AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1356680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356680 MtrunA17_Chr5g0397071 93.220 354 21 1 1 354 1 351 0.0 609
Msa1356680 MtrunA17_Chr1g0169451 44.589 231 96 5 139 352 149 364 1.46e-51 175
Msa1356680 MtrunA17_Chr7g0249231 36.364 209 116 4 148 350 82 279 6.70e-28 110
Msa1356680 MtrunA17_Chr1g0210221 35.135 222 118 5 141 345 7 219 8.80e-27 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1356680 AT1G64150.1 70.847 295 71 4 73 353 76 369 5.63e-122 356
Msa1356680 AT4G13590.2 43.946 223 109 5 139 352 143 358 3.46e-51 174
Msa1356680 AT4G13590.1 43.946 223 109 5 139 352 143 358 3.97e-51 174
Msa1356680 AT5G36290.1 35.681 213 121 3 144 350 87 289 6.12e-29 114
Msa1356680 AT5G36290.2 35.681 213 121 3 144 350 87 289 6.12e-29 114
Msa1356680 AT1G68650.1 34.842 221 131 3 135 345 1 218 1.28e-26 105
Msa1356680 AT1G25520.1 34.081 223 120 5 141 345 7 220 1.44e-23 97.8

Find 78 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATTCAATTCCTATATT+TGG 0.111357 tig0015854:+23424 Msa1356680:CDS
ATTTCTAATTCCTTCTTCTT+TGG 0.146294 tig0015854:-22952 None:intergenic
TTTCTAATTCCTTCTTCTTT+GGG 0.185709 tig0015854:-22951 None:intergenic
TGGTGGCTCTTAAATGGTTT+TGG 0.262359 tig0015854:-23012 None:intergenic
GAAAAGTGGTGGCTCTTAAA+TGG 0.270841 tig0015854:-23018 None:intergenic
GCGGGACTTATCCAAGAAAT+TGG 0.296916 tig0015854:+22861 Msa1356680:five_prime_UTR
TGCAGCAGCTTCTTCACCCT+TGG 0.304179 tig0015854:+26236 Msa1356680:CDS
TTGACGAACTCTTGCCGTTC+AGG 0.307648 tig0015854:+24707 Msa1356680:CDS
ATTGACTTCAGGTGTACTTC+GGG 0.333621 tig0015854:+25564 Msa1356680:intron
GTACTTGGTGGCTCTTTACT+AGG 0.355968 tig0015854:+26759 Msa1356680:CDS
TATTGCTGCTGTTTGCCTAT+TGG 0.359627 tig0015854:+25331 Msa1356680:CDS
TCACCCTTGGGAGTCATAGC+TGG 0.372547 tig0015854:+26249 Msa1356680:CDS
CTTACTGGACATAGTTTATG+AGG 0.386755 tig0015854:-27592 None:intergenic
GCAGCAGCTTCTTCACCCTT+GGG 0.388248 tig0015854:+26237 Msa1356680:CDS
CGCACTTCAACATACTTATC+CGG 0.403598 tig0015854:+23372 Msa1356680:CDS
CTATTGTACAATTTCAAATA+CGG 0.406878 tig0015854:-27458 None:intergenic
AATTCCTTCTTCTTTGGGGC+CGG 0.417629 tig0015854:-22946 None:intergenic
TTCCTTCTTCTTTGGGGCCG+GGG 0.421452 tig0015854:-22944 None:intergenic
ATTCCTTCTTCTTTGGGGCC+GGG 0.426106 tig0015854:-22945 None:intergenic
TCACCGACATCTCCAAATAT+AGG 0.430048 tig0015854:-23436 None:intergenic
AATTGACTTCAGGTGTACTT+CGG 0.438568 tig0015854:+25563 Msa1356680:intron
CTTCGGGGTCTCTACCCTGC+TGG 0.449149 tig0015854:+25580 Msa1356680:CDS
TCCTTCTTCTTTGGGGCCGG+GGG 0.451549 tig0015854:-22943 None:intergenic
TTGCAGAGAAGAGGAGGAGG+AGG 0.451794 tig0015854:-23078 None:intergenic
ACACATTCTGTGTTGCCAAT+TGG 0.451928 tig0015854:-23285 None:intergenic
ACAGCAGCAATATCATCAAT+AGG 0.453364 tig0015854:-25320 None:intergenic
TTGAGATTGCAGAGAAGAGG+AGG 0.454850 tig0015854:-23084 None:intergenic
AATTTGAGATTGCAGAGAAG+AGG 0.460912 tig0015854:-23087 None:intergenic
TACCGATTCTCAATGCCAAT+TGG 0.470082 tig0015854:+23270 Msa1356680:CDS
TGGTCATGGTGTTGCAACTT+TGG 0.476822 tig0015854:+26281 Msa1356680:CDS
AGATTGCAGAGAAGAGGAGG+AGG 0.482578 tig0015854:-23081 None:intergenic
TGCCAATTGGCATTGAGAAT+CGG 0.485672 tig0015854:-23272 None:intergenic
CACTAGATGAGGCATCCAGC+AGG 0.488503 tig0015854:-25595 None:intergenic
AAGGTTATTGCCTACATTGG+AGG 0.491460 tig0015854:+27406 Msa1356680:intron
TTCTAATTCCTTCTTCTTTG+GGG 0.496177 tig0015854:-22950 None:intergenic
TATATGCAGATAGCCGTACT+TGG 0.497430 tig0015854:+26744 Msa1356680:intron
TAGTAAAGAGCCACCAAGTA+CGG 0.507339 tig0015854:-26757 None:intergenic
TTGAAGGTTATTGCCTACAT+TGG 0.509870 tig0015854:+27403 Msa1356680:intron
TCTTCTGATGATACTGATGA+TGG 0.517795 tig0015854:+23307 Msa1356680:CDS
GGGAGTCATAGCTGGATCAC+TGG 0.523241 tig0015854:+26257 Msa1356680:CDS
GTCATAGCTGGATCACTGGC+TGG 0.529444 tig0015854:+26261 Msa1356680:CDS
GCTGGATCACTGGCTGGTCA+TGG 0.529965 tig0015854:+26267 Msa1356680:CDS
ATTCCTATATTTGGAGATGT+CGG 0.536730 tig0015854:+23433 Msa1356680:CDS
ACTTCAGCACTCACCAATTG+TGG 0.537826 tig0015854:-25898 None:intergenic
ACTGTCATATCTGTCGCTCT+AGG 0.541366 tig0015854:+24667 Msa1356680:CDS
TACTTGGTGGCTCTTTACTA+GGG 0.542656 tig0015854:+26760 Msa1356680:CDS
AAATCAGAAGCAGCAACTGC+CGG 0.549140 tig0015854:-23391 None:intergenic
AAAATCAGATGATGAACAGA+AGG 0.549624 tig0015854:+25625 Msa1356680:CDS
AAAGAGCACACCTCCAATGT+AGG 0.554559 tig0015854:-27416 None:intergenic
GGGTGAAGAAGCTGCTGCAA+GGG 0.562488 tig0015854:-26232 None:intergenic
TTTATGAGGATTACAATGAA+AGG 0.566528 tig0015854:-27578 None:intergenic
AGGGTGAAGAAGCTGCTGCA+AGG 0.572131 tig0015854:-26233 None:intergenic
ATGCAGATAGCCGTACTTGG+TGG 0.574843 tig0015854:+26747 Msa1356680:intron
TTAGCAGCTAGAAATTCAGC+TGG 0.576869 tig0015854:+24219 Msa1356680:CDS
CAAAGCAAAGGTGAGGTGGT+TGG 0.577742 tig0015854:+22828 Msa1356680:five_prime_UTR
CAGAAGAAAATCCTCTCCCC+CGG 0.588208 tig0015854:+22927 Msa1356680:five_prime_UTR
GATGTCGGTGACTTAAGCAC+AGG 0.588767 tig0015854:+23448 Msa1356680:CDS
TGATCCAGCTATGACTCCCA+AGG 0.589560 tig0015854:-26253 None:intergenic
TTCGGCAACAGAGTCATGAT+CGG 0.598041 tig0015854:-23245 None:intergenic
AAAAGTGCTGACAATTGTGC+TGG 0.600725 tig0015854:-25832 None:intergenic
GCAATATAAGCTATGTACAA+AGG 0.605103 tig0015854:+27495 Msa1356680:three_prime_UTR
ATCAGATGATGAACAGAAGG+AGG 0.612938 tig0015854:+25628 Msa1356680:CDS
ACTAGATGAGGCATCCAGCA+GGG 0.613791 tig0015854:-25594 None:intergenic
AGGTGGTGAAAGATGAAAAG+TGG 0.629418 tig0015854:-23032 None:intergenic
GGAAGAGGATATAAGTGAGG+TGG 0.632300 tig0015854:-23049 None:intergenic
GGAAAGAGATAACAAAGCAA+AGG 0.644819 tig0015854:+22816 None:intergenic
ATAACAAAGCAAAGGTGAGG+TGG 0.645409 tig0015854:+22824 Msa1356680:five_prime_UTR
GCTCTTTCTCGTCTTTGCTG+CGG 0.646798 tig0015854:+27432 Msa1356680:CDS
AATGGAAGAGGATATAAGTG+AGG 0.651009 tig0015854:-23052 None:intergenic
TTGACTTCAGGTGTACTTCG+GGG 0.651651 tig0015854:+25565 Msa1356680:intron
GAGATAACAAAGCAAAGGTG+AGG 0.657674 tig0015854:+22821 Msa1356680:five_prime_UTR
GATCCAGCTATGACTCCCAA+GGG 0.660586 tig0015854:-26252 None:intergenic
GGTGGTTGGTTAATGTGACG+CGG 0.670196 tig0015854:+22842 Msa1356680:five_prime_UTR
ATGTTGAAGTGCGAAGAACG+CGG 0.678767 tig0015854:-23362 None:intergenic
GTGGTTGGTTAATGTGACGC+GGG 0.685081 tig0015854:+22843 Msa1356680:five_prime_UTR
ATGTTGGTGAATTGAAAGCG+TGG 0.711543 tig0015854:-23114 None:intergenic
TGGTGAAAGATGAAAAGTGG+TGG 0.722848 tig0015854:-23029 None:intergenic
TTGGTGAATTGAAAGCGTGG+TGG 0.759701 tig0015854:-23111 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTTAATTTCTTTTGA+AGG + tig0015854:27387-27406 Msa1356680:intron 10.0%
!! TTGTAATTATTAAAGTAACA+GGG - tig0015854:23497-23516 None:intergenic 15.0%
!! ATTGTAATTATTAAAGTAAC+AGG - tig0015854:23498-23517 None:intergenic 15.0%
!!! ATTTTCATTTGTAATAATAC+TGG - tig0015854:23536-23555 None:intergenic 15.0%
!!! GAAAGATAATTATTTTTTAG+AGG + tig0015854:24556-24575 Msa1356680:intron 15.0%
!! CTTGAGTAATAAAAATAAAT+AGG - tig0015854:24604-24623 None:intergenic 15.0%
!! TTGTAAAAATTAACATGAAA+AGG + tig0015854:24773-24792 Msa1356680:intron 15.0%
!! TGTAAAAATTAACATGAAAA+GGG + tig0015854:24774-24793 Msa1356680:intron 15.0%
!! ATTATGATAAAACTGTTATA+TGG - tig0015854:24993-25012 None:intergenic 15.0%
!! ACAATAAAATATAAATCCAA+AGG - tig0015854:25155-25174 None:intergenic 15.0%
!!! TTTTAAAACAGAAAATGTAA+AGG - tig0015854:25521-25540 None:intergenic 15.0%
!! GTGAATAGAATTAAAAAAAT+GGG - tig0015854:25707-25726 None:intergenic 15.0%
!! AGTGAATAGAATTAAAAAAA+TGG - tig0015854:25708-25727 None:intergenic 15.0%
!!! AAAAAACTATTTTCTTCAAA+AGG + tig0015854:27006-27025 Msa1356680:intron 15.0%
!! GAATTTCATTAAAATAAGTA+TGG + tig0015854:27084-27103 Msa1356680:intron 15.0%
!!! ATAGCATTAAAATTTTCATA+TGG - tig0015854:27242-27261 None:intergenic 15.0%
!! TTGAATTCAATTCCTATATT+TGG + tig0015854:23424-23443 Msa1356680:CDS 20.0%
!! TGAGATTTATTCGAAAAATT+TGG + tig0015854:24117-24136 Msa1356680:intron 20.0%
!! TATTGATGAGATAAAAATGA+AGG + tig0015854:24141-24160 Msa1356680:intron 20.0%
!! ATTGATGAGATAAAAATGAA+GGG + tig0015854:24142-24161 Msa1356680:intron 20.0%
!! ACAACTTAGAATAATGAAAT+TGG + tig0015854:24386-24405 Msa1356680:intron 20.0%
!!! TCAATTAATTTGCTTGTTTT+TGG + tig0015854:24634-24653 Msa1356680:intron 20.0%
!! AAATAAAAACACAGAGATAA+AGG - tig0015854:24738-24757 None:intergenic 20.0%
!!! AATACAACATCAAATTCTTT+TGG + tig0015854:25010-25029 Msa1356680:intron 20.0%
!!! ATACAACATCAAATTCTTTT+GGG + tig0015854:25011-25030 Msa1356680:intron 20.0%
!! ATAATATTTCCAGAAAACAT+GGG - tig0015854:25113-25132 None:intergenic 20.0%
!! TAAAATATAAATCCAAAGGA+AGG - tig0015854:25151-25170 None:intergenic 20.0%
!! GTATTACAAGTTATAAAGAA+TGG + tig0015854:25241-25260 Msa1356680:intron 20.0%
!!! AACACAAATGCAATTTTTTT+GGG - tig0015854:25477-25496 None:intergenic 20.0%
!!! AAACACAAATGCAATTTTTT+TGG - tig0015854:25478-25497 None:intergenic 20.0%
!!! TAAAAAAGTACTTGTATATC+TGG - tig0015854:25682-25701 None:intergenic 20.0%
!!! ATGTATTAGTTTGTTTGATA+GGG - tig0015854:26019-26038 None:intergenic 20.0%
!!! TTTTGTTTTTTGATCTTGTT+GGG - tig0015854:26577-26596 None:intergenic 20.0%
!!! ATTTTGTTTTTTGATCTTGT+TGG - tig0015854:26578-26597 None:intergenic 20.0%
!! TAAACTTTCCATAATAGTTA+AGG - tig0015854:26631-26650 None:intergenic 20.0%
!! TGTATATCTCTAAATAACTT+TGG + tig0015854:26699-26718 Msa1356680:intron 20.0%
!! GTATATCTCTAAATAACTTT+GGG + tig0015854:26700-26719 Msa1356680:intron 20.0%
!! AGATTCATTAAACAATGTAA+AGG + tig0015854:26939-26958 Msa1356680:intron 20.0%
!! CTATTGTACAATTTCAAATA+CGG - tig0015854:27461-27480 None:intergenic 20.0%
! TTTCTAATTCCTTCTTCTTT+GGG - tig0015854:22954-22973 None:intergenic 25.0%
! ATTTCTAATTCCTTCTTCTT+TGG - tig0015854:22955-22974 None:intergenic 25.0%
!! TTCAATTCACCAACATTTTT+CGG + tig0015854:23121-23140 Msa1356680:CDS 25.0%
! CGAAAATGAAAATACATTTG+AGG - tig0015854:23204-23223 None:intergenic 25.0%
!! ATGTATTTTCATTTTCGCAT+AGG + tig0015854:23207-23226 Msa1356680:intron 25.0%
!! TGTATTTTCATTTTCGCATA+GGG + tig0015854:23208-23227 Msa1356680:intron 25.0%
!!! AGTTATTTCTGTTGTAGTTA+CGG + tig0015854:23572-23591 Msa1356680:intron 25.0%
! TAGCTTATGAAAAGAACTTA+TGG - tig0015854:23688-23707 None:intergenic 25.0%
! GAACTTATGGAAACAATTTA+TGG - tig0015854:23757-23776 None:intergenic 25.0%
!!! ATTGTTTTATGCTTTATCAC+AGG + tig0015854:23920-23939 Msa1356680:intron 25.0%
!!! TTCATCATTGTTTTGCATTT+GGG - tig0015854:24057-24076 None:intergenic 25.0%
!!! TTTCATCATTGTTTTGCATT+TGG - tig0015854:24058-24077 None:intergenic 25.0%
! AAATGCAAAACAATGATGAA+AGG + tig0015854:24057-24076 Msa1356680:intron 25.0%
! TTGATGAGATAAAAATGAAG+GGG + tig0015854:24143-24162 Msa1356680:intron 25.0%
!! TTTTTCATGATTAATCACCA+TGG + tig0015854:24318-24337 Msa1356680:intron 25.0%
!!! CTCTGTGTTTTTATTTTGAA+TGG + tig0015854:24742-24761 Msa1356680:intron 25.0%
! ACCAAAGATAAATAACTCAA+GGG - tig0015854:24865-24884 None:intergenic 25.0%
! TACCAAAGATAAATAACTCA+AGG - tig0015854:24866-24885 None:intergenic 25.0%
! AGCAATATAATGAACACTAT+TGG + tig0015854:24915-24934 Msa1356680:intron 25.0%
! TGATAAAACTGTTATATGGT+TGG - tig0015854:24989-25008 None:intergenic 25.0%
! GATAATATTTCCAGAAAACA+TGG - tig0015854:25114-25133 None:intergenic 25.0%
!! TTAAGATTTCAATTGACTTC+AGG + tig0015854:25553-25572 Msa1356680:intron 25.0%
!!! AAATCATTTTTCTCCACAAT+TGG + tig0015854:25885-25904 Msa1356680:CDS 25.0%
!!! CATGTATTAGTTTGTTTGAT+AGG - tig0015854:26020-26039 None:intergenic 25.0%
! ATCAAACAAACTAATACATG+AGG + tig0015854:26020-26039 Msa1356680:intron 25.0%
! TCAAACAAACTAATACATGA+GGG + tig0015854:26021-26040 Msa1356680:intron 25.0%
!! ATTGACTCATCTTCTAAATA+TGG + tig0015854:26321-26340 Msa1356680:intron 25.0%
! TTGACTCATCTTCTAAATAT+GGG + tig0015854:26322-26341 Msa1356680:intron 25.0%
!! AGTAGTATTTTATTACGCTT+CGG + tig0015854:26394-26413 Msa1356680:intron 25.0%
!! TAGAATGTTTATAAAGCACT+TGG - tig0015854:26480-26499 None:intergenic 25.0%
!!! TTTGTTTTTTGATCTTGTTG+GGG - tig0015854:26576-26595 None:intergenic 25.0%
! GATGAAAATAAATCTACATG+AGG + tig0015854:26601-26620 Msa1356680:intron 25.0%
!!! TTTTTGAAATGGAAAAAACC+AGG - tig0015854:26865-26884 None:intergenic 25.0%
!!! GGTTTTTTCCATTTCAAAAA+TGG + tig0015854:26865-26884 Msa1356680:intron 25.0%
! TTTATGAGGATTACAATGAA+AGG - tig0015854:27581-27600 None:intergenic 25.0%
!! TCTCTGTTTTTCCAATTTCT+TGG - tig0015854:22875-22894 None:intergenic 30.0%
TTCTAATTCCTTCTTCTTTG+GGG - tig0015854:22953-22972 None:intergenic 30.0%
! TCAATTCACCAACATTTTTC+GGG + tig0015854:23122-23141 Msa1356680:CDS 30.0%
CATGATATGAAGTTGAAGAT+AGG - tig0015854:23169-23188 None:intergenic 30.0%
ATTCCTATATTTGGAGATGT+CGG + tig0015854:23433-23452 Msa1356680:CDS 30.0%
GTAGTTACGGTCATTTATTT+AGG + tig0015854:23585-23604 Msa1356680:intron 30.0%
!! TCATTTATTTAGGCCTTGTT+TGG + tig0015854:23595-23614 Msa1356680:intron 30.0%
AAGCTATCCTGAATAGTTTA+CGG + tig0015854:23702-23721 Msa1356680:intron 30.0%
CTTATTTCCGTAAACTATTC+AGG - tig0015854:23712-23731 None:intergenic 30.0%
ATACAACAGTTTCCACATTA+GGG - tig0015854:23830-23849 None:intergenic 30.0%
TATACAACAGTTTCCACATT+AGG - tig0015854:23831-23850 None:intergenic 30.0%
! CTGATATTTTTCTCTGAACT+GGG + tig0015854:23951-23970 Msa1356680:CDS 30.0%
TGATGAGATAAAAATGAAGG+GGG + tig0015854:24144-24163 Msa1356680:intron 30.0%
ATCATGAAAAACACCTTCAA+GGG - tig0015854:24309-24328 None:intergenic 30.0%
AATCATGAAAAACACCTTCA+AGG - tig0015854:24310-24329 None:intergenic 30.0%
TTGAAGTCTAGTGATATTGT+TGG - tig0015854:24442-24461 None:intergenic 30.0%
!!! TTAATTTGCTTGTTTTTGGC+AGG + tig0015854:24638-24657 Msa1356680:intron 30.0%
!!! TAATTTGCTTGTTTTTGGCA+GGG + tig0015854:24639-24658 Msa1356680:intron 30.0%
AGATAAAGGAAAAACCTGAA+CGG - tig0015854:24724-24743 None:intergenic 30.0%
ACCCTTGAGTTATTTATCTT+TGG + tig0015854:24861-24880 Msa1356680:intron 30.0%
AGACATATGAAAAGTGAACA+TGG + tig0015854:24892-24911 Msa1356680:intron 30.0%
TCATCTGCAAAAAGAATCAA+TGG + tig0015854:25047-25066 Msa1356680:intron 30.0%
CTGATCTGACTAATATTCTT+AGG + tig0015854:25213-25232 Msa1356680:intron 30.0%
TTCTTTCGAACTCATCTAAT+AGG + tig0015854:25265-25284 Msa1356680:intron 30.0%
!! TCTAATAGGTTAATTTGCAC+AGG + tig0015854:25279-25298 Msa1356680:intron 30.0%
GGACTAAGATAGTTTATGTA+AGG + tig0015854:25420-25439 Msa1356680:intron 30.0%
! AATTGCATTTGTGTTTGCTA+TGG + tig0015854:25482-25501 Msa1356680:intron 30.0%
!!! CTGTTTTAAAATTGAACACG+TGG + tig0015854:25530-25549 Msa1356680:intron 30.0%
! TCTGTTCATCATCTGATTTT+TGG - tig0015854:25625-25644 None:intergenic 30.0%
AAAATCAGATGATGAACAGA+AGG + tig0015854:25625-25644 Msa1356680:CDS 30.0%
AGGAGGTAATATTTGGTATT+TGG + tig0015854:25645-25664 Msa1356680:intron 30.0%
! TGACGATATTTTCTATGCAA+TGG + tig0015854:25738-25757 Msa1356680:intron 30.0%
! TTAGCAGTTTCTGATTTTTC+TGG + tig0015854:25783-25802 Msa1356680:CDS 30.0%
!! TTTGGAGCAAGATGTTTTTA+TGG - tig0015854:25994-26013 None:intergenic 30.0%
! TTGTACTGATCCAAATTAAC+TGG - tig0015854:26083-26102 None:intergenic 30.0%
TGACTCATCTTCTAAATATG+GGG + tig0015854:26323-26342 Msa1356680:intron 30.0%
! GTAGTATTTTATTACGCTTC+GGG + tig0015854:26395-26414 Msa1356680:intron 30.0%
CAAATTTGGATTTGCCAAAA+TGG + tig0015854:26429-26448 Msa1356680:intron 30.0%
! GATTTTTGTTGCACTTTAGT+TGG - tig0015854:26455-26474 None:intergenic 30.0%
!!! TTGTTTTTTGATCTTGTTGG+GGG - tig0015854:26575-26594 None:intergenic 30.0%
GAGGAAAACCTTAACTATTA+TGG + tig0015854:26620-26639 Msa1356680:intron 30.0%
GCTATCTGCATATAAAAGAA+AGG - tig0015854:26738-26757 None:intergenic 30.0%
! TTTACTAGGGACATTTTTGT+CGG + tig0015854:26773-26792 Msa1356680:CDS 30.0%
!! ATTCTGGTCCATTTTTGAAA+TGG - tig0015854:26876-26895 None:intergenic 30.0%
AATACCCAATTTACGAATTC+TGG - tig0015854:26892-26911 None:intergenic 30.0%
! GTAAAGGAAAGTGAGATTTT+AGG + tig0015854:26955-26974 Msa1356680:intron 30.0%
TACCTATAGAATATAGGTCA+TGG + tig0015854:27032-27051 Msa1356680:intron 30.0%
TTCCATGACCTATATTCTAT+AGG - tig0015854:27037-27056 None:intergenic 30.0%
! TTTGGAATATTACCTCATAC+AGG + tig0015854:27341-27360 Msa1356680:intron 30.0%
GCAATATAAGCTATGTACAA+AGG + tig0015854:27495-27514 Msa1356680:three_prime_UTR 30.0%
AATGGAAGAGGATATAAGTG+AGG - tig0015854:23055-23074 None:intergenic 35.0%
! AATTTGAGATTGCAGAGAAG+AGG - tig0015854:23090-23109 None:intergenic 35.0%
! GCATTGAGAATCGGTATTTT+CGG - tig0015854:23266-23285 None:intergenic 35.0%
TCTTCTGATGATACTGATGA+TGG + tig0015854:23307-23326 Msa1356680:CDS 35.0%
CTAAGGTGTATATCCAAACA+AGG - tig0015854:23611-23630 None:intergenic 35.0%
ATGCTATAAGCGCTTAACTA+AGG - tig0015854:23628-23647 None:intergenic 35.0%
!!! AGACTGTTTTGGAGAACTTA+TGG - tig0015854:23770-23789 None:intergenic 35.0%
! GCTGATATTTTTCTCTGAAC+TGG + tig0015854:23950-23969 Msa1356680:CDS 35.0%
GATGAGATAAAAATGAAGGG+GGG + tig0015854:24145-24164 Msa1356680:intron 35.0%
TGAGTGTTTGATGTTTATGC+AGG + tig0015854:24191-24210 Msa1356680:intron 35.0%
TGTGATTTAGATTCCCTTGA+AGG + tig0015854:24293-24312 Msa1356680:intron 35.0%
TTGCATCAACTTATCAACCA+TGG - tig0015854:24338-24357 None:intergenic 35.0%
TGATGCAATGCAAACAATTG+TGG + tig0015854:24350-24369 Msa1356680:intron 35.0%
GCATTTGTACAAAACTCTTC+AGG + tig0015854:24504-24523 Msa1356680:intron 35.0%
! CTGTTATATGGTTGGTCAAA+GGG - tig0015854:24981-25000 None:intergenic 35.0%
! ACTGTTATATGGTTGGTCAA+AGG - tig0015854:24982-25001 None:intergenic 35.0%
! TAACCAAATCCCATGTTTTC+TGG + tig0015854:25101-25120 Msa1356680:intron 35.0%
TTTCCAGAAAACATGGGATT+TGG - tig0015854:25107-25126 None:intergenic 35.0%
TCAGATCAGATAGTCAGATT+AGG - tig0015854:25202-25221 None:intergenic 35.0%
!! TAGGTTAATTTGCACAGGTT+TGG + tig0015854:25284-25303 Msa1356680:intron 35.0%
ACAGCAGCAATATCATCAAT+AGG - tig0015854:25323-25342 None:intergenic 35.0%
ATGGAGGTGAATTTACCAAT+AGG - tig0015854:25349-25368 None:intergenic 35.0%
TATGTAAACGCGGTAGTATT+AGG + tig0015854:25372-25391 Msa1356680:intron 35.0%
! AATTGACTTCAGGTGTACTT+CGG + tig0015854:25563-25582 Msa1356680:intron 35.0%
!!! TTTTTGGCTATCACTAGATG+AGG - tig0015854:25609-25628 None:intergenic 35.0%
GAACAGAAGGAGGTAATATT+TGG + tig0015854:25638-25657 Msa1356680:intron 35.0%
!! GTTTCTGATTTTTCTGGAGA+CGG + tig0015854:25789-25808 Msa1356680:CDS 35.0%
!! TCTTAGTTTTTGTTGCTGAG+TGG + tig0015854:25856-25875 Msa1356680:CDS 35.0%
!! CTTAGTTTTTGTTGCTGAGT+GGG + tig0015854:25857-25876 Msa1356680:CDS 35.0%
!! TTAGTTTTTGTTGCTGAGTG+GGG + tig0015854:25858-25877 Msa1356680:CDS 35.0%
!! AGTTTGTTTGATAGGGCTTT+TGG - tig0015854:26012-26031 None:intergenic 35.0%
! CTGACTTGAACCAGTTAATT+TGG + tig0015854:26070-26089 Msa1356680:intron 35.0%
TGAAACTGCTTAAAGAGTTC+CGG + tig0015854:26514-26533 Msa1356680:intron 35.0%
GTACCAAATCTAGGTCATTA+GGG - tig0015854:26553-26572 None:intergenic 35.0%
AAACCACAGTATATCAGGAA+CGG - tig0015854:26828-26847 None:intergenic 35.0%
CTAACAAACCACAGTATATC+AGG - tig0015854:26833-26852 None:intergenic 35.0%
! GTTTGTTAGTTTCAACTTCC+TGG + tig0015854:26844-26863 Msa1356680:intron 35.0%
ATGGACCAGAATTCGTAAAT+TGG + tig0015854:26884-26903 Msa1356680:intron 35.0%
TGGACCAGAATTCGTAAATT+GGG + tig0015854:26885-26904 Msa1356680:intron 35.0%
! AGGTGCTACCTATAGAATAT+AGG + tig0015854:27026-27045 Msa1356680:intron 35.0%
! TCTGTGGATAATTTTCTGCA+CGG + tig0015854:27061-27080 Msa1356680:intron 35.0%
CCAAACAGATACACAAATGT+AGG - tig0015854:27326-27345 None:intergenic 35.0%
CCTACATTTGTGTATCTGTT+TGG + tig0015854:27323-27342 Msa1356680:intron 35.0%
TTGAAGGTTATTGCCTACAT+TGG + tig0015854:27403-27422 Msa1356680:intron 35.0%
GAGATAACAAAGCAAAGGTG+AGG + tig0015854:22821-22840 Msa1356680:five_prime_UTR 40.0%
ATAACAAAGCAAAGGTGAGG+TGG + tig0015854:22824-22843 Msa1356680:five_prime_UTR 40.0%
! TGGTGGCTCTTAAATGGTTT+TGG - tig0015854:23015-23034 None:intergenic 40.0%
GAAAAGTGGTGGCTCTTAAA+TGG - tig0015854:23021-23040 None:intergenic 40.0%
TGGTGAAAGATGAAAAGTGG+TGG - tig0015854:23032-23051 None:intergenic 40.0%
AGGTGGTGAAAGATGAAAAG+TGG - tig0015854:23035-23054 None:intergenic 40.0%
! ATGTTGGTGAATTGAAAGCG+TGG - tig0015854:23117-23136 None:intergenic 40.0%
!!! CAACATTTTTCGGGCTACAA+CGG + tig0015854:23131-23150 Msa1356680:CDS 40.0%
ATGAAGTTGAAGATAGGTGC+AGG - tig0015854:23163-23182 None:intergenic 40.0%
!! TACCGATTCTCAATGCCAAT+TGG + tig0015854:23270-23289 Msa1356680:CDS 40.0%
! TGCCAATTGGCATTGAGAAT+CGG - tig0015854:23275-23294 None:intergenic 40.0%
ACACATTCTGTGTTGCCAAT+TGG - tig0015854:23288-23307 None:intergenic 40.0%
CGCACTTCAACATACTTATC+CGG + tig0015854:23372-23391 Msa1356680:CDS 40.0%
TCACCGACATCTCCAAATAT+AGG - tig0015854:23439-23458 None:intergenic 40.0%
! CAACACTAGTGAGACTGTTT+TGG - tig0015854:23781-23800 None:intergenic 40.0%
AACAGATACAGACCCTAATG+TGG + tig0015854:23815-23834 Msa1356680:intron 40.0%
TCGAATAAATCTCAACAGCG+AGG - tig0015854:24111-24130 None:intergenic 40.0%
TTAGCAGCTAGAAATTCAGC+TGG + tig0015854:24219-24238 Msa1356680:CDS 40.0%
!! GTTGTTTTCGTTGGGACATT+TGG + tig0015854:24243-24262 Msa1356680:CDS 40.0%
CAGGCTTATATTGTGTCTAG+AGG + tig0015854:24523-24542 Msa1356680:intron 40.0%
TTCACTTCTAGTCCTTCCTT+TGG + tig0015854:25136-25155 Msa1356680:intron 40.0%
! TATTGCTGCTGTTTGCCTAT+TGG + tig0015854:25331-25350 Msa1356680:CDS 40.0%
CCTCCATGTTTATGTAAACG+CGG + tig0015854:25362-25381 Msa1356680:intron 40.0%
CTACCGCGTTTACATAAACA+TGG - tig0015854:25368-25387 None:intergenic 40.0%
! ATTGACTTCAGGTGTACTTC+GGG + tig0015854:25564-25583 Msa1356680:intron 40.0%
ATCAGATGATGAACAGAAGG+AGG + tig0015854:25628-25647 Msa1356680:CDS 40.0%
CAATGGTTCCTACATTAACC+AGG + tig0015854:25755-25774 Msa1356680:intron 40.0%
TAACTCTGCCTGGTTAATGT+AGG - tig0015854:25766-25785 None:intergenic 40.0%
!! AAAAGTGCTGACAATTGTGC+TGG - tig0015854:25835-25854 None:intergenic 40.0%
GGGAACAGCAAGTACAAATT+TGG + tig0015854:26415-26434 Msa1356680:intron 40.0%
! TGCACTTTAGTTGGCCATTT+TGG - tig0015854:26446-26465 None:intergenic 40.0%
CTTCCCTAATGACCTAGATT+TGG + tig0015854:26547-26566 Msa1356680:intron 40.0%
GGTACCAAATCTAGGTCATT+AGG - tig0015854:26554-26573 None:intergenic 40.0%
TATATGCAGATAGCCGTACT+TGG + tig0015854:26744-26763 Msa1356680:intron 40.0%
TAGTAAAGAGCCACCAAGTA+CGG - tig0015854:26760-26779 None:intergenic 40.0%
! TACTTGGTGGCTCTTTACTA+GGG + tig0015854:26760-26779 Msa1356680:CDS 40.0%
TAGGTCATGGAAATCTTCTG+TGG + tig0015854:27045-27064 Msa1356680:intron 40.0%
! CTGTGGATAATTTTCTGCAC+GGG + tig0015854:27062-27081 Msa1356680:intron 40.0%
TGTTCTTTCGCAGAAAACTC+CGG - tig0015854:27142-27161 None:intergenic 40.0%
CTTAATAACCCCAACCAACA+GGG - tig0015854:27204-27223 None:intergenic 40.0%
TCTTAATAACCCCAACCAAC+AGG - tig0015854:27205-27224 None:intergenic 40.0%
! AGTACCTTGCATTTGAAGCA+TGG + tig0015854:27299-27318 Msa1356680:intron 40.0%
AAGGTTATTGCCTACATTGG+AGG + tig0015854:27406-27425 Msa1356680:intron 40.0%
GCGGGACTTATCCAAGAAAT+TGG + tig0015854:22861-22880 Msa1356680:five_prime_UTR 45.0%
!! AATTCCTTCTTCTTTGGGGC+CGG - tig0015854:22949-22968 None:intergenic 45.0%
GGAAGAGGATATAAGTGAGG+TGG - tig0015854:23052-23071 None:intergenic 45.0%
AGGAGGAGGAAAAATGGAAG+AGG - tig0015854:23067-23086 None:intergenic 45.0%
AAGAGGAGGAGGAGGAAAAA+TGG - tig0015854:23073-23092 None:intergenic 45.0%
TTGAGATTGCAGAGAAGAGG+AGG - tig0015854:23087-23106 None:intergenic 45.0%
! TTGGTGAATTGAAAGCGTGG+TGG - tig0015854:23114-23133 None:intergenic 45.0%
CGTTGTAGCCCGAAAAATGT+TGG - tig0015854:23133-23152 None:intergenic 45.0%
TTCGGCAACAGAGTCATGAT+CGG - tig0015854:23248-23267 None:intergenic 45.0%
ATGTTGAAGTGCGAAGAACG+CGG - tig0015854:23365-23384 None:intergenic 45.0%
AAATCAGAAGCAGCAACTGC+CGG - tig0015854:23394-23413 None:intergenic 45.0%
! GCTGCTTCTGATTTTGCTAC+TGG + tig0015854:23400-23419 Msa1356680:CDS 45.0%
! GCACAGGTTTTGCTTCAGTT+AGG + tig0015854:23464-23483 Msa1356680:intron 45.0%
!!! TCAGCTGGTGTTGTTTTCGT+TGG + tig0015854:24234-24253 Msa1356680:CDS 45.0%
!!! CAGCTGGTGTTGTTTTCGTT+GGG + tig0015854:24235-24254 Msa1356680:CDS 45.0%
ACTGTCATATCTGTCGCTCT+AGG + tig0015854:24667-24686 Msa1356680:CDS 45.0%
TAACATGAAAAGGGCCCAAC+CGG + tig0015854:24783-24802 Msa1356680:intron 45.0%
GCATTTGACTGCAGATCAAG+AGG - tig0015854:24823-24842 None:intergenic 45.0%
AATGCTCTACCACTGAGCTA+TGG + tig0015854:24838-24857 Msa1356680:intron 45.0%
CCGCGTTTACATAAACATGG+AGG - tig0015854:25365-25384 None:intergenic 45.0%
TAGGATTGAGCTAGTGGTGA+AGG + tig0015854:25399-25418 Msa1356680:intron 45.0%
TTGACTTCAGGTGTACTTCG+GGG + tig0015854:25565-25584 Msa1356680:intron 45.0%
!! ATTTTTCTGGAGACGGTGCT+GGG + tig0015854:25796-25815 Msa1356680:CDS 45.0%
ACTTCAGCACTCACCAATTG+TGG - tig0015854:25901-25920 None:intergenic 45.0%
!! CAATTGGTGAGTGCTGAAGT+TGG + tig0015854:25901-25920 Msa1356680:intron 45.0%
TGCTGCAAGGGCTAAATAGT+AGG - tig0015854:26223-26242 None:intergenic 45.0%
!! TGGTCATGGTGTTGCAACTT+TGG + tig0015854:26281-26300 Msa1356680:CDS 45.0%
TTAGGGAAGAGATAGCTCAC+CGG - tig0015854:26536-26555 None:intergenic 45.0%
!! TTGTTGGGGGTACCAAATCT+AGG - tig0015854:26562-26581 None:intergenic 45.0%
! GTACTTGGTGGCTCTTTACT+AGG + tig0015854:26759-26778 Msa1356680:CDS 45.0%
! AGGGACATTTTTGTCGGAGA+AGG + tig0015854:26779-26798 Msa1356680:CDS 45.0%
CATCCGTTCCTGATATACTG+TGG + tig0015854:26822-26841 Msa1356680:intron 45.0%
ATGATGTGAAGTCTCCCTGT+TGG + tig0015854:27187-27206 Msa1356680:intron 45.0%
AGGTCCATGCTTCAAATGCA+AGG - tig0015854:27306-27325 None:intergenic 45.0%
! AAAGAGCACACCTCCAATGT+AGG - tig0015854:27419-27438 None:intergenic 45.0%
CAAAGCAAAGGTGAGGTGGT+TGG + tig0015854:22828-22847 Msa1356680:five_prime_UTR 50.0%
! GGTGGTTGGTTAATGTGACG+CGG + tig0015854:22842-22861 Msa1356680:five_prime_UTR 50.0%
! GTGGTTGGTTAATGTGACGC+GGG + tig0015854:22843-22862 Msa1356680:five_prime_UTR 50.0%
CAGAAGAAAATCCTCTCCCC+CGG + tig0015854:22927-22946 Msa1356680:five_prime_UTR 50.0%
!! ATTCCTTCTTCTTTGGGGCC+GGG - tig0015854:22948-22967 None:intergenic 50.0%
AGATTGCAGAGAAGAGGAGG+AGG - tig0015854:23084-23103 None:intergenic 50.0%
GATGTCGGTGACTTAAGCAC+AGG + tig0015854:23448-23467 Msa1356680:CDS 50.0%
AAAATGAAGGGGGGAAGCTG+TGG + tig0015854:24154-24173 Msa1356680:intron 50.0%
TTGACGAACTCTTGCCGTTC+AGG + tig0015854:24707-24726 Msa1356680:CDS 50.0%
AACATGAAAAGGGCCCAACC+GGG + tig0015854:24784-24803 Msa1356680:intron 50.0%
ACTGCAGATCAAGAGGTCAC+CGG - tig0015854:24816-24835 None:intergenic 50.0%
CGCGGTAGTATTAGGTCACT+AGG + tig0015854:25380-25399 Msa1356680:intron 50.0%
GGTCACTAGGATTGAGCTAG+TGG + tig0015854:25393-25412 Msa1356680:intron 50.0%
! ACTAGATGAGGCATCCAGCA+GGG - tig0015854:25597-25616 None:intergenic 50.0%
CAGAAACTGCTAACTCTGCC+TGG - tig0015854:25776-25795 None:intergenic 50.0%
!! GATTTTTCTGGAGACGGTGC+TGG + tig0015854:25795-25814 Msa1356680:CDS 50.0%
GATCCAGCTATGACTCCCAA+GGG - tig0015854:26255-26274 None:intergenic 50.0%
TGATCCAGCTATGACTCCCA+AGG - tig0015854:26256-26275 None:intergenic 50.0%
ATGCAGATAGCCGTACTTGG+TGG + tig0015854:26747-26766 Msa1356680:intron 50.0%
GCGCAACATGTTAGATGCTC+CGG + tig0015854:27120-27139 Msa1356680:intron 50.0%
TGTGAAGTCTCCCTGTTGGT+TGG + tig0015854:27191-27210 Msa1356680:intron 50.0%
! GTGAAGTCTCCCTGTTGGTT+GGG + tig0015854:27192-27211 Msa1356680:intron 50.0%
! TGAAGTCTCCCTGTTGGTTG+GGG + tig0015854:27193-27212 Msa1356680:intron 50.0%
CTGTTGCTGTAGCCTGTATG+AGG - tig0015854:27356-27375 None:intergenic 50.0%
GCTCTTTCTCGTCTTTGCTG+CGG + tig0015854:27432-27451 Msa1356680:CDS 50.0%
!! TTCCTTCTTCTTTGGGGCCG+GGG - tig0015854:22947-22966 None:intergenic 55.0%
TTGCAGAGAAGAGGAGGAGG+AGG - tig0015854:23081-23100 None:intergenic 55.0%
CTCAAGGGTCCATAGCTCAG+TGG - tig0015854:24850-24869 None:intergenic 55.0%
! CACTAGATGAGGCATCCAGC+AGG - tig0015854:25598-25617 None:intergenic 55.0%
GGGTGAAGAAGCTGCTGCAA+GGG - tig0015854:26235-26254 None:intergenic 55.0%
AGGGTGAAGAAGCTGCTGCA+AGG - tig0015854:26236-26255 None:intergenic 55.0%
TGCAGCAGCTTCTTCACCCT+TGG + tig0015854:26236-26255 Msa1356680:CDS 55.0%
GCAGCAGCTTCTTCACCCTT+GGG + tig0015854:26237-26256 Msa1356680:CDS 55.0%
TCACCCTTGGGAGTCATAGC+TGG + tig0015854:26249-26268 Msa1356680:CDS 55.0%
GGGAGTCATAGCTGGATCAC+TGG + tig0015854:26257-26276 Msa1356680:CDS 55.0%
GTCATAGCTGGATCACTGGC+TGG + tig0015854:26261-26280 Msa1356680:CDS 55.0%
!! TCCTTCTTCTTTGGGGCCGG+GGG - tig0015854:22946-22965 None:intergenic 60.0%
!! TCACCGGTTCGAACCCGGTT+GGG - tig0015854:24800-24819 None:intergenic 60.0%
!! AGAGGTCACCGGTTCGAACC+CGG - tig0015854:24805-24824 None:intergenic 60.0%
! GCTGGATCACTGGCTGGTCA+TGG + tig0015854:26267-26286 Msa1356680:CDS 60.0%
TCCCCCGGCCCCAAAGAAGA+AGG + tig0015854:22942-22961 Msa1356680:five_prime_UTR 65.0%
!! GTCACCGGTTCGAACCCGGT+TGG - tig0015854:24801-24820 None:intergenic 65.0%
CTTCGGGGTCTCTACCCTGC+TGG + tig0015854:25580-25599 Msa1356680:CDS 65.0%
!! CTTCTTTGGGGCCGGGGGAG+AGG - tig0015854:22941-22960 None:intergenic 70.0%
GGGCCCAACCGGGTTCGAAC+CGG + tig0015854:24794-24813 Msa1356680:intron 70.0%
Chromosome Type Strat End Strand Name
tig0015854 gene 22817 27608 22817 ID=Msa1356680;Name=Msa1356680
tig0015854 mRNA 22817 27608 22817 ID=Msa1356680-mRNA-1;Parent=Msa1356680;Name=Msa1356680-mRNA-1;_AED=0.14;_eAED=0.14;_QI=156|1|1|1|0.90|0.83|12|103|354
tig0015854 exon 22817 23152 22817 ID=Msa1356680-mRNA-1:exon:10071;Parent=Msa1356680-mRNA-1
tig0015854 exon 23229 23480 23229 ID=Msa1356680-mRNA-1:exon:10072;Parent=Msa1356680-mRNA-1
tig0015854 exon 23942 23995 23942 ID=Msa1356680-mRNA-1:exon:10073;Parent=Msa1356680-mRNA-1
tig0015854 exon 24213 24274 24213 ID=Msa1356680-mRNA-1:exon:10074;Parent=Msa1356680-mRNA-1
tig0015854 exon 24660 24728 24660 ID=Msa1356680-mRNA-1:exon:10075;Parent=Msa1356680-mRNA-1
tig0015854 exon 25301 25352 25301 ID=Msa1356680-mRNA-1:exon:10076;Parent=Msa1356680-mRNA-1
tig0015854 exon 25575 25649 25575 ID=Msa1356680-mRNA-1:exon:10077;Parent=Msa1356680-mRNA-1
tig0015854 exon 25777 25906 25777 ID=Msa1356680-mRNA-1:exon:10078;Parent=Msa1356680-mRNA-1
tig0015854 exon 26232 26302 26232 ID=Msa1356680-mRNA-1:exon:10079;Parent=Msa1356680-mRNA-1
tig0015854 exon 26753 26800 26753 ID=Msa1356680-mRNA-1:exon:10080;Parent=Msa1356680-mRNA-1
tig0015854 exon 27409 27538 27409 ID=Msa1356680-mRNA-1:exon:10081;Parent=Msa1356680-mRNA-1
tig0015854 exon 27564 27608 27564 ID=Msa1356680-mRNA-1:exon:10082;Parent=Msa1356680-mRNA-1
tig0015854 five_prime_UTR 22817 22972 22817 ID=Msa1356680-mRNA-1:five_prime_utr;Parent=Msa1356680-mRNA-1
tig0015854 CDS 22973 23152 22973 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 23229 23480 23229 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 23942 23995 23942 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 24213 24274 24213 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 24660 24728 24660 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 25301 25352 25301 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 25575 25649 25575 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 25777 25906 25777 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 26232 26302 26232 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 26753 26800 26753 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 CDS 27409 27480 27409 ID=Msa1356680-mRNA-1:cds;Parent=Msa1356680-mRNA-1
tig0015854 three_prime_UTR 27481 27538 27481 ID=Msa1356680-mRNA-1:three_prime_utr;Parent=Msa1356680-mRNA-1
tig0015854 three_prime_UTR 27564 27608 27564 ID=Msa1356680-mRNA-1:three_prime_utr;Parent=Msa1356680-mRNA-1
Gene Sequence

>Msa1356680

ATGCAATCACACTTACGCTCACATTCACTCTCTTCGTTTCCAAAACCATTTAAGAGCCACCACTTTTCATCTTTCACCACCTCACTTATATCCTCTTCCATTTTTCCTCCTCCTCCTCTTCTCTGCAATCTCAAATTACCACCACGCTTTCAATTCACCAACATTTTTCGGGCTACAACGGGATTTGTTCGTGCTTCCGATCATGACTCTGTTGCCGAAAATACCGATTCTCAATGCCAATTGGCAACACAGAATGTGTCTTCTGATGATACTGATGATGGATCAATAGCACTTGTGAAGTTTATGCTGTTCTCCGCGTTCTTCGCACTTCAACATACTTATCCGGCAGTTGCTGCTTCTGATTTTGCTACTGGTTTGAATTCAATTCCTATATTTGGAGATGTCGGTGACTTAAGCACAGGTTTTGCTTCAGCATTTTTGCTGATATTTTTCTCTGAACTGGGAGACAAGACTTTTTTCATTGCAGCATTGTTAGCAGCTAGAAATTCAGCTGGTGTTGTTTTCGTTGGGACATTTGGCGCACTTGCGGCAATGACTGTCATATCTGTCGCTCTAGGTCGAACTTTTCATTATGTTGACGAACTCTTGCCGTTCAGGTTTGGAGAAACTGATCTACCTATTGATGATATTGCTGCTGTTTGCCTATTGGTGTACTTCGGGGTCTCTACCCTGCTGGATGCCTCATCTAGTGATAGCCAAAAATCAGATGATGAACAGAAGGAGGCAGAGTTAGCAGTTTCTGATTTTTCTGGAGACGGTGCTGGGATACTAGCTGCTGCCAGCACAATTGTCAGCACTTTTCTCTTAGTTTTTGTTGCTGAGTGGGGTGATAAATCATTTTTCTCCACAATTGCCCTTGCAGCAGCTTCTTCACCCTTGGGAGTCATAGCTGGATCACTGGCTGGTCATGGTGTTGCAACTTTGATAGCCGTACTTGGTGGCTCTTTACTAGGGACATTTTTGTCGGAGAAGGTTATTGCCTACATTGGAGGTGTGCTCTTTCTCGTCTTTGCTGCGGTAACCGTATTTGAAATTGTACAATAG

Protein sequence

>Msa1356680

MQSHLRSHSLSSFPKPFKSHHFSSFTTSLISSSIFPPPPLLCNLKLPPRFQFTNIFRATTGFVRASDHDSVAENTDSQCQLATQNVSSDDTDDGSIALVKFMLFSAFFALQHTYPAVAASDFATGLNSIPIFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFVGTFGALAAMTVISVALGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAELAVSDFSGDGAGILAAASTIVSTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGSLAGHGVATLIAVLGGSLLGTFLSEKVIAYIGGVLFLVFAAVTVFEIVQ*