Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142980 | A0A396J7B7 | 53.390 | 118 | 19 | 2 | 1 | 82 | 2 | 119 | 1.99e-22 | 94.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006290 | Msa0142980 | 0.805671 | 1.192651e-49 | -8.615850e-47 |
| Msa0007440 | Msa0142980 | 0.804585 | 2.012519e-49 | -8.615850e-47 |
| Msa0011960 | Msa0142980 | 0.827974 | 1.163233e-54 | -8.615850e-47 |
| Msa0013050 | Msa0142980 | -0.804675 | 1.928215e-49 | -8.615850e-47 |
| Msa0025730 | Msa0142980 | 0.821387 | 4.149436e-53 | -8.615850e-47 |
| Msa0027260 | Msa0142980 | 0.814970 | 1.174780e-51 | -8.615850e-47 |
| Msa0027770 | Msa0142980 | 0.812082 | 5.069952e-51 | -8.615850e-47 |
| Msa0028660 | Msa0142980 | 0.812091 | 5.047454e-51 | -8.615850e-47 |
| Msa0029260 | Msa0142980 | 0.800609 | 1.330302e-48 | -8.615850e-47 |
| Msa0032260 | Msa0142980 | 0.821635 | 3.635273e-53 | -8.615850e-47 |
| Msa0032580 | Msa0142980 | 0.816741 | 4.730868e-52 | -8.615850e-47 |
| Msa0033110 | Msa0142980 | 0.822318 | 2.526010e-53 | -8.615850e-47 |
| Msa0033260 | Msa0142980 | 0.820103 | 8.185874e-53 | -8.615850e-47 |
| Msa0037880 | Msa0142980 | 0.805600 | 1.234657e-49 | -8.615850e-47 |
| Msa0040690 | Msa0142980 | 0.810744 | 9.900378e-51 | -8.615850e-47 |
| Msa0043660 | Msa0142980 | 0.815994 | 6.948490e-52 | -8.615850e-47 |
| Msa0047160 | Msa0142980 | 0.804634 | 1.966194e-49 | -8.615850e-47 |
| Msa0052770 | Msa0142980 | 0.801199 | 1.007588e-48 | -8.615850e-47 |
| Msa0054440 | Msa0142980 | 0.801018 | 1.097537e-48 | -8.615850e-47 |
| Msa0054750 | Msa0142980 | 0.810957 | 8.903440e-51 | -8.615850e-47 |
| Msa0058300 | Msa0142980 | 0.804255 | 2.358064e-49 | -8.615850e-47 |
| Msa0061080 | Msa0142980 | 0.801553 | 8.526947e-49 | -8.615850e-47 |
| Msa0063530 | Msa0142980 | 0.831361 | 1.743837e-55 | -8.615850e-47 |
| Msa0070180 | Msa0142980 | 0.807869 | 4.093724e-50 | -8.615850e-47 |
| Msa0075500 | Msa0142980 | 0.803573 | 3.268650e-49 | -8.615850e-47 |
| Msa0078900 | Msa0142980 | 0.804056 | 2.594373e-49 | -8.615850e-47 |
| Msa0090520 | Msa0142980 | 0.800550 | 1.367255e-48 | -8.615850e-47 |
| Msa0091410 | Msa0142980 | 0.820819 | 5.606418e-53 | -8.615850e-47 |
| Msa0094470 | Msa0142980 | 0.808743 | 2.666096e-50 | -8.615850e-47 |
| Msa0100300 | Msa0142980 | 0.805575 | 1.249313e-49 | -8.615850e-47 |
| Msa0105620 | Msa0142980 | 0.813265 | 2.793593e-51 | -8.615850e-47 |
| Msa0112770 | Msa0142980 | 0.803377 | 3.588892e-49 | -8.615850e-47 |
| Msa0113750 | Msa0142980 | 0.807878 | 4.075859e-50 | -8.615850e-47 |
| Msa0127310 | Msa0142980 | 0.815167 | 1.062012e-51 | -8.615850e-47 |
| Msa0137550 | Msa0142980 | 0.812378 | 4.369729e-51 | -8.615850e-47 |
| Msa0137990 | Msa0142980 | 0.800013 | 1.758477e-48 | -8.615850e-47 |
| Msa0141340 | Msa0142980 | 0.803926 | 2.761299e-49 | -8.615850e-47 |
| Msa0142980 | Msa0144540 | 0.815380 | 9.521503e-52 | -8.615850e-47 |
| Msa0142980 | Msa0150820 | 0.823933 | 1.060921e-53 | -8.615850e-47 |
| Msa0142980 | Msa0159170 | 0.802842 | 4.630981e-49 | -8.615850e-47 |
| Msa0142980 | Msa0159180 | 0.805366 | 1.381844e-49 | -8.615850e-47 |
| Msa0142980 | Msa0160550 | 0.830120 | 3.511968e-55 | -8.615850e-47 |
| Msa0142980 | Msa0165660 | 0.812975 | 3.234889e-51 | -8.615850e-47 |
| Msa0142980 | Msa0168230 | 0.813770 | 2.163125e-51 | -8.615850e-47 |
| Msa0142980 | Msa0169300 | 0.800383 | 1.479041e-48 | -8.615850e-47 |
| Msa0142980 | Msa0171540 | 0.822336 | 2.502047e-53 | -8.615850e-47 |
| Msa0142980 | Msa0172970 | 0.808011 | 3.819482e-50 | -8.615850e-47 |
| Msa0142980 | Msa0189300 | 0.837797 | 4.204504e-57 | -8.615850e-47 |
| Msa0142980 | Msa0189520 | 0.806672 | 7.341772e-50 | -8.615850e-47 |
| Msa0142980 | Msa0208220 | 0.821683 | 3.544713e-53 | -8.615850e-47 |
| Msa0142980 | Msa0208350 | 0.807366 | 5.235317e-50 | -8.615850e-47 |
| Msa0142980 | Msa0209500 | 0.808925 | 2.437266e-50 | -8.615850e-47 |
| Msa0142980 | Msa0217680 | 0.804505 | 2.091371e-49 | -8.615850e-47 |
| Msa0142980 | Msa0220720 | 0.814264 | 1.683185e-51 | -8.615850e-47 |
| Msa0142980 | Msa0228070 | 0.852985 | 3.222484e-61 | -8.615850e-47 |
| Msa0142980 | Msa0229170 | 0.803002 | 4.291949e-49 | -8.615850e-47 |
| Msa0142980 | Msa0229380 | 0.802135 | 6.476842e-49 | -8.615850e-47 |
| Msa0142980 | Msa0229490 | -0.807899 | 4.034698e-50 | -8.615850e-47 |
| Msa0142980 | Msa0231660 | 0.820108 | 8.165682e-53 | -8.615850e-47 |
| Msa0142980 | Msa0255080 | 0.817553 | 3.106688e-52 | -8.615850e-47 |
| Msa0142980 | Msa0257500 | 0.807767 | 4.303303e-50 | -8.615850e-47 |
| Msa0142980 | Msa0259370 | 0.802675 | 5.013200e-49 | -8.615850e-47 |
| Msa0142980 | Msa0262310 | 0.828340 | 9.493570e-55 | -8.615850e-47 |
| Msa0142980 | Msa0271530 | 0.813741 | 2.195073e-51 | -8.615850e-47 |
| Msa0142980 | Msa0279220 | 0.823641 | 1.241711e-53 | -8.615850e-47 |
| Msa0142980 | Msa0279240 | 0.826626 | 2.446763e-54 | -8.615850e-47 |
| Msa0142980 | Msa0279790 | 0.801641 | 8.181261e-49 | -8.615850e-47 |
| Msa0142980 | Msa0289250 | 0.809776 | 1.601203e-50 | -8.615850e-47 |
| Msa0142980 | Msa0298700 | 0.815832 | 7.553964e-52 | -8.615850e-47 |
| Msa0142980 | Msa0299870 | 0.812067 | 5.108572e-51 | -8.615850e-47 |
| Msa0142980 | Msa0309750 | 0.813348 | 2.678357e-51 | -8.615850e-47 |
| Msa0142980 | Msa0318980 | 0.826853 | 2.160275e-54 | -8.615850e-47 |
| Msa0142980 | Msa0326480 | 0.808176 | 3.521598e-50 | -8.615850e-47 |
| Msa0142980 | Msa0333030 | 0.813808 | 2.121971e-51 | -8.615850e-47 |
| Msa0142980 | Msa0336420 | 0.821736 | 3.445600e-53 | -8.615850e-47 |
| Msa0142980 | Msa0337240 | 0.809269 | 2.056632e-50 | -8.615850e-47 |
| Msa0142980 | Msa0337620 | 0.823853 | 1.107748e-53 | -8.615850e-47 |
| Msa0142980 | Msa0337650 | 0.815538 | 8.780549e-52 | -8.615850e-47 |
| Msa0142980 | Msa0345350 | 0.819888 | 9.165324e-53 | -8.615850e-47 |
| Msa0142980 | Msa0357900 | 0.807011 | 6.225782e-50 | -8.615850e-47 |
| Msa0142980 | Msa0366890 | 0.811457 | 6.933244e-51 | -8.615850e-47 |
| Msa0142980 | Msa0376300 | 0.807703 | 4.441350e-50 | -8.615850e-47 |
| Msa0142980 | Msa0376310 | 0.806319 | 8.715262e-50 | -8.615850e-47 |
| Msa0142980 | Msa0383800 | 0.810883 | 9.236213e-51 | -8.615850e-47 |
| Msa0142980 | Msa0385490 | 0.815628 | 8.387313e-52 | -8.615850e-47 |
| Msa0142980 | Msa0385580 | 0.827294 | 1.693529e-54 | -8.615850e-47 |
| Msa0142980 | Msa0388050 | 0.803643 | 3.160508e-49 | -8.615850e-47 |
| Msa0142980 | Msa0388700 | 0.825180 | 5.394940e-54 | -8.615850e-47 |
| Msa0142980 | Msa0397540 | 0.829256 | 5.699984e-55 | -8.615850e-47 |
| Msa0142980 | Msa0398950 | 0.801950 | 7.069329e-49 | -8.615850e-47 |
| Msa0142980 | Msa0402790 | 0.827344 | 1.647743e-54 | -8.615850e-47 |
| Msa0142980 | Msa0408390 | 0.802067 | 6.688004e-49 | -8.615850e-47 |
| Msa0142980 | Msa0412840 | 0.811625 | 6.374852e-51 | -8.615850e-47 |
| Msa0142980 | Msa0442200 | 0.814764 | 1.304544e-51 | -8.615850e-47 |
| Msa0142980 | Msa0457510 | 0.825814 | 3.816739e-54 | -8.615850e-47 |
| Msa0142980 | Msa0458060 | 0.822039 | 2.931568e-53 | -8.615850e-47 |
| Msa0142980 | Msa0466250 | 0.815876 | 7.385513e-52 | -8.615850e-47 |
| Msa0142980 | Msa0467060 | 0.819199 | 1.316820e-52 | -8.615850e-47 |
| Msa0142980 | Msa0481530 | 0.816817 | 4.548534e-52 | -8.615850e-47 |
| Msa0142980 | Msa0482130 | 0.807425 | 5.086003e-50 | -8.615850e-47 |
| Msa0142980 | Msa0529890 | 0.821510 | 3.886271e-53 | -8.615850e-47 |
| Msa0142980 | Msa0534900 | 0.822841 | 1.908791e-53 | -8.615850e-47 |
| Msa0142980 | Msa0541360 | 0.806872 | 6.660529e-50 | -8.615850e-47 |
| Msa0142980 | Msa0542090 | 0.834673 | 2.616277e-56 | -8.615850e-47 |
| Msa0142980 | Msa0542130 | 0.831144 | 1.971590e-55 | -8.615850e-47 |
| Msa0142980 | Msa0553220 | -0.810826 | 9.501230e-51 | -8.615850e-47 |
| Msa0142980 | Msa0555450 | 0.860436 | 2.067826e-63 | -8.615850e-47 |
| Msa0142980 | Msa0585560 | 0.818540 | 1.858714e-52 | -8.615850e-47 |
| Msa0142980 | Msa0592440 | 0.837364 | 5.428169e-57 | -8.615850e-47 |
| Msa0142980 | Msa0605000 | 0.806140 | 9.507550e-50 | -8.615850e-47 |
| Msa0142980 | Msa0610130 | 0.805318 | 1.414419e-49 | -8.615850e-47 |
| Msa0142980 | Msa0610430 | 0.833519 | 5.091282e-56 | -8.615850e-47 |
| Msa0142980 | Msa0615490 | 0.804447 | 2.150507e-49 | -8.615850e-47 |
| Msa0142980 | Msa0617640 | 0.820425 | 6.905664e-53 | -8.615850e-47 |
| Msa0142980 | Msa0625720 | 0.817352 | 3.447406e-52 | -8.615850e-47 |
| Msa0142980 | Msa0631350 | 0.804265 | 2.347016e-49 | -8.615850e-47 |
| Msa0142980 | Msa0632870 | 0.810698 | 1.012988e-50 | -8.615850e-47 |
| Msa0142980 | Msa0643560 | 0.812112 | 4.993655e-51 | -8.615850e-47 |
| Msa0142980 | Msa0644660 | 0.816487 | 5.390684e-52 | -8.615850e-47 |
| Msa0142980 | Msa0661190 | -0.814607 | 1.413624e-51 | -8.615850e-47 |
| Msa0142980 | Msa0663390 | 0.814713 | 1.339359e-51 | -8.615850e-47 |
| Msa0142980 | Msa0675410 | 0.802472 | 5.519003e-49 | -8.615850e-47 |
| Msa0142980 | Msa0685140 | 0.820915 | 5.329092e-53 | -8.615850e-47 |
| Msa0142980 | Msa0688960 | 0.801342 | 9.422703e-49 | -8.615850e-47 |
| Msa0142980 | Msa0689260 | 0.825422 | 4.728254e-54 | -8.615850e-47 |
| Msa0142980 | Msa0691900 | 0.819482 | 1.134846e-52 | -8.615850e-47 |
| Msa0142980 | Msa0692830 | 0.829589 | 4.730063e-55 | -8.615850e-47 |
| Msa0142980 | Msa0692950 | 0.813241 | 2.828064e-51 | -8.615850e-47 |
| Msa0142980 | Msa0698060 | 0.818165 | 2.259393e-52 | -8.615850e-47 |
| Msa0142980 | Msa0698540 | 0.822847 | 1.902741e-53 | -8.615850e-47 |
| Msa0142980 | Msa0709500 | 0.801263 | 9.778493e-49 | -8.615850e-47 |
| Msa0142980 | Msa0711780 | 0.814826 | 1.263945e-51 | -8.615850e-47 |
| Msa0142980 | Msa0715650 | 0.808172 | 3.529059e-50 | -8.615850e-47 |
| Msa0142980 | Msa0715700 | 0.812900 | 3.358391e-51 | -8.615850e-47 |
| Msa0142980 | Msa0716840 | 0.812908 | 3.345480e-51 | -8.615850e-47 |
| Msa0142980 | Msa0719420 | 0.805082 | 1.584727e-49 | -8.615850e-47 |
| Msa0142980 | Msa0722020 | 0.807220 | 5.621739e-50 | -8.615850e-47 |
| Msa0142980 | Msa0745790 | 0.805241 | 1.467889e-49 | -8.615850e-47 |
| Msa0142980 | Msa0750430 | 0.800361 | 1.493975e-48 | -8.615850e-47 |
| Msa0142980 | Msa0772480 | 0.823601 | 1.268828e-53 | -8.615850e-47 |
| Msa0142980 | Msa0784380 | 0.802039 | 6.778104e-49 | -8.615850e-47 |
| Msa0142980 | Msa0784860 | 0.805193 | 1.502690e-49 | -8.615850e-47 |
| Msa0142980 | Msa0789680 | 0.808087 | 3.679050e-50 | -8.615850e-47 |
| Msa0142980 | Msa0793800 | 0.805251 | 1.461025e-49 | -8.615850e-47 |
| Msa0142980 | Msa0794670 | 0.820941 | 5.256690e-53 | -8.615850e-47 |
| Msa0142980 | Msa0798440 | 0.834595 | 2.737407e-56 | -8.615850e-47 |
| Msa0142980 | Msa0800370 | 0.816722 | 4.775357e-52 | -8.615850e-47 |
| Msa0142980 | Msa0802410 | 0.819686 | 1.019656e-52 | -8.615850e-47 |
| Msa0142980 | Msa0808270 | 0.822369 | 2.457918e-53 | -8.615850e-47 |
| Msa0142980 | Msa0830540 | 0.821906 | 3.146993e-53 | -8.615850e-47 |
| Msa0142980 | Msa0849030 | 0.804062 | 2.587310e-49 | -8.615850e-47 |
| Msa0142980 | Msa0866550 | 0.803586 | 3.247469e-49 | -8.615850e-47 |
| Msa0142980 | Msa0870150 | 0.807120 | 5.901643e-50 | -8.615850e-47 |
| Msa0142980 | Msa0887250 | 0.804672 | 1.930138e-49 | -8.615850e-47 |
| Msa0142980 | Msa0900110 | 0.803336 | 3.660206e-49 | -8.615850e-47 |
| Msa0142980 | Msa0902760 | 0.804600 | 1.998886e-49 | -8.615850e-47 |
| Msa0142980 | Msa0909110 | 0.814487 | 1.502786e-51 | -8.615850e-47 |
| Msa0142980 | Msa0942560 | -0.801401 | 9.161813e-49 | -8.615850e-47 |
| Msa0142980 | Msa0945440 | 0.823252 | 1.530593e-53 | -8.615850e-47 |
| Msa0142980 | Msa0947660 | 0.811103 | 8.278424e-51 | -8.615850e-47 |
| Msa0142980 | Msa0949590 | 0.802066 | 6.690368e-49 | -8.615850e-47 |
| Msa0142980 | Msa0968680 | 0.812570 | 3.966397e-51 | -8.615850e-47 |
| Msa0142980 | Msa0969810 | 0.815772 | 7.789238e-52 | -8.615850e-47 |
| Msa0142980 | Msa0970030 | 0.816560 | 5.193905e-52 | -8.615850e-47 |
| Msa0142980 | Msa0987370 | 0.809014 | 2.332604e-50 | -8.615850e-47 |
| Msa0142980 | Msa0989540 | 0.819642 | 1.043315e-52 | -8.615850e-47 |
| Msa0142980 | Msa0999050 | -0.800161 | 1.641014e-48 | -8.615850e-47 |
| Msa0142980 | Msa0999970 | 0.830219 | 3.322595e-55 | -8.615850e-47 |
| Msa0142980 | Msa1003620 | 0.800242 | 1.580148e-48 | -8.615850e-47 |
| Msa0142980 | Msa1006840 | 0.809622 | 1.727641e-50 | -8.615850e-47 |
| Msa0142980 | Msa1009820 | 0.810997 | 8.727771e-51 | -8.615850e-47 |
| Msa0142980 | Msa1012830 | 0.813824 | 2.104430e-51 | -8.615850e-47 |
| Msa0142980 | Msa1013040 | 0.801533 | 8.609676e-49 | -8.615850e-47 |
| Msa0142980 | Msa1014420 | 0.809771 | 1.604982e-50 | -8.615850e-47 |
| Msa0142980 | Msa1021540 | 0.809609 | 1.738764e-50 | -8.615850e-47 |
| Msa0142980 | Msa1034150 | 0.801910 | 7.205440e-49 | -8.615850e-47 |
| Msa0142980 | Msa1040400 | 0.800887 | 1.167425e-48 | -8.615850e-47 |
| Msa0142980 | Msa1046020 | 0.828710 | 7.729218e-55 | -8.615850e-47 |
| Msa0142980 | Msa1046060 | 0.827776 | 1.297502e-54 | -8.615850e-47 |
| Msa0142980 | Msa1051200 | 0.836338 | 9.921045e-57 | -8.615850e-47 |
| Msa0142980 | Msa1055410 | 0.815745 | 7.899238e-52 | -8.615850e-47 |
| Msa0142980 | Msa1063510 | 0.826509 | 2.609595e-54 | -8.615850e-47 |
| Msa0142980 | Msa1077030 | 0.822534 | 2.249841e-53 | -8.615850e-47 |
| Msa0142980 | Msa1084470 | 0.806865 | 6.683246e-50 | -8.615850e-47 |
| Msa0142980 | Msa1087710 | 0.809935 | 1.479700e-50 | -8.615850e-47 |
| Msa0142980 | Msa1091100 | 0.831891 | 1.290518e-55 | -8.615850e-47 |
| Msa0142980 | Msa1091940 | 0.831161 | 1.952730e-55 | -8.615850e-47 |
| Msa0142980 | Msa1093530 | 0.801304 | 9.589967e-49 | -8.615850e-47 |
| Msa0142980 | Msa1104140 | 0.806204 | 9.214681e-50 | -8.615850e-47 |
| Msa0142980 | Msa1109680 | 0.807269 | 5.489190e-50 | -8.615850e-47 |
| Msa0142980 | Msa1134090 | 0.829241 | 5.745476e-55 | -8.615850e-47 |
| Msa0142980 | Msa1136540 | 0.807267 | 5.493717e-50 | -8.615850e-47 |
| Msa0142980 | Msa1137700 | 0.829745 | 4.334683e-55 | -8.615850e-47 |
| Msa0142980 | Msa1143930 | -0.810050 | 1.397216e-50 | -8.615850e-47 |
| Msa0142980 | Msa1154280 | 0.802875 | 4.557632e-49 | -8.615850e-47 |
| Msa0142980 | Msa1160590 | 0.828444 | 8.962593e-55 | -8.615850e-47 |
| Msa0142980 | Msa1169550 | 0.816666 | 4.915688e-52 | -8.615850e-47 |
| Msa0142980 | Msa1174040 | 0.802022 | 6.832573e-49 | -8.615850e-47 |
| Msa0142980 | Msa1181250 | 0.820169 | 7.904965e-53 | -8.615850e-47 |
| Msa0142980 | Msa1181330 | 0.813784 | 2.148532e-51 | -8.615850e-47 |
| Msa0142980 | Msa1204250 | 0.809098 | 2.237794e-50 | -8.615850e-47 |
| Msa0142980 | Msa1207270 | 0.813013 | 3.173358e-51 | -8.615850e-47 |
| Msa0142980 | Msa1208880 | 0.816728 | 4.762668e-52 | -8.615850e-47 |
| Msa0142980 | Msa1209260 | 0.805810 | 1.115187e-49 | -8.615850e-47 |
| Msa0142980 | Msa1209760 | 0.807369 | 5.227776e-50 | -8.615850e-47 |
| Msa0142980 | Msa1210020 | 0.804662 | 1.939522e-49 | -8.615850e-47 |
| Msa0142980 | Msa1217430 | -0.811455 | 6.942201e-51 | -8.615850e-47 |
| Msa0142980 | Msa1224810 | 0.809335 | 1.990528e-50 | -8.615850e-47 |
| Msa0142980 | Msa1237940 | 0.832673 | 8.263859e-56 | -8.615850e-47 |
| Msa0142980 | Msa1245930 | 0.823896 | 1.081815e-53 | -8.615850e-47 |
| Msa0142980 | Msa1253800 | 0.814505 | 1.489017e-51 | -8.615850e-47 |
| Msa0142980 | Msa1254730 | 0.830285 | 3.201459e-55 | -8.615850e-47 |
| Msa0142980 | Msa1259060 | 0.818362 | 2.039763e-52 | -8.615850e-47 |
| Msa0142980 | Msa1259490 | -0.806510 | 7.943321e-50 | -8.615850e-47 |
| Msa0142980 | Msa1265630 | 0.803137 | 4.023616e-49 | -8.615850e-47 |
| Msa0142980 | Msa1275360 | 0.803653 | 3.145166e-49 | -8.615850e-47 |
| Msa0142980 | Msa1287460 | 0.803956 | 2.721786e-49 | -8.615850e-47 |
| Msa0142980 | Msa1294820 | 0.827342 | 1.649144e-54 | -8.615850e-47 |
| Msa0142980 | Msa1302190 | -0.810061 | 1.390078e-50 | -8.615850e-47 |
| Msa0142980 | Msa1302640 | 0.820282 | 7.447822e-53 | -8.615850e-47 |
| Msa0142980 | Msa1306920 | 0.814820 | 1.267949e-51 | -8.615850e-47 |
| Msa0142980 | Msa1332590 | 0.812689 | 3.736685e-51 | -8.615850e-47 |
| Msa0142980 | Msa1333110 | 0.811645 | 6.313353e-51 | -8.615850e-47 |
| Msa0142980 | Msa1336560 | 0.815073 | 1.114399e-51 | -8.615850e-47 |
| Msa0142980 | Msa1345220 | 0.832400 | 9.660696e-56 | -8.615850e-47 |
| Msa0142980 | Msa1348560 | 0.818412 | 1.987302e-52 | -8.615850e-47 |
| Msa0142980 | Msa1351540 | 0.804878 | 1.748417e-49 | -8.615850e-47 |
| Msa0142980 | Msa1353980 | 0.801481 | 8.822375e-49 | -8.615850e-47 |
| Msa0142980 | Msa1356440 | 0.817044 | 4.044511e-52 | -8.615850e-47 |
| Msa0142980 | Msa1358250 | 0.825301 | 5.051429e-54 | -8.615850e-47 |
| Msa0142980 | Msa1359630 | 0.807678 | 4.494947e-50 | -8.615850e-47 |
| Msa0142980 | Msa1370070 | -0.810775 | 9.748793e-51 | -8.615850e-47 |
| Msa0142980 | Msa1385460 | 0.805728 | 1.160491e-49 | -8.615850e-47 |
| Msa0142980 | Msa1385670 | 0.802754 | 4.828783e-49 | -8.615850e-47 |
| Msa0142980 | Msa1386780 | 0.807035 | 6.151834e-50 | -8.615850e-47 |
| Msa0142980 | Msa1392780 | 0.817508 | 3.179359e-52 | -8.615850e-47 |
| Msa0142980 | Msa1394290 | 0.825569 | 4.363371e-54 | -8.615850e-47 |
| Msa0142980 | Msa1394500 | 0.811079 | 8.374985e-51 | -8.615850e-47 |
| Msa0142980 | Msa1400580 | 0.823405 | 1.410180e-53 | -8.615850e-47 |
| Msa0142980 | Msa1403340 | 0.830177 | 3.400746e-55 | -8.615850e-47 |
| Msa0142980 | Msa1410100 | 0.812944 | 3.286212e-51 | -8.615850e-47 |
| Msa0142980 | Msa1419870 | 0.826075 | 3.309929e-54 | -8.615850e-47 |
| Msa0142980 | Msa1420990 | 0.822804 | 1.946701e-53 | -8.615850e-47 |
| Msa0142980 | Msa1423350 | 0.813253 | 2.810151e-51 | -8.615850e-47 |
| Msa0142980 | Msa1435370 | 0.807742 | 4.357463e-50 | -8.615850e-47 |
| Msa0142980 | Msa1437270 | 0.800806 | 1.212434e-48 | -8.615850e-47 |
| Msa0142980 | Msa1440000 | 0.820352 | 7.177690e-53 | -8.615850e-47 |
| Msa0142980 | Msa1442700 | 0.800618 | 1.324210e-48 | -8.615850e-47 |
| Msa0142980 | Msa1444310 | 0.856148 | 3.912614e-62 | -8.615850e-47 |
| Msa0142980 | Msa1454680 | 0.807607 | 4.653726e-50 | -8.615850e-47 |
| Msa0142980 | Msa1457920 | 0.850130 | 2.071425e-60 | -8.615850e-47 |
| Msa0142980 | Msa1465960 | 0.804757 | 1.853583e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142980 | MtrunA17_Chr2g0287331 | 53.390 | 118 | 19 | 2 | 1 | 82 | 2 | 119 | 3.82e-26 | 94.7 |
| Msa0142980 | MtrunA17_Chr2g0286581 | 33.702 | 181 | 67 | 5 | 2 | 130 | 17 | 196 | 1.47e-21 | 85.1 |
| Msa0142980 | MtrunA17_Chr2g0287401 | 37.654 | 162 | 65 | 4 | 2 | 130 | 7 | 165 | 6.87e-19 | 77.8 |
| Msa0142980 | MtrunA17_Chr2g0287391 | 38.506 | 174 | 55 | 8 | 2 | 124 | 7 | 179 | 1.17e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 21 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTCCTCAAAGTTGATA+TGG | 0.279492 | 1_4:+1905529 | Msa0142980:CDS |
| TGTTTCACTTTGTCTTCATC+TGG | 0.292772 | 1_4:-1905434 | None:intergenic |
| TGATGATCGAAATCCTTGTT+AGG | 0.329238 | 1_4:+1905199 | Msa0142980:CDS |
| TCAACACCAGCATCTTGTTC+TGG | 0.347187 | 1_4:-1905371 | None:intergenic |
| GATGATTGACGTTGCTCATT+TGG | 0.379191 | 1_4:+1905463 | Msa0142980:CDS |
| CAATCCATCCTCCACAGCTT+GGG | 0.389170 | 1_4:-1905555 | None:intergenic |
| ATTTCGATCATCAGTTCTAT+AGG | 0.398462 | 1_4:-1905189 | None:intergenic |
| GGGTTTCCATATCAACTTTG+AGG | 0.427266 | 1_4:-1905535 | None:intergenic |
| TCAATCCATCCTCCACAGCT+TGG | 0.467200 | 1_4:-1905556 | None:intergenic |
| GATGATCGAAATCCTTGTTA+GGG | 0.505946 | 1_4:+1905200 | Msa0142980:CDS |
| CGAGCAATCCTCTGCAAATG+AGG | 0.518022 | 1_4:+1905229 | Msa0142980:CDS |
| GAATTTACTTTCTATCAAAG+AGG | 0.536200 | 1_4:+1905499 | Msa0142980:CDS |
| GAAACCCAAGCTGTGGAGGA+TGG | 0.553602 | 1_4:+1905551 | Msa0142980:CDS |
| TCTATAGGTAGCACCGTGAT+CGG | 0.555660 | 1_4:-1905174 | None:intergenic |
| CAAACGCACCTCATTTGCAG+AGG | 0.579197 | 1_4:-1905237 | None:intergenic |
| CATCATCCAGAACAAGATGC+TGG | 0.583270 | 1_4:+1905365 | Msa0142980:CDS |
| GATGGCGGAGTCGCCGATCA+CGG | 0.583873 | 1_4:+1905161 | None:intergenic |
| ATGAAGACAAAGTGAAACAA+TGG | 0.590534 | 1_4:+1905438 | Msa0142980:CDS |
| TGCTCGAGTCAACCCTAACA+AGG | 0.609205 | 1_4:-1905212 | None:intergenic |
| TGATATGGAAACCCAAGCTG+TGG | 0.630518 | 1_4:+1905544 | Msa0142980:CDS |
| TATGGAAACCCAAGCTGTGG+AGG | 0.654505 | 1_4:+1905547 | Msa0142980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAATTTACTTTCTATCAAAG+AGG | + | chr1_4:1905499-1905518 | Msa0142980:CDS | 25.0% |
| ATTTCGATCATCAGTTCTAT+AGG | - | chr1_4:1905192-1905211 | None:intergenic | 30.0% | |
| ! | AGTGGATAATTCCACATTTT+AGG | - | chr1_4:1905291-1905310 | None:intergenic | 30.0% |
| ATGAAGACAAAGTGAAACAA+TGG | + | chr1_4:1905438-1905457 | Msa0142980:CDS | 30.0% | |
| GATAAATTCGCAAAAAGCTT+CGG | - | chr1_4:1905589-1905608 | None:intergenic | 30.0% | |
| TGATGATCGAAATCCTTGTT+AGG | + | chr1_4:1905199-1905218 | Msa0142980:CDS | 35.0% | |
| GATGATCGAAATCCTTGTTA+GGG | + | chr1_4:1905200-1905219 | Msa0142980:CDS | 35.0% | |
| TGTTTCACTTTGTCTTCATC+TGG | - | chr1_4:1905437-1905456 | None:intergenic | 35.0% | |
| !! | AACTCTCCTCAAAGTTGATA+TGG | + | chr1_4:1905529-1905548 | Msa0142980:CDS | 35.0% |
| TGGTCGTTGATCCTAAAATG+TGG | + | chr1_4:1905277-1905296 | Msa0142980:intron | 40.0% | |
| AGTCGCTGATCTAACTTCTA+AGG | + | chr1_4:1905313-1905332 | Msa0142980:intron | 40.0% | |
| GATGATTGACGTTGCTCATT+TGG | + | chr1_4:1905463-1905482 | Msa0142980:CDS | 40.0% | |
| GGGTTTCCATATCAACTTTG+AGG | - | chr1_4:1905538-1905557 | None:intergenic | 40.0% | |
| TCTATAGGTAGCACCGTGAT+CGG | - | chr1_4:1905177-1905196 | None:intergenic | 45.0% | |
| AGTTAGATCAGCGACTTCAG+TGG | - | chr1_4:1905309-1905328 | None:intergenic | 45.0% | |
| CATCATCCAGAACAAGATGC+TGG | + | chr1_4:1905365-1905384 | Msa0142980:CDS | 45.0% | |
| TCAACACCAGCATCTTGTTC+TGG | - | chr1_4:1905374-1905393 | None:intergenic | 45.0% | |
| TGATATGGAAACCCAAGCTG+TGG | + | chr1_4:1905544-1905563 | Msa0142980:CDS | 45.0% | |
| TGCTCGAGTCAACCCTAACA+AGG | - | chr1_4:1905215-1905234 | None:intergenic | 50.0% | |
| CGAGCAATCCTCTGCAAATG+AGG | + | chr1_4:1905229-1905248 | Msa0142980:CDS | 50.0% | |
| CAAACGCACCTCATTTGCAG+AGG | - | chr1_4:1905240-1905259 | None:intergenic | 50.0% | |
| !! | TTGCAAGCTCTGGAAATCGC+TGG | + | chr1_4:1905257-1905276 | Msa0142980:intron | 50.0% |
| TATGGAAACCCAAGCTGTGG+AGG | + | chr1_4:1905547-1905566 | Msa0142980:CDS | 50.0% | |
| CAATCCATCCTCCACAGCTT+GGG | - | chr1_4:1905558-1905577 | None:intergenic | 50.0% | |
| TCAATCCATCCTCCACAGCT+TGG | - | chr1_4:1905559-1905578 | None:intergenic | 50.0% | |
| TGAGGTGCGTTTGCAAGCTC+TGG | + | chr1_4:1905247-1905266 | Msa0142980:intron | 55.0% | |
| GAAACCCAAGCTGTGGAGGA+TGG | + | chr1_4:1905551-1905570 | Msa0142980:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1905162 | 1905634 | 1905162 | ID=Msa0142980;Name=Msa0142980 |
| chr1_4 | mRNA | 1905162 | 1905634 | 1905162 | ID=Msa0142980-mRNA-1;Parent=Msa0142980;Name=Msa0142980-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|130 |
| chr1_4 | exon | 1905162 | 1905254 | 1905162 | ID=Msa0142980-mRNA-1:exon:718;Parent=Msa0142980-mRNA-1 |
| chr1_4 | exon | 1905335 | 1905634 | 1905335 | ID=Msa0142980-mRNA-1:exon:719;Parent=Msa0142980-mRNA-1 |
| chr1_4 | CDS | 1905162 | 1905254 | 1905162 | ID=Msa0142980-mRNA-1:cds;Parent=Msa0142980-mRNA-1 |
| chr1_4 | CDS | 1905335 | 1905634 | 1905335 | ID=Msa0142980-mRNA-1:cds;Parent=Msa0142980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
