAGAA+TGG 0.503437 2_2:-56422243 Msa0259430:CDS
TATGTTAATCCTCTTAAAGA+AGG 0.505717 2_2:-56418376 Msa0259430:CDS
CTAGGAAGACTGTGATATGC+TGG 0.507650 2_2:+56416990 Msa0259420:intron
GGCTTACTGGATCATTGTAA+AGG 0.509130 2_2:-56419536 Msa0259430:CDS
ATAGAACCAGTCTGTCTGTC+CGG 0.509429 2_2:-56417093 Msa0259430:three_prime_UTR
CCCAGAATGATCCATAAATC+CGG 0.511922 2_2:+56422503 None:intergenic
AGAAGAGCAGAGAGCCCGTA+TGG 0.514152 2_2:-56417055 Msa0259430:three_prime_UTR
AAATTCCCTTACACGTTCAA+GGG 0.524065 2_2:+56419322 None:intergenic
AAGACTGTGATATGCTGGCT+CGG 0.524579 2_2:+56416995 Msa0259420:intron
GAGTGATGAAGACGAGGACA+AGG 0.525119 2_2:-56422894 Msa0259430:CDS
AGTAAAGATGTTACTAAAGG+TGG 0.525699 2_2:-56422567 Msa0259430:CDS
TTAAGTAAAGATGTTACTAA+AGG 0.532899 2_2:-56422570 Msa0259430:CDS
TAAAATCCGAAGAGGAAGCT+AGG 0.534245 2_2:-56418726 Msa0259430:CDS
TGGACTTGATCAGAGTAAGC+TGG 0.537397 2_2:-56422655 Msa0259430:CDS
TTTAACCCTTGAACGTGTAA+GGG 0.538674 2_2:-56419327 Msa0259430:CDS
GGATAAGAATGGTGGAGAAG+AGG 0.540568 2_2:+56423039 None:intergenic
TATGGAAGCAAATAGGTTGA+AGG 0.541904 2_2:-56417037 Msa0259430:three_prime_UTR
ATAGGTTGAAGGCACTAGAA+AGG 0.545276 2_2:-56417026 Msa0259430:three_prime_UTR
GAACAAAGATATATTCTGGA+AGG 0.545629 2_2:-56419558 Msa0259430:CDS
TCGAACGTGATGATGATTCA+GGG 0.545699 2_2:+56422958 None:intergenic
TTACAATGAATATCAAAGCT+AGG 0.548001 2_2:+56416972 Msa0259420:intron
TTGATCCCTCAAAGGAAACA+TGG 0.550023 2_2:+56423099 None:intergenic
TAGAAAAGAAGATCTCTGAA+TGG 0.552570 2_2:-56418959 Msa0259430:CDS
GCATTGCCGGACAGACAGAC+TGG 0.552928 2_2:+56417087 Msa0259420:intron
TGTTTAGTTTACTCTGAAGG+TGG 0.553504 2_2:-56416923 Msa0259430:three_prime_UTR
GTCTGGCCTGAATCTGAAGC+CGG 0.554342 2_2:+56422469 None:intergenic
TCATCTTGTTTAGTATCACT+CGG 0.556149 2_2:+56419089 None:intergenic
ATTCTTGCACTTGTCATATG+TGG 0.556411 2_2:+56422245 None:intergenic
ACAATGATTCGTCCTGGTGT+AGG 0.558027 2_2:-56422839 Msa0259430:CDS
ATGAATGAACATAGAGAAGC+CGG 0.559260 2_2:-56418607 Msa0259430:CDS
CCTCAACCGGGTATTCTGCA+TGG 0.560403 2_2:+56418997 None:intergenic
TTGATATCGGAGACTCACTC+TGG 0.563655 2_2:-56422799 Msa0259430:intron
TGTTTCGAAAGTAAATTGGT+TGG 0.564878 2_2:-56416848 Msa0259430:three_prime_UTR
ACGTTCGAACTTTCATTAAG+CGG 0.566053 2_2:-56422943 Msa0259430:CDS
TTATCAATTTAGAGAGCAGG+AGG 0.570189 2_2:-56418910 Msa0259430:CDS
CCATGCAGAATACCCGGTTG+AGG 0.572308 2_2:-56418997 Msa0259430:CDS
TGCTGATTATATTGCTGACC+AGG 0.574125 2_2:-56418874 Msa0259430:CDS
GAGTGAGTCTCCGATATCAA+TGG 0.576084 2_2:+56422802 None:intergenic
AGACTGTGATATGCTGGCTC+GGG 0.576249 2_2:+56416996 Msa0259420:intron
TGGTGTATCTGATTCTAGAT+GGG 0.576882 2_2:-56422223 Msa0259430:CDS
ACTGCAGTCTAAAATGTCGA+TGG 0.581323 2_2:+56422331 None:intergenic
CGACTCCATGTTGAGAACAA+TGG 0.581355 2_2:+56422994 None:intergenic
CTTGCACTTGTCATATGTGG+TGG 0.581725 2_2:+56422248 None:intergenic
TCTGTTGGTGATGGAAAAGG+TGG 0.587056 2_2:-56419161 Msa0259430:CDS
CCGAATATTTGATCCCTCAA+AGG 0.589729 2_2:+56423091 None:intergenic
CGGTGGTGAGGGGATAAGAA+TGG 0.591327 2_2:+56423028 None:intergenic
TGGTGAGGGGATAAGAATGG+TGG 0.593787 2_2:+56423031 None:intergenic
GAAGATCCATGCAGAATACC+CGG 0.595291 2_2:-56419003 Msa0259430:CDS
GTCCATGACACGCTGCCACA+AGG 0.600014 2_2:-56418338 Msa0259430:CDS
AACAAAGATATATTCTGGAA+GGG 0.601862 2_2:-56419557 Msa0259430:CDS
CGGATTTATGGATCATTCTG+GGG 0.606729 2_2:-56422502 Msa0259430:CDS
AAAAGCAATAAAATCCGAAG+AGG 0.611000 2_2:-56418734 Msa0259430:CDS
GAACAATGGTTTGATTTCGG+CGG 0.618979 2_2:+56423008 None:intergenic
CACGACTGAATTCCTCAACC+GGG 0.621923 2_2:+56418985 None:intergenic
TGAGCATAATCAGTGTCAGC+TGG 0.622789 2_2:+56419119 None:intergenic
CATTGTTCTCAACATGGAGT+CGG 0.625691 2_2:-56422993 Msa0259430:exon
TATGTGCAGATATTTGGTAG+AGG 0.627882 2_2:-56419600 Msa0259430:intron
CCAGATGATAAACCTACACC+AGG 0.628676 2_2:+56422827 None:intergenic
TGTTCTCAACATGGAGTCGG+AGG 0.631682 2_2:-56422990 Msa0259430:exon
GATGAAACAATGATTCGTCC+TGG 0.633484 2_2:-56422845 Msa0259430:CDS
TGATCCCTCAAAGGAAACAT+GGG 0.635142 2_2:+56423100 None:intergenic
TCAAACCATTGTTCTCAACA+TGG 0.639623 2_2:-56422999 Msa0259430:exon
GTTAATCCTCTTAAAGAAGG+CGG 0.650825 2_2:-56418373 Msa0259430:CDS
AGAGGAAGCTAGGATAATTG+GGG 0.665856 2_2:-56418716 Msa0259430:CDS
CTTACTGGATCATTGTAAAG+GGG 0.672451 2_2:-56419534 Msa0259430:CDS
TATCTGATTCTAGATGGGAA+AGG 0.684143 2_2:-56422218 Msa0259430:intron
TGAATCTGCTAAAGAGAACG+AGG 0.685092 2_2:-56418473 Msa0259430:CDS
CTGAAAGAGATCATTCCTTG+TGG 0.685594 2_2:+56418323 None:intergenic
CTTACTCTGATCAAGTCCAA+AGG 0.698359 2_2:+56422659 None:intergenic
TCATAGGAGTGATGAAGACG+AGG 0.701379 2_2:-56422900 Msa0259430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAATTAAGAAAATATAAA+CGG + chr2_2:56417165-56417184 Msa0259420:CDS 10.0%
!!! TTATTTTATTTTTTTGTTGT+TGG - chr2_2:56421159-56421178 Msa0259430:intron 10.0%
!! TCACTTTAGATAAAATTTAA+GGG - chr2_2:56418676-56418695 Msa0259430:CDS 15.0%
!! AAAAAAATTATGGGAATTTA+CGG - chr2_2:56419080-56419099 Msa0259430:CDS 15.0%
!! AAAAAAATTATGGGAATTTA+TGG - chr2_2:56419080-56419099 Msa0259430:CDS 15.0%
!!! TTGAGAAAATAATTTTTTGT+TGG - chr2_2:56420026-56420045 Msa0259430:intron 15.0%
!!! TGAGAAAATAATTTTTTGTT+GGG - chr2_2:56420027-56420046 Msa0259430:intron 15.0%
!! TTCACTTTAATAAAAATCTT+GGG + chr2_2:56421388-56421407 None:intergenic 15.0%
!!! TGTTTTTAAAATTTCAATCT+TGG - chr2_2:56422417-56422436 Msa0259430:intron 15.0%
!! AGTTTCTTGAAATAATGTAT+TGG - chr2_2:56417061-56417080 Msa0259430:three_prime_UTR 20.0%
!! GTTTCTTGAAATAATGTATT+GGG - chr2_2:56417062-56417081 Msa0259430:three_prime_UTR 20.0%
!! TTAAGTAAAGATGTTACTAA+AGG - chr2_2:56417362-56417381 Msa0259430:intron 20.0%
!! CAAAATTATATCTCAACTTA+CGG + chr2_2:56417488-56417507 Msa0259420:intron 20.0%
!! ATCTAACTCTATTAATCTAA+AGG - chr2_2:56417906-56417925 Msa0259430:intron 20.0%
!! TCTAACTCTATTAATCTAAA+GGG - chr2_2:56417907-56417926 Msa0259430:intron 20.0%
!!! AGTGTCTAATTTAAAACTAT+AGG - chr2_2:56417967-56417986 Msa0259430:intron 20.0%
!!! GTGTCTAATTTAAAACTATA+GGG - chr2_2:56417968-56417987 Msa0259430:intron 20.0%
!!! TGTCTAATTTAAAACTATAG+GGG - chr2_2:56417969-56417988 Msa0259430:intron 20.0%
!!! TTCATCTTTTTAATATTGCT+TGG - chr2_2:56418387-56418406 Msa0259430:CDS 20.0%
!!! TCATCTTTTTAATATTGCTT+GGG - chr2_2:56418388-56418407 Msa0259430:CDS 20.0%
!!! AGTTTGAGAAAATAATTTGT+TGG - chr2_2:56418540-56418559 Msa0259430:CDS 20.0%
!!! GTTTGAGAAAATAATTTGTT+GGG - chr2_2:56418541-56418560 Msa0259430:CDS 20.0%
!!! GTCACTTTAGATAAAATTTA+AGG - chr2_2:56418675-56418694 Msa0259430:CDS 20.0%
!! TCACAATGAATTATTTACAT+AGG + chr2_2:56418875-56418894 None:intergenic 20.0%
!!! AACAAAGTTTTATAATACCA+TGG + chr2_2:56419022-56419041 None:intergenic 20.0%
!! TTGTAGACTCAAAAAAATTA+TGG - chr2_2:56419070-56419089 Msa0259430:CDS 20.0%
!! TGTAGACTCAAAAAAATTAT+GGG - chr2_2:56419071-56419090 Msa0259430:CDS 20.0%
!!! TTCATCTTTTTAATATTGCT+TGG - chr2_2:56418387-56418406 Msa0259430:CDS 20.0%
!!! TCATCTTTTTAATATTGCTT+GGG - chr2_2:56418388-56418407 Msa0259430:CDS 20.0%
!!! TTGAGAAAATAATGTTTTGT+TGG - chr2_2:56419262-56419281 Msa0259430:CDS 20.0%
!!! TGAGAAAATAATGTTTTGTT+GGG - chr2_2:56419263-56419282 Msa0259430:CDS 20.0%
!! ATCTAACTCTATTAATCTAA+AGG - chr2_2:56417906-56417925 Msa0259430:intron 20.0%
!! TCTAACTCTATTAATCTAAA+GGG - chr2_2:56417907-56417926 Msa0259430:intron 20.0%
!! TCTCTTAAATCTTATCTTAA+GGG + chr2_2:56419423-56419442 None:intergenic 20.0%
!!! AGTGTCTAATTTAAAACTAT+AGG - chr2_2:56417967-56417986 Msa0259430:intron 20.0%
!!! GTGTCTAATTTAAAACTATA+GGG - chr2_2:56417968-56417987 Msa0259430:intron 20.0%
!!! TGTCTAATTTAAAACTATAG+GGG - chr2_2:56417969-56417988 Msa0259430:intron 20.0%
!! TCACATTGAATTATTTACAT+AGG + chr2_2:56419639-56419658 None:intergenic 20.0%
!!! AACAAAGTTTTATAATACCA+TGG + chr2_2:56419022-56419041 None:intergenic 20.0%
!! TTGTAGACTCAAAAAAATTA+TGG - chr2_2:56419070-56419089 Msa0259430:CDS 20.0%
!! TGTAGACTCAAAAAAATTAT+GGG - chr2_2:56419071-56419090 Msa0259430:CDS 20.0%
!!! GTCACTTTAGATAAAATTTA+AGG - chr2_2:56418675-56418694 Msa0259430:CDS 20.0%
!!! CTTTAGATAAAATTTAAGGT+AGG - chr2_2:56420180-56420199 Msa0259430:intron 20.0%
!! TGTCTAATTGAAAACTATAA+GGG - chr2_2:56420206-56420225 Msa0259430:intron 20.0%
!!! TGCTTTTTAAGAAAATTTCA+AGG - chr2_2:56420236-56420255 Msa0259430:intron 20.0%
!!! GCTTTTTAAGAAAATTTCAA+GGG - chr2_2:56420237-56420256 Msa0259430:intron 20.0%
!!! AAAGATGATTTTCACTTAAT+TGG - chr2_2:56420510-56420529 Msa0259430:intron 20.0%
!!! GGTAAAAAAAATATTTCTGT+TGG - chr2_2:56420756-56420775 Msa0259430:intron 20.0%
!!! TTTTAAACATTCATTGTACA+AGG + chr2_2:56420898-56420917 None:intergenic 20.0%
!!! TTTTATTGCTTTTTTTTCTC+CGG + chr2_2:56421191-56421210 None:intergenic 20.0%
!! CTTCACTTTAATAAAAATCT+TGG + chr2_2:56421389-56421408 None:intergenic 20.0%
!! TCACTAAATAGAAGTTATAA+TGG + chr2_2:56422664-56422683 None:intergenic 20.0%
!!! TCATTTTCTGAGTTTAAATA+TGG - chr2_2:56423123-56423142 Msa0259430:five_prime_UTR 20.0%
! ACTTACAATTATTCGAGAAA+AGG - chr2_2:56417233-56417252 Msa0259430:intron 25.0%
! CTTACAATTATTCGAGAAAA+GGG - chr2_2:56417234-56417253 Msa0259430:intron 25.0%
! AAATCAATCATAAGAAAACG+CGG + chr2_2:56417542-56417561 Msa0259420:intron 25.0%
!!! TATACTGGTTTAAGAAGAAA+AGG - chr2_2:56417624-56417643 Msa0259430:intron 25.0%
! TTATCACATCAGAAAATACT+TGG + chr2_2:56417655-56417674 Msa0259420:intron 25.0%
! CTAACTCTATTAATCTAAAG+GGG - chr2_2:56417908-56417927 Msa0259430:intron 25.0%
! TCGCTTAAATCTTATCTTAA+GGG + chr2_2:56417943-56417962 Msa0259420:CDS 25.0%
!! GTCTAATTTAAAACTATAGG+GGG - chr2_2:56417970-56417989 Msa0259430:intron 25.0%
! TCACATTGAATTATTTACGT+AGG + chr2_2:56418157-56418176 None:intergenic 25.0%
! TGATTGAAACTAGAACAAAT+TGG - chr2_2:56418228-56418247 Msa0259430:intron 25.0%
!!! AACCAAGTTTTATAATACCA+TGG + chr2_2:56418304-56418323 None:intergenic 25.0%
! ATCATAAAACATGTTCAAGT+AGG + chr2_2:56418502-56418521 None:intergenic 25.0%
! CTTTAGATAAAATTTAAGGG+TGG - chr2_2:56418679-56418698 Msa0259430:CDS 25.0%
! AGTGTCTAATTGAAAACTAT+AGG - chr2_2:56418704-56418723 Msa0259430:CDS 25.0%
! GTGTCTAATTGAAAACTATA+GGG - chr2_2:56418705-56418724 Msa0259430:CDS 25.0%
! TGTCTAATTGAAAACTATAG+GGG - chr2_2:56418706-56418725 Msa0259430:CDS 25.0%
! AATTATTTACATAGGTAGTG+TGG + chr2_2:56418867-56418886 None:intergenic 25.0%
! CTAACTCTATTAATCTAAAG+GGG - chr2_2:56417908-56417927 Msa0259430:intron 25.0%
! CTCTCTTAAATCTTATCTTA+AGG + chr2_2:56419424-56419443 None:intergenic 25.0%
! CTTAAGATAAGATTTAAGAG+AGG - chr2_2:56419422-56419441 Msa0259430:CDS 25.0%
!! GTCTAATTTAAAACTATAGG+GGG - chr2_2:56417970-56417989 Msa0259430:intron 25.0%
! AATTATTTACATAGGTAGTG+TGG + chr2_2:56418867-56418886 None:intergenic 25.0%
! TTCATCTTCTTAATATTGCT+TGG - chr2_2:56419869-56419888 Msa0259430:intron 25.0%
! TCATCTTCTTAATATTGCTT+GGG - chr2_2:56419870-56419889 Msa0259430:intron 25.0%
! GTGTTCAAATGTAAAATACT+CGG + chr2_2:56419963-56419982 None:intergenic 25.0%
! ATCATAAAACATGTTCAAGT+AGG + chr2_2:56418502-56418521 None:intergenic 25.0%
! ATCTAACTCTGTTAATCTAA+AGG - chr2_2:56420144-56420163 Msa0259430:intron 25.0%
! TCTAACTCTGTTAATCTAAA+GGG - chr2_2:56420145-56420164 Msa0259430:intron 25.0%
! GTGTCTAATTGAAAACTATA+AGG - chr2_2:56418705-56418724 Msa0259430:CDS 25.0%
! GTCTAATTGAAAACTATAAG+GGG - chr2_2:56420207-56420226 Msa0259430:intron 25.0%
!!! TCATGTTTTAAATTGTGTGT+GGG - chr2_2:56420298-56420317 Msa0259430:intron 25.0%
!! AACAAAGATATATTCTGGAA+GGG - chr2_2:56420375-56420394 Msa0259430:intron 25.0%
! ATTAAAAAAGATAGTTGTGG+GGG + chr2_2:56420480-56420499 None:intergenic 25.0%
! GATTAAAAAAGATAGTTGTG+GGG + chr2_2:56420481-56420500 None:intergenic 25.0%
! CGATTAAAAAAGATAGTTGT+GGG + chr2_2:56420482-56420501 None:intergenic 25.0%
! TCGATTAAAAAAGATAGTTG+TGG + chr2_2:56420483-56420502 None:intergenic 25.0%
!!! TTTCACTTAATTGGTAGTTT+TGG - chr2_2:56420519-56420538 Msa0259430:intron 25.0%
!! TACTGTTGATGAAAAAACAT+TGG + chr2_2:56420671-56420690 None:intergenic 25.0%
!! AAAAATATTTCTGTTGGTGA+TGG - chr2_2:56420762-56420781 Msa0259430:intron 25.0%
! TTATTATCAATTTAGAGAGC+AGG - chr2_2:56421019-56421038 Msa0259430:intron 25.0%
!! AAAGAAGAAAGTTTGTTTCA+CGG - chr2_2:56421081-56421100 Msa0259430:intron 25.0%
!!! TATTTTTTTGTTGTTGGTGT+AGG - chr2_2:56421165-56421184 Msa0259430:intron 25.0%
! TATTTCACCACCAAATATAA+AGG - chr2_2:56421265-56421284 Msa0259430:intron 25.0%
! AAGATTTCGACCTTTATATT+CGG + chr2_2:56421293-56421312 None:intergenic 25.0%
! TATGTTAATCCTCTTAAAGA+AGG - chr2_2:56421556-56421575 Msa0259430:intron 25.0%
! AGGTATGTTGATATCTTATT+CGG - chr2_2:56421630-56421649 Msa0259430:intron 25.0%
! TTTGAGTAATCTGAATTGTT+TGG - chr2_2:56421756-56421775 Msa0259430:intron 25.0%
! AATACCAAACAACAGAAAAA+TGG - chr2_2:56422261-56422280 Msa0259430:CDS 25.0%
! AGAAAAATGGATGAAAGAAA+TGG - chr2_2:56422274-56422293 Msa0259430:CDS 25.0%
! TGTTGAAAAACTTAAGATAC+AGG - chr2_2:56422441-56422460 Msa0259430:intron 25.0%
! TAACTGGATAAATAAGAAAC+TGG - chr2_2:56422495-56422514 Msa0259430:CDS 25.0%
!! ACAAAAATCACATTTTGCAT+GGG + chr2_2:56422766-56422785 None:intergenic 25.0%
! TTACAATGAATATCAAAGCT+AGG + chr2_2:56422963-56422982 None:intergenic 25.0%
! TGAGAACAATGGTTTGATTT+CGG + chr2_2:56416930-56416949 Msa0259420:intron 30.0%
AGTTACAGCAATTAACCTAA+AGG - chr2_2:56417319-56417338 Msa0259430:intron 30.0%
!! GCAATTTTGAAGAATCCTTT+AGG + chr2_2:56417337-56417356 Msa0259420:intron 30.0%
AGTAAAGATGTTACTAAAGG+TGG - chr2_2:56417365-56417384 Msa0259430:intron 30.0%
!!! GTTTTAGTTTGACAAACTTG+TGG + chr2_2:56417410-56417429 Msa0259420:intron 30.0%
CAAGTTTGTCAAACTAAAAC+CGG - chr2_2:56417410-56417429 Msa0259430:intron 30.0%
TCAAACTAAAACCGGATTTA+TGG - chr2_2:56417418-56417437 Msa0259430:intron 30.0%
! ATTTTAGACTGCAGTTATAC+TGG - chr2_2:56417609-56417628 Msa0259430:intron 30.0%
!! TGTCTTTAGTTTGACTTGTT+GGG - chr2_2:56417775-56417794 Msa0259430:intron 30.0%
AAGTTGGAGAATGAAAGAAA+TGG - chr2_2:56417803-56417822 Msa0259430:intron 30.0%
CTCGCTTAAATCTTATCTTA+AGG + chr2_2:56417944-56417963 Msa0259420:CDS 30.0%
CTTAAGATAAGATTTAAGCG+AGG - chr2_2:56417942-56417961 Msa0259430:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+AGG - chr2_2:56418000-56418019 Msa0259430:intron 30.0%
AAAGTGAATGTGAATGACAA+TGG + chr2_2:56418110-56418129 None:intergenic 30.0%
AATTATTTACGTAGGTAGTG+TGG + chr2_2:56418149-56418168 None:intergenic 30.0%
AGAAAATAACGTTGTGATGA+TGG + chr2_2:56418182-56418201 None:intergenic 30.0%
AATACCATGGTGAAATATCT+CGG + chr2_2:56418291-56418310 None:intergenic 30.0%
CACCATGGTATTATAAAACT+TGG - chr2_2:56418299-56418318 Msa0259430:intron 30.0%
GTCGTAGACTCAAAATTTAT+GGG - chr2_2:56418351-56418370 Msa0259430:CDS 30.0%
! TCTTTTTAATATTGCTTGGG+AGG - chr2_2:56418391-56418410 Msa0259430:CDS 30.0%
! CTTTTTAATATTGCTTGGGA+GGG - chr2_2:56418392-56418411 Msa0259430:CDS 30.0%
GTGTTCGAATGTAAAATACT+CGG + chr2_2:56418480-56418499 None:intergenic 30.0%
!! AATTTGTTGGGTTCTAAAGT+TGG - chr2_2:56418553-56418572 Msa0259430:CDS 30.0%
GTCTAATTGAAAACTATAGG+GGG - chr2_2:56418707-56418726 Msa0259430:CDS 30.0%
!! TGCTTTTTAAGAAAACCTCA+AGG - chr2_2:56417999-56418018 Msa0259430:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+GGG - chr2_2:56418000-56418019 Msa0259430:intron 30.0%
ACTCACACAAACAATTACAA+GGG + chr2_2:56418779-56418798 None:intergenic 30.0%
AGAAAATAACGTTGTGATGA+TGG + chr2_2:56418182-56418201 None:intergenic 30.0%
TATATGCAAATGACTGAAAC+TGG - chr2_2:56418936-56418955 Msa0259430:CDS 30.0%
AATACCATGGTGAAATATCT+CGG + chr2_2:56418291-56418310 None:intergenic 30.0%
! TCTTTTTAATATTGCTTGGG+AGG - chr2_2:56418391-56418410 Msa0259430:CDS 30.0%
! CTTTTTAATATTGCTTGGGA+GGG - chr2_2:56418392-56418411 Msa0259430:CDS 30.0%
CACTTGCCAATCATATTTAT+AGG - chr2_2:56419157-56419176 Msa0259430:CDS 30.0%
TTGCCAATCATATTTATAGG+CGG - chr2_2:56419160-56419179 Msa0259430:CDS 30.0%
GTGTTCGAATGTAAAATACT+CGG + chr2_2:56418480-56418499 None:intergenic 30.0%
AAGTTGGAGAATGAAAGAAA+TGG - chr2_2:56417803-56417822 Msa0259430:intron 30.0%
!! GCTTTTTAAGAAAACCTCAA+AGG - chr2_2:56418000-56418019 Msa0259430:intron 30.0%
AATTACACTTACTTCCTTTG+AGG + chr2_2:56419497-56419516 None:intergenic 30.0%
TTTCTTAATTGTGTGTGTGT+GGG - chr2_2:56418060-56418079 Msa0259430:intron 30.0%
TGTGAATGACAATAGTATCA+CGG + chr2_2:56419584-56419603 None:intergenic 30.0%
AATACCATGGTGAATAATCT+CGG + chr2_2:56419771-56419790 None:intergenic 30.0%
CTAACTCTGTTAATCTAAAG+GGG - chr2_2:56420146-56420165 Msa0259430:intron 30.0%
!! GTCATGTTTTAAATTGTGTG+TGG - chr2_2:56420297-56420316 Msa0259430:intron 30.0%
TTGTGATATGTGCAGATATT+TGG - chr2_2:56420326-56420345 Msa0259430:intron 30.0%
CCAGAATATATCTTTGTTCA+GGG + chr2_2:56420373-56420392 None:intergenic 30.0%
TCCAGAATATATCTTTGTTC+AGG + chr2_2:56420374-56420393 None:intergenic 30.0%
GAACAAAGATATATTCTGGA+AGG - chr2_2:56420374-56420393 Msa0259430:intron 30.0%
!!! CTATCTTTTTTAATCGAAGC+TGG - chr2_2:56420486-56420505 Msa0259430:intron 30.0%
!! TCATCATCCATTTTTAGATC+AGG + chr2_2:56420735-56420754 None:intergenic 30.0%
GATCTAAAAATGGATGATGA+TGG - chr2_2:56420735-56420754 Msa0259430:intron 30.0%
! TCATCTTGTTTAGTATCACT+CGG + chr2_2:56420846-56420865 None:intergenic 30.0%
TAGAAAAGAAGATCTCTGAA+TGG - chr2_2:56420973-56420992 Msa0259430:intron 30.0%
AAACAAACTTTCTTCTTTCC+TGG + chr2_2:56421079-56421098 None:intergenic 30.0%
AAAAGCAATAAAATCCGAAG+AGG - chr2_2:56421198-56421217 Msa0259430:intron 30.0%
ATATTCGGGACCTTTATATT+TGG + chr2_2:56421278-56421297 None:intergenic 30.0%
TATAAAGGTCCCGAATATAA+AGG - chr2_2:56421280-56421299 Msa0259430:intron 30.0%
AGATTTCGACCTTTATATTC+GGG + chr2_2:56421292-56421311 None:intergenic 30.0%
TGTGAGTAATCTGAATTGTT+TGG - chr2_2:56421711-56421730 Msa0259430:intron 30.0%
TAACAACACACTTCTAGATA+AGG + chr2_2:56421813-56421832 None:intergenic 30.0%
GAACTGGATGAATAAGAAAT+TGG + chr2_2:56421870-56421889 None:intergenic 30.0%
! TATTCATCCAGTTCTTTTCT+TGG - chr2_2:56421876-56421895 Msa0259430:intron 30.0%
! TTGACAGTGATAATGTGTTA+AGG - chr2_2:56422099-56422118 Msa0259430:intron 30.0%
!! TCATCCATTTTTCTGTTGTT+TGG + chr2_2:56422268-56422287 None:intergenic 30.0%
GATAAACCAAATCGTAAACA+AGG - chr2_2:56422682-56422701 Msa0259430:CDS 30.0%
ATCTGATGCAAAGTTTGTAA+CGG - chr2_2:56422705-56422724 Msa0259430:intron 30.0%
! CACAAAAATCACATTTTGCA+TGG + chr2_2:56422767-56422786 None:intergenic 30.0%
!! ACAGACTGGTTCTATTATTT+AGG + chr2_2:56422834-56422853 None:intergenic 30.0%
! ACTTGTTTAGTTTACTCTGA+AGG - chr2_2:56423006-56423025 Msa0259430:five_prime_UTR 30.0%
TGTTTCGAAAGTAAATTGGT+TGG - chr2_2:56423084-56423103 Msa0259430:five_prime_UTR 30.0%
! CCTTTGAGGGATCAAATATT+CGG - chr2_2:56416841-56416860 Msa0259430:three_prime_UTR 35.0%
! TTAGGGTTTCAGGGTTTTTA+CGG + chr2_2:56416869-56416888 Msa0259420:intron 35.0%
TCAAACCATTGTTCTCAACA+TGG - chr2_2:56416933-56416952 Msa0259430:three_prime_UTR 35.0%
ACGTTCGAACTTTCATTAAG+CGG - chr2_2:56416989-56417008 Msa0259430:three_prime_UTR 35.0%
TTATATCTCAACTTACGGTC+TGG + chr2_2:56417483-56417502 Msa0259420:intron 35.0%
CGATGGAAAGAATGAATAGT+AGG + chr2_2:56417587-56417606 Msa0259420:intron 35.0%
ATTCTTGCACTTGTCATATG+TGG + chr2_2:56417690-56417709 Msa0259420:intron 35.0%
ACATATGACAAGTGCAAGAA+TGG - chr2_2:56417689-56417708 Msa0259430:intron 35.0%
ATGGTGTATCTGATTCTAGA+TGG - chr2_2:56417708-56417727 Msa0259430:intron 35.0%
TGGTGTATCTGATTCTAGAT+GGG - chr2_2:56417709-56417728 Msa0259430:intron 35.0%
TATCTGATTCTAGATGGGAA+AGG - chr2_2:56417714-56417733 Msa0259430:intron 35.0%
!! CTGTCTTTAGTTTGACTTGT+TGG - chr2_2:56417774-56417793 Msa0259430:intron 35.0%
TGGAGAATGAAAGAAATGGT+AGG - chr2_2:56417807-56417826 Msa0259430:intron 35.0%
GGAGAATGAAAGAAATGGTA+GGG - chr2_2:56417808-56417827 Msa0259430:intron 35.0%
GAGAATGAAAGAAATGGTAG+GGG - chr2_2:56417809-56417828 Msa0259430:intron 35.0%
! ATTCCATTTTCATTCACTCC+GGG + chr2_2:56417872-56417891 Msa0259420:CDS 35.0%
! CATTCCATTTTCATTCACTC+CGG + chr2_2:56417873-56417892 Msa0259420:CDS 35.0%
! TTTAAAACTATAGGGGGTGT+TGG - chr2_2:56417976-56417995 Msa0259430:intron 35.0%
AGACTCACACACAATTACAA+GGG + chr2_2:56418038-56418057 None:intergenic 35.0%
AAGACTCACACACAATTACA+AGG + chr2_2:56418039-56418058 None:intergenic 35.0%
TTCTTAATTGTGTGTGTGTG+TGG - chr2_2:56418061-56418080 Msa0259430:intron 35.0%
TCTTAATTGTGTGTGTGTGT+GGG - chr2_2:56418062-56418081 Msa0259430:intron 35.0%
CGTCGTAGACTCAAAATTTA+TGG - chr2_2:56418350-56418369 Msa0259430:CDS 35.0%
CACTTGCCAATCATATGTAT+AGG - chr2_2:56418438-56418457 Msa0259430:CDS 35.0%
TTGCCAATCATATGTATAGG+CGG - chr2_2:56418441-56418460 Msa0259430:CDS 35.0%
TGGAGAATGAGAGAAATAGT+AGG - chr2_2:56418573-56418592 Msa0259430:CDS 35.0%
GGAGAATGAGAGAAATAGTA+GGG - chr2_2:56418574-56418593 Msa0259430:CDS 35.0%
GAGAATGAGAGAAATAGTAG+GGG - chr2_2:56418575-56418594 Msa0259430:CDS 35.0%
AGAATGAGAGAAATAGTAGG+GGG - chr2_2:56418576-56418595 Msa0259430:CDS 35.0%
TGGAGTGAATGAAAATGGAA+GGG - chr2_2:56418622-56418641 Msa0259430:CDS 35.0%
GCAGCTAACGTTAATCTTAA+GGG - chr2_2:56418644-56418663 Msa0259430:CDS 35.0%
CAGCTAACGTTAATCTTAAG+GGG - chr2_2:56418645-56418664 Msa0259430:CDS 35.0%
!! TTTTAAGAAAACCTCAAGGG+AGG - chr2_2:56418740-56418759 Msa0259430:CDS 35.0%
CTCACACAAACAATTACAAG+GGG + chr2_2:56418778-56418797 None:intergenic 35.0%
GACTCACACAAACAATTACA+AGG + chr2_2:56418780-56418799 None:intergenic 35.0%
!!! GTTTTGTTGGGTTCTAAAGT+TGG - chr2_2:56419275-56419294 Msa0259430:CDS 35.0%
TGGAGAATGAAAGAAATGGT+AGG - chr2_2:56417807-56417826 Msa0259430:intron 35.0%
GGAGAATGAAAGAAATGGTA+GGG - chr2_2:56417808-56417827 Msa0259430:intron 35.0%
GAGAATGAAAGAAATGGTAG+GGG - chr2_2:56417809-56417828 Msa0259430:intron 35.0%
! ATTCCATTTTCATTCACTCG+AGG + chr2_2:56419352-56419371 None:intergenic 35.0%
TCGAGTGAATGAAAATGGAA+TGG - chr2_2:56419351-56419370 Msa0259430:CDS 35.0%
! TTTAAAACTATAGGGGGTGT+TGG - chr2_2:56417976-56417995 Msa0259430:intron 35.0%
TGACTCACACACAATTACAA+GGG + chr2_2:56419522-56419541 None:intergenic 35.0%
ATGACTCACACACAATTACA+AGG + chr2_2:56419523-56419542 None:intergenic 35.0%
GTTTCTTAATTGTGTGTGTG+TGG - chr2_2:56418059-56418078 Msa0259430:intron 35.0%
TCTTCTTAATATTGCTTGGG+AGG - chr2_2:56419873-56419892 Msa0259430:intron 35.0%
CTTCTTAATATTGCTTGGGA+GGG - chr2_2:56419874-56419893 Msa0259430:intron 35.0%
CACTTGCCAATCATATGTAT+AGG - chr2_2:56418438-56418457 Msa0259430:CDS 35.0%
TTGCCAATCATATGTATAGG+CGG - chr2_2:56418441-56418460 Msa0259430:CDS 35.0%
!! TGGGTTCTAAAGTTGTAGAA+TGG - chr2_2:56420046-56420065 Msa0259430:intron 35.0%
!! GGGTTCTAAAGTTGTAGAAT+GGG - chr2_2:56420047-56420066 Msa0259430:intron 35.0%
AAGTTGTAGAATGGGAGAAA+TGG - chr2_2:56420055-56420074 Msa0259430:intron 35.0%
AAGCTTGGAGTGAATGAAAA+TGG - chr2_2:56420104-56420123 Msa0259430:intron 35.0%
TTGGAGTGAATGAAAATGGA+AGG - chr2_2:56420108-56420127 Msa0259430:intron 35.0%
TGGAGTGAATGAAAATGGAA+GGG - chr2_2:56418622-56418641 Msa0259430:CDS 35.0%
ACACACACACACAATTACAA+GGG + chr2_2:56420279-56420298 None:intergenic 35.0%
TATGTGCAGATATTTGGTAG+AGG - chr2_2:56420332-56420351 Msa0259430:intron 35.0%
ATATTTGGTAGAGGCTAGTA+AGG - chr2_2:56420341-56420360 Msa0259430:intron 35.0%
CCCTGAACAAAGATATATTC+TGG - chr2_2:56420370-56420389 Msa0259430:intron 35.0%
GCTTACTGGATCATTGTAAA+GGG - chr2_2:56420397-56420416 Msa0259430:intron 35.0%
CTTACTGGATCATTGTAAAG+GGG - chr2_2:56420398-56420417 Msa0259430:intron 35.0%
! TTGTAAAGGGGACTATTTTC+TGG - chr2_2:56420410-56420429 Msa0259430:intron 35.0%
CTGGTAGACATTGTTAATTC+TGG - chr2_2:56420429-56420448 Msa0259430:intron 35.0%
ATTTAACCCTTGAACGTGTA+AGG - chr2_2:56420604-56420623 Msa0259430:intron 35.0%
TTTAACCCTTGAACGTGTAA+GGG - chr2_2:56420605-56420624 Msa0259430:intron 35.0%
AAATTCCCTTACACGTTCAA+GGG + chr2_2:56420613-56420632 None:intergenic 35.0%
AGCTGAACCTGATCTAAAAA+TGG - chr2_2:56420725-56420744 Msa0259430:intron 35.0%
!! ATTTCTGTTGGTGATGGAAA+AGG - chr2_2:56420768-56420787 Msa0259430:intron 35.0%
TGAACTCAGTAAATCTCTTC+AGG - chr2_2:56420863-56420882 Msa0259430:intron 35.0%
TTATCAATTTAGAGAGCAGG+AGG - chr2_2:56421022-56421041 Msa0259430:intron 35.0%
AATTATCCTAGCTTCCTCTT+CGG + chr2_2:56421215-56421234 None:intergenic 35.0%
AAGAGGAAGCTAGGATAATT+GGG - chr2_2:56421215-56421234 Msa0259430:intron 35.0%
ATGAATGAACATAGAGAAGC+CGG - chr2_2:56421325-56421344 Msa0259430:intron 35.0%
!!! ATTTTTTCCTAACACAGAGG+TGG + chr2_2:56421413-56421432 None:intergenic 35.0%
!!! CCAATTTTTTCCTAACACAG+AGG + chr2_2:56421416-56421435 None:intergenic 35.0%
CCTCTGTGTTAGGAAAAAAT+TGG - chr2_2:56421413-56421432 Msa0259430:intron 35.0%
TTAGCAGATTCATACTCGTT+GGG + chr2_2:56421451-56421470 None:intergenic 35.0%
TTTAGCAGATTCATACTCGT+TGG + chr2_2:56421452-56421471 None:intergenic 35.0%
GTTAATCCTCTTAAAGAAGG+CGG - chr2_2:56421559-56421578 Msa0259430:intron 35.0%
! AGTGTGTTGTTAATGATGCA+AGG - chr2_2:56421821-56421840 Msa0259430:intron 35.0%
! GTGTGTTGTTAATGATGCAA+GGG - chr2_2:56421822-56421841 Msa0259430:intron 35.0%
TTAGAGACTACTAGAATGTC+TGG - chr2_2:56422570-56422589 Msa0259430:CDS 35.0%
AGGAATCTAGAGACTTAAGA+AGG + chr2_2:56422615-56422634 None:intergenic 35.0%
!! ACATGCTGACTTCATAACAA+AGG + chr2_2:56422635-56422654 None:intergenic 35.0%
! TCAGATCCTTGTTTACGATT+TGG + chr2_2:56422691-56422710 None:intergenic 35.0%
! AGTACCTTCTCTTTTATTGC+AGG - chr2_2:56422729-56422748 Msa0259430:intron 35.0%
TCAACCTATTTGCTTCCATA+CGG + chr2_2:56422895-56422914 None:intergenic 35.0%
! TATGGAAGCAAATAGGTTGA+AGG - chr2_2:56422895-56422914 Msa0259430:CDS 35.0%
! TGTTTAGTTTACTCTGAAGG+TGG - chr2_2:56423009-56423028 Msa0259430:five_prime_UTR 35.0%
TACATTGCGATCTTGAAGAT+TGG - chr2_2:56423059-56423078 Msa0259430:five_prime_UTR 35.0%
GGCATGTTTCGAAAGTAAAT+TGG - chr2_2:56423080-56423099 Msa0259430:five_prime_UTR 35.0%
! AAATGTTTTCAGCTGGGACT+TGG - chr2_2:56416804-56416823 Msa0259430:three_prime_UTR 40.0%
! AATGTTTTCAGCTGGGACTT+GGG - chr2_2:56416805-56416824 Msa0259430:three_prime_UTR 40.0%
TTGACCCATGTTTCCTTTGA+GGG - chr2_2:56416828-56416847 Msa0259430:three_prime_UTR 40.0%
TGATCCCTCAAAGGAAACAT+GGG + chr2_2:56416835-56416854 Msa0259420:intron 40.0%
TTGATCCCTCAAAGGAAACA+TGG + chr2_2:56416836-56416855 Msa0259420:intron 40.0%
CCGAATATTTGATCCCTCAA+AGG + chr2_2:56416844-56416863 Msa0259420:intron 40.0%
!!! AGAGGTGTTTTAGGGTTTCA+GGG + chr2_2:56416878-56416897 Msa0259420:intron 40.0%
!!! AAGAGGTGTTTTAGGGTTTC+AGG + chr2_2:56416879-56416898 Msa0259420:intron 40.0%
! GAACAATGGTTTGATTTCGG+CGG + chr2_2:56416927-56416946 Msa0259420:intron 40.0%
CATTGTTCTCAACATGGAGT+CGG - chr2_2:56416939-56416958 Msa0259430:three_prime_UTR 40.0%
! TCGAACGTGATGATGATTCA+GGG + chr2_2:56416977-56416996 Msa0259420:intron 40.0%
! TTCGAACGTGATGATGATTC+AGG + chr2_2:56416978-56416997 Msa0259420:intron 40.0%
!!! ATCGCAGTTTTGAGGATCAT+AGG - chr2_2:56417016-56417035 Msa0259430:three_prime_UTR 40.0%
GATGAAACAATGATTCGTCC+TGG - chr2_2:56417087-56417106 Msa0259430:three_prime_UTR 40.0%
TCATCTGGCACCATTGATAT+CGG - chr2_2:56417120-56417139 Msa0259430:three_prime_UTR 40.0%
ACACAGTTGAAACTGTCCTT+TGG - chr2_2:56417257-56417276 Msa0259430:intron 40.0%
CTTACTCTGATCAAGTCCAA+AGG + chr2_2:56417276-56417295 Msa0259420:intron 40.0%
ACCGGATTTATGGATCATTC+TGG - chr2_2:56417428-56417447 Msa0259430:intron 40.0%
CCCAGAATGATCCATAAATC+CGG + chr2_2:56417432-56417451 Msa0259420:intron 40.0%
CCGGATTTATGGATCATTCT+GGG - chr2_2:56417429-56417448 Msa0259430:intron 40.0%
CGGATTTATGGATCATTCTG+GGG - chr2_2:56417430-56417449 Msa0259430:intron 40.0%
! ACTGCAGTCTAAAATGTCGA+TGG + chr2_2:56417604-56417623 Msa0259420:intron 40.0%
!! GACTTGTTGGGTTCTAAAGT+TGG - chr2_2:56417787-56417806 Msa0259430:intron 40.0%
CGGAGTGAATGAAAATGGAA+TGG - chr2_2:56417871-56417890 Msa0259430:intron 40.0%
GGGAAATTACACTTCCTTTG+AGG + chr2_2:56418017-56418036 None:intergenic 40.0%
GACTCACACACAATTACAAG+GGG + chr2_2:56418037-56418056 None:intergenic 40.0%
ACTTCCGAGATATTTCACCA+TGG - chr2_2:56418284-56418303 Msa0259430:intron 40.0%
GAATGAGAGAAATAGTAGGG+GGG - chr2_2:56418577-56418596 Msa0259430:CDS 40.0%
AATGAGAGAAATAGTAGGGG+GGG - chr2_2:56418578-56418597 Msa0259430:CDS 40.0%
AAGCCTGGAGTGAATGAAAA+TGG - chr2_2:56418617-56418636 Msa0259430:CDS 40.0%
! CTTCCATTTTCATTCACTCC+AGG + chr2_2:56418623-56418642 None:intergenic 40.0%
CTGGAGTGAATGAAAATGGA+AGG - chr2_2:56418621-56418640 Msa0259430:CDS 40.0%
GGCAGCTAACGTTAATCTTA+AGG - chr2_2:56418643-56418662 Msa0259430:CDS 40.0%
! TTGAAAACTATAGGGGGTGT+TGG - chr2_2:56418713-56418732 Msa0259430:CDS 40.0%
ACTTCCGAGATATTTCACCA+TGG - chr2_2:56418284-56418303 Msa0259430:intron 40.0%
ATATGATTGGCAAGTGCAGA+GGG + chr2_2:56418434-56418453 None:intergenic 40.0%
AATATGATTGGCAAGTGCAG+AGG + chr2_2:56419154-56419173 None:intergenic 40.0%
GTGCCGCCTATAAATATGAT+TGG + chr2_2:56419166-56419185 None:intergenic 40.0%
AAGCCTCGAGTGAATGAAAA+TGG - chr2_2:56419346-56419365 Msa0259430:CDS 40.0%
GACTCACACACAATTACAAG+GGG + chr2_2:56418037-56418056 None:intergenic 40.0%
ACTTCCGAGATTATTCACCA+TGG - chr2_2:56419764-56419783 Msa0259430:intron 40.0%
TGTAGAATGGGAGAAATGGT+AGG - chr2_2:56420059-56420078 Msa0259430:intron 40.0%
GTAGAATGGGAGAAATGGTA+GGG - chr2_2:56420060-56420079 Msa0259430:intron 40.0%
TAGAATGGGAGAAATGGTAG+GGG - chr2_2:56420061-56420080 Msa0259430:intron 40.0%
GAGAGACAATGATTGAAGCT+TGG - chr2_2:56420089-56420108 Msa0259430:intron 40.0%
CACACACACACAATTACAAG+GGG + chr2_2:56420278-56420297 None:intergenic 40.0%
GACACACACACACAATTACA+AGG + chr2_2:56420280-56420299 None:intergenic 40.0%
! TATATTCTGGAAGGGCTTAC+TGG - chr2_2:56420383-56420402 Msa0259430:intron 40.0%
GGCTTACTGGATCATTGTAA+AGG - chr2_2:56420396-56420415 Msa0259430:intron 40.0%
CAAATTCCCTTACACGTTCA+AGG + chr2_2:56420614-56420633 None:intergenic 40.0%
TGAACGTGTAAGGGAATTTG+AGG - chr2_2:56420614-56420633 Msa0259430:intron 40.0%
GCAAAGCTTTCTGCAATATC+TGG - chr2_2:56420698-56420717 Msa0259430:intron 40.0%
! TGCTGATTATATTGCTGACC+AGG - chr2_2:56421058-56421077 Msa0259430:intron 40.0%
ACAGAATGAGTGCTTACAGT+AGG + chr2_2:56421107-56421126 None:intergenic 40.0%
!!! TTTTTGTTGTTGGTGTAGGC+CGG - chr2_2:56421169-56421188 Msa0259430:intron 40.0%
TAAAATCCGAAGAGGAAGCT+AGG - chr2_2:56421206-56421225 Msa0259430:intron 40.0%
GAAGAGGAAGCTAGGATAAT+TGG - chr2_2:56421214-56421233 Msa0259430:intron 40.0%
AGAGGAAGCTAGGATAATTG+GGG - chr2_2:56421216-56421235 Msa0259430:intron 40.0%
AGCTAGGATAATTGGGGAAA+TGG - chr2_2:56421222-56421241 Msa0259430:intron 40.0%
GCTAGGATAATTGGGGAAAT+GGG - chr2_2:56421223-56421242 Msa0259430:intron 40.0%
TTCGGGACCTTTATATTTGG+TGG + chr2_2:56421275-56421294 None:intergenic 40.0%
GTCGAAATCTTGTAGTTCGT+TGG - chr2_2:56421302-56421321 Msa0259430:intron 40.0%
TGAATCTGCTAAAGAGAACG+AGG - chr2_2:56421459-56421478 Msa0259430:intron 40.0%
CTGAAAGAGATCATTCCTTG+TGG + chr2_2:56421612-56421631 None:intergenic 40.0%
CACAAGGAATGATCTCTTTC+AGG - chr2_2:56421610-56421629 Msa0259430:intron 40.0%
CACACATCCAAGAAAAGAAC+TGG + chr2_2:56421886-56421905 None:intergenic 40.0%
AAGGTTGTTCTTCCTATGAG+AGG - chr2_2:56422118-56422137 Msa0259430:intron 40.0%
AGACATGAGGGAGTTTGAAT+CGG - chr2_2:56422210-56422229 Msa0259430:intron 40.0%
! AAAGAAATGGTGATGTCGTG+AGG - chr2_2:56422287-56422306 Msa0259430:CDS 40.0%
! CTTCGATTTGTGAATTCACG+AGG - chr2_2:56422351-56422370 Msa0259430:CDS 40.0%
GATTTGTGAATTCACGAGGA+GGG - chr2_2:56422355-56422374 Msa0259430:CDS 40.0%
! CACACATTCAAAGAAAGCAC+TGG - chr2_2:56422467-56422486 Msa0259430:intron 40.0%
!! GAAAGCACTGGATAACTAAC+TGG - chr2_2:56422479-56422498 Msa0259430:CDS 40.0%
GGTTCCTGCAATAAAAGAGA+AGG + chr2_2:56422736-56422755 None:intergenic 40.0%
!!! AGTTGTGCTACTTTTGGGAT+CGG + chr2_2:56422794-56422813 None:intergenic 40.0%
!!! GTCTCAGTTGTGCTACTTTT+GGG + chr2_2:56422799-56422818 None:intergenic 40.0%
!!! TGTCTCAGTTGTGCTACTTT+TGG + chr2_2:56422800-56422819 None:intergenic 40.0%
TTCTGTTATCTCAGCATTGC+CGG + chr2_2:56422861-56422880 None:intergenic 40.0%
CAACCTATTTGCTTCCATAC+GGG + chr2_2:56422894-56422913 None:intergenic 40.0%
!! ATAGGTTGAAGGCACTAGAA+AGG - chr2_2:56422906-56422925 Msa0259430:CDS 40.0%
GTTGACCCATGTTTCCTTTG+AGG - chr2_2:56416827-56416846 Msa0259430:three_prime_UTR 45.0%
!!! GGTGGAGAAGAGGTGTTTTA+GGG + chr2_2:56416886-56416905 Msa0259420:intron 45.0%
!!! TGGTGGAGAAGAGGTGTTTT+AGG + chr2_2:56416887-56416906 Msa0259420:intron 45.0%
! GGATAAGAATGGTGGAGAAG+AGG + chr2_2:56416896-56416915 Msa0259420:intron 45.0%
CGACTCCATGTTGAGAACAA+TGG + chr2_2:56416941-56416960 Msa0259420:intron 45.0%
! GCGGAATTATCGCAGTTTTG+AGG - chr2_2:56417008-56417027 Msa0259430:three_prime_UTR 45.0%
TCATAGGAGTGATGAAGACG+AGG - chr2_2:56417032-56417051 Msa0259430:three_prime_UTR 45.0%
ACAATGATTCGTCCTGGTGT+AGG - chr2_2:56417093-56417112 Msa0259430:three_prime_UTR 45.0%
CCAGATGATAAACCTACACC+AGG + chr2_2:56417108-56417127 Msa0259420:CDS 45.0%
CCTGGTGTAGGTTTATCATC+TGG - chr2_2:56417105-56417124 Msa0259430:three_prime_UTR 45.0%
GAGTGAGTCTCCGATATCAA+TGG + chr2_2:56417133-56417152 Msa0259420:CDS 45.0%
TTGATATCGGAGACTCACTC+TGG - chr2_2:56417133-56417152 Msa0259430:three_prime_UTR 45.0%
ACAAATGTGCAAGTGACGCA+TGG + chr2_2:56417210-56417229 Msa0259420:intron 45.0%
TGCGTCACTTGCACATTTGT+AGG - chr2_2:56417210-56417229 Msa0259430:intron 45.0%
TGGACTTGATCAGAGTAAGC+TGG - chr2_2:56417277-56417296 Msa0259430:intron 45.0%
CTTGCACTTGTCATATGTGG+TGG + chr2_2:56417687-56417706 Msa0259420:intron 45.0%
GATAGGCAATGATTGAAGCC+CGG - chr2_2:56417851-56417870 Msa0259430:intron 45.0%
AAGCCCGGAGTGAATGAAAA+TGG - chr2_2:56417866-56417885 Msa0259430:intron 45.0%
ATGATTGGCAAGTGCAGAGA+GGG + chr2_2:56418432-56418451 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+AGG + chr2_2:56418433-56418452 None:intergenic 45.0%
GTGCCGCCTATACATATGAT+TGG + chr2_2:56418447-56418466 None:intergenic 45.0%
GAGAGACAATGATTGAAGCC+TGG - chr2_2:56418602-56418621 Msa0259430:CDS 45.0%
AATTACACTCACCTCCCTTG+AGG + chr2_2:56418754-56418773 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+GGG + chr2_2:56418433-56418452 None:intergenic 45.0%
ATGATTGGCAAGTGCAGAGA+GGG + chr2_2:56418432-56418451 None:intergenic 45.0%
TATGATTGGCAAGTGCAGAG+AGG + chr2_2:56418433-56418452 None:intergenic 45.0%
GTGCCGCCTATACATATGAT+TGG + chr2_2:56418447-56418466 None:intergenic 45.0%
GCTAAGTCACGCTTTACAAC+TGG - chr2_2:56420548-56420567 Msa0259430:intron 45.0%
!! GAGGAGCGTCTGTTAAAGAA+TGG - chr2_2:56420633-56420652 Msa0259430:intron 45.0%
!! TCTGTTGGTGATGGAAAAGG+TGG - chr2_2:56420771-56420790 Msa0259430:intron 45.0%
TGAGCATAATCAGTGTCAGC+TGG + chr2_2:56420816-56420835 None:intergenic 45.0%
GAAGATCCATGCAGAATACC+CGG - chr2_2:56420929-56420948 Msa0259430:intron 45.0%
TCACGACTGAATTCCTCAAC+CGG + chr2_2:56420951-56420970 None:intergenic 45.0%
AGTTCACCGCCTTCTTTAAG+AGG + chr2_2:56421568-56421587 None:intergenic 45.0%
AGACATTGCAGAGTGTGAGA+GGG + chr2_2:56422003-56422022 None:intergenic 45.0%
GTGGGTATACAACCTCTCAT+AGG + chr2_2:56422133-56422152 None:intergenic 45.0%
! AAATCGTGGTTGATGCCACA+AGG + chr2_2:56422162-56422181 None:intergenic 45.0%
CGATTTGTGAATTCACGAGG+AGG - chr2_2:56422354-56422373 Msa0259430:CDS 45.0%
!! ACATTTTGCATGGGCTGAGA+AGG + chr2_2:56422757-56422776 None:intergenic 45.0%
ATAGAACCAGTCTGTCTGTC+CGG - chr2_2:56422839-56422858 Msa0259430:CDS 45.0%
! AAGACTGTGATATGCTGGCT+CGG + chr2_2:56422940-56422959 None:intergenic 45.0%
CTAGGAAGACTGTGATATGC+TGG + chr2_2:56422945-56422964 None:intergenic 45.0%
! AGTTTACTCTGAAGGTGGTC+TGG - chr2_2:56423014-56423033 Msa0259430:five_prime_UTR 45.0%
TGGTGAGGGGATAAGAATGG+TGG + chr2_2:56416904-56416923 Msa0259420:intron 50.0%
! TTTGATTTCGGCGGTGGTGA+GGG + chr2_2:56416918-56416937 Msa0259420:intron 50.0%
! CAATGGTTTGATTTCGGCGG+TGG + chr2_2:56416924-56416943 Msa0259420:intron 50.0%
TGTTCTCAACATGGAGTCGG+AGG - chr2_2:56416942-56416961 Msa0259430:three_prime_UTR 50.0%
GAGTGATGAAGACGAGGACA+AGG - chr2_2:56417038-56417057 Msa0259430:three_prime_UTR 50.0%
!! ATTCTGGGGCTGTTTCGATC+CGG - chr2_2:56417444-56417463 Msa0259430:intron 50.0%
TTCGATCCGGCTTCAGATTC+AGG - chr2_2:56417457-56417476 Msa0259430:intron 50.0%
CGAGAGAGAGAGAGAGAGAT+AGG - chr2_2:56417834-56417853 Msa0259430:intron 50.0%
ACATAGGTAGTGTGGCACAC+TGG + chr2_2:56418859-56418878 None:intergenic 50.0%
TGATTGGCAAGTGCAGAGAG+GGG + chr2_2:56418431-56418450 None:intergenic 50.0%
GCATGGATCTTCTTCGTGAC+AGG + chr2_2:56420921-56420940 None:intergenic 50.0%
CACGACTGAATTCCTCAACC+GGG + chr2_2:56420950-56420969 None:intergenic 50.0%
GCACAAATCGTAAGCGTGTC+CGG + chr2_2:56421347-56421366 None:intergenic 50.0%
GTGAAGTCCACCTCTGTGTT+AGG - chr2_2:56421403-56421422 Msa0259430:intron 50.0%
CAGACATTGCAGAGTGTGAG+AGG + chr2_2:56422004-56422023 None:intergenic 50.0%
!! TGTAGGGGCAGAGAAGTGTT+CGG + chr2_2:56422030-56422049 None:intergenic 50.0%
!! GCGTCAACAAGGTGTTGTAG+GGG + chr2_2:56422045-56422064 None:intergenic 50.0%
!! GGCGTCAACAAGGTGTTGTA+GGG + chr2_2:56422046-56422065 None:intergenic 50.0%
!! AGGCGTCAACAAGGTGTTGT+AGG + chr2_2:56422047-56422066 None:intergenic 50.0%
TATACCCACGCTCTTCCTTG+TGG - chr2_2:56422144-56422163 Msa0259430:intron 50.0%
GGCATCAACCACGATTTCGT+CGG - chr2_2:56422165-56422184 Msa0259430:intron 50.0%
TGTAGTCTCCGACGAAATCG+TGG + chr2_2:56422176-56422195 None:intergenic 50.0%
GATTTCGTCGGAGACTACAG+CGG - chr2_2:56422177-56422196 Msa0259430:intron 50.0%
GGTGGAGGTAGAAGACATGA+GGG - chr2_2:56422198-56422217 Msa0259430:intron 50.0%
GCATATCGACGGCGACAAAA+CGG - chr2_2:56422312-56422331 Msa0259430:CDS 50.0%
AACTGGAGCAGATCTGCACT+CGG - chr2_2:56422512-56422531 Msa0259430:CDS 50.0%
GAGCCCGTATGGAAGCAAAT+AGG - chr2_2:56422888-56422907 Msa0259430:CDS 50.0%
!! AGACTGTGATATGCTGGCTC+GGG + chr2_2:56422939-56422958 None:intergenic 50.0%
CGGTGGTGAGGGGATAAGAA+TGG + chr2_2:56416907-56416926 Msa0259420:intron 55.0%
TTGATTTCGGCGGTGGTGAG+GGG + chr2_2:56416917-56416936 Msa0259420:intron 55.0%
! GTTTGATTTCGGCGGTGGTG+AGG + chr2_2:56416919-56416938 Msa0259420:intron 55.0%
CAAGTGACGCATGGATGAGG+AGG + chr2_2:56417201-56417220 Msa0259420:CDS 55.0%
GTGCAAGTGACGCATGGATG+AGG + chr2_2:56417204-56417223 Msa0259420:intron 55.0%
! GTCTGGCCTGAATCTGAAGC+CGG + chr2_2:56417466-56417485 Msa0259420:intron 55.0%
ACGTAGGTAGTGTGGCACAC+TGG + chr2_2:56418141-56418160 None:intergenic 55.0%
CCTCAACCGGGTATTCTGCA+TGG + chr2_2:56420938-56420957 None:intergenic 55.0%
CCATGCAGAATACCCGGTTG+AGG - chr2_2:56420935-56420954 Msa0259430:intron 55.0%
TTCCTTGTGGCAGCGTGTCA+TGG + chr2_2:56421599-56421618 None:intergenic 55.0%
GTCAATTATGCCTCCCCCGA+CGG + chr2_2:56422084-56422103 None:intergenic 55.0%
! GATGCCACAAGGAAGAGCGT+GGG + chr2_2:56422151-56422170 None:intergenic 55.0%
TGATGCCACAAGGAAGAGCG+TGG + chr2_2:56422152-56422171 None:intergenic 55.0%
CGGTGGAGGTAGAAGACATG+AGG - chr2_2:56422197-56422216 Msa0259430:intron 55.0%
GTCGTGAGGCTGCATATCGA+CGG - chr2_2:56422301-56422320 Msa0259430:CDS 55.0%
TATCGACGGCGACAAAACGG+TGG - chr2_2:56422315-56422334 Msa0259430:CDS 55.0%
AGAAGAGCAGAGAGCCCGTA+TGG - chr2_2:56422877-56422896 Msa0259430:CDS 55.0%
GTCCATGACACGCTGCCACA+AGG - chr2_2:56421594-56421613 Msa0259430:intron 60.0%
TTCGTCGGAGACTACAGCGG+TGG - chr2_2:56422180-56422199 Msa0259430:intron 60.0%
GCATTGCCGGACAGACAGAC+TGG + chr2_2:56422848-56422867 None:intergenic 60.0%
AGGCGCAGCAGGCGTCAACA+AGG + chr2_2:56422056-56422075 None:intergenic 65.0%
GTCGGAGACTACAGCGGTGG+AGG - chr2_2:56422183-56422202 Msa0259430:intron 65.0%
CTGCTGCGCCTCAGTGCCGT+CGG - chr2_2:56422065-56422084 Msa0259430:intron 70.0%
TGCTGCGCCTCAGTGCCGTC+GGG - chr2_2:56422066-56422085 Msa0259430:intron 70.0%
! CGACGGCACTGAGGCGCAGC+AGG + chr2_2:56422067-56422086 None:intergenic 75.0%
GCTGCGCCTCAGTGCCGTCG+GGG - chr2_2:56422067-56422086 Msa0259430:intron 75.0%
CTGCGCCTCAGTGCCGTCGG+GGG - chr2_2:56422068-56422087 Msa0259430:intron 75.0%
TGCCTCCCCCGACGGCACTG+AGG + chr2_2:56422076-56422095 None:intergenic 75.0%
! CGCCTCAGTGCCGTCGGGGG+AGG - chr2_2:56422071-56422090 Msa0259430:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 56416802 56423152 56416802 ID=Msa0259430;Name=Msa0259430
chr2_2 mRNA 56416802 56423152 56416802 ID=Msa0259430-mRNA-1;Parent=Msa0259430;Name=Msa0259430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=150|1|1|1|0.8|0.66|6|412|606
chr2_2 exon 56416802 56417203 56416802 ID=Msa0259430-mRNA-1:exon:17084;Parent=Msa0259430-mRNA-1
chr2_2 exon 56418323 56418767 56418323 ID=Msa0259430-mRNA-1:exon:17083;Parent=Msa0259430-mRNA-1
chr2_2 exon 56418845 56419613 56418845 ID=Msa0259430-mRNA-1:exon:17082;Parent=Msa0259430-mRNA-1
chr2_2 exon 56422219 56422377 56422219 ID=Msa0259430-mRNA-1:exon:17081;Parent=Msa0259430-mRNA-1
chr2_2 exon 56422468 56422722 56422468 ID=Msa0259430-mRNA-1:exon:17080;Parent=Msa0259430-mRNA-1
chr2_2 exon 56422800 56423152 56422800 ID=Msa0259430-mRNA-1:exon:17079;Parent=Msa0259430-mRNA-1
chr2_2 five_prime_UTR 56423003 56423152 56423003 ID=Msa0259430-mRNA-1:five_prime_utr;Parent=Msa0259430-mRNA-1
chr2_2 CDS 56422800 56423002 56422800 ID=Msa0259430-mRNA-1:cds;Parent=Msa0259430-mRNA-1
chr2_2 CDS 56422468 56422722 56422468 ID=Msa0259430-mRNA-1:cds;Parent=Msa0259430-mRNA-1
chr2_2 CDS 56422219 56422377 56422219 ID=Msa0259430-mRNA-1:cds;Parent=Msa0259430-mRNA-1
chr2_2 CDS 56418845 56419613 56418845 ID=Msa0259430-mRNA-1:cds;Parent=Msa0259430-mRNA-1
chr2_2 CDS 56418333 56418767 56418333 ID=Msa0259430-mRNA-1:cds;Parent=Msa0259430-mRNA-1
chr2_2 three_prime_UTR 56418323 56418332 56418323 ID=Msa0259430-mRNA-1:three_prime_utr;Parent=Msa0259430-mRNA-1
chr2_2 three_prime_UTR 56416802 56417203 56416802 ID=Msa0259430-mRNA-1:three_prime_utr;Parent=Msa0259430-mRNA-1
Gene Sequence

>Msa0259430

ATGGAGTCGGAGGAAGTTGCAGCCCTGAATCATCATCACGTTCGAACTTTCATTAAGCGGAATTATCGCAGTTTTGAGGATCATAGGAGTGATGAAGACGAGGACAAGGAGTTTCTTGAAATAATGTATTGGGATGATGAAACAATGATTCGTCCTGGTGTAGGTTTATCATCTGGCACCATTGATATCGGAGACTCACTCTGGACTTACAATTATTCGAGAAAAGGGACACAGTTGAAACTGTCCTTTGGACTTGATCAGAGTAAGCTGGCAACAATCGCTGATGTTCTAGTTACAGCAATTAACCTAAAGGATTCTTCAAAATTGCTTGTCTTAAGTAAAGATGTTACTAAAGGTGGTATTATTAGATGTAATCATCCACAAGTTTGTCAAACTAAAACCGGATTTATGGATCATTCTGGGGCTGTTTCGATCCGGCTTCAGATTCAGGCCAGACCCAATAAGCCTACTATTCATTCTTTCCATCGACATTTTAGACTGCAGTTATACTGGTTTAAGAAGAAAAGGATTGACCAAGTATTTTCTGATGTGATAAAGTCTACAACCACCACATATGACAAGTGCAAGAATGGTGTATCTGATTCTAGATGGGAAAGATATTTGGTAGAGGCTAGTAAGGACTTTTCCCTGAACAAAGATATATTCTGGAAGGGCTTACTGGATCATTGTAAAGGGGACTATTTTCTGGTAGACATTGTTAATTCTGGTTCTAAACTGTTACTCAACGAGAAACCCCCACAACTATCTTTTTTAATCGAAGCTGGTAAAGATGATTTTCACTTAATTGGTAGTTTTGGTGATTTGCTAAGTCACGCTTTACAACTGGCGTACTTGTCTATACAACAGTTAGATGCTGAGAATTTAACCCTTGAACGTGTAAGGGAATTTGAGGAGCGTCTGTTAAAGAATGGCAGCTTTGTTTTCCAATGTTTTTTCATCAACAGTAAATTCAAGCAAAGCTTTCTGCAATATCTGGAACAAGCTGAACCTGATCTAAAAATGGATGATGATGGTAAAAAAAATATTTCTGTTGGTGATGGAAAAGGTGGTAATTCTACTGAAGAGCAACCAGCTGACACTGATTATGCTCATTCAAAACCGAGTGATACTAAACAAGATGAACTCAGTAAATCTCTTCAGGCAATAATGACCTTGTACAATGAATGTTTAAAACCTGTCACGAAGAAGATCCATGCAGAATACCCGGTTGAGGAATTCAGTCGTGAACTAGAAAAGAAGATCTCTGAATGGCACGTTACTGCACAAAAAGATGCTTATTATCAATTTAGAGAGCAGGAGGAGAAGATCAATGATGCTGATTATATTGCTGACCAGGAAAGAAGAAAGTTTGTTTCACGGCCTACTGCCGGAGAAAAAAAAGCAATAAAATCCGAAGAGGAAGCTAGGATAATTGGGGAAATGGGTGAGAAGCATGCACACAAATATTTCACCACCAAATATAAAGGTCCCGAATATAAAGGTCGAAATCTTGTAGTTCGTTGGATGAATGAACATAGAGAAGCCGGACACGCTTACGATTTGTGCGTTTTTGAGAAAAATAAACCCAAGATTTTTATTAAAGTGAAGTCCACCTCTGTGTTAGGAAAAAATTGGTTTCATTTGACACCCAACGAGTATGAATCTGCTAAAGAGAACGAGGAGAATTACATCATTGCACATGTTCATATAAATGAAAATGAGCAAGATGAAACAAAGAAATACACTTTGACTGAATATGTTAATCCTCTTAAAGAAGGCGGTGAACTAAAATTGTCCATGACACGCTGCCACAAGGAATGA

Protein sequence

>Msa0259430

MESEEVAALNHHHVRTFIKRNYRSFEDHRSDEDEDKEFLEIMYWDDETMIRPGVGLSSGTIDIGDSLWTYNYSRKGTQLKLSFGLDQSKLATIADVLVTAINLKDSSKLLVLSKDVTKGGIIRCNHPQVCQTKTGFMDHSGAVSIRLQIQARPNKPTIHSFHRHFRLQLYWFKKKRIDQVFSDVIKSTTTTYDKCKNGVSDSRWERYLVEASKDFSLNKDIFWKGLLDHCKGDYFLVDIVNSGSKLLLNEKPPQLSFLIEAGKDDFHLIGSFGDLLSHALQLAYLSIQQLDAENLTLERVREFEERLLKNGSFVFQCFFINSKFKQSFLQYLEQAEPDLKMDDDGKKNISVGDGKGGNSTEEQPADTDYAHSKPSDTKQDELSKSLQAIMTLYNECLKPVTKKIHAEYPVEEFSRELEKKISEWHVTAQKDAYYQFREQEEKINDADYIADQERRKFVSRPTAGEKKAIKSEEEARIIGEMGEKHAHKYFTTKYKGPEYKGRNLVVRWMNEHREAGHAYDLCVFEKNKPKIFIKVKSTSVLGKNWFHLTPNEYESAKENEENYIIAHVHINENEQDETKKYTLTEYVNPLKEGGELKLSMTRCHKE*