AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1299290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299290 MtrunA17_Chr4g0059861 96.154 546 17 3 1 545 1 543 0.0 981
Msa1299290 MtrunA17_Chr4g0059871 66.545 547 107 11 1 545 1 473 1.18e-113 345
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299290 AT5G62640.1 72.678 183 42 3 3 183 2 178 5.62e-73 241
Msa1299290 AT5G62640.2 75.000 152 30 3 3 152 2 147 3.05e-69 231
Msa1299290 AT5G62640.3 56.897 232 78 7 322 545 323 540 9.99e-31 126

Find 220 sgRNAs with CRISPR-Local

Find 559 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAAGCAGATTGAGAATT+TGG 0.130026 8_3:-60395315 Msa1299290:CDS
TTTCTGAAAGGGTGAGAATT+AGG 0.188648 8_3:-60395702 Msa1299290:five_prime_UTR
CAATAAGGCCAAAGGTTTAT+TGG 0.197365 8_3:-60395947 None:intergenic
TGGTCCTCCTCCGAACTTTC+AGG 0.207495 8_3:-60390460 Msa1299290:CDS
TCATCAATGCTTGGTGCTTT+TGG 0.211601 8_3:+60389290 None:intergenic
CGATTTACAGCTTGCTCTTT+AGG 0.216103 8_3:+60391689 None:intergenic
GGATTTGGAGGCATGGGAGG+TGG 0.226128 8_3:+60391776 None:intergenic
CTGCTTCTACTGTTGTTAAA+AGG 0.257420 8_3:-60390377 Msa1299290:CDS
ATTTGGAGGCATGGGAGGTG+GGG 0.269646 8_3:+60391778 None:intergenic
TTTAGAGGTGGAGGAGGAGG+AGG 0.284748 8_3:+60391656 None:intergenic
CCTCCAAGGCAACAGCTTCC+TGG 0.287579 8_3:-60390705 Msa1299290:CDS
TTACCTGTGATTGGACTTCC+TGG 0.292890 8_3:-60390582 Msa1299290:CDS
TCTGCACTTGTTCTCCTTTG+TGG 0.295951 8_3:+60392437 None:intergenic
TTTGGAGGCATGGGAGGTGG+GGG 0.304569 8_3:+60391779 None:intergenic
CTCATACACAGCTTTCTTAG+AGG 0.305527 8_3:-60389267 Msa1299290:CDS
GGACCTAGAATTCCCTTGTT+TGG 0.312511 8_3:-60391947 Msa1299290:CDS
TCAGGTAGTGGTGGTGGTGG+GGG 0.314402 8_3:+60391851 None:intergenic
AGAGGTGGAGGAGGAGGAGG+GGG 0.316003 8_3:+60391659 None:intergenic
TCGAAAGGAGCTTCGCAAAA+AGG 0.318695 8_3:-60395615 Msa1299290:CDS
AATAAGGCCAAAGGTTTATT+GGG 0.326873 8_3:-60395946 None:intergenic
ATTGCTCACCTGAACATAAC+AGG 0.338442 8_3:+60392552 None:intergenic
ATTTCTCTCTTCACCTTCAC+TGG 0.339492 8_3:+60391607 None:intergenic
GCACCAAACAAGGGAATTCT+AGG 0.342077 8_3:+60391944 None:intergenic
GATTTGGAGGCATGGGAGGT+GGG 0.344877 8_3:+60391777 None:intergenic
GGCACCGCAGTAGTGGGATT+TGG 0.348132 8_3:+60391761 None:intergenic
TTCTGAAAGGGTGAGAATTA+GGG 0.354685 8_3:-60395701 Msa1299290:five_prime_UTR
GGCCCAGGTGGAGGACCATA+TGG 0.355526 8_3:+60390513 None:intergenic
TTATTGGGCTGGATCTGATT+CGG 0.356605 8_3:-60395931 Msa1299290:five_prime_UTR
AGTCGTATGCCACAAAATTC+TGG 0.358131 8_3:-60390819 Msa1299290:CDS
ATCTGCTTCTTGAGTTGATC+AGG 0.363974 8_3:+60395326 None:intergenic
GATTTAACATATGATGGTTT+CGG 0.367788 8_3:+60390402 None:intergenic
AAGGCAACAGCTTCCTGGTC+CGG 0.368107 8_3:-60390700 Msa1299290:CDS
AGGCCTCCTTTACCTGTGAT+TGG 0.372234 8_3:-60390591 Msa1299290:CDS
TATTGGGCTGGATCTGATTC+GGG 0.372828 8_3:-60395930 Msa1299290:five_prime_UTR
GGTGGTGGCGGCAAAGGAGG+TGG 0.375758 8_3:+60391725 None:intergenic
TCCTTGGAAGATAGATTATC+TGG 0.379238 8_3:+60391572 None:intergenic
TCTGGTGCTATTCAGTTTGA+TGG 0.389631 8_3:-60390801 Msa1299290:CDS
CATCACCTTACCGCCTTTAG+TGG 0.391432 8_3:+60395655 None:intergenic
GGTAAAGGAGGCCTCATATC+AGG 0.395163 8_3:+60390600 None:intergenic
AGAAAGAAGGTGAGGGATGT+GGG 0.397715 8_3:-60395365 Msa1299290:CDS
CCAGGAGGTGGTGGCGGCAA+AGG 0.398079 8_3:+60391719 None:intergenic
TAGAGGTGGAGGAGGAGGAG+GGG 0.398951 8_3:+60391658 None:intergenic
ATAGAGATAGATAAATAAAC+GGG 0.399711 8_3:+60395793 None:intergenic
AAGAAAGAAGGTGAGGGATG+TGG 0.403157 8_3:-60395366 Msa1299290:CDS
TCTGGAGTGTGCTGAGCTAA+TGG 0.405498 8_3:+60390354 None:intergenic
CCAGGAAGCTGTTGCCTTGG+AGG 0.408241 8_3:+60390705 None:intergenic
CTATTTGAAATCTCTTCATC+AGG 0.409972 8_3:-60395774 Msa1299290:five_prime_UTR
ATACGACTTGGTGGTGGAGG+GGG 0.412964 8_3:+60390834 None:intergenic
GCAGCAGATTTAACATATGA+TGG 0.412978 8_3:+60390396 None:intergenic
AATAGAGATAGATAAATAAA+CGG 0.417849 8_3:+60395792 None:intergenic
CACTCCAGAACTCACATCTA+TGG 0.418941 8_3:-60390340 Msa1299290:intron
CTTCAGGTAGTGGTGGTGGT+GGG 0.419008 8_3:+60391849 None:intergenic
TCTTCACCTTCACTGGTGCC+AGG 0.419115 8_3:+60391614 None:intergenic
AAAGCCCTTGGCGCACTTGA+TGG 0.419887 8_3:-60389239 Msa1299290:CDS
CCCACCGGGGCTCCACCGCC+AGG 0.420001 8_3:-60392103 Msa1299290:CDS
CTTACCATAGATGTGAGTTC+TGG 0.420790 8_3:+60390336 None:intergenic
CTCATCATTGGAGGAGGCCC+AGG 0.423053 8_3:+60390498 None:intergenic
GGCCTCATATCAGGTGGTGG+GGG 0.424004 8_3:+60390609 None:intergenic
GCTTCAGGTAGTGGTGGTGG+TGG 0.429141 8_3:+60391848 None:intergenic
CTAAAGAGCAAGCTGTAAAT+CGG 0.431062 8_3:-60391688 Msa1299290:CDS
CTGCATCTGTGCGGGTGAGA+AGG 0.432711 8_3:-60389442 Msa1299290:CDS
AGGCCAAAGGTTTATTGGGC+TGG 0.434725 8_3:-60395942 Msa1299290:five_prime_UTR
TTCAGGTAGTGGTGGTGGTG+GGG 0.436391 8_3:+60391850 None:intergenic
TTAGAGGTGGAGGAGGAGGA+GGG 0.438967 8_3:+60391657 None:intergenic
CCTGGTCAGGCACCACCTCC+TGG 0.442000 8_3:-60390564 Msa1299290:CDS
GCCCAGGTGGAGGACCATAT+GGG 0.444020 8_3:+60390514 None:intergenic
ACATATGATGGTTTCGGAGC+AGG 0.444347 8_3:+60390408 None:intergenic
TCACTGGTGCCAGGTGGAGG+TGG 0.446142 8_3:+60391623 None:intergenic
TGATACATGGGAGGTTTCCC+TGG 0.447239 8_3:+60392085 None:intergenic
GGCATACGACTTGGTGGTGG+AGG 0.448853 8_3:+60390831 None:intergenic
TAACAAGGAAATTTCTGAAA+GGG 0.449703 8_3:-60395713 Msa1299290:five_prime_UTR
GGAAGTGGTGGTCTCATCAT+TGG 0.450117 8_3:+60390486 None:intergenic
AGCTGTTGCCTTGGAGGAGG+AGG 0.453447 8_3:+60390711 None:intergenic
GGAGGACCAGGAGGTGGTGG+CGG 0.453518 8_3:+60391713 None:intergenic
ATCTTCCAAGGAGCCTGGTC+AGG 0.453723 8_3:-60391561 Msa1299290:intron
CCTTCACTGGTGCCAGGTGG+AGG 0.456671 8_3:+60391620 None:intergenic
GCTGAACTAGCTTCAGGTAG+TGG 0.460116 8_3:+60391839 None:intergenic
CCATCAGCTGAACTAGCTTC+AGG 0.460920 8_3:+60391833 None:intergenic
CCTTTGCCGCCACCACCTCC+TGG 0.462646 8_3:-60391719 Msa1299290:CDS
TGATTCTTCGTTGTTTCTCA+CGG 0.466889 8_3:+60395897 None:intergenic
GTGAGGCCCCTGTTATGTTC+AGG 0.467029 8_3:-60392560 Msa1299290:intron
CCAGGAGGTGGTGCCTGACC+AGG 0.467100 8_3:+60390564 None:intergenic
GGTGGAGGACCAGGAGGTGG+TGG 0.469883 8_3:+60391710 None:intergenic
GGAGGCAGTGGCAAAGATGC+AGG 0.471761 8_3:+60391800 None:intergenic
ACTGTTGATACAGATGGTTT+TGG 0.471897 8_3:+60389395 None:intergenic
GATTCTTCGTTGTTTCTCAC+GGG 0.473737 8_3:+60395898 None:intergenic
TTAGGTGGAGGACCAGGAGG+TGG 0.473869 8_3:+60391707 None:intergenic
CAGTGTCAGTGTCAACATCT+AGG 0.473967 8_3:-60389376 Msa1299290:CDS
GTACCTGATGTATTGCCTCC+TGG 0.473990 8_3:-60390657 Msa1299290:CDS
TTTCCCTGGCGGTGGAGCCC+CGG 0.474245 8_3:+60392099 None:intergenic
TGCTCTTTAGGTGGAGGACC+AGG 0.474543 8_3:+60391701 None:intergenic
TGATCCTCTTCCTGAAAGTT+CGG 0.476025 8_3:+60390450 None:intergenic
CTTCTCACCCGCACAGATGC+AGG 0.476908 8_3:+60389443 None:intergenic
GCATACGACTTGGTGGTGGA+GGG 0.477743 8_3:+60390832 None:intergenic
CTAGGTTCCTGCATCTGTGC+GGG 0.477960 8_3:-60389450 Msa1299290:intron
CCTAACCTGACCAGGCTCCT+TGG 0.478216 8_3:+60391556 None:intergenic
GTGCTTTCTTGCTTTATCCA+AGG 0.481613 8_3:+60394432 None:intergenic
CTTTCAGGAAGAGGATCATA+TGG 0.481743 8_3:-60390445 Msa1299290:CDS
ACCTATAGGCGAATGATACA+TGG 0.485649 8_3:+60392072 None:intergenic
AGGCAACAGCTTCCTGGTCC+GGG 0.486120 8_3:-60390699 Msa1299290:CDS
GGCACCACCTCCTGGAATGA+TGG 0.487416 8_3:-60390556 Msa1299290:CDS
GGTGGGAACCGAGATATTCC+AGG 0.489053 8_3:+60390639 None:intergenic
GATCCAGCCCAATAAACCTT+TGG 0.493613 8_3:+60395939 None:intergenic
ATTAATGTGGGTCCCGGACC+AGG 0.493651 8_3:+60390687 None:intergenic
TTAGAGGACATGAAAGCCCT+TGG 0.493881 8_3:-60389251 Msa1299290:CDS
AGAGTGGCGAAGCAGCAAAA+TGG 0.494603 8_3:-60389213 Msa1299290:three_prime_UTR
TCCTCCGAACTTTCAGGAAG+AGG 0.499458 8_3:-60390454 Msa1299290:CDS
GGAGGTGGTGGCGGCAAAGG+AGG 0.502570 8_3:+60391722 None:intergenic
ATGGGAGGTTTCCCTGGCGG+TGG 0.506246 8_3:+60392091 None:intergenic
CCCCATATGGTCCTCCACCT+GGG 0.506318 8_3:-60390515 Msa1299290:CDS
ATTGGAGGAGGCCCAGGTGG+AGG 0.506698 8_3:+60390504 None:intergenic
GGACCAGGAAGCTGTTGCCT+TGG 0.506825 8_3:+60390702 None:intergenic
AAGGAGAACAAGTGCAGAAG+AGG 0.507831 8_3:-60392432 Msa1299290:CDS
TTAAATCATACCTCTGGCTG+TGG 0.511939 8_3:+60392392 None:intergenic
TGTGATTGGACTTCCTGGTC+AGG 0.512104 8_3:-60390577 Msa1299290:CDS
GGAGGAGGACCAGGTGGAAG+TGG 0.512147 8_3:+60390471 None:intergenic
GATGGTTTCGGAGCAGGAAG+TGG 0.513629 8_3:+60390414 None:intergenic
CCCTGGCGGTGGAGCCCCGG+TGG 0.513903 8_3:+60392102 None:intergenic
GGAAGTCCAATCACAGGTAA+AGG 0.514638 8_3:+60390585 None:intergenic
AGGACAGTCTCTGTGACACC+TGG 0.515263 8_3:-60389356 Msa1299290:CDS
CATACGACTTGGTGGTGGAG+GGG 0.515545 8_3:+60390833 None:intergenic
GGTGGCGGCAAAGGAGGTGG+TGG 0.516548 8_3:+60391728 None:intergenic
TTTAGTTTAAGTCGACGTAC+TGG 0.516741 8_3:-60389072 Msa1299290:intron
TGAAAGTTCGGAGGAGGACC+AGG 0.517098 8_3:+60390462 None:intergenic
ACAGCTTGCTCTTTAGGTGG+AGG 0.520491 8_3:+60391695 None:intergenic
TGCATCTGTGCGGGTGAGAA+GGG 0.520543 8_3:-60389441 Msa1299290:CDS
ATTCCAGGAGGCAATACATC+AGG 0.520837 8_3:+60390654 None:intergenic
CTAGCTTCAGGTAGTGGTGG+TGG 0.527420 8_3:+60391845 None:intergenic
TTCCTGGGCCTCCTCCTCCA+AGG 0.528195 8_3:-60390719 Msa1299290:CDS
CCCAGGTGGAGGACCATATG+GGG 0.528745 8_3:+60390515 None:intergenic
GTGGGATTTGGAGGCATGGG+AGG 0.528883 8_3:+60391773 None:intergenic
GGAGGTGGTGGTAATGATGC+AGG 0.529142 8_3:+60391740 None:intergenic
TGCCTTGGAGGAGGAGGCCC+AGG 0.530063 8_3:+60390717 None:intergenic
TGCAGAGGCTGATGGCGCCT+TGG 0.531731 8_3:-60394449 Msa1299290:intron
TGATGCAGGCACCGCAGTAG+TGG 0.531793 8_3:+60391754 None:intergenic
GGGACCATCATTCCAGGAGG+TGG 0.537097 8_3:+60390552 None:intergenic
TTTACAGCTTGCTCTTTAGG+TGG 0.539205 8_3:+60391692 None:intergenic
GGAGGACCAGGTGGAAGTGG+TGG 0.539749 8_3:+60390474 None:intergenic
AATCTATCTTCCAAGGAGCC+TGG 0.539750 8_3:-60391566 Msa1299290:CDS
GGAGGCCTCATATCAGGTGG+TGG 0.540278 8_3:+60390606 None:intergenic
AAAAGAATTTGTCATTTGAG+TGG 0.540541 8_3:+60389157 None:intergenic
CGGTGGGATTTAATTGAGGA+TGG 0.542007 8_3:+60392119 None:intergenic
CAGTCTCAGCCACCTCCACC+TGG 0.544942 8_3:-60391632 Msa1299290:CDS
CCTCCACCTGGCACCAGTGA+AGG 0.546364 8_3:-60391620 Msa1299290:CDS
TCAACCATCAAGTGCGCCAA+GGG 0.548366 8_3:+60389235 None:intergenic
GAGGCCTCATATCAGGTGGT+GGG 0.550412 8_3:+60390607 None:intergenic
CATCCTCAATTAAATCCCAC+CGG 0.551979 8_3:-60392118 Msa1299290:CDS
GGAAGCTGTTGCCTTGGAGG+AGG 0.553176 8_3:+60390708 None:intergenic
AAGAGGATCATATGGCAACT+AGG 0.554783 8_3:-60390437 Msa1299290:CDS
CTCAACCATCAAGTGCGCCA+AGG 0.554979 8_3:+60389234 None:intergenic
GGCAATACATCAGGTACACT+CGG 0.556144 8_3:+60390663 None:intergenic
TCAATGACGAAGACCACTAA+AGG 0.562510 8_3:-60395668 Msa1299290:CDS
TTTGTTGTTGCAGAGGCTGA+TGG 0.564467 8_3:-60394457 Msa1299290:intron
ACTTGACGAAGCACCAAACA+AGG 0.565529 8_3:+60391934 None:intergenic
AAGTACTGCTGCATCATCCT+CGG 0.566168 8_3:-60391915 Msa1299290:CDS
ACCGCAGTAGTGGGATTTGG+AGG 0.569597 8_3:+60391764 None:intergenic
TCCTTTCGATAAGCATCGGT+AGG 0.569880 8_3:+60395629 None:intergenic
AGGTACACTCGGGATTAATG+TGG 0.571809 8_3:+60390674 None:intergenic
TCGGCAACAGAGTCCGATGA+TGG 0.572933 8_3:-60391896 Msa1299290:CDS
TATTGCCTCCTGGAATATCT+CGG 0.573541 8_3:-60390647 Msa1299290:CDS
GCCAGATAATCTATCTTCCA+AGG 0.576178 8_3:-60391573 Msa1299290:CDS
AGTAGTGGGATTTGGAGGCA+TGG 0.576665 8_3:+60391769 None:intergenic
TTAACAAGGAAATTTCTGAA+AGG 0.578284 8_3:-60395714 Msa1299290:five_prime_UTR
CCACCGGGGCTCCACCGCCA+GGG 0.581017 8_3:-60392102 Msa1299290:CDS
ATCCTCAATTAAATCCCACC+GGG 0.581043 8_3:-60392117 Msa1299290:CDS
TCTTCCTGAAAGTTCGGAGG+AGG 0.582416 8_3:+60390456 None:intergenic
TACAGCTAATACACCATCAT+CGG 0.582569 8_3:+60391883 None:intergenic
CCCTACCGATGCTTATCGAA+AGG 0.583184 8_3:-60395630 Msa1299290:CDS
AAAAGAAAGAAAGAAGGTGA+GGG 0.585531 8_3:-60395372 Msa1299290:CDS
GGTGGTCTCATCATTGGAGG+AGG 0.586166 8_3:+60390492 None:intergenic
GATGCAGGCACCGCAGTAGT+GGG 0.588100 8_3:+60391755 None:intergenic
AAAATGACCCTAACCTGACC+AGG 0.588301 8_3:+60391548 None:intergenic
GAAAGAAGGTGAGGGATGTG+GGG 0.589038 8_3:-60395364 Msa1299290:CDS
AGTGGTGGTCTCATCATTGG+AGG 0.590662 8_3:+60390489 None:intergenic
TGTGGCATACGACTTGGTGG+TGG 0.592004 8_3:+60390828 None:intergenic
ATCATTGGAGGAGGCCCAGG+TGG 0.592389 8_3:+60390501 None:intergenic
TAAGCATTCTTTGTCAAACC+AGG 0.592651 8_3:-60390757 Msa1299290:CDS
CCTTTCGATAAGCATCGGTA+GGG 0.605420 8_3:+60395630 None:intergenic
ATGAGACCACCACTTCCACC+TGG 0.606838 8_3:-60390480 Msa1299290:CDS
ATCATCGGACTCTGTTGCCG+AGG 0.607996 8_3:+60391898 None:intergenic
GAAGACCACTAAAGGCGGTA+AGG 0.608375 8_3:-60395660 Msa1299290:CDS
GTAGTGGGATTTGGAGGCAT+GGG 0.609767 8_3:+60391770 None:intergenic
ACTAGGTTCCTGCATCTGTG+CGG 0.610057 8_3:-60389451 Msa1299290:intron
ACTGACACTGTTGATACAGA+TGG 0.611266 8_3:+60389389 None:intergenic
AGGCCTCATATCAGGTGGTG+GGG 0.613371 8_3:+60390608 None:intergenic
GAACTAGCTTCAGGTAGTGG+TGG 0.615671 8_3:+60391842 None:intergenic
TCACCTTCACTGGTGCCAGG+TGG 0.617139 8_3:+60391617 None:intergenic
GTCATTTGGGGCTTCCACAA+AGG 0.619694 8_3:-60392451 Msa1299290:CDS
TCGTGTCATTAAGAAGCAGA+AGG 0.622726 8_3:-60394380 Msa1299290:intron
TCTTTAGGTGGAGGACCAGG+AGG 0.623946 8_3:+60391704 None:intergenic
TGACCAGGAAGTCCAATCAC+AGG 0.624879 8_3:+60390579 None:intergenic
ATTCTTCGTTGTTTCTCACG+GGG 0.628662 8_3:+60395899 None:intergenic
ACTGAAAACAATAAGGCCAA+AGG 0.629475 8_3:-60395955 None:intergenic
TTGCTCACCTGAACATAACA+GGG 0.631512 8_3:+60392553 None:intergenic
CCTGAAGCTAGTTCAGCTGA+TGG 0.633084 8_3:-60391833 Msa1299290:CDS
AAGCTCCTTTCGATAAGCAT+CGG 0.633489 8_3:+60395625 None:intergenic
GGACAGTCTCTGTGACACCT+GGG 0.635661 8_3:-60389355 Msa1299290:CDS
TCCTCTTCCTGAAAGTTCGG+AGG 0.636254 8_3:+60390453 None:intergenic
CCTATAGGCGAATGATACAT+GGG 0.639942 8_3:+60392073 None:intergenic
GTGTATGAGTCATCAATGCT+TGG 0.640196 8_3:+60389281 None:intergenic
CCAGGTGGAGGACCATATGG+GGG 0.641485 8_3:+60390516 None:intergenic
TAAATCATACCTCTGGCTGT+GGG 0.649756 8_3:+60392393 None:intergenic
AGTCCAATCACAGGTAAAGG+AGG 0.651630 8_3:+60390588 None:intergenic
TCATTACATTACGTTAACAG+TGG 0.655644 8_3:-60395877 Msa1299290:five_prime_UTR
GGTACACTCGGGATTAATGT+GGG 0.659832 8_3:+60390675 None:intergenic
AAGTTCGGAGGAGGACCAGG+TGG 0.660564 8_3:+60390465 None:intergenic
GCGCACTTGATGGTTGAGAG+TGG 0.661810 8_3:-60389229 Msa1299290:exon
AGTTAATCACCCACAGCCAG+AGG 0.670316 8_3:-60392402 Msa1299290:intron
AAAGGAGGCCTCATATCAGG+TGG 0.677019 8_3:+60390603 None:intergenic
TACATGGGAGGTTTCCCTGG+CGG 0.677913 8_3:+60392088 None:intergenic
TTCTTCGTTGTTTCTCACGG+GGG 0.685039 8_3:+60395900 None:intergenic
GCAATACATCAGGTACACTC+GGG 0.687124 8_3:+60390664 None:intergenic
GCCTCCAAATCCCACTACTG+CGG 0.689468 8_3:-60391765 Msa1299290:CDS
ATGACGAAGACCACTAAAGG+CGG 0.707083 8_3:-60395665 Msa1299290:CDS
CTTGACGAAGCACCAAACAA+GGG 0.711319 8_3:+60391935 None:intergenic
TGCTCACCTGAACATAACAG+GGG 0.717894 8_3:+60392554 None:intergenic
ATAGGCGAATGATACATGGG+AGG 0.758093 8_3:+60392076 None:intergenic
TCCTCAATTAAATCCCACCG+GGG 0.761840 8_3:-60392116 Msa1299290:CDS
GGGAACCGAGATATTCCAGG+AGG 0.763126 8_3:+60390642 None:intergenic
TAGAGATAGATAAATAAACG+GGG 0.776342 8_3:+60395794 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGAGATAGATAAATAAA+CGG + chr8_3:60389174-60389193 None:intergenic 15.0%
!!! TAGTTTTGCAAAATTAAATT+TGG - chr8_3:60389435-60389454 Msa1299290:CDS 15.0%
!! AACTAATAATATGAAGTATA+AGG + chr8_3:60389853-60389872 None:intergenic 15.0%
!!! TTTGTATTTTTATTTAGCAT+AGG - chr8_3:60392252-60392271 Msa1299290:intron 15.0%
!!! TGTATATTAATATTTTCAGA+CGG - chr8_3:60394793-60394812 Msa1299290:intron 15.0%
!!! TTCTGTTATTTTATTATGAA+TGG - chr8_3:60394936-60394955 Msa1299290:intron 15.0%
!!! AATAATAAAGCATTAAGAAA+TGG + chr8_3:60395080-60395099 None:intergenic 15.0%
!! ATAGAGATAGATAAATAAAC+GGG + chr8_3:60389173-60389192 None:intergenic 20.0%
!! AGGAACAATAAAAATTAACA+AGG - chr8_3:60389235-60389254 Msa1299290:CDS 20.0%
!! AAATTTGGATTATGCAAATA+TGG - chr8_3:60389450-60389469 Msa1299290:intron 20.0%
!! GAATAAAAAAGAAAGAAAGA+AGG - chr8_3:60389585-60389604 Msa1299290:intron 20.0%
!! TAATATTAATTTAGAAGCCT+AGG - chr8_3:60389874-60389893 Msa1299290:intron 20.0%
!! TTACGATTTGATAAGATTTA+CGG + chr8_3:60390199-60390218 None:intergenic 20.0%
!! AAGTTAGTAGTATTAATTAG+GGG + chr8_3:60391181-60391200 None:intergenic 20.0%
!! CAAGTTAGTAGTATTAATTA+GGG + chr8_3:60391182-60391201 None:intergenic 20.0%
!! ACAAGTTAGTAGTATTAATT+AGG + chr8_3:60391183-60391202 None:intergenic 20.0%
!! TTTAATACACATACAAACAA+AGG - chr8_3:60391224-60391243 Msa1299290:intron 20.0%
!!! TAGTGTTGTTGATATTTTTT+TGG - chr8_3:60391998-60392017 Msa1299290:intron 20.0%
!! CTATTGAAATAAACTTGTAA+CGG - chr8_3:60392070-60392089 Msa1299290:intron 20.0%
!! TATTGAAATAAACTTGTAAC+GGG - chr8_3:60392071-60392090 Msa1299290:intron 20.0%
!! ATCAGATTTAGATAATCAAT+AGG + chr8_3:60392342-60392361 None:intergenic 20.0%
!!! TATCTAAATCTGATATCTTT+TGG - chr8_3:60392348-60392367 Msa1299290:intron 20.0%
!! AAACTACACAAAAACAAATT+GGG + chr8_3:60392466-60392485 None:intergenic 20.0%
!! TAAACTACACAAAAACAAAT+TGG + chr8_3:60392467-60392486 None:intergenic 20.0%
!! TCAAATATGAAAAAGAAGTT+CGG + chr8_3:60392920-60392939 None:intergenic 20.0%
!!! ACTTCTTTTTCATATTTGAT+TGG - chr8_3:60392921-60392940 Msa1299290:intron 20.0%
!! CATGAAAACTGATTAAATAA+AGG + chr8_3:60392986-60393005 None:intergenic 20.0%
!!! TCATTTTTAGTTAATGACTT+AGG - chr8_3:60393431-60393450 Msa1299290:intron 20.0%
!! CAATAAATACATACAATTTC+AGG + chr8_3:60393499-60393518 None:intergenic 20.0%
!!! AAGACTTTTAAATGTTCAAT+TGG - chr8_3:60393738-60393757 Msa1299290:intron 20.0%
!!! AGACTTTTAAATGTTCAATT+GGG - chr8_3:60393739-60393758 Msa1299290:intron 20.0%
!! TGTTTAAAAACAATGAAAAC+TGG + chr8_3:60393812-60393831 None:intergenic 20.0%
!! TGTTAAGATATAATAACAAC+AGG + chr8_3:60394049-60394068 None:intergenic 20.0%
!!! TTTCAAAACAATTTTGAACT+AGG + chr8_3:60394738-60394757 None:intergenic 20.0%
!!! TGCAAACAACAAAATTATTT+TGG + chr8_3:60394875-60394894 None:intergenic 20.0%
!! ATTAAGAAATGGCTAATTTA+AGG + chr8_3:60395069-60395088 None:intergenic 20.0%
!!! TTGCAAAACTGTTTTAATTA+TGG - chr8_3:60395184-60395203 Msa1299290:intron 20.0%
!! AGTGAAGTCAATTAATTATT+TGG + chr8_3:60395290-60395309 None:intergenic 20.0%
!! ATAATTTATAAGACCTTGAA+AGG - chr8_3:60395839-60395858 Msa1299290:five_prime_UTR 20.0%
!!! TGGTTTTTCTAAAAACAAAT+GGG - chr8_3:60395911-60395930 Msa1299290:five_prime_UTR 20.0%
! TAGAGATAGATAAATAAACG+GGG + chr8_3:60389172-60389191 None:intergenic 25.0%
! TTAACAAGGAAATTTCTGAA+AGG - chr8_3:60389249-60389268 Msa1299290:CDS 25.0%
!! TAACAAGGAAATTTCTGAAA+GGG - chr8_3:60389250-60389269 Msa1299290:CDS 25.0%
! TAAGTCAGTATTTGGATAAA+CGG + chr8_3:60389510-60389529 None:intergenic 25.0%
!!! ACATTTTTGCTTTGTTGTTT+TGG - chr8_3:60389556-60389575 Msa1299290:intron 25.0%
! GTATAAGGTTGCAAAATAAA+TGG + chr8_3:60389838-60389857 None:intergenic 25.0%
!! ACTTGTGAAAACTAATTTTC+AGG - chr8_3:60390118-60390137 Msa1299290:intron 25.0%
!! CTTGTGAAAACTAATTTTCA+GGG - chr8_3:60390119-60390138 Msa1299290:intron 25.0%
! AAATCAAATATAGAACTGCT+AGG - chr8_3:60390159-60390178 Msa1299290:intron 25.0%
!! TTTTATTCCAAAATGTGGTA+TGG - chr8_3:60390362-60390381 Msa1299290:CDS 25.0%
!!! TCATACATATCTGTTTTGTT+GGG - chr8_3:60390613-60390632 Msa1299290:CDS 25.0%
! TAATGTAGAGGAATAAAAAG+TGG + chr8_3:60390639-60390658 None:intergenic 25.0%
! AAATCTGAAAAGTAATGTAG+AGG + chr8_3:60390651-60390670 None:intergenic 25.0%
! ATTCAGTTAATGTTCTTTCA+AGG - chr8_3:60390900-60390919 Msa1299290:intron 25.0%
!!! GGACAAATTTTTAGTCAAAT+GGG + chr8_3:60391102-60391121 None:intergenic 25.0%
! TGAAAAGAGGCTTATATTTA+GGG + chr8_3:60391123-60391142 None:intergenic 25.0%
! TTGAAAAGAGGCTTATATTT+AGG + chr8_3:60391124-60391143 None:intergenic 25.0%
!! CAATTAATGTGTCTATTTTG+TGG + chr8_3:60391268-60391287 None:intergenic 25.0%
! AAGAAATGTGAAAAATGCAA+AGG - chr8_3:60391305-60391324 Msa1299290:intron 25.0%
! AGAAATGTGAAAAATGCAAA+GGG - chr8_3:60391306-60391325 Msa1299290:intron 25.0%
!!! ATGATGTTTTATGATGGAAA+TGG - chr8_3:60391616-60391635 Msa1299290:CDS 25.0%
! TAATTAGCAATCACTCTATA+CGG + chr8_3:60391861-60391880 None:intergenic 25.0%
!!! TTTTTTGGTCCAATGTAAAA+AGG - chr8_3:60392013-60392032 Msa1299290:intron 25.0%
!! AAGGAAAAAGCATAACTTTA+TGG - chr8_3:60392164-60392183 Msa1299290:intron 25.0%
! AAAAACTTAAATCATACCTC+TGG + chr8_3:60392580-60392599 None:intergenic 25.0%
! GAAGAAGAATAAGAATAAGA+TGG + chr8_3:60392630-60392649 None:intergenic 25.0%
!!! AACTCTAGTTTTGTAAGAAT+AGG + chr8_3:60392652-60392671 None:intergenic 25.0%
!!! TACTAACTGATTTTTACTAC+AGG - chr8_3:60392700-60392719 Msa1299290:intron 25.0%
! TCTGAATGTATAAGTATGAA+AGG - chr8_3:60393472-60393491 Msa1299290:intron 25.0%
!! TATTGAAAGTTTAGAAGCAT+CGG - chr8_3:60393514-60393533 Msa1299290:intron 25.0%
! TATCTTAACAAAAGCTTCTA+TGG - chr8_3:60394059-60394078 Msa1299290:intron 25.0%
! GATTTAACATATGATGGTTT+CGG + chr8_3:60394564-60394583 None:intergenic 25.0%
!!! ACAACAAAATTATTTTGGTC+TGG + chr8_3:60394870-60394889 None:intergenic 25.0%
! AAATAACAGATCAAGTACAA+AGG + chr8_3:60394910-60394929 None:intergenic 25.0%
!! ATGCTTTATTATTTCTCTGT+TGG - chr8_3:60395087-60395106 Msa1299290:intron 25.0%
! TAATTGCTCTTATATAGTCT+GGG - chr8_3:60395476-60395495 Msa1299290:intron 25.0%
!! AAAAGAATTTGTCATTTGAG+TGG + chr8_3:60395809-60395828 None:intergenic 25.0%
!!! CTGGTTTTTCTAAAAACAAA+TGG - chr8_3:60395910-60395929 Msa1299290:five_prime_UTR 25.0%
TCATTACATTACGTTAACAG+TGG - chr8_3:60389086-60389105 Msa1299290:intron 30.0%
! CTATTTGAAATCTCTTCATC+AGG - chr8_3:60389189-60389208 Msa1299290:three_prime_UTR 30.0%
! AAACAATCGAATTTTCGAAG+AGG - chr8_3:60389215-60389234 Msa1299290:three_prime_UTR 30.0%
TTCGCAAAAAGGAATTGAAA+AGG - chr8_3:60389359-60389378 Msa1299290:CDS 30.0%
TCGCAAAAAGGAATTGAAAA+GGG - chr8_3:60389360-60389379 Msa1299290:CDS 30.0%
TCAGTGATTAAGTCAGTATT+TGG + chr8_3:60389518-60389537 None:intergenic 30.0%
AAAAAGAAAGAAAGAAGGTG+AGG - chr8_3:60389590-60389609 Msa1299290:intron 30.0%
AAAAGAAAGAAAGAAGGTGA+GGG - chr8_3:60389591-60389610 Msa1299290:intron 30.0%
!! AATTTCACCCTCATTTTTGT+TGG - chr8_3:60389735-60389754 Msa1299290:intron 30.0%
GACTATACCAACAAAAATGA+GGG + chr8_3:60389745-60389764 None:intergenic 30.0%
TGACTATACCAACAAAAATG+AGG + chr8_3:60389746-60389765 None:intergenic 30.0%
!! AAAACTAATTTTCAGGGAGT+AGG - chr8_3:60390125-60390144 Msa1299290:intron 30.0%
TGGAATAAAAGTGGAATACT+GGG + chr8_3:60390352-60390371 None:intergenic 30.0%
TTGGAATAAAAGTGGAATAC+TGG + chr8_3:60390353-60390372 None:intergenic 30.0%
!! TCCACTTTTATTCCAAAATG+TGG - chr8_3:60390357-60390376 Msa1299290:CDS 30.0%
!!! ACCACATTTTGGAATAAAAG+TGG + chr8_3:60390361-60390380 None:intergenic 30.0%
! CTCATACATATCTGTTTTGT+TGG - chr8_3:60390612-60390631 Msa1299290:CDS 30.0%
CATCAAGAGAAAACAGATAT+TGG + chr8_3:60390755-60390774 None:intergenic 30.0%
AGAATTTCCTTTACTTCTTC+GGG + chr8_3:60390851-60390870 None:intergenic 30.0%
CAGAATTTCCTTTACTTCTT+CGG + chr8_3:60390852-60390871 None:intergenic 30.0%
CAAATGGGTGCTTATATATA+GGG + chr8_3:60391087-60391106 None:intergenic 30.0%
TCAAATGGGTGCTTATATAT+AGG + chr8_3:60391088-60391107 None:intergenic 30.0%
!!! GGGACAAATTTTTAGTCAAA+TGG + chr8_3:60391103-60391122 None:intergenic 30.0%
GCATCTAGTAATTTGAAAAG+AGG + chr8_3:60391136-60391155 None:intergenic 30.0%
CATACAAACAAAGGACAATT+TGG - chr8_3:60391233-60391252 Msa1299290:intron 30.0%
GAAATGTGAAAAATGCAAAG+GGG - chr8_3:60391307-60391326 Msa1299290:intron 30.0%
AAATGTGAAAAATGCAAAGG+GGG - chr8_3:60391308-60391327 Msa1299290:intron 30.0%
CTCTTAGTGATACTTATCTA+TGG + chr8_3:60391430-60391449 None:intergenic 30.0%
CTCTTAGTGATACTTATCTA+TGG + chr8_3:60391430-60391449 None:intergenic 30.0%
ACTGATAAATTACCACTTAG+AGG + chr8_3:60391518-60391537 None:intergenic 30.0%
! GACACTATGATGTTTTATGA+TGG - chr8_3:60391610-60391629 Msa1299290:CDS 30.0%
!!! ACCTTAGAATGACAGTTTTT+TGG - chr8_3:60391640-60391659 Msa1299290:CDS 30.0%
TATATGTTCTCTTGGTTATG+AGG + chr8_3:60391747-60391766 None:intergenic 30.0%
GGTTTATCATAATCTGTAAG+TGG - chr8_3:60391975-60391994 Msa1299290:intron 30.0%
! AAAGGACAACCTTTTTACAT+TGG + chr8_3:60392025-60392044 None:intergenic 30.0%
! GTTCACCAAAAAAAAAGCAT+GGG + chr8_3:60392124-60392143 None:intergenic 30.0%
TGTTCACCAAAAAAAAAGCA+TGG + chr8_3:60392125-60392144 None:intergenic 30.0%
TTCAAGTCTTGATTGGTAAA+AGG - chr8_3:60392145-60392164 Msa1299290:intron 30.0%
AAAATACAAATGCACAACAC+AGG + chr8_3:60392242-60392261 None:intergenic 30.0%
! AAATCTGATATCTTTTGGAC+AGG - chr8_3:60392353-60392372 Msa1299290:intron 30.0%
AGGAATATGATGAGAAAAAG+CGG - chr8_3:60392373-60392392 Msa1299290:intron 30.0%
TTGTGTAGTTTATAAGTCCT+TGG - chr8_3:60392475-60392494 Msa1299290:intron 30.0%
TTACAAAACTAGAGTTGTCT+AGG - chr8_3:60392656-60392675 Msa1299290:intron 30.0%
TAATTCAAAAGGATTCAGTG+TGG - chr8_3:60393567-60393586 Msa1299290:intron 30.0%
AATTCAAAAGGATTCAGTGT+GGG - chr8_3:60393568-60393587 Msa1299290:intron 30.0%
!! GCTGATGTTTTTCAAAATGT+AGG - chr8_3:60393594-60393613 Msa1299290:intron 30.0%
GTCAATTCATGCTTCATATA+TGG - chr8_3:60393944-60393963 Msa1299290:intron 30.0%
ACTAAGAGCAATCAAAAGTA+AGG + chr8_3:60394014-60394033 None:intergenic 30.0%
!!! TTTTTTTCACCCTGAAATGT+AGG - chr8_3:60394092-60394111 Msa1299290:intron 30.0%
GAAATGGCTAATTTAAGGAA+TGG + chr8_3:60395064-60395083 None:intergenic 30.0%
!! TATTATTTCTCTGTTGGTTC+TGG - chr8_3:60395093-60395112 Msa1299290:intron 30.0%
AACAAACTAGGACAAATTAG+TGG - chr8_3:60395161-60395180 Msa1299290:intron 30.0%
GTAATTGCTCTTATATAGTC+TGG - chr8_3:60395475-60395494 Msa1299290:intron 30.0%
!!! TGGGTCATGTTTTTTTTACT+AGG - chr8_3:60395495-60395514 Msa1299290:intron 30.0%
!!! AGATGGTTTTGGTTTTGTTT+TGG + chr8_3:60395560-60395579 None:intergenic 30.0%
!!! GACTCTGCTTTTAAAATAGT+TGG + chr8_3:60395634-60395653 None:intergenic 30.0%
!! TGATTCTTCGTTGTTTCTCA+CGG + chr8_3:60389069-60389088 None:intergenic 35.0%
! TTTCTGAAAGGGTGAGAATT+AGG - chr8_3:60389261-60389280 Msa1299290:CDS 35.0%
! TTCTGAAAGGGTGAGAATTA+GGG - chr8_3:60389262-60389281 Msa1299290:CDS 35.0%
CAAGAAGCAGATTGAGAATT+TGG - chr8_3:60389648-60389667 Msa1299290:intron 35.0%
!!! TAACTAGCTTTTGCATTCCA+AGG - chr8_3:60389706-60389725 Msa1299290:intron 35.0%
! GCAAAATAAATGGCTTGCAT+TGG + chr8_3:60389828-60389847 None:intergenic 35.0%
TGGAATCTTATGTGACACAT+GGG - chr8_3:60389914-60389933 Msa1299290:intron 35.0%
AGTTGGTTAGAAATCTCACT+AGG - chr8_3:60389946-60389965 Msa1299290:intron 35.0%
GTTGGTTAGAAATCTCACTA+GGG - chr8_3:60389947-60389966 Msa1299290:intron 35.0%
GATTACTCTAGTAGTTGTCT+GGG - chr8_3:60390070-60390089 Msa1299290:intron 35.0%
GGAATAAAAGTGGAATACTG+GGG + chr8_3:60390351-60390370 None:intergenic 35.0%
! GTTATGTCCATACCACATTT+TGG + chr8_3:60390372-60390391 None:intergenic 35.0%
! AAGCAAGAAAGCACAAAAAG+AGG - chr8_3:60390540-60390559 Msa1299290:CDS 35.0%
! AACTGACTTCTGGATTATTG+AGG - chr8_3:60390729-60390748 Msa1299290:CDS 35.0%
! GTTTTCTCTTGATGAGACTA+TGG - chr8_3:60390761-60390780 Msa1299290:CDS 35.0%
GTATGGGAAAGAAGTTTGAT+AGG + chr8_3:60390829-60390848 None:intergenic 35.0%
CGAAGAAGTAAAGGAAATTC+TGG - chr8_3:60390850-60390869 Msa1299290:CDS 35.0%
!!! CTGCTGATACATGTGTTTTT+TGG - chr8_3:60391008-60391027 Msa1299290:intron 35.0%
! GGGAGTATGTGATAACATTA+CGG + chr8_3:60391059-60391078 None:intergenic 35.0%
GTATCACTAAGAGTAGATGA+AGG - chr8_3:60391471-60391490 Msa1299290:intron 35.0%
AGGCAATGATAAACCTAAGA+GGG + chr8_3:60391498-60391517 None:intergenic 35.0%
GCCAAAAAACTGTCATTCTA+AGG + chr8_3:60391644-60391663 None:intergenic 35.0%
CCAAGCAGTATTATCAATTG+CGG + chr8_3:60391670-60391689 None:intergenic 35.0%
TGATCAGAGTATGACAGAAA+TGG - chr8_3:60391691-60391710 Msa1299290:CDS 35.0%
GATCAGAGTATGACAGAAAT+GGG - chr8_3:60391692-60391711 Msa1299290:CDS 35.0%
! AACAAAGTGCTTGTTTCAAC+TGG + chr8_3:60391897-60391916 None:intergenic 35.0%
!!! ACAGACCCATGCTTTTTTTT+TGG - chr8_3:60392116-60392135 Msa1299290:CDS 35.0%
GTGAACATTCAAGTCTTGAT+TGG - chr8_3:60392138-60392157 Msa1299290:intron 35.0%
AAATCATGCATACAGTTGAC+TGG + chr8_3:60392307-60392326 None:intergenic 35.0%
GGAATATGATGAGAAAAAGC+GGG - chr8_3:60392374-60392393 Msa1299290:intron 35.0%
! ATGTCTTTTGAGCAGTCATT+TGG - chr8_3:60392498-60392517 Msa1299290:intron 35.0%
! TGTCTTTTGAGCAGTCATTT+GGG - chr8_3:60392499-60392518 Msa1299290:intron 35.0%
! AGTTGTCTAGGTGTTGTAAA+TGG - chr8_3:60392668-60392687 Msa1299290:intron 35.0%
TTACAAAACTAGAGTTGTCC+AGG - chr8_3:60392765-60392784 Msa1299290:intron 35.0%
! AGTTGTCCAGGTGTTATAAA+TGG - chr8_3:60392777-60392796 Msa1299290:intron 35.0%
TCGAAACCATTTATAACACC+TGG + chr8_3:60392786-60392805 None:intergenic 35.0%
TACAGCTAATACACCATCAT+CGG + chr8_3:60393083-60393102 None:intergenic 35.0%
CTAAAGAGCAAGCTGTAAAT+CGG - chr8_3:60393275-60393294 Msa1299290:intron 35.0%
TCCTTGGAAGATAGATTATC+TGG + chr8_3:60393394-60393413 None:intergenic 35.0%
ATTCAAAAGGATTCAGTGTG+GGG - chr8_3:60393569-60393588 Msa1299290:intron 35.0%
CAAAATGTAGGATGTGAGTA+TGG - chr8_3:60393606-60393625 Msa1299290:intron 35.0%
ACTATCTGATATCTGATCTC+AGG - chr8_3:60393898-60393917 Msa1299290:intron 35.0%
CATGAATTGACAAAAACCTG+TGG + chr8_3:60393935-60393954 None:intergenic 35.0%
ATGCTTCATATATGGCTACT+AGG - chr8_3:60393952-60393971 Msa1299290:intron 35.0%
! AAAGTAAGGTGTTCCCATTT+GGG + chr8_3:60394000-60394019 None:intergenic 35.0%
! AAAAGTAAGGTGTTCCCATT+TGG + chr8_3:60394001-60394020 None:intergenic 35.0%
! TGAATAGCACCAGAATTTTG+TGG + chr8_3:60394156-60394175 None:intergenic 35.0%
TAAGCATTCTTTGTCAAACC+AGG - chr8_3:60394206-60394225 Msa1299290:intron 35.0%
AAACCAGGAGATCCAAAAAT+TGG - chr8_3:60394221-60394240 Msa1299290:intron 35.0%
! AGATCCAAAAATTGGTTCCT+GGG - chr8_3:60394229-60394248 Msa1299290:intron 35.0%
GCAGCAGATTTAACATATGA+TGG + chr8_3:60394570-60394589 None:intergenic 35.0%
CTGCTTCTACTGTTGTTAAA+AGG - chr8_3:60394586-60394605 Msa1299290:intron 35.0%
AACAGATCAAGTACAAAGGT+TGG + chr8_3:60394906-60394925 None:intergenic 35.0%
TAAGGAATGGATCGGTAATA+CGG + chr8_3:60395051-60395070 None:intergenic 35.0%
GGCTAATTTAAGGAATGGAT+CGG + chr8_3:60395059-60395078 None:intergenic 35.0%
GGTGAACAAGTAAACAAACT+AGG - chr8_3:60395149-60395168 Msa1299290:intron 35.0%
! TAATTGACTTCACTGCTACA+TGG - chr8_3:60395296-60395315 Msa1299290:intron 35.0%
! AATTGACTTCACTGCTACAT+GGG - chr8_3:60395297-60395316 Msa1299290:intron 35.0%
!! ATTCAAGTGTCGAGAAAAGT+TGG - chr8_3:60395327-60395346 Msa1299290:CDS 35.0%
!! ACAAATGATGCCACTTTAAG+TGG + chr8_3:60395431-60395450 None:intergenic 35.0%
! ACTGTTGATACAGATGGTTT+TGG + chr8_3:60395571-60395590 None:intergenic 35.0%
TAGAATTACACGACCTTTCA+AGG + chr8_3:60395855-60395874 None:intergenic 35.0%
TCGACTTAAACTAAAGAGAG+CGG + chr8_3:60395886-60395905 None:intergenic 35.0%
! TTTAGTTTAAGTCGACGTAC+TGG - chr8_3:60395891-60395910 Msa1299290:five_prime_UTR 35.0%
! TTATTGGGCTGGATCTGATT+CGG - chr8_3:60389032-60389051 Msa1299290:three_prime_UTR 40.0%
!! ATTCTTCGTTGTTTCTCACG+GGG + chr8_3:60389067-60389086 None:intergenic 40.0%
!! GATTCTTCGTTGTTTCTCAC+GGG + chr8_3:60389068-60389087 None:intergenic 40.0%
! AGGGTGAGAATTAGGGTTTT+CGG - chr8_3:60389269-60389288 Msa1299290:CDS 40.0%
TCAATGACGAAGACCACTAA+AGG - chr8_3:60389295-60389314 Msa1299290:CDS 40.0%
AAGCTCCTTTCGATAAGCAT+CGG + chr8_3:60389341-60389360 None:intergenic 40.0%
!! ATCTGCTTCTTGAGTTGATC+AGG + chr8_3:60389640-60389659 None:intergenic 40.0%
GTGGAATCTTATGTGACACA+TGG - chr8_3:60389913-60389932 Msa1299290:intron 40.0%
TCTTATGTGACACATGGGAA+TGG - chr8_3:60389919-60389938 Msa1299290:intron 40.0%
CTTATGTGACACATGGGAAT+GGG - chr8_3:60389920-60389939 Msa1299290:intron 40.0%
! AACATAGTGGAGTGTTAAGC+TGG + chr8_3:60390021-60390040 None:intergenic 40.0%
AGCTTAACACTCCACTATGT+TGG - chr8_3:60390020-60390039 Msa1299290:intron 40.0%
! TACACCTTTTGCCAACATAG+TGG + chr8_3:60390034-60390053 None:intergenic 40.0%
! TATGTTGGCAAAAGGTGTAC+CGG - chr8_3:60390035-60390054 Msa1299290:intron 40.0%
! AGTAATCCTTTTGCAATGCC+CGG + chr8_3:60390057-60390076 None:intergenic 40.0%
GGATTACTCTAGTAGTTGTC+TGG - chr8_3:60390069-60390088 Msa1299290:intron 40.0%
AAAAGTGGAATACTGGGGTA+GGG + chr8_3:60390346-60390365 None:intergenic 40.0%
TAAAAGTGGAATACTGGGGT+AGG + chr8_3:60390347-60390366 None:intergenic 40.0%
! CAATCCTTTAGTTGTTTCCC+TGG - chr8_3:60390391-60390410 Msa1299290:CDS 40.0%
TACACTACTAATGCATGCCA+GGG + chr8_3:60390411-60390430 None:intergenic 40.0%
TTACACTACTAATGCATGCC+AGG + chr8_3:60390412-60390431 None:intergenic 40.0%
GTGCTTTCTTGCTTTATCCA+AGG + chr8_3:60390534-60390553 None:intergenic 40.0%
! TCGTGTCATTAAGAAGCAGA+AGG - chr8_3:60390583-60390602 Msa1299290:CDS 40.0%
! AAACAGTGAGAACTGACTTC+TGG - chr8_3:60390719-60390738 Msa1299290:CDS 40.0%
TCCTTTACTTCTTCGGGTAT+GGG + chr8_3:60390845-60390864 None:intergenic 40.0%
TTCCTTTACTTCTTCGGGTA+TGG + chr8_3:60390846-60390865 None:intergenic 40.0%
!! TCAAGGTAGAAACTTGCTAC+TGG - chr8_3:60390917-60390936 Msa1299290:intron 40.0%
GTGATCAGTACTCTCTGAAT+TGG + chr8_3:60390979-60390998 None:intergenic 40.0%
TGCTTATATATAGGGACGGA+GGG + chr8_3:60391079-60391098 None:intergenic 40.0%
TGGGTGCTTATATATAGGGA+CGG + chr8_3:60391083-60391102 None:intergenic 40.0%
TGCAAAGGGGGCTTATATAT+AGG - chr8_3:60391320-60391339 Msa1299290:intron 40.0%
GCAAAGGGGGCTTATATATA+GGG - chr8_3:60391321-60391340 Msa1299290:intron 40.0%
! ACCATTTGTAACTTGCAGAG+TGG - chr8_3:60391386-60391405 Msa1299290:intron 40.0%
ACCACTCTGCAAGTTACAAA+TGG + chr8_3:60391390-60391409 None:intergenic 40.0%
GTATCACTAAGAGTAGCTGA+AGG - chr8_3:60391437-60391456 Msa1299290:intron 40.0%
GAGGCAATGATAAACCTAAG+AGG + chr8_3:60391499-60391518 None:intergenic 40.0%
GGTTTATCATTGCCTCTAAG+TGG - chr8_3:60391503-60391522 Msa1299290:intron 40.0%
GGTAATTTATCAGTGCTGTC+AGG - chr8_3:60391524-60391543 Msa1299290:intron 40.0%
!!! GATTTTTTCGCCTACTGCTA+TGG - chr8_3:60391568-60391587 Msa1299290:CDS 40.0%
TATGGCCCATTTACGAAGAA+AGG - chr8_3:60391586-60391605 Msa1299290:CDS 40.0%
TGTCGCCTTTCTTCGTAAAT+GGG + chr8_3:60391594-60391613 None:intergenic 40.0%
GCAGTATTATCAATTGCGGA+AGG + chr8_3:60391666-60391685 None:intergenic 40.0%
! CCGCAATTGATAATACTGCT+TGG - chr8_3:60391667-60391686 Msa1299290:CDS 40.0%
GTGCTTGGTATATGTTCTCT+TGG + chr8_3:60391755-60391774 None:intergenic 40.0%
TTTGCATCAGAACATGTGCT+TGG + chr8_3:60391770-60391789 None:intergenic 40.0%
TTCCACTAACAGTAGCTGAA+GGG - chr8_3:60391944-60391963 Msa1299290:CDS 40.0%
TTGCTCACCTGAACATAACA+GGG + chr8_3:60392413-60392432 None:intergenic 40.0%
ATTGCTCACCTGAACATAAC+AGG + chr8_3:60392414-60392433 None:intergenic 40.0%
! GTCTTTTGAGCAGTCATTTG+GGG - chr8_3:60392500-60392519 Msa1299290:intron 40.0%
TAAATCATACCTCTGGCTGT+GGG + chr8_3:60392573-60392592 None:intergenic 40.0%
TTAAATCATACCTCTGGCTG+TGG + chr8_3:60392574-60392593 None:intergenic 40.0%
CATCCTCAATTAAATCCCAC+CGG - chr8_3:60392845-60392864 Msa1299290:intron 40.0%
ATCCTCAATTAAATCCCACC+GGG - chr8_3:60392846-60392865 Msa1299290:intron 40.0%
CCTATAGGCGAATGATACAT+GGG + chr8_3:60392893-60392912 None:intergenic 40.0%
ACCTATAGGCGAATGATACA+TGG + chr8_3:60392894-60392913 None:intergenic 40.0%
AAGAAGTTCGGCATACCTAT+AGG + chr8_3:60392908-60392927 None:intergenic 40.0%
! TTTACAGCTTGCTCTTTAGG+TGG + chr8_3:60393274-60393293 None:intergenic 40.0%
! CGATTTACAGCTTGCTCTTT+AGG + chr8_3:60393277-60393296 None:intergenic 40.0%
ATTTCTCTCTTCACCTTCAC+TGG + chr8_3:60393359-60393378 None:intergenic 40.0%
GCCAGATAATCTATCTTCCA+AGG - chr8_3:60393390-60393409 Msa1299290:intron 40.0%
TGACAAAAACCTGTGGCATA+TGG + chr8_3:60393928-60393947 None:intergenic 40.0%
ATAGTTGCCAAATGCCCAAA+TGG - chr8_3:60393983-60394002 Msa1299290:intron 40.0%
TAGTTGCCAAATGCCCAAAT+GGG - chr8_3:60393984-60394003 Msa1299290:intron 40.0%
! GAATTTTGTGGCATACGACT+TGG + chr8_3:60394144-60394163 None:intergenic 40.0%
AGTCGTATGCCACAAAATTC+TGG - chr8_3:60394144-60394163 Msa1299290:intron 40.0%
!! TCTGGTGCTATTCAGTTTGA+TGG - chr8_3:60394162-60394181 Msa1299290:intron 40.0%
!! GAACCAATTTTTGGATCTCC+TGG + chr8_3:60394227-60394246 None:intergenic 40.0%
! GAGATCCAAAAATTGGTTCC+TGG - chr8_3:60394228-60394247 Msa1299290:intron 40.0%
TATTGCCTCCTGGAATATCT+CGG - chr8_3:60394316-60394335 Msa1299290:intron 40.0%
TGATCCTCTTCCTGAAAGTT+CGG + chr8_3:60394516-60394535 None:intergenic 40.0%
CTTTCAGGAAGAGGATCATA+TGG - chr8_3:60394518-60394537 Msa1299290:intron 40.0%
AAGAGGATCATATGGCAACT+AGG - chr8_3:60394526-60394545 Msa1299290:intron 40.0%
CTTACCATAGATGTGAGTTC+TGG + chr8_3:60394630-60394649 None:intergenic 40.0%
! GTGTACTTAACAGAGGTATG+GGG + chr8_3:60394716-60394735 None:intergenic 40.0%
! GGTGTACTTAACAGAGGTAT+GGG + chr8_3:60394717-60394736 None:intergenic 40.0%
AGGTGTACTTAACAGAGGTA+TGG + chr8_3:60394718-60394737 None:intergenic 40.0%
GAACTAGGTGTACTTAACAG+AGG + chr8_3:60394723-60394742 None:intergenic 40.0%
TGTAGGAGCTTATATCTCCA+TGG - chr8_3:60394974-60394993 Msa1299290:intron 40.0%
! TATTGTTGCTTGTGCATGGA+GGG + chr8_3:60395028-60395047 None:intergenic 40.0%
!! TGTCGAGAAAAGTTGGCTTT+AGG - chr8_3:60395334-60395353 Msa1299290:CDS 40.0%
!! GAAAAGTTGGCTTTAGGTAG+TGG - chr8_3:60395340-60395359 Msa1299290:CDS 40.0%
ACAGATACGACCACTTAAAG+TGG - chr8_3:60395418-60395437 Msa1299290:intron 40.0%
ACTGACACTGTTGATACAGA+TGG + chr8_3:60395577-60395596 None:intergenic 40.0%
!!! GCTTTTAAAATAGTTGGCCC+AGG + chr8_3:60395628-60395647 None:intergenic 40.0%
!!! TCATCAATGCTTGGTGCTTT+TGG + chr8_3:60395676-60395695 None:intergenic 40.0%
GTGTATGAGTCATCAATGCT+TGG + chr8_3:60395685-60395704 None:intergenic 40.0%
CTCATACACAGCTTTCTTAG+AGG - chr8_3:60395696-60395715 Msa1299290:five_prime_UTR 40.0%
CGACTTAAACTAAAGAGAGC+GGG + chr8_3:60395885-60395904 None:intergenic 40.0%
GATCCAGCCCAATAAACCTT+TGG + chr8_3:60389027-60389046 None:intergenic 45.0%
! TATTGGGCTGGATCTGATTC+GGG - chr8_3:60389033-60389052 Msa1299290:three_prime_UTR 45.0%
!! TTCTTCGTTGTTTCTCACGG+GGG + chr8_3:60389066-60389085 None:intergenic 45.0%
ATGACGAAGACCACTAAAGG+CGG - chr8_3:60389298-60389317 Msa1299290:CDS 45.0%
!! CCTTTCGATAAGCATCGGTA+GGG + chr8_3:60389336-60389355 None:intergenic 45.0%
!! TCCTTTCGATAAGCATCGGT+AGG + chr8_3:60389337-60389356 None:intergenic 45.0%
TCGAAAGGAGCTTCGCAAAA+AGG - chr8_3:60389348-60389367 Msa1299290:CDS 45.0%
AAGAAAGAAGGTGAGGGATG+TGG - chr8_3:60389597-60389616 Msa1299290:intron 45.0%
AGAAAGAAGGTGAGGGATGT+GGG - chr8_3:60389598-60389617 Msa1299290:intron 45.0%
! GCTTTTGCATTCCAAGGAAC+TGG - chr8_3:60389712-60389731 Msa1299290:intron 45.0%
AGGGTGAAATTCCAGTTCCT+TGG + chr8_3:60389726-60389745 None:intergenic 45.0%
CACATGGGAATGGGAATAGT+TGG - chr8_3:60389929-60389948 Msa1299290:intron 45.0%
!! TAAGCTGGTTTGGCGGTTTA+GGG + chr8_3:60390006-60390025 None:intergenic 45.0%
!! TTAAGCTGGTTTGGCGGTTT+AGG + chr8_3:60390007-60390026 None:intergenic 45.0%
! AGTGGAGTGTTAAGCTGGTT+TGG + chr8_3:60390016-60390035 None:intergenic 45.0%
CACTCCACTATGTTGGCAAA+AGG - chr8_3:60390027-60390046 Msa1299290:intron 45.0%
! ATGTTGGCAAAAGGTGTACC+GGG - chr8_3:60390036-60390055 Msa1299290:intron 45.0%
CATGCCAGGGAAACAACTAA+AGG + chr8_3:60390398-60390417 None:intergenic 45.0%
! AGTGCGCAGTGGTTTTCAAT+AGG + chr8_3:60390485-60390504 None:intergenic 45.0%
!! TTTGTTGTTGCAGAGGCTGA+TGG - chr8_3:60390506-60390525 Msa1299290:CDS 45.0%
CTGCAAACTTGATACGCTCA+GGG + chr8_3:60390799-60390818 None:intergenic 45.0%
TCTGCAAACTTGATACGCTC+AGG + chr8_3:60390800-60390819 None:intergenic 45.0%
TGAGCGTATCAAGTTTGCAG+AGG - chr8_3:60390799-60390818 Msa1299290:CDS 45.0%
GAGCGTATCAAGTTTGCAGA+GGG - chr8_3:60390800-60390819 Msa1299290:CDS 45.0%
TCCCATACCCGAAGAAGTAA+AGG - chr8_3:60390841-60390860 Msa1299290:CDS 45.0%
GTGCTTATATATAGGGACGG+AGG + chr8_3:60391080-60391099 None:intergenic 45.0%
AGGGGGCTTATATATAGGGA+CGG - chr8_3:60391325-60391344 Msa1299290:intron 45.0%
GGCTTATATATAGGGACGGA+GGG - chr8_3:60391329-60391348 Msa1299290:intron 45.0%
AGTAGATGAAGGTCCCTCTT+AGG - chr8_3:60391482-60391501 Msa1299290:intron 45.0%
GTGTCGCCTTTCTTCGTAAA+TGG + chr8_3:60391595-60391614 None:intergenic 45.0%
GACGTACAATTCTTCTCCGT+AGG - chr8_3:60391917-60391936 Msa1299290:CDS 45.0%
CTGTTAGTGGAACTTGCCTA+CGG + chr8_3:60391936-60391955 None:intergenic 45.0%
GTTCCACTAACAGTAGCTGA+AGG - chr8_3:60391943-60391962 Msa1299290:CDS 45.0%
AGTAGCTGAAGGGACGTATT+GGG - chr8_3:60391954-60391973 Msa1299290:intron 45.0%
! GGTTGTCCTTTTGTAGCCAT+AGG - chr8_3:60392034-60392053 Msa1299290:intron 45.0%
TTGCAGCCTATGGCTACAAA+AGG + chr8_3:60392043-60392062 None:intergenic 45.0%
TAGAAACGCATTGCAGCCTA+TGG + chr8_3:60392053-60392072 None:intergenic 45.0%
TGATGAGAAAAAGCGGGAGA+AGG - chr8_3:60392380-60392399 Msa1299290:intron 45.0%
GATGAGAAAAAGCGGGAGAA+GGG - chr8_3:60392381-60392400 Msa1299290:intron 45.0%
TGCTCACCTGAACATAACAG+GGG + chr8_3:60392412-60392431 None:intergenic 45.0%
GACTGCTCAAAAGACATCCA+AGG + chr8_3:60392495-60392514 None:intergenic 45.0%
TCTGCACTTGTTCTCCTTTG+TGG + chr8_3:60392529-60392548 None:intergenic 45.0%
AAGGAGAACAAGTGCAGAAG+AGG - chr8_3:60392531-60392550 Msa1299290:intron 45.0%
CGGTGGGATTTAATTGAGGA+TGG + chr8_3:60392847-60392866 None:intergenic 45.0%
TCCTCAATTAAATCCCACCG+GGG - chr8_3:60392847-60392866 Msa1299290:intron 45.0%
ATAGGCGAATGATACATGGG+AGG + chr8_3:60392890-60392909 None:intergenic 45.0%
CCCATGTATCATTCGCCTAT+AGG - chr8_3:60392890-60392909 Msa1299290:intron 45.0%
! CAGTTTTCATGCTGAACTGC+AGG - chr8_3:60392995-60393014 Msa1299290:intron 45.0%
! CTTGACGAAGCACCAAACAA+GGG + chr8_3:60393031-60393050 None:intergenic 45.0%
! ACTTGACGAAGCACCAAACA+AGG + chr8_3:60393032-60393051 None:intergenic 45.0%
! AAGTACTGCTGCATCATCCT+CGG - chr8_3:60393048-60393067 Msa1299290:intron 45.0%
!!! TGAGACTGTTTTAGAGGTGG+AGG + chr8_3:60393319-60393338 None:intergenic 45.0%
AATCTATCTTCCAAGGAGCC+TGG - chr8_3:60393397-60393416 Msa1299290:intron 45.0%
AAAATGACCCTAACCTGACC+AGG + chr8_3:60393418-60393437 None:intergenic 45.0%
ATGTAGGATGTGAGTATGGC+AGG - chr8_3:60393610-60393629 Msa1299290:intron 45.0%
TGTAGGATGTGAGTATGGCA+GGG - chr8_3:60393611-60393630 Msa1299290:intron 45.0%
TCAGGTATACCATATGCCAC+AGG - chr8_3:60393916-60393935 Msa1299290:intron 45.0%
GAAGCTGCACCTACATTTCA+GGG + chr8_3:60394104-60394123 None:intergenic 45.0%
!! TTTTGTGGCATACGACTTGG+TGG + chr8_3:60394141-60394160 None:intergenic 45.0%
GGTACACTCGGGATTAATGT+GGG + chr8_3:60394291-60394310 None:intergenic 45.0%
AGGTACACTCGGGATTAATG+TGG + chr8_3:60394292-60394311 None:intergenic 45.0%
GCAATACATCAGGTACACTC+GGG + chr8_3:60394302-60394321 None:intergenic 45.0%
GGCAATACATCAGGTACACT+CGG + chr8_3:60394303-60394322 None:intergenic 45.0%
ATTCCAGGAGGCAATACATC+AGG + chr8_3:60394312-60394331 None:intergenic 45.0%
AGTCCAATCACAGGTAAAGG+AGG + chr8_3:60394378-60394397 None:intergenic 45.0%
GGAAGTCCAATCACAGGTAA+AGG + chr8_3:60394381-60394400 None:intergenic 45.0%
TTACCTGTGATTGGACTTCC+TGG - chr8_3:60394381-60394400 Msa1299290:CDS 45.0%
ACATATGATGGTTTCGGAGC+AGG + chr8_3:60394558-60394577 None:intergenic 45.0%
CACTCCAGAACTCACATCTA+TGG - chr8_3:60394623-60394642 Msa1299290:intron 45.0%
GCTTATATCTCCATGGCAGT+CGG - chr8_3:60394981-60395000 Msa1299290:intron 45.0%
! ATTGTTGCTTGTGCATGGAG+GGG + chr8_3:60395027-60395046 None:intergenic 45.0%
! GTATTGTTGCTTGTGCATGG+AGG + chr8_3:60395029-60395048 None:intergenic 45.0%
! ACGGTATTGTTGCTTGTGCA+TGG + chr8_3:60395032-60395051 None:intergenic 45.0%
AGTTCCCCATGTCTAATGCA+CGG - chr8_3:60395127-60395146 Msa1299290:intron 45.0%
TTCACCCGTGCATTAGACAT+GGG + chr8_3:60395135-60395154 None:intergenic 45.0%
CAGTGTCAGTGTCAACATCT+AGG - chr8_3:60395587-60395606 Msa1299290:intron 45.0%
TTAGAGGACATGAAAGCCCT+TGG - chr8_3:60395712-60395731 Msa1299290:five_prime_UTR 45.0%
!!! ATTTTTTTTTTTAATTCAAA+AGG - chr8_3:60393556-60393575 Msa1299290:intron 5.0%
GAAGACCACTAAAGGCGGTA+AGG - chr8_3:60389303-60389322 Msa1299290:CDS 50.0%
CATCACCTTACCGCCTTTAG+TGG + chr8_3:60389311-60389330 None:intergenic 50.0%
CCCTACCGATGCTTATCGAA+AGG - chr8_3:60389333-60389352 Msa1299290:CDS 50.0%
GAAAGAAGGTGAGGGATGTG+GGG - chr8_3:60389599-60389618 Msa1299290:intron 50.0%
CTGTTCTGTCACATCAGCCT+AGG + chr8_3:60389894-60389913 None:intergenic 50.0%
AGGCTGATGTGACAGAACAG+TGG - chr8_3:60389894-60389913 Msa1299290:intron 50.0%
!! GGAGTGTTAAGCTGGTTTGG+CGG + chr8_3:60390013-60390032 None:intergenic 50.0%
GGAATACTGGGGTAGGGATT+AGG + chr8_3:60390340-60390359 None:intergenic 50.0%
CAACAACAAACAGTGCGCAG+TGG + chr8_3:60390496-60390515 None:intergenic 50.0%
!! CGCACTGTTTGTTGTTGCAG+AGG - chr8_3:60390499-60390518 Msa1299290:CDS 50.0%
GGGCTTATATATAGGGACGG+AGG - chr8_3:60391328-60391347 Msa1299290:intron 50.0%
TTATCAGTGCTGTCAGGCCA+TGG - chr8_3:60391530-60391549 Msa1299290:intron 50.0%
CGTAAATGGGCCATAGCAGT+AGG + chr8_3:60391581-60391600 None:intergenic 50.0%
GTCCCTTCAGCTACTGTTAG+TGG + chr8_3:60391949-60391968 None:intergenic 50.0%
CAGTAGCTGAAGGGACGTAT+TGG - chr8_3:60391953-60391972 Msa1299290:intron 50.0%
! GTCATTTGGGGCTTCCACAA+AGG - chr8_3:60392512-60392531 Msa1299290:intron 50.0%
AGTTAATCACCCACAGCCAG+AGG - chr8_3:60392561-60392580 Msa1299290:CDS 50.0%
TGATACATGGGAGGTTTCCC+TGG + chr8_3:60392881-60392900 None:intergenic 50.0%
! GAACTAGCTTCAGGTAGTGG+TGG + chr8_3:60393124-60393143 None:intergenic 50.0%
! GCTGAACTAGCTTCAGGTAG+TGG + chr8_3:60393127-60393146 None:intergenic 50.0%
! CCATCAGCTGAACTAGCTTC+AGG + chr8_3:60393133-60393152 None:intergenic 50.0%
CCTGAAGCTAGTTCAGCTGA+TGG - chr8_3:60393130-60393149 Msa1299290:intron 50.0%
! GTAGTGGGATTTGGAGGCAT+GGG + chr8_3:60393196-60393215 None:intergenic 50.0%
! AGTAGTGGGATTTGGAGGCA+TGG + chr8_3:60393197-60393216 None:intergenic 50.0%
! ACAGCTTGCTCTTTAGGTGG+AGG + chr8_3:60393271-60393290 None:intergenic 50.0%
!!! TGTTTTAGAGGTGGAGGAGG+AGG + chr8_3:60393313-60393332 None:intergenic 50.0%
!!! GACTGTTTTAGAGGTGGAGG+AGG + chr8_3:60393316-60393335 None:intergenic 50.0%
!!! GGCTGAGACTGTTTTAGAGG+TGG + chr8_3:60393322-60393341 None:intergenic 50.0%
!! GGTGGCTGAGACTGTTTTAG+AGG + chr8_3:60393325-60393344 None:intergenic 50.0%
!! AGAAGCATCGGTGCTGTTGT+CGG - chr8_3:60393526-60393545 Msa1299290:intron 50.0%
GGTGTTCCCATTTGGGCATT+TGG + chr8_3:60393993-60394012 None:intergenic 50.0%
GGAAGCTGCACCTACATTTC+AGG + chr8_3:60394105-60394124 None:intergenic 50.0%
! GAGGCCCAGGAACCAATTTT+TGG + chr8_3:60394236-60394255 None:intergenic 50.0%
GTACCTGATGTATTGCCTCC+TGG - chr8_3:60394306-60394325 Msa1299290:intron 50.0%
AAAGGAGGCCTCATATCAGG+TGG + chr8_3:60394363-60394382 None:intergenic 50.0%
GGTAAAGGAGGCCTCATATC+AGG + chr8_3:60394366-60394385 None:intergenic 50.0%
AGGCCTCCTTTACCTGTGAT+TGG - chr8_3:60394372-60394391 Msa1299290:intron 50.0%
TGACCAGGAAGTCCAATCAC+AGG + chr8_3:60394387-60394406 None:intergenic 50.0%
TGTGATTGGACTTCCTGGTC+AGG - chr8_3:60394386-60394405 Msa1299290:CDS 50.0%
ATTAGGGGGACCATCATTCC+AGG + chr8_3:60394420-60394439 None:intergenic 50.0%
ATATGGGGGCCTTGGGATTA+GGG + chr8_3:60394436-60394455 None:intergenic 50.0%
AGTGGTGGTCTCATCATTGG+AGG + chr8_3:60394477-60394496 None:intergenic 50.0%
GGAAGTGGTGGTCTCATCAT+TGG + chr8_3:60394480-60394499 None:intergenic 50.0%
TCTTCCTGAAAGTTCGGAGG+AGG + chr8_3:60394510-60394529 None:intergenic 50.0%
TCCTCCGAACTTTCAGGAAG+AGG - chr8_3:60394509-60394528 Msa1299290:intron 50.0%
TCCTCTTCCTGAAAGTTCGG+AGG + chr8_3:60394513-60394532 None:intergenic 50.0%
! TCTGGAGTGTGCTGAGCTAA+TGG + chr8_3:60394612-60394631 None:intergenic 50.0%
GTTCCCCATGTCTAATGCAC+GGG - chr8_3:60395128-60395147 Msa1299290:intron 50.0%
TCACCCGTGCATTAGACATG+GGG + chr8_3:60395134-60395153 None:intergenic 50.0%
GTTCACCCGTGCATTAGACA+TGG + chr8_3:60395136-60395155 None:intergenic 50.0%
ACTAGGTTCCTGCATCTGTG+CGG - chr8_3:60395512-60395531 Msa1299290:intron 50.0%
TCAACCATCAAGTGCGCCAA+GGG + chr8_3:60395731-60395750 None:intergenic 50.0%
AGAGTGGCGAAGCAGCAAAA+TGG - chr8_3:60395750-60395769 Msa1299290:five_prime_UTR 50.0%
AGGGAGGGAGAGACACAAAG+TGG + chr8_3:60389987-60390006 None:intergenic 55.0%
!! CTGGTTTGGCGGTTTAGGGA+GGG + chr8_3:60390002-60390021 None:intergenic 55.0%
! GGTGTACCGGGCATTGCAAA+AGG - chr8_3:60390048-60390067 Msa1299290:intron 55.0%
GAAAAAGCGGGAGAAGGGTG+AGG - chr8_3:60392386-60392405 Msa1299290:intron 55.0%
GTGAGGCCCCTGTTATGTTC+AGG - chr8_3:60392403-60392422 Msa1299290:CDS 55.0%
GCCCCGGTGGGATTTAATTG+AGG + chr8_3:60392851-60392870 None:intergenic 55.0%
TACATGGGAGGTTTCCCTGG+CGG + chr8_3:60392878-60392897 None:intergenic 55.0%
ATCATCGGACTCTGTTGCCG+AGG + chr8_3:60393068-60393087 None:intergenic 55.0%
TCGGCAACAGAGTCCGATGA+TGG - chr8_3:60393067-60393086 Msa1299290:intron 55.0%
!! TTCAGGTAGTGGTGGTGGTG+GGG + chr8_3:60393116-60393135 None:intergenic 55.0%
!! CTTCAGGTAGTGGTGGTGGT+GGG + chr8_3:60393117-60393136 None:intergenic 55.0%
! CTAGCTTCAGGTAGTGGTGG+TGG + chr8_3:60393121-60393140 None:intergenic 55.0%
! ATTTGGAGGCATGGGAGGTG+GGG + chr8_3:60393188-60393207 None:intergenic 55.0%
! GATTTGGAGGCATGGGAGGT+GGG + chr8_3:60393189-60393208 None:intergenic 55.0%
GCCTCCAAATCCCACTACTG+CGG - chr8_3:60393198-60393217 Msa1299290:intron 55.0%
! ACCGCAGTAGTGGGATTTGG+AGG + chr8_3:60393202-60393221 None:intergenic 55.0%
! GGAGGTGGTGGTAATGATGC+AGG + chr8_3:60393226-60393245 None:intergenic 55.0%
TCTTTAGGTGGAGGACCAGG+AGG + chr8_3:60393262-60393281 None:intergenic 55.0%
TGCTCTTTAGGTGGAGGACC+AGG + chr8_3:60393265-60393284 None:intergenic 55.0%
TTAGAGGTGGAGGAGGAGGA+GGG + chr8_3:60393309-60393328 None:intergenic 55.0%
TTTAGAGGTGGAGGAGGAGG+AGG + chr8_3:60393310-60393329 None:intergenic 55.0%
TCTTCACCTTCACTGGTGCC+AGG + chr8_3:60393352-60393371 None:intergenic 55.0%
ATCTTCCAAGGAGCCTGGTC+AGG - chr8_3:60393402-60393421 Msa1299290:intron 55.0%
CAAGGAGCCTGGTCAGGTTA+GGG - chr8_3:60393408-60393427 Msa1299290:intron 55.0%
!! ATACGACTTGGTGGTGGAGG+GGG + chr8_3:60394132-60394151 None:intergenic 55.0%
!! CATACGACTTGGTGGTGGAG+GGG + chr8_3:60394133-60394152 None:intergenic 55.0%
!! GCATACGACTTGGTGGTGGA+GGG + chr8_3:60394134-60394153 None:intergenic 55.0%
!! TGTGGCATACGACTTGGTGG+TGG + chr8_3:60394138-60394157 None:intergenic 55.0%
AAGGCAACAGCTTCCTGGTC+CGG - chr8_3:60394263-60394282 Msa1299290:intron 55.0%
ATTAATGTGGGTCCCGGACC+AGG + chr8_3:60394279-60394298 None:intergenic 55.0%
CTCGGGATTAATGTGGGTCC+CGG + chr8_3:60394285-60394304 None:intergenic 55.0%
GGGAACCGAGATATTCCAGG+AGG + chr8_3:60394324-60394343 None:intergenic 55.0%
GGTGGGAACCGAGATATTCC+AGG + chr8_3:60394327-60394346 None:intergenic 55.0%
!! TCATATCAGGTGGTGGGGGT+GGG + chr8_3:60394353-60394372 None:intergenic 55.0%
AGGCCTCATATCAGGTGGTG+GGG + chr8_3:60394358-60394377 None:intergenic 55.0%
GAGGCCTCATATCAGGTGGT+GGG + chr8_3:60394359-60394378 None:intergenic 55.0%
TGATGGTCCCCCTAATCCCA+AGG - chr8_3:60394424-60394443 Msa1299290:CDS 55.0%
TATGGGGGCCTTGGGATTAG+GGG + chr8_3:60394435-60394454 None:intergenic 55.0%
CATATGGGGGCCTTGGGATT+AGG + chr8_3:60394437-60394456 None:intergenic 55.0%
CTAATCCCAAGGCCCCCATA+TGG - chr8_3:60394435-60394454 Msa1299290:CDS 55.0%
GGTGGTCTCATCATTGGAGG+AGG + chr8_3:60394474-60394493 None:intergenic 55.0%
ATGAGACCACCACTTCCACC+TGG - chr8_3:60394483-60394502 Msa1299290:intron 55.0%
TGAAAGTTCGGAGGAGGACC+AGG + chr8_3:60394504-60394523 None:intergenic 55.0%
TGGTCCTCCTCCGAACTTTC+AGG - chr8_3:60394503-60394522 Msa1299290:intron 55.0%
GATGGTTTCGGAGCAGGAAG+TGG + chr8_3:60394552-60394571 None:intergenic 55.0%
GGAGAGCAGTAGCACTCTGT+AGG - chr8_3:60394957-60394976 Msa1299290:intron 55.0%
AGATGTGACTCCGACTGCCA+TGG + chr8_3:60394994-60395013 None:intergenic 55.0%
CTAGGTTCCTGCATCTGTGC+GGG - chr8_3:60395513-60395532 Msa1299290:intron 55.0%
TGCATCTGTGCGGGTGAGAA+GGG - chr8_3:60395522-60395541 Msa1299290:intron 55.0%
AGGACAGTCTCTGTGACACC+TGG - chr8_3:60395607-60395626 Msa1299290:CDS 55.0%
GGACAGTCTCTGTGACACCT+GGG - chr8_3:60395608-60395627 Msa1299290:CDS 55.0%
AAAGCCCTTGGCGCACTTGA+TGG - chr8_3:60395724-60395743 Msa1299290:five_prime_UTR 55.0%
CTCAACCATCAAGTGCGCCA+AGG + chr8_3:60395732-60395751 None:intergenic 55.0%
! GCGCACTTGATGGTTGAGAG+TGG - chr8_3:60395734-60395753 Msa1299290:five_prime_UTR 55.0%
!! GCTGGTTTGGCGGTTTAGGG+AGG + chr8_3:60390003-60390022 None:intergenic 60.0%
TCAGTGCTGTCAGGCCATGG+TGG - chr8_3:60391533-60391552 Msa1299290:intron 60.0%
! TGCTGTCAGGCCATGGTGGA+TGG - chr8_3:60391537-60391556 Msa1299290:intron 60.0%
!! TGTCAGGCCATGGTGGATGG+CGG - chr8_3:60391540-60391559 Msa1299290:intron 60.0%
!! TCAGGTAGTGGTGGTGGTGG+GGG + chr8_3:60393115-60393134 None:intergenic 60.0%
!! GCTTCAGGTAGTGGTGGTGG+TGG + chr8_3:60393118-60393137 None:intergenic 60.0%
GGAGGCAGTGGCAAAGATGC+AGG + chr8_3:60393166-60393185 None:intergenic 60.0%
! TTTGGAGGCATGGGAGGTGG+GGG + chr8_3:60393187-60393206 None:intergenic 60.0%
! GGATTTGGAGGCATGGGAGG+TGG + chr8_3:60393190-60393209 None:intergenic 60.0%
! GTGGGATTTGGAGGCATGGG+AGG + chr8_3:60393193-60393212 None:intergenic 60.0%
! GGCACCGCAGTAGTGGGATT+TGG + chr8_3:60393205-60393224 None:intergenic 60.0%
! GATGCAGGCACCGCAGTAGT+GGG + chr8_3:60393211-60393230 None:intergenic 60.0%
! TGATGCAGGCACCGCAGTAG+TGG + chr8_3:60393212-60393231 None:intergenic 60.0%
TTAGGTGGAGGACCAGGAGG+TGG + chr8_3:60393259-60393278 None:intergenic 60.0%
TAGAGGTGGAGGAGGAGGAG+GGG + chr8_3:60393308-60393327 None:intergenic 60.0%
! TCACCTTCACTGGTGCCAGG+TGG + chr8_3:60393349-60393368 None:intergenic 60.0%
CCTAACCTGACCAGGCTCCT+TGG + chr8_3:60393410-60393429 None:intergenic 60.0%
CCAAGGAGCCTGGTCAGGTT+AGG - chr8_3:60393407-60393426 Msa1299290:intron 60.0%
!! GGCATACGACTTGGTGGTGG+AGG + chr8_3:60394135-60394154 None:intergenic 60.0%
AGCTGTTGCCTTGGAGGAGG+AGG + chr8_3:60394255-60394274 None:intergenic 60.0%
GGAAGCTGTTGCCTTGGAGG+AGG + chr8_3:60394258-60394277 None:intergenic 60.0%
CCAGGAAGCTGTTGCCTTGG+AGG + chr8_3:60394261-60394280 None:intergenic 60.0%
CCTCCAAGGCAACAGCTTCC+TGG - chr8_3:60394258-60394277 Msa1299290:intron 60.0%
GGACCAGGAAGCTGTTGCCT+TGG + chr8_3:60394264-60394283 None:intergenic 60.0%
AGGCAACAGCTTCCTGGTCC+GGG - chr8_3:60394264-60394283 Msa1299290:intron 60.0%
!! ATATCAGGTGGTGGGGGTGG+GGG + chr8_3:60394351-60394370 None:intergenic 60.0%
!! CATATCAGGTGGTGGGGGTG+GGG + chr8_3:60394352-60394371 None:intergenic 60.0%
!! CTCATATCAGGTGGTGGGGG+TGG + chr8_3:60394354-60394373 None:intergenic 60.0%
CACCCCCACCACCTGATATG+AGG - chr8_3:60394352-60394371 Msa1299290:intron 60.0%
! GGCCTCATATCAGGTGGTGG+GGG + chr8_3:60394357-60394376 None:intergenic 60.0%
GGAGGCCTCATATCAGGTGG+TGG + chr8_3:60394360-60394379 None:intergenic 60.0%
GGCACCACCTCCTGGAATGA+TGG - chr8_3:60394407-60394426 Msa1299290:CDS 60.0%
GGGACCATCATTCCAGGAGG+TGG + chr8_3:60394414-60394433 None:intergenic 60.0%
AGGGGGACCATCATTCCAGG+AGG + chr8_3:60394417-60394436 None:intergenic 60.0%
ATGGGGGCCTTGGGATTAGG+GGG + chr8_3:60394434-60394453 None:intergenic 60.0%
GAGGACCATATGGGGGCCTT+GGG + chr8_3:60394443-60394462 None:intergenic 60.0%
CCAGGTGGAGGACCATATGG+GGG + chr8_3:60394450-60394469 None:intergenic 60.0%
CCCAGGTGGAGGACCATATG+GGG + chr8_3:60394451-60394470 None:intergenic 60.0%
CCCCATATGGTCCTCCACCT+GGG - chr8_3:60394448-60394467 Msa1299290:intron 60.0%
GCCCAGGTGGAGGACCATAT+GGG + chr8_3:60394452-60394471 None:intergenic 60.0%
ATCATTGGAGGAGGCCCAGG+TGG + chr8_3:60394465-60394484 None:intergenic 60.0%
CTCATCATTGGAGGAGGCCC+AGG + chr8_3:60394468-60394487 None:intergenic 60.0%
AAGTTCGGAGGAGGACCAGG+TGG + chr8_3:60394501-60394520 None:intergenic 60.0%
CTTCTCACCCGCACAGATGC+AGG + chr8_3:60395523-60395542 None:intergenic 60.0%
CTGCATCTGTGCGGGTGAGA+AGG - chr8_3:60395521-60395540 Msa1299290:intron 60.0%
! TGCAGAGGCTGATGGCGCCT+TGG - chr8_3:60390514-60390533 Msa1299290:CDS 65.0%
TCCACCACCGCCATCCACCA+TGG + chr8_3:60391550-60391569 None:intergenic 65.0%
ATGGGAGGTTTCCCTGGCGG+TGG + chr8_3:60392875-60392894 None:intergenic 65.0%
GGAGGAGGAGGAGGGGGTAA+AGG + chr8_3:60393301-60393320 None:intergenic 65.0%
AGAGGTGGAGGAGGAGGAGG+GGG + chr8_3:60393307-60393326 None:intergenic 65.0%
CAGTCTCAGCCACCTCCACC+TGG - chr8_3:60393331-60393350 Msa1299290:intron 65.0%
! TCACTGGTGCCAGGTGGAGG+TGG + chr8_3:60393343-60393362 None:intergenic 65.0%
! CCTTCACTGGTGCCAGGTGG+AGG + chr8_3:60393346-60393365 None:intergenic 65.0%
CCTCCACCTGGCACCAGTGA+AGG - chr8_3:60393343-60393362 Msa1299290:intron 65.0%
TTCCTGGGCCTCCTCCTCCA+AGG - chr8_3:60394244-60394263 Msa1299290:intron 65.0%
GGAGGACCATATGGGGGCCT+TGG + chr8_3:60394444-60394463 None:intergenic 65.0%
CCCCCATATGGTCCTCCACC+TGG - chr8_3:60394447-60394466 Msa1299290:CDS 65.0%
GGCCCAGGTGGAGGACCATA+TGG + chr8_3:60394453-60394472 None:intergenic 65.0%
ATTGGAGGAGGCCCAGGTGG+AGG + chr8_3:60394462-60394481 None:intergenic 65.0%
GGAGGACCAGGTGGAAGTGG+TGG + chr8_3:60394492-60394511 None:intergenic 65.0%
GGAGGAGGACCAGGTGGAAG+TGG + chr8_3:60394495-60394514 None:intergenic 65.0%
!! CAGGCCATGGTGGATGGCGG+TGG - chr8_3:60391543-60391562 Msa1299290:intron 70.0%
!! GCCATGGTGGATGGCGGTGG+TGG - chr8_3:60391546-60391565 Msa1299290:intron 70.0%
TTTCCCTGGCGGTGGAGCCC+CGG + chr8_3:60392867-60392886 None:intergenic 70.0%
!! AGTGGTGGTGGTGGGGGAGG+TGG + chr8_3:60393109-60393128 None:intergenic 70.0%
!! GGTAGTGGTGGTGGTGGGGG+AGG + chr8_3:60393112-60393131 None:intergenic 70.0%
ATGGGAGGTGGGGGAGGCAG+TGG + chr8_3:60393178-60393197 None:intergenic 70.0%
! GGTGGCGGCAAAGGAGGTGG+TGG + chr8_3:60393238-60393257 None:intergenic 70.0%
!! GGTGGTGGCGGCAAAGGAGG+TGG + chr8_3:60393241-60393260 None:intergenic 70.0%
!! GGAGGTGGTGGCGGCAAAGG+AGG + chr8_3:60393244-60393263 None:intergenic 70.0%
!! CCAGGAGGTGGTGGCGGCAA+AGG + chr8_3:60393247-60393266 None:intergenic 70.0%
CCTTTGCCGCCACCACCTCC+TGG - chr8_3:60393244-60393263 Msa1299290:intron 70.0%
! GGAGGACCAGGAGGTGGTGG+CGG + chr8_3:60393253-60393272 None:intergenic 70.0%
GGTGGAGGACCAGGAGGTGG+TGG + chr8_3:60393256-60393275 None:intergenic 70.0%
!! CGACTTGGTGGTGGAGGGGG+CGG + chr8_3:60394129-60394148 None:intergenic 70.0%
TGCCTTGGAGGAGGAGGCCC+AGG + chr8_3:60394249-60394268 None:intergenic 70.0%
CCAGGAGGTGGTGCCTGACC+AGG + chr8_3:60394402-60394421 None:intergenic 70.0%
CCTGGTCAGGCACCACCTCC+TGG - chr8_3:60394399-60394418 Msa1299290:CDS 70.0%
!! GGTGGTGGTGGGGGAGGTGG+AGG + chr8_3:60393106-60393125 None:intergenic 75.0%
! GGAGGCATGGGAGGTGGGGG+AGG + chr8_3:60393184-60393203 None:intergenic 75.0%
!! CTTGGTGGTGGAGGGGGCGG+AGG + chr8_3:60394126-60394145 None:intergenic 75.0%
! GTGGTGGGGGTGGGGGTGGT+GGG + chr8_3:60394344-60394363 None:intergenic 75.0%
!! TCAGGTGGTGGGGGTGGGGG+TGG + chr8_3:60394348-60394367 None:intergenic 75.0%
! CCTGGCGGTGGAGCCCCGGT+GGG + chr8_3:60392863-60392882 None:intergenic 80.0%
! CCACCGGGGCTCCACCGCCA+GGG - chr8_3:60392861-60392880 Msa1299290:intron 80.0%
!!! GGTGGTGGGGGTGGGGGTGG+TGG + chr8_3:60394345-60394364 None:intergenic 80.0%
! CCCACCGGGGCTCCACCGCC+AGG - chr8_3:60392860-60392879 Msa1299290:intron 85.0%
! CCCTGGCGGTGGAGCCCCGG+TGG + chr8_3:60392864-60392883 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 60389023 60395962 60389023 ID=Msa1299290;Name=Msa1299290
chr8_3 mRNA 60389023 60395962 60389023 ID=Msa1299290-mRNA-1;Parent=Msa1299290;Name=Msa1299290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=275|1|1|1|0.88|0.8|10|155|545
chr8_3 exon 60389023 60389089 60389023 ID=Msa1299290-mRNA-1:exon:17661;Parent=Msa1299290-mRNA-1
chr8_3 exon 60389147 60389468 60389147 ID=Msa1299290-mRNA-1:exon:17660;Parent=Msa1299290-mRNA-1
chr8_3 exon 60390341 60390871 60390341 ID=Msa1299290-mRNA-1:exon:17659;Parent=Msa1299290-mRNA-1
chr8_3 exon 60391562 60391968 60391562 ID=Msa1299290-mRNA-1:exon:17658;Parent=Msa1299290-mRNA-1
chr8_3 exon 60392074 60392155 60392074 ID=Msa1299290-mRNA-1:exon:17657;Parent=Msa1299290-mRNA-1
chr8_3 exon 60392403 60392472 60392403 ID=Msa1299290-mRNA-1:exon:17656;Parent=Msa1299290-mRNA-1
chr8_3 exon 60392561 60392610 60392561 ID=Msa1299290-mRNA-1:exon:17655;Parent=Msa1299290-mRNA-1
chr8_3 exon 60394381 60394466 60394381 ID=Msa1299290-mRNA-1:exon:17654;Parent=Msa1299290-mRNA-1
chr8_3 exon 60395306 60395399 60395306 ID=Msa1299290-mRNA-1:exon:17653;Parent=Msa1299290-mRNA-1
chr8_3 exon 60395604 60395962 60395604 ID=Msa1299290-mRNA-1:exon:17652;Parent=Msa1299290-mRNA-1
chr8_3 five_prime_UTR 60395688 60395962 60395688 ID=Msa1299290-mRNA-1:five_prime_utr;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60395604 60395687 60395604 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60395306 60395399 60395306 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60394381 60394466 60394381 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60392561 60392610 60392561 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60392403 60392472 60392403 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60392074 60392155 60392074 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60391562 60391968 60391562 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60390341 60390871 60390341 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 CDS 60389235 60389468 60389235 ID=Msa1299290-mRNA-1:cds;Parent=Msa1299290-mRNA-1
chr8_3 three_prime_UTR 60389147 60389234 60389147 ID=Msa1299290-mRNA-1:three_prime_utr;Parent=Msa1299290-mRNA-1
chr8_3 three_prime_UTR 60389023 60389089 60389023 ID=Msa1299290-mRNA-1:three_prime_utr;Parent=Msa1299290-mRNA-1
Gene Sequence

>Msa1299290

ATGACGAAGACCACTAAAGGCGGTAAGGTGATGAACCCTACCGATGCTTATCGAAAGGAGCTTCGCAAAAAGGAATTGAAAAGGAATAAAAAAGAAAGAAAGAAGGTGAGGGATGTGGGGATTTTGAAGAAAGATCCTGATCAACTCAAGAAGCAGATTGAGAATTTGGAAATGATGAAGGCTGATGGCGCCTTGGATAAAGCAAGAAAGCACAAAAAGAGGCAACTAGAAGATACACTTAATCGTGTCATTAAGAAGCAGAAGGAATATGATGAGAAAAAGCGGGAGAAGGGTGAGGCCCCTGTTATGTTCAGTCATTTGGGGCTTCCACAAAGGAGAACAAGTGCAGAAGAGGAAGATAGAGTTAATCACCCACAGCCAGAGGACTCTGTTTATTACCATCCTCAATTAAATCCCACCGGGGCTCCACCGCCAGGGAAACCTCCCATGTATCATTCGCCTATAGGACCTAGAATTCCCTTGTTTGGTGCTTCGTCAAGTACTGCTGCATCATCCTCGGCAACAGAGTCCGATGATGGTGTATTAGCTGTACCTCCACCTCCCCCACCACCACCACTACCTGAAGCTAGTTCAGCTGATGGTGCTGTTTTACCTGCATCTTTGCCACTGCCTCCCCCACCTCCCATGCCTCCAAATCCCACTACTGCGGTGCCTGCATCATTACCACCACCTCCTTTGCCGCCACCACCTCCTGGTCCTCCACCTAAAGAGCAAGCTGTAAATCGGCCTTTACCCCCTCCTCCTCCTCCACCTCTAAAACAGTCTCAGCCACCTCCACCTGGCACCAGTGAAGGTGAAGAGAGAAATCAGAATGCATTGCCAGATAATCTATCTTCCAAGGAGCCTGGTCAGGTGCAGCTTCCTCCGCCCCCTCCACCACCAAGTCGTATGCCACAAAATTCTGGTGCTATTCAGTTTGATGGTGCTGTAGTTTCTACTGACAATAAGCATTCTTTGTCAAACCAGGAGATCCAAAAATTGGTTCCTGGGCCTCCTCCTCCAAGGCAACAGCTTCCTGGTCCGGGACCCACATTAATCCCGAGTGTACCTGATGTATTGCCTCCTGGAATATCTCGGTTCCCACCACCCCCACCCCCACCACCTGATATGAGGCCTCCTTTACCTGTGATTGGACTTCCTGGTCAGGCACCACCTCCTGGAATGATGGTCCCCCTAATCCCAAGGCCCCCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCACCACTTCCACCTGGTCCTCCTCCGAACTTTCAGGAAGAGGATCATATGGCAACTAGGCCACTTCCTGCTCCGAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACATCTATGGTTCCTGCATCTGTGCGGGTGAGAAGGGAGACTGCAATGACCAAAACAAAACCAAAACCATCTGTATCAACAGTGTCAGTGTCAACATCTAGGACAGTCTCTGTGACACCTGGGCCAACTATTTTAAAAGCAGAGTCAGTGAGCTCGTCGTCTGCTCCAAAAGCACCAAGCATTGATGACTCATACACAGCTTTCTTAGAGGACATGAAAGCCCTTGGCGCACTTGATGGTTGA
Protein sequence

>Msa1299290

MTKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVRDVGILKKDPDQLKKQIENLEMMKADGALDKARKHKKRQLEDTLNRVIKKQKEYDEKKREKGEAPVMFSHLGLPQRRTSAEEEDRVNHPQPEDSVYYHPQLNPTGAPPPGKPPMYHSPIGPRIPLFGASSSTAASSSATESDDGVLAVPPPPPPPPLPEASSADGAVLPASLPLPPPPPMPPNPTTAVPASLPPPPLPPPPPGPPPKEQAVNRPLPPPPPPPLKQSQPPPPGTSEGEERNQNALPDNLSSKEPGQVQLPPPPPPPSRMPQNSGAIQFDGAVVSTDNKHSLSNQEIQKLVPGPPPPRQQLPGPGPTLIPSVPDVLPPGISRFPPPPPPPPDMRPPLPVIGLPGQAPPPGMMVPLIPRPPYGPPPGPPPMMRPPLPPGPPPNFQEEDHMATRPLPAPKPSYVKSAASTVVKRPLAQHTPELTSMVPASVRVRRETAMTKTKPKPSVSTVSVSTSRTVSVTPGPTILKAESVSSSSAPKAPSIDDSYTAFLEDMKALGALDG*