Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130220 | XP_003626542.2 | 82.166 | 157 | 21 | 3 | 13 | 165 | 11 | 164 | 3.23e-82 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130220 | sp|Q6H805|ORR24_ORYSJ | 42.667 | 150 | 54 | 4 | 165 | 300 | 176 | 307 | 2.71e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130220 | G7L410 | 82.166 | 157 | 21 | 3 | 13 | 165 | 11 | 164 | 1.54e-82 | 255 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1130220 | TF | GARP-G2-like |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000500 | Msa1130220 | 0.930397 | 1.737502e-93 | -8.615850e-47 |
| Msa0005690 | Msa1130220 | 0.815198 | 1.045367e-51 | -8.615850e-47 |
| Msa0030400 | Msa1130220 | 0.817784 | 2.755012e-52 | -8.615850e-47 |
| Msa0032040 | Msa1130220 | 0.802701 | 4.951432e-49 | -8.615850e-47 |
| Msa0072710 | Msa1130220 | 0.832877 | 7.357470e-56 | -8.615850e-47 |
| Msa0091340 | Msa1130220 | 0.862686 | 4.250610e-64 | -8.615850e-47 |
| Msa0096510 | Msa1130220 | 0.810838 | 9.447927e-51 | -8.615850e-47 |
| Msa0116260 | Msa1130220 | 0.802273 | 6.067207e-49 | -8.615850e-47 |
| Msa0118250 | Msa1130220 | 0.806344 | 8.608214e-50 | -8.615850e-47 |
| Msa0607440 | Msa1130220 | 0.823828 | 1.122583e-53 | -8.615850e-47 |
| Msa0612730 | Msa1130220 | 0.812152 | 4.894989e-51 | -8.615850e-47 |
| Msa0618490 | Msa1130220 | 0.817175 | 3.779728e-52 | -8.615850e-47 |
| Msa0626890 | Msa1130220 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa0662670 | Msa1130220 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0665010 | Msa1130220 | 0.804879 | 1.747930e-49 | -8.615850e-47 |
| Msa0687320 | Msa1130220 | 0.810037 | 1.406345e-50 | -8.615850e-47 |
| Msa0688760 | Msa1130220 | 0.805674 | 1.190984e-49 | -8.615850e-47 |
| Msa0707270 | Msa1130220 | 0.804997 | 1.650907e-49 | -8.615850e-47 |
| Msa0708870 | Msa1130220 | 0.803536 | 3.326588e-49 | -8.615850e-47 |
| Msa0761930 | Msa1130220 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0791430 | Msa1130220 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0797010 | Msa1130220 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa0814780 | Msa1130220 | 0.817893 | 2.604171e-52 | -8.615850e-47 |
| Msa0829430 | Msa1130220 | 0.835689 | 1.449975e-56 | -8.615850e-47 |
| Msa0120980 | Msa1130220 | 0.817381 | 3.396036e-52 | -8.615850e-47 |
| Msa0121460 | Msa1130220 | 0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa0127060 | Msa1130220 | 0.812173 | 4.842631e-51 | -8.615850e-47 |
| Msa0173760 | Msa1130220 | 0.815920 | 7.218159e-52 | -8.615850e-47 |
| Msa0173850 | Msa1130220 | 0.806178 | 9.330035e-50 | -8.615850e-47 |
| Msa0376900 | Msa1130220 | 0.806346 | 8.601936e-50 | -8.615850e-47 |
| Msa0389890 | Msa1130220 | 0.804701 | 1.903772e-49 | -8.615850e-47 |
| Msa0390840 | Msa1130220 | 0.816842 | 4.488573e-52 | -8.615850e-47 |
| Msa0400900 | Msa1130220 | 0.836981 | 6.803737e-57 | -8.615850e-47 |
| Msa0423590 | Msa1130220 | 0.807448 | 5.030759e-50 | -8.615850e-47 |
| Msa0459920 | Msa1130220 | 0.815415 | 9.353602e-52 | -8.615850e-47 |
| Msa0467710 | Msa1130220 | 0.818036 | 2.416733e-52 | -8.615850e-47 |
| Msa0471080 | Msa1130220 | 0.825781 | 3.888112e-54 | -8.615850e-47 |
| Msa0471890 | Msa1130220 | 0.831099 | 2.022123e-55 | -8.615850e-47 |
| Msa0475740 | Msa1130220 | 0.822312 | 2.534534e-53 | -8.615850e-47 |
| Msa1015020 | Msa1130220 | 0.802936 | 4.427380e-49 | -8.615850e-47 |
| Msa1026880 | Msa1130220 | 0.804505 | 2.092219e-49 | -8.615850e-47 |
| Msa1028720 | Msa1130220 | 0.818803 | 1.619719e-52 | -8.615850e-47 |
| Msa1037690 | Msa1130220 | 0.900484 | 6.996090e-78 | -8.615850e-47 |
| Msa1039860 | Msa1130220 | 0.804075 | 2.570691e-49 | -8.615850e-47 |
| Msa1054890 | Msa1130220 | 0.804146 | 2.485287e-49 | -8.615850e-47 |
| Msa1056590 | Msa1130220 | 0.817378 | 3.401130e-52 | -8.615850e-47 |
| Msa1067710 | Msa1130220 | 0.827556 | 1.465382e-54 | -8.615850e-47 |
| Msa1081850 | Msa1130220 | 0.815742 | 7.908854e-52 | -8.615850e-47 |
| Msa1084210 | Msa1130220 | 0.808838 | 2.543476e-50 | -8.615850e-47 |
| Msa0269430 | Msa1130220 | 0.800948 | 1.134251e-48 | -8.615850e-47 |
| Msa0272420 | Msa1130220 | 0.828617 | 8.137635e-55 | -8.615850e-47 |
| Msa0312570 | Msa1130220 | 0.829297 | 5.568808e-55 | -8.615850e-47 |
| Msa0312780 | Msa1130220 | 0.825728 | 4.002153e-54 | -8.615850e-47 |
| Msa0315010 | Msa1130220 | 0.813528 | 2.445608e-51 | -8.615850e-47 |
| Msa0331830 | Msa1130220 | 0.802107 | 6.564394e-49 | -8.615850e-47 |
| Msa0358720 | Msa1130220 | 0.804281 | 2.329552e-49 | -8.615850e-47 |
| Msa1117830 | Msa1130220 | 0.813514 | 2.463489e-51 | -8.615850e-47 |
| Msa1128230 | Msa1130220 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa1130220 | Msa1151970 | 0.825934 | 3.574715e-54 | -8.615850e-47 |
| Msa1130220 | Msa1158650 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa1130220 | Msa1161520 | 0.807072 | 6.041693e-50 | -8.615850e-47 |
| Msa1130220 | Msa1182400 | 0.837424 | 5.240156e-57 | -8.615850e-47 |
| Msa1130220 | Msa1183730 | 0.813487 | 2.496839e-51 | -8.615850e-47 |
| Msa1130220 | Msa1230190 | 0.833447 | 5.305812e-56 | -8.615850e-47 |
| Msa1130220 | Msa1272770 | 0.807479 | 4.953386e-50 | -8.615850e-47 |
| Msa1130220 | Msa1286950 | 0.806777 | 6.977495e-50 | -8.615850e-47 |
| Msa1130220 | Msa1295220 | 0.805546 | 1.266991e-49 | -8.615850e-47 |
| Msa1130220 | Msa1296610 | 0.807112 | 5.927121e-50 | -8.615850e-47 |
| Msa1130220 | Msa1297720 | 0.806972 | 6.345844e-50 | -8.615850e-47 |
| Msa1130220 | Msa1316720 | 0.814939 | 1.193158e-51 | -8.615850e-47 |
| Msa1130220 | Msa1327690 | 0.804649 | 1.951610e-49 | -8.615850e-47 |
| Msa1130220 | Msa1334020 | 0.807604 | 4.661117e-50 | -8.615850e-47 |
| Msa1130220 | Msa1349490 | 0.821587 | 3.730763e-53 | -8.615850e-47 |
| Msa1130220 | Msa1350350 | 0.809944 | 1.472746e-50 | -8.615850e-47 |
| Msa1130220 | Msa1356680 | 0.813900 | 2.025575e-51 | -8.615850e-47 |
| Msa1130220 | Msa1365120 | 0.804912 | 1.720392e-49 | -8.615850e-47 |
| Msa1130220 | Msa1368800 | 0.809485 | 1.848286e-50 | -8.615850e-47 |
| Msa1130220 | Msa1378840 | 0.824647 | 7.206616e-54 | -8.615850e-47 |
| Msa1130220 | Msa1379360 | 0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa1130220 | Msa1384980 | 0.811778 | 5.905400e-51 | -8.615850e-47 |
| Msa1130220 | Msa1386020 | 0.828915 | 6.893873e-55 | -8.615850e-47 |
| Msa1130220 | Msa1391600 | 0.802197 | 6.289765e-49 | -8.615850e-47 |
| Msa1130220 | Msa1393550 | 0.806465 | 8.117484e-50 | -8.615850e-47 |
| Msa1130220 | Msa1395640 | 0.825962 | 3.521106e-54 | -8.615850e-47 |
| Msa1130220 | Msa1397110 | 0.821844 | 3.253710e-53 | -8.615850e-47 |
| Msa1130220 | Msa1403900 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa1130220 | Msa1408190 | 0.804838 | 1.782140e-49 | -8.615850e-47 |
| Msa1130220 | Msa1426310 | 0.804781 | 1.831620e-49 | -8.615850e-47 |
| Msa1130220 | Msa1431240 | 0.813353 | 2.672403e-51 | -8.615850e-47 |
| Msa1130220 | Msa1432250 | 0.832122 | 1.131861e-55 | -8.615850e-47 |
| Msa1130220 | Msa1432350 | 0.806086 | 9.757369e-50 | -8.615850e-47 |
| Msa1130220 | Msa1433380 | 0.800042 | 1.734766e-48 | -8.615850e-47 |
| Msa1130220 | Msa1438780 | 0.834186 | 3.466495e-56 | -8.615850e-47 |
| Msa1130220 | Msa1448990 | 0.806021 | 1.006961e-49 | -8.615850e-47 |
| Msa1130220 | Msa1450420 | 0.810671 | 1.026475e-50 | -8.615850e-47 |
| Msa1130220 | Msa1450850 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa1130220 | Msa1451780 | 0.823837 | 1.116870e-53 | -8.615850e-47 |
| Msa0484890 | Msa1130220 | 0.801438 | 9.003915e-49 | -8.615850e-47 |
| Msa0525800 | Msa1130220 | 0.807443 | 5.042552e-50 | -8.615850e-47 |
| Msa0533140 | Msa1130220 | 0.822607 | 2.164335e-53 | -8.615850e-47 |
| Msa0540160 | Msa1130220 | 0.818405 | 1.993969e-52 | -8.615850e-47 |
| Msa0540520 | Msa1130220 | 0.809953 | 1.466706e-50 | -8.615850e-47 |
| Msa0573970 | Msa1130220 | 0.806479 | 8.062097e-50 | -8.615850e-47 |
| Msa0587060 | Msa1130220 | 0.809604 | 1.742968e-50 | -8.615850e-47 |
| Msa0588600 | Msa1130220 | 0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0589540 | Msa1130220 | 0.841968 | 3.443496e-58 | -8.615850e-47 |
| Msa0846070 | Msa1130220 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa0853920 | Msa1130220 | 0.807206 | 5.660314e-50 | -8.615850e-47 |
| Msa0929400 | Msa1130220 | 0.807608 | 4.651386e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130220 | MtrunA17_Chr7g0275391 | 82.166 | 157 | 21 | 3 | 13 | 165 | 11 | 164 | 2.97e-86 | 255 |
| Msa1130220 | MtrunA17_Chr7g0275401 | 57.143 | 140 | 30 | 4 | 163 | 283 | 148 | 276 | 9.11e-40 | 140 |
| Msa1130220 | MtrunA17_Chr3g0137101 | 62.651 | 83 | 31 | 0 | 178 | 260 | 188 | 270 | 5.25e-27 | 110 |
| Msa1130220 | MtrunA17_Chr7g0275891 | 51.220 | 123 | 30 | 3 | 163 | 255 | 149 | 271 | 3.56e-26 | 105 |
| Msa1130220 | MtrunA17_Chr1g0149841 | 55.752 | 113 | 32 | 2 | 162 | 256 | 147 | 259 | 6.18e-26 | 107 |
| Msa1130220 | MtrunA17_Chr4g0050431 | 61.538 | 78 | 27 | 2 | 83 | 160 | 137 | 211 | 4.83e-23 | 99.4 |
| Msa1130220 | MtrunA17_Chr1g0161431 | 44.348 | 115 | 58 | 2 | 156 | 265 | 163 | 276 | 5.12e-22 | 96.3 |
| Msa1130220 | MtrunA17_Chr2g0304841 | 55.294 | 85 | 35 | 1 | 183 | 267 | 208 | 289 | 8.90e-22 | 95.5 |
| Msa1130220 | MtrunA17_Chr1g0149831 | 50.442 | 113 | 35 | 3 | 162 | 256 | 84 | 193 | 1.21e-21 | 91.3 |
| Msa1130220 | MtrunA17_Chr4g0009851 | 45.299 | 117 | 52 | 4 | 138 | 245 | 113 | 226 | 4.51e-21 | 91.3 |
| Msa1130220 | MtrunA17_Chr4g0074401 | 43.103 | 116 | 63 | 1 | 184 | 296 | 199 | 314 | 4.57e-20 | 90.5 |
| Msa1130220 | MtrunA17_Chr2g0294911 | 53.425 | 73 | 34 | 0 | 184 | 256 | 207 | 279 | 4.79e-19 | 87.4 |
| Msa1130220 | MtrunA17_Chr3g0134461 | 60.938 | 64 | 24 | 1 | 174 | 237 | 130 | 192 | 5.77e-19 | 83.2 |
| Msa1130220 | MtrunA17_Chr4g0067981 | 60.938 | 64 | 25 | 0 | 184 | 247 | 211 | 274 | 8.66e-19 | 86.7 |
| Msa1130220 | MtrunA17_Chr4g0009981 | 48.837 | 86 | 41 | 2 | 172 | 256 | 99 | 182 | 4.32e-18 | 82.0 |
| Msa1130220 | MtrunA17_Chr4g0074411 | 42.241 | 116 | 64 | 1 | 184 | 296 | 197 | 312 | 6.00e-18 | 84.0 |
| Msa1130220 | MtrunA17_Chr4g0009901 | 40.517 | 116 | 58 | 2 | 131 | 244 | 118 | 224 | 6.71e-18 | 82.0 |
| Msa1130220 | MtrunA17_Chr4g0074421 | 36.719 | 128 | 65 | 3 | 125 | 237 | 56 | 182 | 3.39e-17 | 78.2 |
| Msa1130220 | MtrunA17_Chr8g0376881 | 48.980 | 98 | 42 | 2 | 165 | 254 | 178 | 275 | 4.95e-17 | 81.3 |
| Msa1130220 | MtrunA17_Chr6g0471041 | 54.286 | 70 | 30 | 1 | 176 | 245 | 162 | 229 | 5.66e-16 | 77.8 |
| Msa1130220 | MtrunA17_Chr3g0123131 | 53.521 | 71 | 33 | 0 | 184 | 254 | 195 | 265 | 6.13e-16 | 78.2 |
| Msa1130220 | MtrunA17_Chr6g0473731 | 56.667 | 60 | 26 | 0 | 187 | 246 | 94 | 153 | 7.66e-16 | 77.4 |
| Msa1130220 | MtrunA17_Chr1g0149851 | 39.259 | 135 | 54 | 4 | 184 | 300 | 187 | 311 | 2.59e-15 | 76.3 |
| Msa1130220 | MtrunA17_Chr4g0009991 | 38.596 | 114 | 65 | 2 | 129 | 237 | 3 | 116 | 3.91e-15 | 70.9 |
| Msa1130220 | MtrunA17_Chr3g0134481 | 58.491 | 53 | 22 | 0 | 187 | 239 | 131 | 183 | 1.01e-14 | 71.2 |
| Msa1130220 | MtrunA17_Chr1g0190301 | 40.351 | 114 | 58 | 5 | 137 | 240 | 115 | 228 | 5.57e-14 | 71.6 |
| Msa1130220 | MtrunA17_Chr4g0031961 | 50.000 | 62 | 31 | 0 | 185 | 246 | 128 | 189 | 1.05e-13 | 70.5 |
| Msa1130220 | MtrunA17_Chr7g0274471 | 60.714 | 56 | 21 | 1 | 186 | 240 | 216 | 271 | 1.73e-13 | 70.5 |
| Msa1130220 | MtrunA17_Chr4g0040481 | 42.169 | 83 | 46 | 1 | 183 | 263 | 153 | 235 | 3.00e-13 | 69.7 |
| Msa1130220 | MtrunA17_Chr2g0324891 | 38.043 | 92 | 56 | 1 | 165 | 255 | 137 | 228 | 5.72e-13 | 68.9 |
| Msa1130220 | MtrunA17_Chr7g0255711 | 48.387 | 62 | 32 | 0 | 185 | 246 | 88 | 149 | 6.56e-13 | 67.8 |
| Msa1130220 | MtrunA17_Chr5g0400241 | 44.737 | 76 | 42 | 0 | 171 | 246 | 294 | 369 | 7.42e-13 | 68.9 |
| Msa1130220 | MtrunA17_Chr4g0054981 | 45.946 | 74 | 40 | 0 | 167 | 240 | 289 | 362 | 1.70e-12 | 67.8 |
| Msa1130220 | MtrunA17_Chr6g0469321 | 60.377 | 53 | 21 | 0 | 204 | 256 | 70 | 122 | 1.80e-12 | 64.7 |
| Msa1130220 | MtrunA17_Chr1g0198601 | 41.758 | 91 | 48 | 2 | 166 | 255 | 193 | 279 | 7.09e-12 | 65.5 |
| Msa1130220 | MtrunA17_Chr6g0461641 | 51.724 | 58 | 27 | 1 | 184 | 240 | 38 | 95 | 8.08e-12 | 65.5 |
| Msa1130220 | MtrunA17_Chr3g0136331 | 37.288 | 118 | 67 | 2 | 80 | 197 | 84 | 194 | 2.44e-11 | 64.3 |
| Msa1130220 | MtrunA17_Chr5g0417521 | 48.276 | 58 | 29 | 1 | 184 | 240 | 11 | 68 | 3.38e-11 | 63.2 |
| Msa1130220 | MtrunA17_Chr1g0175091 | 40.964 | 83 | 46 | 2 | 181 | 260 | 251 | 333 | 3.63e-11 | 63.5 |
| Msa1130220 | MtrunA17_Chr2g0321461 | 50.000 | 58 | 28 | 1 | 184 | 240 | 41 | 98 | 3.81e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130220 | AT4G31920.1 | 56.627 | 83 | 36 | 0 | 176 | 258 | 171 | 253 | 4.11e-23 | 99.8 |
| Msa1130220 | AT4G33520.4 | 51.685 | 89 | 40 | 1 | 73 | 161 | 140 | 225 | 9.32e-23 | 94.7 |
| Msa1130220 | AT4G33520.1 | 52.273 | 88 | 39 | 1 | 73 | 160 | 140 | 224 | 1.74e-22 | 94.0 |
| Msa1130220 | AT5G58080.1 | 41.259 | 143 | 58 | 3 | 144 | 262 | 126 | 266 | 1.82e-22 | 97.8 |
| Msa1130220 | AT4G33520.2 | 46.957 | 115 | 52 | 3 | 83 | 194 | 150 | 258 | 1.86e-21 | 95.1 |
| Msa1130220 | AT4G33520.3 | 46.957 | 115 | 52 | 3 | 83 | 194 | 150 | 258 | 1.87e-21 | 95.1 |
| Msa1130220 | AT3G16857.1 | 45.794 | 107 | 48 | 2 | 173 | 269 | 213 | 319 | 3.88e-20 | 91.3 |
| Msa1130220 | AT3G16857.2 | 45.794 | 107 | 48 | 2 | 173 | 269 | 213 | 319 | 4.62e-20 | 90.9 |
| Msa1130220 | AT3G16857.3 | 45.794 | 107 | 48 | 2 | 173 | 269 | 143 | 249 | 4.98e-20 | 90.9 |
| Msa1130220 | AT2G25180.1 | 50.000 | 100 | 39 | 1 | 169 | 257 | 165 | 264 | 2.67e-19 | 88.6 |
| Msa1130220 | AT2G01760.3 | 53.425 | 73 | 33 | 1 | 183 | 255 | 130 | 201 | 4.07e-17 | 80.9 |
| Msa1130220 | AT2G01760.1 | 53.425 | 73 | 33 | 1 | 183 | 255 | 195 | 266 | 4.56e-17 | 81.3 |
| Msa1130220 | AT2G01760.2 | 53.425 | 73 | 33 | 1 | 183 | 255 | 223 | 294 | 4.60e-17 | 81.3 |
| Msa1130220 | AT2G20570.1 | 31.638 | 177 | 96 | 4 | 94 | 256 | 56 | 221 | 5.43e-16 | 78.2 |
| Msa1130220 | AT5G44190.2 | 49.367 | 79 | 37 | 1 | 178 | 256 | 140 | 215 | 6.09e-16 | 77.8 |
| Msa1130220 | AT5G44190.1 | 49.367 | 79 | 37 | 1 | 178 | 256 | 140 | 215 | 6.69e-16 | 77.8 |
| Msa1130220 | AT1G67710.1 | 60.000 | 65 | 25 | 1 | 190 | 253 | 195 | 259 | 6.84e-15 | 75.5 |
| Msa1130220 | AT1G67710.2 | 60.000 | 65 | 25 | 1 | 190 | 253 | 130 | 194 | 7.29e-15 | 75.1 |
| Msa1130220 | AT1G67710.3 | 60.000 | 65 | 25 | 1 | 190 | 253 | 121 | 185 | 7.34e-15 | 75.1 |
| Msa1130220 | AT5G07210.1 | 46.067 | 89 | 39 | 2 | 167 | 247 | 202 | 289 | 8.78e-15 | 75.1 |
| Msa1130220 | AT5G07210.2 | 46.067 | 89 | 39 | 2 | 167 | 247 | 194 | 281 | 8.88e-15 | 75.1 |
| Msa1130220 | AT5G59570.2 | 51.613 | 62 | 30 | 0 | 185 | 246 | 138 | 199 | 1.07e-14 | 73.6 |
| Msa1130220 | AT5G59570.1 | 51.613 | 62 | 30 | 0 | 185 | 246 | 138 | 199 | 1.07e-14 | 73.6 |
| Msa1130220 | AT2G40970.1 | 48.387 | 62 | 32 | 0 | 185 | 246 | 102 | 163 | 1.27e-13 | 69.7 |
| Msa1130220 | AT3G46640.3 | 50.000 | 62 | 31 | 0 | 185 | 246 | 141 | 202 | 1.30e-13 | 70.5 |
| Msa1130220 | AT3G46640.2 | 50.000 | 62 | 31 | 0 | 185 | 246 | 141 | 202 | 1.39e-13 | 70.5 |
| Msa1130220 | AT3G46640.1 | 50.000 | 62 | 31 | 0 | 185 | 246 | 141 | 202 | 1.39e-13 | 70.5 |
| Msa1130220 | AT5G05090.1 | 47.761 | 67 | 34 | 1 | 181 | 246 | 73 | 139 | 4.79e-13 | 68.6 |
| Msa1130220 | AT3G10760.1 | 48.387 | 62 | 32 | 0 | 185 | 246 | 102 | 163 | 5.12e-13 | 68.9 |
| Msa1130220 | AT2G20570.2 | 29.474 | 190 | 99 | 4 | 94 | 256 | 56 | 237 | 6.04e-13 | 69.3 |
| Msa1130220 | AT2G27070.1 | 43.678 | 87 | 42 | 2 | 167 | 246 | 197 | 283 | 8.69e-13 | 68.9 |
| Msa1130220 | AT3G62670.1 | 38.462 | 104 | 59 | 2 | 169 | 267 | 192 | 295 | 1.60e-12 | 68.2 |
| Msa1130220 | AT4G18020.3 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 5.68e-12 | 66.6 |
| Msa1130220 | AT4G18020.2 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 5.68e-12 | 66.6 |
| Msa1130220 | AT4G18020.1 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 5.68e-12 | 66.6 |
| Msa1130220 | AT4G18020.6 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 5.68e-12 | 66.6 |
| Msa1130220 | AT4G18020.9 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 5.68e-12 | 66.6 |
| Msa1130220 | AT4G18020.8 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT4G18020.11 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT4G18020.4 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT4G18020.5 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT4G18020.10 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT4G18020.7 | 46.250 | 80 | 41 | 1 | 167 | 246 | 277 | 354 | 6.26e-12 | 66.2 |
| Msa1130220 | AT3G04030.1 | 43.750 | 80 | 39 | 2 | 184 | 262 | 41 | 115 | 7.80e-12 | 65.9 |
| Msa1130220 | AT1G69580.2 | 47.143 | 70 | 35 | 2 | 184 | 252 | 30 | 98 | 8.04e-12 | 65.5 |
| Msa1130220 | AT1G69580.1 | 47.143 | 70 | 35 | 2 | 184 | 252 | 30 | 98 | 8.08e-12 | 65.5 |
| Msa1130220 | AT3G04030.3 | 43.750 | 80 | 39 | 2 | 184 | 262 | 41 | 115 | 8.79e-12 | 65.5 |
| Msa1130220 | AT3G04450.1 | 31.429 | 140 | 89 | 4 | 128 | 260 | 172 | 311 | 4.65e-11 | 63.5 |
| Msa1130220 | AT3G04450.3 | 34.167 | 120 | 72 | 4 | 128 | 240 | 172 | 291 | 5.82e-11 | 62.8 |
| Msa1130220 | AT3G04450.4 | 31.429 | 140 | 89 | 4 | 128 | 260 | 132 | 271 | 7.22e-11 | 62.8 |
| Msa1130220 | AT3G04450.2 | 31.429 | 140 | 89 | 4 | 128 | 260 | 132 | 271 | 7.22e-11 | 62.8 |
Find 59 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCTCTGAATCTCAATTT+TGG | 0.195929 | 7_3:-82340491 | Msa1130220:CDS |
| AAATATTACCTCTAAGTCTA+AGG | 0.276760 | 7_3:+82339855 | None:intergenic |
| GCTAAAATAATAATAATAAT+TGG | 0.283834 | 7_3:-82340626 | Msa1130220:five_prime_UTR |
| ACTTCTACCCTTAGACTTAG+AGG | 0.293678 | 7_3:-82339863 | Msa1130220:intron |
| TGCGTCACAGCAGAATGATT+TGG | 0.295260 | 7_3:+82340527 | None:intergenic |
| AAGCTGAAAAGTATTAGTTT+TGG | 0.311673 | 7_3:-82332717 | Msa1130220:CDS |
| CGAGGCTTCTTCTGCGTTGT+TGG | 0.319233 | 7_3:+82333415 | None:intergenic |
| CTTGTCGCAGTTAATCAATT+TGG | 0.331705 | 7_3:-82333358 | Msa1130220:CDS |
| GCGTCACAGCAGAATGATTT+GGG | 0.352377 | 7_3:+82340528 | None:intergenic |
| AAGAGAAAACTGCAACAAAT+TGG | 0.354991 | 7_3:-82339937 | Msa1130220:CDS |
| GGCATTCTTTGAACATGGTT+CGG | 0.389834 | 7_3:+82332599 | None:intergenic |
| TGAGATGCTACAGAAGAAAT+TGG | 0.393613 | 7_3:+82332578 | None:intergenic |
| AAACTTGTGGTGTAAGTTAT+CGG | 0.420834 | 7_3:+82333381 | None:intergenic |
| GCTGTTGTTCTCCATGTTCG+TGG | 0.430325 | 7_3:-82340338 | Msa1130220:CDS |
| TGGTTCTGTTACATTTCAAC+CGG | 0.443329 | 7_3:-82332655 | Msa1130220:CDS |
| TCTTTGAACATGGTTCGGTT+TGG | 0.444140 | 7_3:+82332604 | None:intergenic |
| TGAGCTTCAGCAGCTGCTGT+TGG | 0.445681 | 7_3:+82340453 | None:intergenic |
| CAACCGGCTTACGTTTCAAC+CGG | 0.445810 | 7_3:-82332639 | Msa1130220:CDS |
| GTTCGGTTTGGCGCGAGCTA+TGG | 0.448022 | 7_3:+82332616 | None:intergenic |
| ATCATGGAGGTGGTCCCCAC+TGG | 0.448930 | 7_3:+82340373 | None:intergenic |
| AATATGGTGGCAAATTTAGT+TGG | 0.450247 | 7_3:-82332678 | Msa1130220:CDS |
| ACAAATTGGCAAAAGCAGTT+AGG | 0.468817 | 7_3:-82339923 | Msa1130220:CDS |
| TTCGGATGACAAAGGGGAAA+GGG | 0.488766 | 7_3:+82339958 | None:intergenic |
| AATAATAATAATAATTGGAC+AGG | 0.490202 | 7_3:-82340621 | Msa1130220:five_prime_UTR |
| CTGCCAAAATTGAGATTCAG+AGG | 0.501848 | 7_3:+82340488 | None:intergenic |
| ACAGTAGCAGATAACACTTC+TGG | 0.505949 | 7_3:+82340010 | None:intergenic |
| ATGGTGGCAAATTTAGTTGG+TGG | 0.514377 | 7_3:-82332675 | Msa1130220:CDS |
| GGTTTGGCGCGAGCTATGGC+CGG | 0.518966 | 7_3:+82332620 | None:intergenic |
| TAAAACCACATGTTGTTAAG+TGG | 0.519304 | 7_3:+82339885 | None:intergenic |
| ATTCTGATAAATCTAGAAAG+AGG | 0.520246 | 7_3:-82333456 | Msa1130220:CDS |
| ACATGTGGCCAGCCATCTCC+AGG | 0.523004 | 7_3:-82333009 | Msa1130220:intron |
| CACACATCATTCCACGAACA+TGG | 0.531138 | 7_3:+82340327 | None:intergenic |
| GTCCCCACTGGAAGTAGTTG+AGG | 0.533910 | 7_3:+82340385 | None:intergenic |
| GGTGAACCGTAGGGACCTAA+AGG | 0.535536 | 7_3:-82340710 | None:intergenic |
| TAATTGGACAGGAACAAGAT+TGG | 0.536467 | 7_3:-82340610 | Msa1130220:five_prime_UTR |
| AGAAGAAGCCTCGAGTTGCT+TGG | 0.543514 | 7_3:-82333405 | Msa1130220:CDS |
| AAGAGGAAGGATAAGAATGA+TGG | 0.547203 | 7_3:-82333439 | Msa1130220:CDS |
| CAGCAGAATCATCATCATCA+TGG | 0.554273 | 7_3:+82340357 | None:intergenic |
| CTTCGGATGACAAAGGGGAA+AGG | 0.559317 | 7_3:+82339957 | None:intergenic |
| GCACACCACTTAACAACATG+TGG | 0.559641 | 7_3:-82339890 | Msa1130220:CDS |
| AATATTACCTCTAAGTCTAA+GGG | 0.564175 | 7_3:+82339856 | None:intergenic |
| AAACGCGATGATGATATTGA+TGG | 0.574757 | 7_3:+82340429 | None:intergenic |
| TGATAAATCTAGAAAGAGGA+AGG | 0.586660 | 7_3:-82333452 | Msa1130220:CDS |
| AAATTGGCATTCTTTGAACA+TGG | 0.589855 | 7_3:+82332594 | None:intergenic |
| CAACCTCAACTACTTCCAGT+GGG | 0.602218 | 7_3:-82340388 | Msa1130220:CDS |
| TGGCCGGTTGAAACGTAAGC+CGG | 0.611007 | 7_3:+82332636 | None:intergenic |
| AATCATCATCATCATGGAGG+TGG | 0.613652 | 7_3:+82340363 | None:intergenic |
| TCAACCTCAACTACTTCCAG+TGG | 0.617567 | 7_3:-82340389 | Msa1130220:CDS |
| GAATGCTGAAAATCTTACAA+AGG | 0.625912 | 7_3:-82333033 | Msa1130220:CDS |
| AAATCTTACAAAGGAACATG+TGG | 0.626847 | 7_3:-82333024 | Msa1130220:CDS |
| ATCAAGTTAAGAATCTTCTG+TGG | 0.644023 | 7_3:+82333056 | None:intergenic |
| GAGGTTGAACAACACCGCAA+TGG | 0.646311 | 7_3:+82340404 | None:intergenic |
| TTTCTCTTCGGATGACAAAG+GGG | 0.661704 | 7_3:+82339952 | None:intergenic |
| TTATCGGACCAAGCAACTCG+AGG | 0.664697 | 7_3:+82333397 | None:intergenic |
| GTTCGTGGAATGATGTGTGA+GGG | 0.680994 | 7_3:-82340323 | Msa1130220:CDS |
| TGTTCGTGGAATGATGTGTG+AGG | 0.700135 | 7_3:-82340324 | Msa1130220:CDS |
| CAGAATCATCATCATCATGG+AGG | 0.719272 | 7_3:+82340360 | None:intergenic |
| AACCTCAACTACTTCCAGTG+GGG | 0.733472 | 7_3:-82340387 | Msa1130220:CDS |
| TAACTGCGACAAGAAACTTG+TGG | 0.789334 | 7_3:+82333368 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATAAAATAAAATATA+AGG | - | chr7_3:82337687-82337706 | Msa1130220:intron | 0.0% |
| !!! | TTTAAAAAAATTATTTTTTT+GGG | + | chr7_3:82337905-82337924 | None:intergenic | 0.0% |
| !!! | TAAAAATATTATATATTTTA+GGG | + | chr7_3:82338189-82338208 | None:intergenic | 0.0% |
| !!! | TTAAAAATATTATATATTTT+AGG | + | chr7_3:82338190-82338209 | None:intergenic | 0.0% |
| !!! | TAAAAATATTATATATTTTA+GGG | + | chr7_3:82338189-82338208 | None:intergenic | 0.0% |
| !!! | TTAAAAATATTATATATTTT+AGG | + | chr7_3:82338190-82338209 | None:intergenic | 0.0% |
| !!! | TAAAAATATTATATATTTTA+GGG | + | chr7_3:82338189-82338208 | None:intergenic | 0.0% |
| !!! | TTAAAAATATTATATATTTT+AGG | + | chr7_3:82338190-82338209 | None:intergenic | 0.0% |
| !! | TTTAAATAAAATAAAATATA+TGG | - | chr7_3:82337687-82337706 | Msa1130220:intron | 0.0% |
| !! | GCTAAAATAATAATAATAAT+TGG | - | chr7_3:82332621-82332640 | Msa1130220:CDS | 10.0% |
| !!! | TGTTTGTTATTAATAATTAA+TGG | - | chr7_3:82333210-82333229 | Msa1130220:intron | 10.0% |
| !! | AAATAAGTTATTTATCATTT+CGG | - | chr7_3:82336152-82336171 | Msa1130220:intron | 10.0% |
| !! | GCAAAAAAAAAAAAAAAAAA+AGG | - | chr7_3:82336995-82337014 | Msa1130220:intron | 10.0% |
| !!! | TAGTGATTAAAAATTTTATA+GGG | - | chr7_3:82338086-82338105 | Msa1130220:intron | 10.0% |
| !! | AATAATATATTATGAAAAGT+TGG | - | chr7_3:82338245-82338264 | Msa1130220:intron | 10.0% |
| !! | AATAATATATTATGAAAAGT+TGG | - | chr7_3:82338245-82338264 | Msa1130220:intron | 10.0% |
| !! | AAATAAGAAAATCAAATATA+TGG | - | chr7_3:82338663-82338682 | Msa1130220:intron | 10.0% |
| !! | AAAAAAAAAAACTATGTATT+TGG | + | chr7_3:82338842-82338861 | None:intergenic | 10.0% |
| !! | TTATTTGTAATTAAAATTGA+TGG | - | chr7_3:82339610-82339629 | Msa1130220:intron | 10.0% |
| !!! | ATAATACAAAGTATAATTTT+CGG | + | chr7_3:82340079-82340098 | None:intergenic | 10.0% |
| !!! | TTTTTCTTACAAAAATAACA+GGG | + | chr7_3:82332599-82332618 | None:intergenic | 15.0% |
| !! | AATAATAATAATAATTGGAC+AGG | - | chr7_3:82332626-82332645 | Msa1130220:CDS | 15.0% |
| !! | AAAAACATTAATTATAATCG+AGG | - | chr7_3:82333073-82333092 | Msa1130220:intron | 15.0% |
| !!! | TCAAAAAGTTTGATTTTAAA+AGG | - | chr7_3:82333097-82333116 | Msa1130220:intron | 15.0% |
| !!! | TTTTTTCAAATTTCATGTAA+AGG | - | chr7_3:82333451-82333470 | Msa1130220:CDS | 15.0% |
| !! | AAATAGTTTAGTCATTTAAA+GGG | + | chr7_3:82333974-82333993 | None:intergenic | 15.0% |
| !! | AAAATAGTTTAGTCATTTAA+AGG | + | chr7_3:82333975-82333994 | None:intergenic | 15.0% |
| !! | ATTATAGAAGAAAATCAATT+TGG | + | chr7_3:82334270-82334289 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTAATTTGTTACT+TGG | + | chr7_3:82334659-82334678 | None:intergenic | 15.0% |
| !! | AAACAAAATAAATTGCTAAA+GGG | + | chr7_3:82335279-82335298 | None:intergenic | 15.0% |
| !! | ATAAAATTCAATCACATTTA+TGG | - | chr7_3:82335610-82335629 | Msa1130220:intron | 15.0% |
| !! | ATAATATGTTAAACAGATAA+AGG | - | chr7_3:82335884-82335903 | Msa1130220:intron | 15.0% |
| !! | TAATATGTTAAACAGATAAA+GGG | - | chr7_3:82335885-82335904 | Msa1130220:intron | 15.0% |
| !!! | TAGTATTTTGATACTTATAT+AGG | + | chr7_3:82336927-82336946 | None:intergenic | 15.0% |
| !! | ATAAAGTTAATAGCTTAAAT+TGG | + | chr7_3:82337034-82337053 | None:intergenic | 15.0% |
| !!! | CTTTAAAAATGAAAAGTAAA+AGG | - | chr7_3:82337349-82337368 | Msa1130220:intron | 15.0% |
| !!! | TTTCGAAAACATATATATTT+TGG | - | chr7_3:82337663-82337682 | Msa1130220:intron | 15.0% |
| !! | TACAAAATTAACATAAAAAC+AGG | - | chr7_3:82338054-82338073 | Msa1130220:intron | 15.0% |
| !! | ACAAAATTAACATAAAAACA+GGG | - | chr7_3:82338055-82338074 | Msa1130220:intron | 15.0% |
| !!! | AAATTTTTAATCACTACTTT+TGG | + | chr7_3:82338082-82338101 | None:intergenic | 15.0% |
| !!! | GTAGTGATTAAAAATTTTAT+AGG | - | chr7_3:82338085-82338104 | Msa1130220:intron | 15.0% |
| !!! | ATTTTTAAATTGCTTGAAAA+AGG | - | chr7_3:82338472-82338491 | Msa1130220:intron | 15.0% |
| !!! | TTTTTAAATTGCTTGAAAAA+GGG | - | chr7_3:82338473-82338492 | Msa1130220:intron | 15.0% |
| !!! | TTTCGAAAAATGATATATTT+TGG | - | chr7_3:82338542-82338561 | Msa1130220:intron | 15.0% |
| !!! | TTCGAAAAATGATATATTTT+GGG | - | chr7_3:82338543-82338562 | Msa1130220:intron | 15.0% |
| !!! | TGTTTCAAAAAGATATATTT+TGG | - | chr7_3:82338598-82338617 | Msa1130220:intron | 15.0% |
| !!! | GTTTCAAAAAGATATATTTT+GGG | - | chr7_3:82338599-82338618 | Msa1130220:intron | 15.0% |
| !!! | GTTTTGAAATTGTTTAAAAA+AGG | - | chr7_3:82338685-82338704 | Msa1130220:intron | 15.0% |
| !!! | TTTTGAAATTGTTTAGAAAA+AGG | - | chr7_3:82338743-82338762 | Msa1130220:intron | 15.0% |
| !!! | TTTAGAAAAAGGTAATATTT+TGG | - | chr7_3:82338754-82338773 | Msa1130220:intron | 15.0% |
| !!! | ATATGATTTTGAAATTGTTT+AGG | - | chr7_3:82337646-82337665 | Msa1130220:intron | 15.0% |
| !!! | TATGATTTTGAAATTGTTTA+GGG | - | chr7_3:82338738-82338757 | Msa1130220:intron | 15.0% |
| !!! | ACATTTAAGTTTAAAAATGA+GGG | + | chr7_3:82339012-82339031 | None:intergenic | 15.0% |
| !!! | TACATTTAAGTTTAAAAATG+AGG | + | chr7_3:82339013-82339032 | None:intergenic | 15.0% |
| !!! | TGTACTAATTTTTATAGAAA+TGG | + | chr7_3:82339212-82339231 | None:intergenic | 15.0% |
| !!! | TTTTACAAACACTTTAATTT+AGG | - | chr7_3:82340453-82340472 | Msa1130220:CDS | 15.0% |
| !!! | CTTTTTCTTACAAAAATAAC+AGG | + | chr7_3:82332600-82332619 | None:intergenic | 20.0% |
| !!! | ATTGCAAATGTTGATAAAAA+AGG | + | chr7_3:82333418-82333437 | None:intergenic | 20.0% |
| !! | AGTTAAATATTTATAGCGTT+TGG | - | chr7_3:82334605-82334624 | Msa1130220:intron | 20.0% |
| !! | ATTAATTTATTCTAACAGTC+CGG | - | chr7_3:82334872-82334891 | Msa1130220:intron | 20.0% |
| !! | ATGAAATATGAATTCAAGAA+AGG | + | chr7_3:82334983-82335002 | None:intergenic | 20.0% |
| !! | AACAAAATAAATTGCTAAAG+GGG | + | chr7_3:82335278-82335297 | None:intergenic | 20.0% |
| !! | GAAACAAAATAAATTGCTAA+AGG | + | chr7_3:82335280-82335299 | None:intergenic | 20.0% |
| !! | ACATATACTTAGTAGAAAAT+TGG | + | chr7_3:82335818-82335837 | None:intergenic | 20.0% |
| !! | TACAACAAAGTAAAATAGAA+GGG | + | chr7_3:82335842-82335861 | None:intergenic | 20.0% |
| !! | TTACAACAAAGTAAAATAGA+AGG | + | chr7_3:82335843-82335862 | None:intergenic | 20.0% |
| !!! | GTAGTTTAGAATAAGTTAAA+AGG | + | chr7_3:82336666-82336685 | None:intergenic | 20.0% |
| !! | TAAAACTTGTATCTATCTAA+AGG | - | chr7_3:82336816-82336835 | Msa1130220:intron | 20.0% |
| !! | TCATGTTAGAATATTAAAGT+TGG | + | chr7_3:82337282-82337301 | None:intergenic | 20.0% |
| !!! | AATGAAAATGAACTTTTATG+TGG | - | chr7_3:82337402-82337421 | Msa1130220:intron | 20.0% |
| !! | ATGATACCAATATAATGTAA+AGG | - | chr7_3:82337450-82337469 | Msa1130220:intron | 20.0% |
| !!! | ATTTTGAAATTGCTTCAAAA+TGG | - | chr7_3:82337594-82337613 | Msa1130220:intron | 20.0% |
| !!! | AAGTTGAAGAAAATTTTAGA+GGG | + | chr7_3:82337761-82337780 | None:intergenic | 20.0% |
| !!! | AAAGTTGAAGAAAATTTTAG+AGG | + | chr7_3:82337762-82337781 | None:intergenic | 20.0% |
| !! | TACATATGAGTTTACTTTAA+AGG | + | chr7_3:82337824-82337843 | None:intergenic | 20.0% |
| !!! | AAAAGTTGGTATATTTATAG+AGG | - | chr7_3:82338147-82338166 | Msa1130220:intron | 20.0% |
| !!! | AAAAGTTGGTATATTTATAG+AGG | - | chr7_3:82338147-82338166 | Msa1130220:intron | 20.0% |
| !!! | AAAAGTTGGTATATTTATAG+AGG | - | chr7_3:82338147-82338166 | Msa1130220:intron | 20.0% |
| !!! | ATGATTTTGAAATTGTTTAG+GGG | - | chr7_3:82338739-82338758 | Msa1130220:intron | 20.0% |
| !!! | TTTATTTTCGTATTGATCTA+AGG | - | chr7_3:82339122-82339141 | Msa1130220:intron | 20.0% |
| !! | CATAATATTAATCTCAACAT+TGG | + | chr7_3:82340048-82340067 | None:intergenic | 20.0% |
| !! | TTTTCTTCTTCTTAACCTTT+AGG | + | chr7_3:82332555-82332574 | None:intergenic | 25.0% |
| ! | TATATTGCAGTGATAGTATA+CGG | + | chr7_3:82333188-82333207 | None:intergenic | 25.0% |
| ! | AATATTACCTCTAAGTCTAA+GGG | + | chr7_3:82333394-82333413 | None:intergenic | 25.0% |
| ! | AAATATTACCTCTAAGTCTA+AGG | + | chr7_3:82333395-82333414 | None:intergenic | 25.0% |
| ! | CAAATTTCATGTAAAGGAAA+AGG | - | chr7_3:82333457-82333476 | Msa1130220:CDS | 25.0% |
| !!! | ATTTTTTGTTAGACGTAATG+CGG | + | chr7_3:82333571-82333590 | None:intergenic | 25.0% |
| ! | TCAAATTTCATTTACAGACA+AGG | + | chr7_3:82333701-82333720 | None:intergenic | 25.0% |
| ! | CATGCTACTAAATTGAATAA+AGG | + | chr7_3:82333752-82333771 | None:intergenic | 25.0% |
| ! | CTCTATATAATCTCATTTAG+AGG | + | chr7_3:82333812-82333831 | None:intergenic | 25.0% |
| !! | AATTTGATTTACATGAAGCA+TGG | - | chr7_3:82333834-82333853 | Msa1130220:intron | 25.0% |
| !! | TACAAATTTCTTGATAACTG+GGG | + | chr7_3:82334194-82334213 | None:intergenic | 25.0% |
| !! | CTACAAATTTCTTGATAACT+GGG | + | chr7_3:82334195-82334214 | None:intergenic | 25.0% |
| !! | TCTACAAATTTCTTGATAAC+TGG | + | chr7_3:82334196-82334215 | None:intergenic | 25.0% |
| ! | ATCCTCTATATATATTAAGC+AGG | - | chr7_3:82334305-82334324 | Msa1130220:intron | 25.0% |
| ! | TTCCTGCTTAATATATATAG+AGG | + | chr7_3:82334310-82334329 | None:intergenic | 25.0% |
| ! | TATATCAATGGCTTATATTG+AGG | + | chr7_3:82334850-82334869 | None:intergenic | 25.0% |
| !!! | AACTTTTTCATCATAAGATC+CGG | + | chr7_3:82334894-82334913 | None:intergenic | 25.0% |
| !!! | GTTACAAAGTGTTATTTTAG+TGG | - | chr7_3:82334914-82334933 | Msa1130220:intron | 25.0% |
| !!! | TTATTTTAGTGGTGTAAGTT+GGG | - | chr7_3:82334925-82334944 | Msa1130220:intron | 25.0% |
| ! | TAGCACATTTCAAAATTACA+GGG | + | chr7_3:82335061-82335080 | None:intergenic | 25.0% |
| ! | ATAGCACATTTCAAAATTAC+AGG | + | chr7_3:82335062-82335081 | None:intergenic | 25.0% |
| ! | AATCTAATCGTAGAAAAAAG+TGG | - | chr7_3:82335137-82335156 | Msa1130220:intron | 25.0% |
| ! | AAAAAAGGCTAAGTATAGTT+TGG | + | chr7_3:82335191-82335210 | None:intergenic | 25.0% |
| !!! | TATACTTAGCCTTTTTTGAA+TGG | - | chr7_3:82335194-82335213 | Msa1130220:intron | 25.0% |
| ! | TAACATTTGCCATTCAAAAA+AGG | + | chr7_3:82335206-82335225 | None:intergenic | 25.0% |
| ! | ACAAAATAAATTGCTAAAGG+GGG | + | chr7_3:82335277-82335296 | None:intergenic | 25.0% |
| !!! | TATTTTGTTTCGATCAAAGT+AGG | - | chr7_3:82335289-82335308 | Msa1130220:intron | 25.0% |
| ! | AAATATCTGCAGAACAATAT+CGG | + | chr7_3:82335409-82335428 | None:intergenic | 25.0% |
| !! | GATATTTTTCGCTTATAGTA+AGG | - | chr7_3:82335422-82335441 | Msa1130220:intron | 25.0% |
| !! | ATTTTTGATATACTTTCGAC+AGG | + | chr7_3:82335592-82335611 | None:intergenic | 25.0% |
| ! | AATTCAATCACATTTATGGT+AGG | - | chr7_3:82335614-82335633 | Msa1130220:intron | 25.0% |
| ! | TCACAAATGTTCTTGTAAAA+AGG | + | chr7_3:82335776-82335795 | None:intergenic | 25.0% |
| ! | GAATTTACACAATAGCTTAT+TGG | + | chr7_3:82336119-82336138 | None:intergenic | 25.0% |
| ! | GTATTATTGCACTTTAAGTA+TGG | - | chr7_3:82336565-82336584 | Msa1130220:intron | 25.0% |
| !!! | CAACTTATTTTCTTCATTTC+CGG | - | chr7_3:82336751-82336770 | Msa1130220:intron | 25.0% |
| !!! | GATACAAGTTTTAACTGAAT+GGG | + | chr7_3:82336809-82336828 | None:intergenic | 25.0% |
| !!! | AGATACAAGTTTTAACTGAA+TGG | + | chr7_3:82336810-82336829 | None:intergenic | 25.0% |
| ! | GTAGTTCCTTTACATTATAT+TGG | + | chr7_3:82337459-82337478 | None:intergenic | 25.0% |
| !!! | TCATTAGCGGTTTTTTTTAA+TGG | + | chr7_3:82337481-82337500 | None:intergenic | 25.0% |
| !! | TGAAGATGGAAAATTTTTGA+GGG | + | chr7_3:82337789-82337808 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTTCACTTT+TGG | - | chr7_3:82337793-82337812 | Msa1130220:intron | 25.0% |
| !! | TATGAGTTTACTTTAAAGGA+GGG | + | chr7_3:82337820-82337839 | None:intergenic | 25.0% |
| !! | ATATGAGTTTACTTTAAAGG+AGG | + | chr7_3:82337821-82337840 | None:intergenic | 25.0% |
| ! | TTATAGGGATTAAAAGTTGA+AGG | - | chr7_3:82338101-82338120 | Msa1130220:intron | 25.0% |
| !!! | CTAGGAATTCTTTTTAGTTA+AGG | + | chr7_3:82338936-82338955 | None:intergenic | 25.0% |
| ! | ATTCTGATAAATCTAGAAAG+AGG | - | chr7_3:82339791-82339810 | Msa1130220:intron | 25.0% |
| ! | AATAAAGACGAATATAGCAA+TGG | + | chr7_3:82339978-82339997 | None:intergenic | 25.0% |
| ! | TTTATCAAAGATGTTTGAGT+AGG | - | chr7_3:82340008-82340027 | Msa1130220:CDS | 25.0% |
| ! | AAGAGATAAAGAAAAATACC+TGG | + | chr7_3:82340259-82340278 | None:intergenic | 25.0% |
| !!! | AAGCTGAAAAGTATTAGTTT+TGG | - | chr7_3:82340530-82340549 | Msa1130220:CDS | 25.0% |
| !!! | AGCTGAAAAGTATTAGTTTT+GGG | - | chr7_3:82340531-82340550 | Msa1130220:CDS | 25.0% |
| ! | AAACCTCTGAATCTCAATTT+TGG | - | chr7_3:82332756-82332775 | Msa1130220:intron | 30.0% |
| TCGCGAGTTTGATAAAATAA+AGG | - | chr7_3:82333130-82333149 | Msa1130220:intron | 30.0% | |
| CGCGAGTTTGATAAAATAAA+GGG | - | chr7_3:82333131-82333150 | Msa1130220:intron | 30.0% | |
| !! | ATTTGTTGCAGTTTTCTCTT+CGG | + | chr7_3:82333310-82333329 | None:intergenic | 30.0% |
| AAGAGAAAACTGCAACAAAT+TGG | - | chr7_3:82333310-82333329 | Msa1130220:intron | 30.0% | |
| TAAAACCACATGTTGTTAAG+TGG | + | chr7_3:82333365-82333384 | None:intergenic | 30.0% | |
| GTTTCATGAGTAAATGACAA+TGG | + | chr7_3:82333636-82333655 | None:intergenic | 30.0% | |
| AATTGCGTAGATATGAACAA+AGG | + | chr7_3:82333661-82333680 | None:intergenic | 30.0% | |
| GTTCATATCTACGCAATTAA+TGG | - | chr7_3:82333663-82333682 | Msa1130220:intron | 30.0% | |
| TCATTTACAGACAAGGAAAA+TGG | + | chr7_3:82333694-82333713 | None:intergenic | 30.0% | |
| !! | CCTTTCAAATTTGTTGAATG+AGG | + | chr7_3:82333926-82333945 | None:intergenic | 30.0% |
| CCTCATTCAACAAATTTGAA+AGG | - | chr7_3:82333923-82333942 | Msa1130220:intron | 30.0% | |
| ! | ATAATACACAGGACTTCTTT+TGG | - | chr7_3:82334243-82334262 | Msa1130220:intron | 30.0% |
| ! | TAATACACAGGACTTCTTTT+GGG | - | chr7_3:82334244-82334263 | Msa1130220:intron | 30.0% |
| AAAATAGTCACTCAATCAGA+AGG | - | chr7_3:82334328-82334347 | Msa1130220:intron | 30.0% | |
| ! | ATTGTTCTGTTACTTATGAG+TGG | + | chr7_3:82334359-82334378 | None:intergenic | 30.0% |
| ATTTGTATGTTTGCATCATC+AGG | + | chr7_3:82334511-82334530 | None:intergenic | 30.0% | |
| !!! | ACGATATTGATTCCCAATTT+TGG | + | chr7_3:82334550-82334569 | None:intergenic | 30.0% |
| TAAAAGTCTACAGAAGAGAA+GGG | + | chr7_3:82334710-82334729 | None:intergenic | 30.0% | |
| TTAAAAGTCTACAGAAGAGA+AGG | + | chr7_3:82334711-82334730 | None:intergenic | 30.0% | |
| ! | TTGATGCTATGTTTTCTTGA+AGG | - | chr7_3:82334778-82334797 | Msa1130220:intron | 30.0% |
| ! | GTAAGTTGAAGCAATGTATT+TGG | + | chr7_3:82334823-82334842 | None:intergenic | 30.0% |
| !!! | GTTATTTTAGTGGTGTAAGT+TGG | - | chr7_3:82334924-82334943 | Msa1130220:intron | 30.0% |
| !!! | TATTTTAGTGGTGTAAGTTG+GGG | - | chr7_3:82334926-82334945 | Msa1130220:intron | 30.0% |
| !! | ATTTGGTGGTGTAAACTAAA+TGG | - | chr7_3:82334955-82334974 | Msa1130220:intron | 30.0% |
| !! | TAGTCTTTTTCATGACTCTT+CGG | - | chr7_3:82335364-82335383 | Msa1130220:intron | 30.0% |
| CTGACTATTTACGTCAAATT+AGG | + | chr7_3:82335468-82335487 | None:intergenic | 30.0% | |
| CTAATTTGACGTAAATAGTC+AGG | - | chr7_3:82335466-82335485 | Msa1130220:intron | 30.0% | |
| ! | TTCTTGTAAAAAGGAGCTTT+TGG | + | chr7_3:82335767-82335786 | None:intergenic | 30.0% |
| TTTACAAGAACATTTGTGAG+AGG | - | chr7_3:82335777-82335796 | Msa1130220:intron | 30.0% | |
| AGATAAAGGGAATGTTCAAA+TGG | - | chr7_3:82335898-82335917 | Msa1130220:intron | 30.0% | |
| CTATATACGTAACTACTTCA+TGG | + | chr7_3:82335939-82335958 | None:intergenic | 30.0% | |
| AGTTACGTATATAGAGATTG+CGG | - | chr7_3:82335945-82335964 | Msa1130220:intron | 30.0% | |
| !! | TATTCATCAAGTTGATGCAA+AGG | - | chr7_3:82336004-82336023 | Msa1130220:intron | 30.0% |
| AACATTCACGTATCAGAAAT+TGG | + | chr7_3:82336067-82336086 | None:intergenic | 30.0% | |
| ATGAATAACCTTTACGTTGT+AGG | - | chr7_3:82336207-82336226 | Msa1130220:intron | 30.0% | |
| AGCATTTCTTTGATGAAGTT+GGG | + | chr7_3:82336326-82336345 | None:intergenic | 30.0% | |
| AAGCATTTCTTTGATGAAGT+TGG | + | chr7_3:82336327-82336346 | None:intergenic | 30.0% | |
| TCTGAATCAGGTTATGAATA+AGG | + | chr7_3:82336505-82336524 | None:intergenic | 30.0% | |
| TTAAGTATGGAATGTGATTC+TGG | - | chr7_3:82336578-82336597 | Msa1130220:intron | 30.0% | |
| TTCCATCTAAATAGCTGTAA+AGG | - | chr7_3:82336608-82336627 | Msa1130220:intron | 30.0% | |
| TTCCTTTACAGCTATTTAGA+TGG | + | chr7_3:82336613-82336632 | None:intergenic | 30.0% | |
| TTGTATCTATCTAAAGGAGT+TGG | - | chr7_3:82336822-82336841 | Msa1130220:intron | 30.0% | |
| AAATTCTACAAAACTCGTCT+GGG | + | chr7_3:82336904-82336923 | None:intergenic | 30.0% | |
| TAAAGAATTAGTATCCCTTG+CGG | + | chr7_3:82337334-82337353 | None:intergenic | 30.0% | |
| ! | CAGTTCATTTTCATCATTAG+CGG | + | chr7_3:82337494-82337513 | None:intergenic | 30.0% |
| ! | GCTTCAAAATGGATGTATTT+TGG | - | chr7_3:82337605-82337624 | Msa1130220:intron | 30.0% |
| ACGAAAAGTTGACACATTTA+TGG | + | chr7_3:82337732-82337751 | None:intergenic | 30.0% | |
| ! | GTGAAGATGGAAAATTTTTG+AGG | + | chr7_3:82337790-82337809 | None:intergenic | 30.0% |
| AAGTTGAAGGAAAACTTTAG+AGG | - | chr7_3:82338114-82338133 | Msa1130220:intron | 30.0% | |
| AGTTGAAGGAAAACTTTAGA+GGG | - | chr7_3:82338115-82338134 | Msa1130220:intron | 30.0% | |
| TCTCTCTCTGATTATTAACT+TGG | - | chr7_3:82338958-82338977 | Msa1130220:intron | 30.0% | |
| ! | TTTCGTATTGATCTAAGGAA+AGG | - | chr7_3:82339127-82339146 | Msa1130220:intron | 30.0% |
| ! | TTCGTATTGATCTAAGGAAA+GGG | - | chr7_3:82339128-82339147 | Msa1130220:intron | 30.0% |
| AATCGGTAAATAAAACACAG+TGG | + | chr7_3:82339165-82339184 | None:intergenic | 30.0% | |
| CATGAAAATTGAAGGGAAAT+CGG | + | chr7_3:82339182-82339201 | None:intergenic | 30.0% | |
| ! | TTTCTTTGCATTCTTTTGTG+AGG | - | chr7_3:82339305-82339324 | Msa1130220:intron | 30.0% |
| ! | TTCTTTGCATTCTTTTGTGA+GGG | - | chr7_3:82339306-82339325 | Msa1130220:intron | 30.0% |
| ! | TTTTCGCTAGTGAAACATAA+GGG | + | chr7_3:82339399-82339418 | None:intergenic | 30.0% |
| CAATAAAAAGAGCAGAAAGA+CGG | + | chr7_3:82339439-82339458 | None:intergenic | 30.0% | |
| !! | AATCACTATGATAGTGGAAA+TGG | - | chr7_3:82339745-82339764 | Msa1130220:intron | 30.0% |
| TGATAAATCTAGAAAGAGGA+AGG | - | chr7_3:82339795-82339814 | Msa1130220:intron | 30.0% | |
| AAACTTGTGGTGTAAGTTAT+CGG | + | chr7_3:82339869-82339888 | None:intergenic | 30.0% | |
| !!! | AGTTGTTATTTTGTTTGCAG+AGG | - | chr7_3:82340163-82340182 | Msa1130220:intron | 30.0% |
| ATCAAGTTAAGAATCTTCTG+TGG | + | chr7_3:82340194-82340213 | None:intergenic | 30.0% | |
| GAATGCTGAAAATCTTACAA+AGG | - | chr7_3:82340214-82340233 | Msa1130220:intron | 30.0% | |
| AAATCTTACAAAGGAACATG+TGG | - | chr7_3:82340223-82340242 | Msa1130220:intron | 30.0% | |
| TAAAGAAAAATACCTGGAGA+TGG | + | chr7_3:82340253-82340272 | None:intergenic | 30.0% | |
| !!! | GCTGAAAAGTATTAGTTTTG+GGG | - | chr7_3:82340532-82340551 | Msa1130220:CDS | 30.0% |
| GGAAAACCAAAAAGCTAATA+TGG | - | chr7_3:82340553-82340572 | Msa1130220:CDS | 30.0% | |
| AAACCAAAAAGCTAATATGG+TGG | - | chr7_3:82340556-82340575 | Msa1130220:CDS | 30.0% | |
| AATATGGTGGCAAATTTAGT+TGG | - | chr7_3:82340569-82340588 | Msa1130220:CDS | 30.0% | |
| AAATTGGCATTCTTTGAACA+TGG | + | chr7_3:82340656-82340675 | None:intergenic | 30.0% | |
| TAATTGGACAGGAACAAGAT+TGG | - | chr7_3:82332637-82332656 | Msa1130220:CDS | 35.0% | |
| AAACGCGATGATGATATTGA+TGG | + | chr7_3:82332821-82332840 | None:intergenic | 35.0% | |
| ! | TTTTCTCTTCGGATGACAAA+GGG | + | chr7_3:82333299-82333318 | None:intergenic | 35.0% |
| ACAAATTGGCAAAAGCAGTT+AGG | - | chr7_3:82333324-82333343 | Msa1130220:intron | 35.0% | |
| ! | TGAAAACCCCTCTATGTTTT+AGG | - | chr7_3:82333718-82333737 | Msa1130220:intron | 35.0% |
| ! | GAAAACCCCTCTATGTTTTA+GGG | - | chr7_3:82333719-82333738 | Msa1130220:intron | 35.0% |
| !! | AAAACCCCTCTATGTTTTAG+GGG | - | chr7_3:82333720-82333739 | Msa1130220:intron | 35.0% |
| AAAAGCCCCTAAAACATAGA+GGG | + | chr7_3:82333728-82333747 | None:intergenic | 35.0% | |
| TAAAAGCCCCTAAAACATAG+AGG | + | chr7_3:82333729-82333748 | None:intergenic | 35.0% | |
| TTGATTTACATGAAGCATGG+TGG | - | chr7_3:82333837-82333856 | Msa1130220:intron | 35.0% | |
| AGTAAATTCTACAGCATGCA+GGG | + | chr7_3:82334143-82334162 | None:intergenic | 35.0% | |
| ! | TCTTGATAACTGGGGATTAA+TGG | + | chr7_3:82334186-82334205 | None:intergenic | 35.0% |
| AGACTCATTTATGTCAACTC+AGG | - | chr7_3:82334213-82334232 | Msa1130220:intron | 35.0% | |
| CAGGATTGTGTATAATACAC+AGG | - | chr7_3:82334232-82334251 | Msa1130220:intron | 35.0% | |
| ATCATATCCAAACTAGTGGA+GGG | + | chr7_3:82334487-82334506 | None:intergenic | 35.0% | |
| AATCATATCCAAACTAGTGG+AGG | + | chr7_3:82334488-82334507 | None:intergenic | 35.0% | |
| AGGAATCATATCCAAACTAG+TGG | + | chr7_3:82334491-82334510 | None:intergenic | 35.0% | |
| TGACATCACTACACCAAAAT+TGG | - | chr7_3:82334534-82334553 | Msa1130220:intron | 35.0% | |
| GACATCACTACACCAAAATT+GGG | - | chr7_3:82334535-82334554 | Msa1130220:intron | 35.0% | |
| TTACAGCAGTATATCATGAG+CGG | + | chr7_3:82334747-82334766 | None:intergenic | 35.0% | |
| ATATACTGCTGTAAACTCTG+TGG | - | chr7_3:82334753-82334772 | Msa1130220:intron | 35.0% | |
| CTTGAAGGCAAATGATAGTT+TGG | - | chr7_3:82334793-82334812 | Msa1130220:intron | 35.0% | |
| AGTTGAAGCAATGTATTTGG+TGG | + | chr7_3:82334820-82334839 | None:intergenic | 35.0% | |
| ATCAATGGCTTATATTGAGG+TGG | + | chr7_3:82334847-82334866 | None:intergenic | 35.0% | |
| AGACAGACCATAGTAAGATT+TGG | - | chr7_3:82335103-82335122 | Msa1130220:intron | 35.0% | |
| ! | AGACCATAGTAAGATTTGGT+GGG | - | chr7_3:82335107-82335126 | Msa1130220:intron | 35.0% |
| ATTCCCACCAAATCTTACTA+TGG | + | chr7_3:82335113-82335132 | None:intergenic | 35.0% | |
| TAGAAAAAAGTGGTGCAAGT+TGG | - | chr7_3:82335147-82335166 | Msa1130220:intron | 35.0% | |
| !! | TATCAACTGGTTTGAGCTAA+GGG | + | chr7_3:82335249-82335268 | None:intergenic | 35.0% |
| ATAAATTGCTAAAGGGGGTT+GGG | + | chr7_3:82335272-82335291 | None:intergenic | 35.0% | |
| AATAAATTGCTAAAGGGGGT+TGG | + | chr7_3:82335273-82335292 | None:intergenic | 35.0% | |
| TGTTTCGATCAAAGTAGGAT+AGG | - | chr7_3:82335294-82335313 | Msa1130220:intron | 35.0% | |
| ! | TGGTTAGTTACATAGTCCTA+AGG | + | chr7_3:82335564-82335583 | None:intergenic | 35.0% |
| TTTGATATACTTTCGACAGG+CGG | + | chr7_3:82335589-82335608 | None:intergenic | 35.0% | |
| TTCGGTATCAACACCAAATT+TGG | - | chr7_3:82336170-82336189 | Msa1130220:intron | 35.0% | |
| ! | AAACGAAAGCACACCAAATT+TGG | + | chr7_3:82336186-82336205 | None:intergenic | 35.0% |
| TTCTTTGATGAAGTTGGGAT+GGG | + | chr7_3:82336321-82336340 | None:intergenic | 35.0% | |
| TTTCTTTGATGAAGTTGGGA+TGG | + | chr7_3:82336322-82336341 | None:intergenic | 35.0% | |
| AATAGTGCAGCAGTTGTTAT+TGG | - | chr7_3:82336372-82336391 | Msa1130220:intron | 35.0% | |
| !! | TATCGACCACACTATTTCTA+GGG | - | chr7_3:82336455-82336474 | Msa1130220:intron | 35.0% |
| ATTCTCTCTGTATCTGAATC+AGG | + | chr7_3:82336517-82336536 | None:intergenic | 35.0% | |
| TACCTCAACGAAGAATAACA+GGG | + | chr7_3:82336548-82336567 | None:intergenic | 35.0% | |
| ATACCTCAACGAAGAATAAC+AGG | + | chr7_3:82336549-82336568 | None:intergenic | 35.0% | |
| CTAGAGATGACATTAGATTC+TGG | - | chr7_3:82336847-82336866 | Msa1130220:intron | 35.0% | |
| GAAATTCTACAAAACTCGTC+TGG | + | chr7_3:82336905-82336924 | None:intergenic | 35.0% | |
| AAGTAAAAGGAACTGTTACG+TGG | - | chr7_3:82337362-82337381 | Msa1130220:intron | 35.0% | |
| GATGAAAATGAACTGATGTC+AGG | - | chr7_3:82337499-82337518 | Msa1130220:intron | 35.0% | |
| GAGGGACTAAAATGAAAAGT+TGG | - | chr7_3:82338133-82338152 | Msa1130220:intron | 35.0% | |
| AATAATCAGAGAGAGAGACT+AGG | + | chr7_3:82338954-82338973 | None:intergenic | 35.0% | |
| ! | ATTATTAACTTGGCTAGCAC+CGG | - | chr7_3:82338968-82338987 | Msa1130220:intron | 35.0% |
| CCTCTAAGTGCAAAAAACAT+AGG | + | chr7_3:82339041-82339060 | None:intergenic | 35.0% | |
| !!! | CCTATGTTTTTTGCACTTAG+AGG | - | chr7_3:82339038-82339057 | Msa1130220:intron | 35.0% |
| !!! | ACTTTGTTTTCTGCACTTAG+AGG | - | chr7_3:82339068-82339087 | Msa1130220:intron | 35.0% |
| ! | CGATTTCCCTTCAATTTTCA+TGG | - | chr7_3:82339180-82339199 | Msa1130220:intron | 35.0% |
| CACGTACCATGAAAATTGAA+GGG | + | chr7_3:82339189-82339208 | None:intergenic | 35.0% | |
| ! | CTTTTCGCTAGTGAAACATA+AGG | + | chr7_3:82339400-82339419 | None:intergenic | 35.0% |
| ATGTTTCACTAGCGAAAAGA+CGG | - | chr7_3:82339401-82339420 | Msa1130220:intron | 35.0% | |
| ! | AAACACCCTTTCAGCTTTTT+GGG | + | chr7_3:82339660-82339679 | None:intergenic | 35.0% |
| ! | AAAACACCCTTTCAGCTTTT+TGG | + | chr7_3:82339661-82339680 | None:intergenic | 35.0% |
| AGAAGCAATCACTATGATAG+TGG | - | chr7_3:82339739-82339758 | Msa1130220:intron | 35.0% | |
| AAGAGGAAGGATAAGAATGA+TGG | - | chr7_3:82339808-82339827 | Msa1130220:intron | 35.0% | |
| CTTGTCGCAGTTAATCAATT+TGG | - | chr7_3:82339889-82339908 | Msa1130220:CDS | 35.0% | |
| ! | TTTTTGCACATTGAAAACCG+AGG | + | chr7_3:82339933-82339952 | None:intergenic | 35.0% |
| !! | TTATTTTGTTTGCAGAGGCT+AGG | - | chr7_3:82340168-82340187 | Msa1130220:intron | 35.0% |
| ATATCTTGCATCGTCTATGT+CGG | + | chr7_3:82340314-82340333 | None:intergenic | 35.0% | |
| !!! | TTGCCACCATATTAGCTTTT+TGG | + | chr7_3:82340562-82340581 | None:intergenic | 35.0% |
| ! | TGGTTCTGTTACATTTCAAC+CGG | - | chr7_3:82340592-82340611 | Msa1130220:exon | 35.0% |
| TGAGATGCTACAGAAGAAAT+TGG | + | chr7_3:82340672-82340691 | None:intergenic | 35.0% | |
| CTGCCAAAATTGAGATTCAG+AGG | + | chr7_3:82332762-82332781 | None:intergenic | 40.0% | |
| AATCATCATCATCATGGAGG+TGG | + | chr7_3:82332887-82332906 | None:intergenic | 40.0% | |
| CAGAATCATCATCATCATGG+AGG | + | chr7_3:82332890-82332909 | None:intergenic | 40.0% | |
| CAGCAGAATCATCATCATCA+TGG | + | chr7_3:82332893-82332912 | None:intergenic | 40.0% | |
| ACAGTAGCAGATAACACTTC+TGG | + | chr7_3:82333240-82333259 | None:intergenic | 40.0% | |
| TTTCTCTTCGGATGACAAAG+GGG | + | chr7_3:82333298-82333317 | None:intergenic | 40.0% | |
| ! | GTTTTCTCTTCGGATGACAA+AGG | + | chr7_3:82333300-82333319 | None:intergenic | 40.0% |
| ACTTCTACCCTTAGACTTAG+AGG | - | chr7_3:82333384-82333403 | Msa1130220:CDS | 40.0% | |
| AAAGCCCCTAAAACATAGAG+GGG | + | chr7_3:82333727-82333746 | None:intergenic | 40.0% | |
| CATGTCACTAAGTATGCTTG+TGG | - | chr7_3:82333768-82333787 | Msa1130220:intron | 40.0% | |
| AGATAGCGCCTAAAGACATA+TGG | - | chr7_3:82333878-82333897 | Msa1130220:intron | 40.0% | |
| CTCGATGACCATATGTCTTT+AGG | + | chr7_3:82333889-82333908 | None:intergenic | 40.0% | |
| ATATGGTCATCGAGAGTCAA+TGG | - | chr7_3:82333895-82333914 | Msa1130220:intron | 40.0% | |
| ATTGCTACCTTCTCTTCACT+AGG | - | chr7_3:82334068-82334087 | Msa1130220:intron | 40.0% | |
| AGAATCACCTAGTGAAGAGA+AGG | + | chr7_3:82334078-82334097 | None:intergenic | 40.0% | |
| AGCCATGTATATGTGTGTTC+AGG | - | chr7_3:82334114-82334133 | Msa1130220:intron | 40.0% | |
| CACCTGAACACACATATACA+TGG | + | chr7_3:82334119-82334138 | None:intergenic | 40.0% | |
| CATGTATATGTGTGTTCAGG+TGG | - | chr7_3:82334117-82334136 | Msa1130220:intron | 40.0% | |
| CAGTAAATTCTACAGCATGC+AGG | + | chr7_3:82334144-82334163 | None:intergenic | 40.0% | |
| CAACAATGACATTCATGCTC+CGG | - | chr7_3:82334676-82334695 | Msa1130220:intron | 40.0% | |
| GAAGAGAAGGGATAAAAGTC+CGG | + | chr7_3:82334698-82334717 | None:intergenic | 40.0% | |
| TATCATGAGCGGAAAAGGAA+TGG | + | chr7_3:82334736-82334755 | None:intergenic | 40.0% | |
| CAGTATATCATGAGCGGAAA+AGG | + | chr7_3:82334741-82334760 | None:intergenic | 40.0% | |
| ! | GTAAGTTGGGGCATTCTATT+TGG | - | chr7_3:82334938-82334957 | Msa1130220:intron | 40.0% |
| CTTACTATGGTCTGTCTACA+AGG | + | chr7_3:82335100-82335119 | None:intergenic | 40.0% | |
| CAGACCATAGTAAGATTTGG+TGG | - | chr7_3:82335106-82335125 | Msa1130220:intron | 40.0% | |
| !! | GTATCAACTGGTTTGAGCTA+AGG | + | chr7_3:82335250-82335269 | None:intergenic | 40.0% |
| ! | GAAGGCATGAAGTAAATCAC+AGG | + | chr7_3:82335536-82335555 | None:intergenic | 40.0% |
| TTCATGCCTTCATCAACCTT+AGG | - | chr7_3:82335545-82335564 | Msa1130220:intron | 40.0% | |
| !! | CATAGTCCTAAGGTTGATGA+AGG | + | chr7_3:82335554-82335573 | None:intergenic | 40.0% |
| CAATGCTACTCCATTCTCAT+AGG | - | chr7_3:82335670-82335689 | Msa1130220:intron | 40.0% | |
| CTTGATAGAGCCTATGAGAA+TGG | + | chr7_3:82335683-82335702 | None:intergenic | 40.0% | |
| TATTGGTCACATCGTAGACA+AGG | + | chr7_3:82336102-82336121 | None:intergenic | 40.0% | |
| AGAAGTTGCCTACAACGTAA+AGG | + | chr7_3:82336218-82336237 | None:intergenic | 40.0% | |
| TGCAGGAAGTCTATACTGAT+GGG | + | chr7_3:82336258-82336277 | None:intergenic | 40.0% | |
| GTGAAAGTTGGAAGCTAACA+AGG | - | chr7_3:82336281-82336300 | Msa1130220:intron | 40.0% | |
| ! | GTATCGACCACACTATTTCT+AGG | - | chr7_3:82336454-82336473 | Msa1130220:intron | 40.0% |
| !! | ATCGACCACACTATTTCTAG+GGG | - | chr7_3:82336456-82336475 | Msa1130220:intron | 40.0% |
| TTCCCTGTTATTCTTCGTTG+AGG | - | chr7_3:82336543-82336562 | Msa1130220:intron | 40.0% | |
| !!! | TGCGGTTAGAATCGGTTTTT+TGG | + | chr7_3:82337316-82337335 | None:intergenic | 40.0% |
| ! | AAAAACCGATTCTAACCGCA+AGG | - | chr7_3:82337316-82337335 | Msa1130220:intron | 40.0% |
| ! | AAAACCGATTCTAACCGCAA+GGG | - | chr7_3:82337317-82337336 | Msa1130220:intron | 40.0% |
| AAAAAACCACTAACGCCTAG+TGG | + | chr7_3:82337527-82337546 | None:intergenic | 40.0% | |
| GCACGTACCATGAAAATTGA+AGG | + | chr7_3:82339190-82339209 | None:intergenic | 40.0% | |
| AGTCAACCCAAAAAGCTGAA+AGG | - | chr7_3:82339651-82339670 | Msa1130220:intron | 40.0% | |
| GTCAACCCAAAAAGCTGAAA+GGG | - | chr7_3:82339652-82339671 | Msa1130220:intron | 40.0% | |
| TAACTGCGACAAGAAACTTG+TGG | + | chr7_3:82339882-82339901 | None:intergenic | 40.0% | |
| !! | CGTCATAGCAAGAGTATTTG+AGG | + | chr7_3:82340112-82340131 | None:intergenic | 40.0% |
| ATGGTGGCAAATTTAGTTGG+TGG | - | chr7_3:82340572-82340591 | Msa1130220:CDS | 40.0% | |
| !! | TCTTTGAACATGGTTCGGTT+TGG | + | chr7_3:82340646-82340665 | None:intergenic | 40.0% |
| GGCATTCTTTGAACATGGTT+CGG | + | chr7_3:82340651-82340670 | None:intergenic | 40.0% | |
| GCGTCACAGCAGAATGATTT+GGG | + | chr7_3:82332722-82332741 | None:intergenic | 45.0% | |
| TGCGTCACAGCAGAATGATT+TGG | + | chr7_3:82332723-82332742 | None:intergenic | 45.0% | |
| !! | CTCAATTTTGGCAGAGACAG+AGG | - | chr7_3:82332768-82332787 | Msa1130220:intron | 45.0% |
| ! | ATCATCGCGTTTTGCCATTG+CGG | - | chr7_3:82332829-82332848 | Msa1130220:intron | 45.0% |
| TCAACCTCAACTACTTCCAG+TGG | - | chr7_3:82332858-82332877 | Msa1130220:intron | 45.0% | |
| CAACCTCAACTACTTCCAGT+GGG | - | chr7_3:82332859-82332878 | Msa1130220:intron | 45.0% | |
| AACCTCAACTACTTCCAGTG+GGG | - | chr7_3:82332860-82332879 | Msa1130220:intron | 45.0% | |
| CACACATCATTCCACGAACA+TGG | + | chr7_3:82332923-82332942 | None:intergenic | 45.0% | |
| TGTTCGTGGAATGATGTGTG+AGG | - | chr7_3:82332923-82332942 | Msa1130220:intron | 45.0% | |
| GTTCGTGGAATGATGTGTGA+GGG | - | chr7_3:82332924-82332943 | Msa1130220:intron | 45.0% | |
| TTCGGATGACAAAGGGGAAA+GGG | + | chr7_3:82333292-82333311 | None:intergenic | 45.0% | |
| GCACACCACTTAACAACATG+TGG | - | chr7_3:82333357-82333376 | Msa1130220:CDS | 45.0% | |
| !! | AAGCATGGTGGATTAAGTGC+AGG | - | chr7_3:82333849-82333868 | Msa1130220:intron | 45.0% |
| ! | TGGAGGGAGAAAGTGTAAAC+AGG | + | chr7_3:82334471-82334490 | None:intergenic | 45.0% |
| ACTTTCTCCCTCCACTAGTT+TGG | - | chr7_3:82334477-82334496 | Msa1130220:intron | 45.0% | |
| ! | AGTTGGGGCATTCTATTTGG+TGG | - | chr7_3:82334941-82334960 | Msa1130220:intron | 45.0% |
| ! | GCAAGTTGGACCTATCTAGT+TGG | - | chr7_3:82335161-82335180 | Msa1130220:intron | 45.0% |
| AGTTGGACCTATCTAGTTGG+TGG | - | chr7_3:82335164-82335183 | Msa1130220:intron | 45.0% | |
| GTTTGGACCACCAACTAGAT+AGG | + | chr7_3:82335174-82335193 | None:intergenic | 45.0% | |
| TGAGCTAAGGGATAAGGAGT+TGG | + | chr7_3:82335237-82335256 | None:intergenic | 45.0% | |
| ! | CTGGTTTGAGCTAAGGGATA+AGG | + | chr7_3:82335243-82335262 | None:intergenic | 45.0% |
| !!! | CAGGCATTTTTAGCTGCTGA+AGG | - | chr7_3:82335485-82335504 | Msa1130220:intron | 45.0% |
| TCAAGATGCAGAGATACAGC+AGG | - | chr7_3:82335698-82335717 | Msa1130220:intron | 45.0% | |
| ACGTATATAGAGATTGCGGC+AGG | - | chr7_3:82335949-82335968 | Msa1130220:intron | 45.0% | |
| TGATGGGACATCTGAGTTAC+TGG | + | chr7_3:82336242-82336261 | None:intergenic | 45.0% | |
| CTGCAGGAAGTCTATACTGA+TGG | + | chr7_3:82336259-82336278 | None:intergenic | 45.0% | |
| TTGATGAAGTTGGGATGGGA+GGG | + | chr7_3:82336317-82336336 | None:intergenic | 45.0% | |
| TTTGATGAAGTTGGGATGGG+AGG | + | chr7_3:82336318-82336337 | None:intergenic | 45.0% | |
| TGCATCCCCTAGAAATAGTG+TGG | + | chr7_3:82336464-82336483 | None:intergenic | 45.0% | |
| TCCGGCTAAACAATTGTGCT+TGG | - | chr7_3:82336769-82336788 | Msa1130220:intron | 45.0% | |
| CCCAAGCACAATTGTTTAGC+CGG | + | chr7_3:82336773-82336792 | None:intergenic | 45.0% | |
| CCGGCTAAACAATTGTGCTT+GGG | - | chr7_3:82336770-82336789 | Msa1130220:intron | 45.0% | |
| ! | AAACTCGTCTGGGTTAGAGT+AGG | + | chr7_3:82336894-82336913 | None:intergenic | 45.0% |
| GTATCCCTTGCGGTTAGAAT+CGG | + | chr7_3:82337324-82337343 | None:intergenic | 45.0% | |
| AACTGATGTCAGGAACCACT+AGG | - | chr7_3:82337509-82337528 | Msa1130220:intron | 45.0% | |
| GTTGACAGTACGTTCTTCCT+CGG | - | chr7_3:82339913-82339932 | Msa1130220:CDS | 45.0% | |
| GAAAAATACCTGGAGATGGC+TGG | + | chr7_3:82340249-82340268 | None:intergenic | 45.0% | |
| GACGATGCAAGATATGACAC+TGG | - | chr7_3:82340319-82340338 | Msa1130220:CDS | 45.0% | |
| GTCAGACACTAGACACATCT+TGG | - | chr7_3:82340414-82340433 | Msa1130220:CDS | 45.0% | |
| !! | ATAAATTAATAATATATCAA+TGG | + | chr7_3:82334862-82334881 | None:intergenic | 5.0% |
| !!! | GTTTAAAAAAATTATTTTTT+TGG | + | chr7_3:82337906-82337925 | None:intergenic | 5.0% |
| !!! | TATGAATTTTTATATTTTTA+TGG | - | chr7_3:82337941-82337960 | Msa1130220:intron | 5.0% |
| !!! | ATTCAAAAAATAATATATTT+TGG | - | chr7_3:82338426-82338445 | Msa1130220:intron | 5.0% |
| !! | TTTAAATAAAATCAAATATA+TGG | - | chr7_3:82337629-82337648 | Msa1130220:intron | 5.0% |
| !! | TTCAAATAAAATTAAATATA+TGG | - | chr7_3:82338622-82338641 | Msa1130220:intron | 5.0% |
| !! | TTTAAATAAAATCAAATATA+TGG | - | chr7_3:82337629-82337648 | Msa1130220:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTAAAAA+AGG | - | chr7_3:82338850-82338869 | Msa1130220:intron | 5.0% |
| GAGGTTGAACAACACCGCAA+TGG | + | chr7_3:82332846-82332865 | None:intergenic | 50.0% | |
| GCTGTTGTTCTCCATGTTCG+TGG | - | chr7_3:82332909-82332928 | Msa1130220:intron | 50.0% | |
| CTTCGGATGACAAAGGGGAA+AGG | + | chr7_3:82333293-82333312 | None:intergenic | 50.0% | |
| CTTCACTAGGTGATTCTCCG+AGG | - | chr7_3:82334081-82334100 | Msa1130220:intron | 50.0% | |
| GGTGATTCTCCGAGGTTACT+TGG | - | chr7_3:82334089-82334108 | Msa1130220:intron | 50.0% | |
| CATGGCTCTCCAAGTAACCT+CGG | + | chr7_3:82334101-82334120 | None:intergenic | 50.0% | |
| TACTGCCAGGAGAAGGTAAG+GGG | + | chr7_3:82334425-82334444 | None:intergenic | 50.0% | |
| GTACTGCCAGGAGAAGGTAA+GGG | + | chr7_3:82334426-82334445 | None:intergenic | 50.0% | |
| AGTACTGCCAGGAGAAGGTA+AGG | + | chr7_3:82334427-82334446 | None:intergenic | 50.0% | |
| AATGCAGTACTGCCAGGAGA+AGG | + | chr7_3:82334432-82334451 | None:intergenic | 50.0% | |
| TGTCTCAATGCAGTACTGCC+AGG | + | chr7_3:82334438-82334457 | None:intergenic | 50.0% | |
| AAAGGGGGTTGGGTATCAAC+TGG | + | chr7_3:82335262-82335281 | None:intergenic | 50.0% | |
| TATACTTTCGACAGGCGGCT+TGG | + | chr7_3:82335584-82335603 | None:intergenic | 50.0% | |
| CTTCCTGCAGCTGTGAAAGT+TGG | - | chr7_3:82336269-82336288 | Msa1130220:intron | 50.0% | |
| CTTCCAACTTTCACAGCTGC+AGG | + | chr7_3:82336275-82336294 | None:intergenic | 50.0% | |
| TGATGAAGTTGGGATGGGAG+GGG | + | chr7_3:82336316-82336335 | None:intergenic | 50.0% | |
| GGAGGGACCAAAAGTGAAGA+TGG | + | chr7_3:82337803-82337822 | None:intergenic | 50.0% | |
| GACATACCTTCTCTCGTGAC+CGG | + | chr7_3:82338990-82339009 | None:intergenic | 50.0% | |
| ! | AGAAGAAGCCTCGAGTTGCT+TGG | - | chr7_3:82339842-82339861 | Msa1130220:intron | 50.0% |
| TTATCGGACCAAGCAACTCG+AGG | + | chr7_3:82339853-82339872 | None:intergenic | 50.0% | |
| ! | CAACCGGCTTACGTTTCAAC+CGG | - | chr7_3:82340608-82340627 | Msa1130220:five_prime_UTR | 50.0% |
| TGAGCTTCAGCAGCTGCTGT+TGG | + | chr7_3:82332797-82332816 | None:intergenic | 55.0% | |
| GTCCCCACTGGAAGTAGTTG+AGG | + | chr7_3:82332865-82332884 | None:intergenic | 55.0% | |
| CGTAGACAAGGTCGTGCACT+AGG | + | chr7_3:82336090-82336109 | None:intergenic | 55.0% | |
| CAGGAACCACTAGGCGTTAG+TGG | - | chr7_3:82337518-82337537 | Msa1130220:intron | 55.0% | |
| CGAGGCTTCTTCTGCGTTGT+TGG | + | chr7_3:82339835-82339854 | None:intergenic | 55.0% | |
| TGGCCGGTTGAAACGTAAGC+CGG | + | chr7_3:82340614-82340633 | None:intergenic | 55.0% | |
| ATCATGGAGGTGGTCCCCAC+TGG | + | chr7_3:82332877-82332896 | None:intergenic | 60.0% | |
| TCCCTCCCCTTACCTTCTCC+TGG | - | chr7_3:82334417-82334436 | Msa1130220:intron | 60.0% | |
| GCCAGGAGAAGGTAAGGGGA+GGG | + | chr7_3:82334421-82334440 | None:intergenic | 60.0% | |
| TGCCAGGAGAAGGTAAGGGG+AGG | + | chr7_3:82334422-82334441 | None:intergenic | 60.0% | |
| CGGCAGGATTGTTGCGAGTG+TGG | - | chr7_3:82335965-82335984 | Msa1130220:intron | 60.0% | |
| !! | CTAGCACCGGTCACGAGAGA+AGG | - | chr7_3:82338981-82339000 | Msa1130220:intron | 60.0% |
| ACATGTGGCCAGCCATCTCC+AGG | - | chr7_3:82340238-82340257 | Msa1130220:intron | 60.0% | |
| !! | GTTCGGTTTGGCGCGAGCTA+TGG | + | chr7_3:82340634-82340653 | None:intergenic | 60.0% |
| GGTTTGGCGCGAGCTATGGC+CGG | + | chr7_3:82340630-82340649 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82332548 | 82340721 | 82332548 | ID=Msa1130220;Name=Msa1130220 |
| chr7_3 | mRNA | 82332548 | 82340721 | 82332548 | ID=Msa1130220-mRNA-1;Parent=Msa1130220;Name=Msa1130220-mRNA-1;_AED=0.62;_eAED=0.62;_QI=118|0.2|0.33|0.33|0.6|0.83|6|0|304 |
| chr7_3 | exon | 82332548 | 82332751 | 82332548 | ID=Msa1130220-mRNA-1:exon:24277;Parent=Msa1130220-mRNA-1 |
| chr7_3 | exon | 82333010 | 82333086 | 82333010 | ID=Msa1130220-mRNA-1:exon:24276;Parent=Msa1130220-mRNA-1 |
| chr7_3 | exon | 82333350 | 82333490 | 82333350 | ID=Msa1130220-mRNA-1:exon:24275;Parent=Msa1130220-mRNA-1 |
| chr7_3 | exon | 82334505 | 82334510 | 82334505 | ID=Msa1130220-mRNA-1:exon:24274;Parent=Msa1130220-mRNA-1 |
| chr7_3 | exon | 82339864 | 82340032 | 82339864 | ID=Msa1130220-mRNA-1:exon:24273;Parent=Msa1130220-mRNA-1 |
| chr7_3 | exon | 82340286 | 82340721 | 82340286 | ID=Msa1130220-mRNA-1:exon:24272;Parent=Msa1130220-mRNA-1 |
| chr7_3 | five_prime_UTR | 82340604 | 82340721 | 82340604 | ID=Msa1130220-mRNA-1:five_prime_utr;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82340286 | 82340603 | 82340286 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82339864 | 82340032 | 82339864 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82334505 | 82334510 | 82334505 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82333350 | 82333490 | 82333350 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82333010 | 82333086 | 82333010 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| chr7_3 | CDS | 82332548 | 82332751 | 82332548 | ID=Msa1130220-mRNA-1:cds;Parent=Msa1130220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
