AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0791430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0791430 MtrunA17_Chr2g0291061 96.943 229 4 2 1 229 1 226 9.23e-165 453
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0791430 AT3G52155.1 67.598 179 56 1 51 229 38 214 1.61e-85 253
Msa0791430 AT3G52155.3 67.598 179 56 1 51 229 38 214 1.61e-85 253
Msa0791430 AT3G52155.2 69.182 159 47 1 51 209 38 194 1.06e-75 227
Msa0791430 AT3G52155.4 65.806 155 51 1 75 229 13 165 1.41e-72 218

Find 106 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTGGTGGGTGGAAGCTTC+AGG 0.157844 5_3:+2391484 Msa0791430:CDS
TTGGCGCGTAATCTGAAATT+AGG 0.161940 5_3:-2387919 None:intergenic
AACGCCACAAAATCTGAAAT+TGG 0.165377 5_3:+2387811 Msa0791430:five_prime_UTR
CAATCAGATTCTGTTTAATT+TGG 0.217235 5_3:+2391709 Msa0791430:three_prime_UTR
CATGTTGGCCCAACCCATTC+AGG 0.251434 5_3:-2392003 None:intergenic
GGGAATGAGGATTGAGGATT+TGG 0.289186 5_3:-2387938 None:intergenic
TTTAGCTTGGTGTCTTGTTT+GGG 0.296413 5_3:-2387958 None:intergenic
TTCGCCATGCCGAAAGTTCC+TGG 0.311015 5_3:+2388022 Msa0791430:CDS
TGAAATGAGTGTCGACATAA+TGG 0.337985 5_3:+2387737 None:intergenic
TGGCGCGTAATCTGAAATTA+GGG 0.377016 5_3:-2387918 None:intergenic
GGAAGAAAAGAAAGATGAAA+TGG 0.392144 5_3:-2391955 None:intergenic
ACAGGTGCATGGGACACAAC+AGG 0.393604 5_3:+2390048 Msa0791430:intron
AACCCAACTGTTGGAGTTTG+AGG 0.406944 5_3:-2389160 None:intergenic
CATTGCTGAGAGTAAATTGT+TGG 0.408833 5_3:+2391769 Msa0791430:three_prime_UTR
GACCGGCCTCTGAGTAAGTC+AGG 0.413658 5_3:+2389113 Msa0791430:CDS
CTGACCAAACTGATGCGGTT+TGG 0.415237 5_3:-2391614 None:intergenic
TTTGGTGGGTGGAAGCTTCA+GGG 0.416035 5_3:+2391485 Msa0791430:CDS
ATCATCGCCGGAGCAACATT+CGG 0.422099 5_3:+2387893 Msa0791430:CDS
GCATTTGTAGCAGCAGGGTT+TGG 0.423367 5_3:+2391467 Msa0791430:CDS
CTGTTTAATTTGGCAGCAAT+GGG 0.425821 5_3:+2391719 Msa0791430:three_prime_UTR
TTGAAACTGCTGGGAAATCT+TGG 0.430976 5_3:+2390141 Msa0791430:CDS
CAGCGATGCAGCACGGACTA+AGG 0.433131 5_3:+2389288 Msa0791430:intron
ATCTTGACTAGCTAGCTACT+TGG 0.434900 5_3:-2391518 None:intergenic
TGGTGTCTTGTTTGGGAATG+AGG 0.437396 5_3:-2387951 None:intergenic
TTACAGGCATTTGTAGCAGC+AGG 0.439671 5_3:+2391461 Msa0791430:intron
AACTTTCGGCATGGCGAAGA+AGG 0.440447 5_3:-2388017 None:intergenic
GAAATGAGTGTCGACATAAT+GGG 0.443284 5_3:+2387738 None:intergenic
TCTGTTTAATTTGGCAGCAA+TGG 0.443589 5_3:+2391718 Msa0791430:three_prime_UTR
TGCGTTGTGCAGATCATGAC+CGG 0.444184 5_3:+2389096 Msa0791430:intron
ACGCCACAAAATCTGAAATT+GGG 0.444273 5_3:+2387812 Msa0791430:five_prime_UTR
AGGTTATTTGTAAATATTCA+AGG 0.448646 5_3:+2389428 Msa0791430:CDS
GAATCCAAACCGCATCAGTT+TGG 0.456158 5_3:+2391610 Msa0791430:three_prime_UTR
TACCTAGATAGTATAAGTTC+AGG 0.461088 5_3:-2389188 None:intergenic
ACTAGGGAAAGCATACTAGA+TGG 0.463512 5_3:+2391660 Msa0791430:three_prime_UTR
TTTGTAGCAGCAGGGTTTGG+TGG 0.463635 5_3:+2391470 Msa0791430:CDS
GGAACAAGTGCAGGAACTAC+TGG 0.465275 5_3:+2389330 Msa0791430:CDS
TATTCGATTGCAGCCATGGA+TGG 0.469077 5_3:+2389382 Msa0791430:CDS
TTTCTATTCGATTGCAGCCA+TGG 0.471965 5_3:+2389378 Msa0791430:CDS
TTGTAGCAGCAGGGTTTGGT+GGG 0.472254 5_3:+2391471 Msa0791430:CDS
TCCCTCAAACTCCAACAGTT+GGG 0.472793 5_3:+2389158 Msa0791430:CDS
AGGGTGTTCCCAGGAACTTT+CGG 0.477079 5_3:-2388031 None:intergenic
GGCTTTATACCTCGGAGTGA+AGG 0.477571 5_3:-2388051 None:intergenic
GCTGCACTGCTTGAAACTGC+TGG 0.482315 5_3:+2390131 Msa0791430:CDS
ACCCAACTGTTGGAGTTTGA+GGG 0.487056 5_3:-2389159 None:intergenic
TTCCCTCAAACTCCAACAGT+TGG 0.487121 5_3:+2389157 Msa0791430:CDS
TAGCAGCAGGGTTTGGTGGG+TGG 0.487228 5_3:+2391474 Msa0791430:CDS
CAAACCGCATCAGTTTGGTC+AGG 0.494958 5_3:+2391615 Msa0791430:three_prime_UTR
CAGGTGCATGGGACACAACA+GGG 0.496705 5_3:+2390049 Msa0791430:intron
CTTTACATTCTATACTAAGC+AGG 0.501853 5_3:-2391801 None:intergenic
AGATGCTCAAAAGATAAAGT+TGG 0.502518 5_3:+2391566 Msa0791430:three_prime_UTR
GAAAACTGTAATGCCCTGAA+TGG 0.507896 5_3:+2391989 Msa0791430:three_prime_UTR
AAGGATGAGGCGGCGAGAGA+TGG 0.508749 5_3:-2387998 None:intergenic
TCAAACTCCAACAGTTGGGT+TGG 0.510018 5_3:+2389162 Msa0791430:CDS
TGCTGGGAAATCTTGGAATG+AGG 0.511570 5_3:+2390148 Msa0791430:CDS
AAAGCATACTAGATGGAAGA+TGG 0.515770 5_3:+2391667 Msa0791430:three_prime_UTR
CGAGAGATGGAATCTGAGAA+AGG 0.516129 5_3:-2387985 None:intergenic
TTCCTGAACTTATACTATCT+AGG 0.516546 5_3:+2389186 Msa0791430:CDS
ATGTTGGCCCAACCCATTCA+GGG 0.521865 5_3:-2392002 None:intergenic
GGCGATGATTGAGGTGGTGG+TGG 0.532803 5_3:-2387879 None:intergenic
ACAACAACACAAAGCAAACC+AGG 0.533748 5_3:+2387783 Msa0791430:five_prime_UTR
AACCGCAGATCACCTTCAAA+AGG 0.534911 5_3:+2389408 Msa0791430:CDS
TCGCCATGCCGAAAGTTCCT+GGG 0.538733 5_3:+2388023 Msa0791430:CDS
TTGTTTGGGAATGAGGATTG+AGG 0.539065 5_3:-2387944 None:intergenic
TGTAATGCCCTGAATGGGTT+GGG 0.542094 5_3:+2391995 Msa0791430:three_prime_UTR
GGTTATTTGTAAATATTCAA+GGG 0.542148 5_3:+2389429 Msa0791430:CDS
ATTCGATTGCAGCCATGGAT+GGG 0.543191 5_3:+2389383 Msa0791430:CDS
TAGGGTTCCGAATGTTGCTC+CGG 0.545131 5_3:-2387900 None:intergenic
TCCGGCGATGATTGAGGTGG+TGG 0.546028 5_3:-2387882 None:intergenic
GATAATGCAGGAACAAGTGC+AGG 0.547850 5_3:+2389321 Msa0791430:CDS
CGGCATGGCGAAGAAGGATG+AGG 0.548351 5_3:-2388011 None:intergenic
GCTTTATACCTCGGAGTGAA+GGG 0.548651 5_3:-2388050 None:intergenic
TCGGAGTGAAGGGTGTTCCC+AGG 0.556542 5_3:-2388040 None:intergenic
ATCTGCGGTTTGCCCATCCA+TGG 0.557110 5_3:-2389395 None:intergenic
ATTGCTCAGAGCTCATGACT+AGG 0.557619 5_3:+2391643 Msa0791430:three_prime_UTR
CTGCACTGCTTGAAACTGCT+GGG 0.562340 5_3:+2390132 Msa0791430:CDS
TTGGGTGGTCTACAGGTGCA+TGG 0.562923 5_3:+2390037 Msa0791430:intron
GTGGTGGAAAGGTGAATTGA+CGG 0.563324 5_3:-2387863 None:intergenic
AAAACTGTAATGCCCTGAAT+GGG 0.564567 5_3:+2391990 Msa0791430:three_prime_UTR
ACCACCACCTCAATCATCGC+CGG 0.572284 5_3:+2387881 Msa0791430:CDS
CAGGAATCCAACCCAACTGT+TGG 0.577443 5_3:-2389169 None:intergenic
AAATGAGTGTCGACATAATG+GGG 0.577838 5_3:+2387739 None:intergenic
TCCCTGACTTACTCAGAGGC+CGG 0.580646 5_3:-2389115 None:intergenic
GGAGACACTCAAGATAATGC+AGG 0.584126 5_3:+2389309 Msa0791430:CDS
TGGGTGGTCTACAGGTGCAT+GGG 0.587485 5_3:+2390038 Msa0791430:intron
TGTTGCTCCGGCGATGATTG+AGG 0.595491 5_3:-2387888 None:intergenic
GCCTCTGAGTAAGTCAGGGA+AGG 0.597075 5_3:+2389118 Msa0791430:CDS
TACAGGCATTTGTAGCAGCA+GGG 0.598227 5_3:+2391462 Msa0791430:intron
TGATTGAGGTGGTGGTGGAA+AGG 0.598567 5_3:-2387874 None:intergenic
TTGCTCAGAGCTCATGACTA+GGG 0.604327 5_3:+2391644 Msa0791430:three_prime_UTR
GTTCCCAGGAACTTTCGGCA+TGG 0.607984 5_3:-2388026 None:intergenic
AAACCGCATCAGTTTGGTCA+GGG 0.611343 5_3:+2391616 Msa0791430:three_prime_UTR
CTGTAATGCCCTGAATGGGT+TGG 0.611931 5_3:+2391994 Msa0791430:three_prime_UTR
CTTGCGACAGCGATGCAGCA+CGG 0.627397 5_3:+2389281 Msa0791430:intron
ACCGGCCTCTGAGTAAGTCA+GGG 0.632716 5_3:+2389114 Msa0791430:CDS
TCCTTCCCTGACTTACTCAG+AGG 0.643499 5_3:-2389119 None:intergenic
CAACAACACAAAGCAAACCA+GGG 0.652099 5_3:+2387784 Msa0791430:five_prime_UTR
GGTGCATGGGACACAACAGG+GGG 0.655496 5_3:+2390051 Msa0791430:intron
AGGTGCATGGGACACAACAG+GGG 0.655761 5_3:+2390050 Msa0791430:intron
CATGGCGAAGAAGGATGAGG+CGG 0.664817 5_3:-2388008 None:intergenic
ACGCCCTGACCAAACTGATG+CGG 0.673309 5_3:-2391619 None:intergenic
TGGGAACACCCTTCACTCCG+AGG 0.676993 5_3:+2388042 Msa0791430:CDS
TGAATTGACGGTGCTGCATG+TGG 0.678087 5_3:-2387851 None:intergenic
ACTAGAAACAAAATGAACCT+CGG 0.684849 5_3:-2389356 None:intergenic
GCAGGAACTACTGGACGCCG+AGG 0.701768 5_3:+2389339 Msa0791430:CDS
TGCTCCGGCGATGATTGAGG+TGG 0.724852 5_3:-2387885 None:intergenic
AATGAGTGTCGACATAATGG+GGG 0.732885 5_3:+2387740 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAACTTCTAATTAT+AGG + chr5_3:2390351-2390370 Msa0791430:intron 10.0%
!! CAAAAATAAATTTATAATCT+CGG - chr5_3:2390395-2390414 None:intergenic 10.0%
!! TAAAATATTAATCAATCAAA+AGG - chr5_3:2391323-2391342 None:intergenic 10.0%
!!! TTTGATTGATTAATATTTTA+AGG + chr5_3:2391323-2391342 Msa0791430:intron 10.0%
!!! TTGATTGATTAATATTTTAA+GGG + chr5_3:2391324-2391343 Msa0791430:intron 10.0%
!! AAGATAAAATAATGTCAAAT+TGG - chr5_3:2388898-2388917 None:intergenic 15.0%
!! AAACATAAACATTATTAACA+CGG - chr5_3:2389002-2389021 None:intergenic 15.0%
!!! AAAAGCACAAAAAAAATAAA+TGG - chr5_3:2389727-2389746 None:intergenic 15.0%
!! ATTACATTAATAAGATTTGA+TGG + chr5_3:2390004-2390023 Msa0791430:intron 15.0%
!!! CGAGATTATAAATTTATTTT+TGG + chr5_3:2390393-2390412 Msa0791430:intron 15.0%
!! AAAGATGATAAAATGATAAT+AGG + chr5_3:2390667-2390686 Msa0791430:intron 15.0%
!!! ATTCTTATTGATTAATGAAT+TGG + chr5_3:2390853-2390872 Msa0791430:intron 15.0%
!!! TGATTGATTAATATTTTAAG+GGG + chr5_3:2391325-2391344 Msa0791430:intron 15.0%
!! CTTTAATTCCAAAAAATGAA+GGG - chr5_3:2388075-2388094 None:intergenic 20.0%
!! ACTTTAATTCCAAAAAATGA+AGG - chr5_3:2388076-2388095 None:intergenic 20.0%
!! GTTTCAAACTTTATTCAATT+AGG + chr5_3:2388094-2388113 Msa0791430:intron 20.0%
!! AAGAAAAAATAAAGTCAAAC+TGG - chr5_3:2388398-2388417 None:intergenic 20.0%
!! TTGAAATGAAAATGTTTGTT+TGG + chr5_3:2388549-2388568 Msa0791430:intron 20.0%
!! AACATAAACATTATTAACAC+GGG - chr5_3:2389001-2389020 None:intergenic 20.0%
!! ATGAAAATGTATTGTTTGTT+TGG + chr5_3:2389039-2389058 Msa0791430:intron 20.0%
!!! ATTTACAAATAACCTTTTGA+AGG - chr5_3:2389423-2389442 None:intergenic 20.0%
!! AGGTTATTTGTAAATATTCA+AGG + chr5_3:2389428-2389447 Msa0791430:CDS 20.0%
!! GGTTATTTGTAAATATTCAA+GGG + chr5_3:2389429-2389448 Msa0791430:CDS 20.0%
!! AATTTAGAAACCAACATAAA+AGG - chr5_3:2389499-2389518 None:intergenic 20.0%
!! TCTTTATTATCTTTGTATGA+AGG + chr5_3:2389518-2389537 Msa0791430:intron 20.0%
!! ATTGTTGGAAAAAGAATAAA+GGG - chr5_3:2389951-2389970 None:intergenic 20.0%
!! TATTGTTGGAAAAAGAATAA+AGG - chr5_3:2389952-2389971 None:intergenic 20.0%
!! AGCAAATAAAAAGATATTGT+TGG - chr5_3:2389966-2389985 None:intergenic 20.0%
!!! ATTTGATGGATATTTGATAT+TGG + chr5_3:2390018-2390037 Msa0791430:intron 20.0%
!!! TTTGATGGATATTTGATATT+GGG + chr5_3:2390019-2390038 Msa0791430:intron 20.0%
!!! TATTTTTGGAATGTTTTTTG+TGG + chr5_3:2390407-2390426 Msa0791430:intron 20.0%
!! TGATTAATGAATTGGAAAAT+TGG + chr5_3:2390861-2390880 Msa0791430:intron 20.0%
!! TTCCATCATAAATGTTATAA+TGG + chr5_3:2390898-2390917 Msa0791430:intron 20.0%
!! AACCATTATAACATTTATGA+TGG - chr5_3:2390903-2390922 None:intergenic 20.0%
!! CATAAATGTTATAATGGTTT+AGG + chr5_3:2390904-2390923 Msa0791430:intron 20.0%
!!! CACTAATAAGGTTTTATTTT+AGG - chr5_3:2391150-2391169 None:intergenic 20.0%
!! TCAAATCTTATTATCATGAT+AGG - chr5_3:2391274-2391293 None:intergenic 20.0%
! TTTCCACTAAATTCCTTAAA+CGG - chr5_3:2388127-2388146 None:intergenic 25.0%
! AATTGAAACTGCTTATGTTA+TGG + chr5_3:2388145-2388164 Msa0791430:intron 25.0%
!!! TTTTGTGCTATTTTGAATGT+AGG + chr5_3:2388205-2388224 Msa0791430:intron 25.0%
!!! TTTGTGCTATTTTGAATGTA+GGG + chr5_3:2388206-2388225 Msa0791430:intron 25.0%
!! AATAAGTTGAAAACAGCTTA+TGG - chr5_3:2388323-2388342 None:intergenic 25.0%
! ATTAAGCTGTTTATCCAAAT+AGG + chr5_3:2388466-2388485 Msa0791430:intron 25.0%
!!! AAATGTTTGTTTGGTGTAAA+TGG + chr5_3:2388558-2388577 Msa0791430:intron 25.0%
! AATTGAAACACGTTATGTTA+TGG + chr5_3:2388648-2388667 Msa0791430:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr5_3:2388951-2388970 Msa0791430:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr5_3:2388952-2388971 Msa0791430:intron 25.0%
!!! TATTGTTTGTTTGGTGTAAA+TGG + chr5_3:2389048-2389067 Msa0791430:intron 25.0%
! TTATTATCTTTGTATGAAGG+TGG + chr5_3:2389521-2389540 Msa0791430:intron 25.0%
!!! ACATTGTTTTGTTTTTCCAT+AGG - chr5_3:2389592-2389611 None:intergenic 25.0%
! TATGGAAAAACAAAACAATG+TGG + chr5_3:2389591-2389610 Msa0791430:intron 25.0%
!!! GATGTTGATTCATTAAGTAT+AGG - chr5_3:2389900-2389919 None:intergenic 25.0%
! CGTAAAGAACTATTTAAATC+AGG - chr5_3:2389926-2389945 None:intergenic 25.0%
!! CTTCATAAAAGTATAAACTG+AGG - chr5_3:2390263-2390282 None:intergenic 25.0%
! TTAGAATGTTCAAGGTTTAT+GGG - chr5_3:2390606-2390625 None:intergenic 25.0%
! ATTGTGATGTATGAAATTTG+AGG - chr5_3:2390633-2390652 None:intergenic 25.0%
! CAAATTTCATACATCACAAT+TGG + chr5_3:2390633-2390652 Msa0791430:intron 25.0%
! AAGTTGAAACAGTTATGTAT+AGG - chr5_3:2390775-2390794 None:intergenic 25.0%
!! ACATAACTGTTTCAACTTTT+AGG + chr5_3:2390777-2390796 Msa0791430:intron 25.0%
! AAAAATATTAGAAACCGTGA+AGG - chr5_3:2390812-2390831 None:intergenic 25.0%
!!! CGGTTTCTAATATTTTTACA+TGG + chr5_3:2390815-2390834 Msa0791430:intron 25.0%
! GCTTAAAAGGTAAAATATCA+AGG - chr5_3:2391128-2391147 None:intergenic 25.0%
!!! GGTTTTATTTTAGGCTTAAA+AGG - chr5_3:2391141-2391160 None:intergenic 25.0%
! TAAAACCTTATTAGTGTAAC+TGG + chr5_3:2391154-2391173 Msa0791430:intron 25.0%
! ATATTATGTAAGCTTCCAAA+AGG + chr5_3:2391387-2391406 Msa0791430:intron 25.0%
!! AAATCGAATACTTTTCCTTT+TGG - chr5_3:2391405-2391424 None:intergenic 25.0%
!!! TTAGATACACAACTTTTTCT+CGG - chr5_3:2391432-2391451 None:intergenic 25.0%
!! TATTAGCAAGATTTTCAGTA+TGG - chr5_3:2391547-2391566 None:intergenic 25.0%
! CAATCAGATTCTGTTTAATT+TGG + chr5_3:2391709-2391728 Msa0791430:three_prime_UTR 25.0%
!! CATTACAGTTTTCATAATCA+AGG - chr5_3:2391982-2392001 None:intergenic 25.0%
! ATACCCAATTTCAGATTTTG+TGG - chr5_3:2387818-2387837 None:intergenic 30.0%
!!! GTATAAAGCCCTTCATTTTT+TGG + chr5_3:2388064-2388083 Msa0791430:intron 30.0%
TTCCACTAAATTCCTTAAAC+GGG - chr5_3:2388126-2388145 None:intergenic 30.0%
TTCTGGATAAAACAGATACT+GGG + chr5_3:2388175-2388194 Msa0791430:intron 30.0%
! TTTTGAATGTAGGGTCTATT+TGG + chr5_3:2388215-2388234 Msa0791430:intron 30.0%
ATAACATGAGTGAGTGTTAA+AGG - chr5_3:2388500-2388519 None:intergenic 30.0%
TTCTACGTAAAACAAGTAGT+GGG + chr5_3:2388678-2388697 Msa0791430:intron 30.0%
!! TGACTAATTTTGAGAGCTAA+TGG + chr5_3:2388777-2388796 Msa0791430:intron 30.0%
AATAAGCTCAAAACAGCTTA+TGG - chr5_3:2388821-2388840 None:intergenic 30.0%
TAATACTTTATGACCCTGTT+TGG - chr5_3:2388968-2388987 None:intergenic 30.0%
TTCCTGAACTTATACTATCT+AGG + chr5_3:2389186-2389205 Msa0791430:CDS 30.0%
TACCTAGATAGTATAAGTTC+AGG - chr5_3:2389191-2389210 None:intergenic 30.0%
TGAACTTATACTATCTAGGT+AGG + chr5_3:2389190-2389209 Msa0791430:intron 30.0%
GAACTTATACTATCTAGGTA+GGG + chr5_3:2389191-2389210 Msa0791430:intron 30.0%
ACTAGAAACAAAATGAACCT+CGG - chr5_3:2389359-2389378 None:intergenic 30.0%
!! TTTTGTCTAGCCTTTTATGT+TGG + chr5_3:2389486-2389505 Msa0791430:intron 30.0%
! TGTTTTTCCATAGGTTGTTT+GGG - chr5_3:2389583-2389602 None:intergenic 30.0%
!! TTGTTTTTCCATAGGTTGTT+TGG - chr5_3:2389584-2389603 None:intergenic 30.0%
ATAATGCTATATTTGCAGAG+TGG + chr5_3:2389636-2389655 Msa0791430:intron 30.0%
GGTCAAATATGGAAATTTAG+TGG + chr5_3:2389690-2389709 Msa0791430:intron 30.0%
! CTCTAAAAGTTCAAAACAGA+TGG - chr5_3:2389756-2389775 None:intergenic 30.0%
!! CATCTGTTTTGAACTTTTAG+AGG + chr5_3:2389754-2389773 Msa0791430:intron 30.0%
! TTTTCAACCTTTCAACACTA+TGG + chr5_3:2389782-2389801 Msa0791430:intron 30.0%
!!! GATTCAACCAATTTTGAGTT+GGG - chr5_3:2389815-2389834 None:intergenic 30.0%
!! AGATTCAACCAATTTTGAGT+TGG - chr5_3:2389816-2389835 None:intergenic 30.0%
AAGAACTATTTAAATCAGGC+TGG - chr5_3:2389922-2389941 None:intergenic 30.0%
TTAATGTACACAATTGTGCA+AGG - chr5_3:2390187-2390206 None:intergenic 30.0%
! TGCATTTATTGTGTCTTTTG+TGG + chr5_3:2390221-2390240 Msa0791430:intron 30.0%
!!! GTGTATTCTTGTTCCTTTTT+TGG + chr5_3:2390509-2390528 Msa0791430:intron 30.0%
AGTCAACCAATATTTACCAT+TGG + chr5_3:2390536-2390555 Msa0791430:intron 30.0%
GTCAACCAATATTTACCATT+GGG + chr5_3:2390537-2390556 Msa0791430:intron 30.0%
TCAACCAATATTTACCATTG+GGG + chr5_3:2390538-2390557 Msa0791430:intron 30.0%
GTTAGAATGTTCAAGGTTTA+TGG - chr5_3:2390607-2390626 None:intergenic 30.0%
AGTTATGTATAGGTCATGAA+TGG - chr5_3:2390765-2390784 None:intergenic 30.0%
AGTTCCAGTAACTTCAATTA+CGG + chr5_3:2391028-2391047 Msa0791430:intron 30.0%
AAGGTAAAATATCAAGGCTT+GGG - chr5_3:2391122-2391141 None:intergenic 30.0%
AAAGGTAAAATATCAAGGCT+TGG - chr5_3:2391123-2391142 None:intergenic 30.0%
AAGTTCCAGTTACACTAATA+AGG - chr5_3:2391162-2391181 None:intergenic 30.0%
TCTCATTGATATCCTTTCTT+GGG - chr5_3:2391216-2391235 None:intergenic 30.0%
ATCTCATTGATATCCTTTCT+TGG - chr5_3:2391217-2391236 None:intergenic 30.0%
TATCTAACATTGCATCTTAC+AGG + chr5_3:2391445-2391464 Msa0791430:intron 30.0%
AGATGCTCAAAAGATAAAGT+TGG + chr5_3:2391566-2391585 Msa0791430:three_prime_UTR 30.0%
!! GAAGCATCATTGCTTATTTT+AGG + chr5_3:2391588-2391607 Msa0791430:three_prime_UTR 30.0%
CTTTACATTCTATACTAAGC+AGG - chr5_3:2391804-2391823 None:intergenic 30.0%
GGAAGAAAAGAAAGATGAAA+TGG - chr5_3:2391958-2391977 None:intergenic 30.0%
! TACAGTTTTCATAATCAAGG+TGG - chr5_3:2391979-2391998 None:intergenic 30.0%
! AACGCCACAAAATCTGAAAT+TGG + chr5_3:2387811-2387830 Msa0791430:five_prime_UTR 35.0%
! ACGCCACAAAATCTGAAATT+GGG + chr5_3:2387812-2387831 Msa0791430:five_prime_UTR 35.0%
!! TTTAGCTTGGTGTCTTGTTT+GGG - chr5_3:2387961-2387980 None:intergenic 35.0%
!!! TTTTAGCTTGGTGTCTTGTT+TGG - chr5_3:2387962-2387981 None:intergenic 35.0%
! AAATGAAGGGCTTTATACCT+CGG - chr5_3:2388062-2388081 None:intergenic 35.0%
TTCCCGTTTAAGGAATTTAG+TGG + chr5_3:2388121-2388140 Msa0791430:intron 35.0%
!! TATGTTATGGCTTCTAGTTC+TGG + chr5_3:2388158-2388177 Msa0791430:intron 35.0%
! GTTCTGGATAAAACAGATAC+TGG + chr5_3:2388174-2388193 Msa0791430:intron 35.0%
AAGCACTTGTATGAGTGTTT+AGG + chr5_3:2388268-2388287 Msa0791430:intron 35.0%
AGCACTTGTATGAGTGTTTA+GGG + chr5_3:2388269-2388288 Msa0791430:intron 35.0%
AAGCTAACACAGAGAACTTA+TGG - chr5_3:2388347-2388366 None:intergenic 35.0%
ATGAGTGAGTGTTAAAGGTT+GGG - chr5_3:2388495-2388514 None:intergenic 35.0%
!! TGTTTGTTTGGTGTAAATGG+AGG + chr5_3:2388561-2388580 Msa0791430:intron 35.0%
GTGTCAAACTCTATTCAACT+TGG + chr5_3:2388596-2388615 Msa0791430:intron 35.0%
CTATTCAACTTGGAATGTTC+TGG + chr5_3:2388606-2388625 Msa0791430:intron 35.0%
!! ACTTGGAATGTTCTGGTTTA+AGG + chr5_3:2388613-2388632 Msa0791430:intron 35.0%
GTTCTACGTAAAACAAGTAG+TGG + chr5_3:2388677-2388696 Msa0791430:intron 35.0%
!! CTTTGTGCTATTTCAAGTGT+AGG + chr5_3:2388708-2388727 Msa0791430:intron 35.0%
!! TGTTTGTTTGGTGTAAATGG+AGG + chr5_3:2388561-2388580 Msa0791430:intron 35.0%
TTATCTTTGTATGAAGGTGG+AGG + chr5_3:2389524-2389543 Msa0791430:intron 35.0%
ACTGAGAAATCAGATGGTAA+AGG + chr5_3:2389669-2389688 Msa0791430:intron 35.0%
CAGATGGTAAAGGTCAAATA+TGG + chr5_3:2389679-2389698 Msa0791430:intron 35.0%
! TTTCAGTCCATAGTGTTGAA+AGG - chr5_3:2389792-2389811 None:intergenic 35.0%
ACTGAAACCCAACTCAAAAT+TGG + chr5_3:2389805-2389824 Msa0791430:intron 35.0%
GAAGAACATCCAATGTTTGT+AGG + chr5_3:2389841-2389860 Msa0791430:intron 35.0%
GATGGATATTTGATATTGGG+TGG + chr5_3:2390022-2390041 Msa0791430:intron 35.0%
AAGATCGCACAGAAATTGTA+TGG + chr5_3:2390299-2390318 Msa0791430:intron 35.0%
AGATCGCACAGAAATTGTAT+GGG + chr5_3:2390300-2390319 Msa0791430:intron 35.0%
TTTGTGGAACATGTGTTTGA+AGG + chr5_3:2390423-2390442 Msa0791430:intron 35.0%
TTGTGGAACATGTGTTTGAA+GGG + chr5_3:2390424-2390443 Msa0791430:intron 35.0%
!! ACTCCTAACACAGTTTTGTA+GGG - chr5_3:2390487-2390506 None:intergenic 35.0%
ACATCCCCAATGGTAAATAT+TGG - chr5_3:2390545-2390564 None:intergenic 35.0%
GAGGTAAGTTAGAATGTTCA+AGG - chr5_3:2390614-2390633 None:intergenic 35.0%
CATGTGGGTACTAACAAATA+GGG - chr5_3:2390961-2390980 None:intergenic 35.0%
ACATGTGGGTACTAACAAAT+AGG - chr5_3:2390962-2390981 None:intergenic 35.0%
CTTGGGGACTAATCATATAA+GGG - chr5_3:2391105-2391124 None:intergenic 35.0%
AGGTAAAATATCAAGGCTTG+GGG - chr5_3:2391121-2391140 None:intergenic 35.0%
AAACCAGTAGCTATTATGCT+TGG + chr5_3:2391183-2391202 Msa0791430:intron 35.0%
CTCATTGATATCCTTTCTTG+GGG - chr5_3:2391215-2391234 None:intergenic 35.0%
AAAGCATACTAGATGGAAGA+TGG + chr5_3:2391667-2391686 Msa0791430:three_prime_UTR 35.0%
!! TCTGTTTAATTTGGCAGCAA+TGG + chr5_3:2391718-2391737 Msa0791430:three_prime_UTR 35.0%
!! CTGTTTAATTTGGCAGCAAT+GGG + chr5_3:2391719-2391738 Msa0791430:three_prime_UTR 35.0%
CATTGCTGAGAGTAAATTGT+TGG + chr5_3:2391769-2391788 Msa0791430:three_prime_UTR 35.0%
AAAACTGTAATGCCCTGAAT+GGG + chr5_3:2391990-2392009 Msa0791430:three_prime_UTR 35.0%
ACAACAACACAAAGCAAACC+AGG + chr5_3:2387783-2387802 Msa0791430:five_prime_UTR 40.0%
CAACAACACAAAGCAAACCA+GGG + chr5_3:2387784-2387803 Msa0791430:five_prime_UTR 40.0%
! ATTTTGTGGCGTTAAATCCC+TGG - chr5_3:2387804-2387823 None:intergenic 40.0%
! TGGCGCGTAATCTGAAATTA+GGG - chr5_3:2387921-2387940 None:intergenic 40.0%
! TTGGCGCGTAATCTGAAATT+AGG - chr5_3:2387922-2387941 None:intergenic 40.0%
TTGTTTGGGAATGAGGATTG+AGG - chr5_3:2387947-2387966 None:intergenic 40.0%
!! TGAGAAAGGCTCTTTTAGCT+TGG - chr5_3:2387974-2387993 None:intergenic 40.0%
ATTAGGAACGTTCCCGTTTA+AGG + chr5_3:2388111-2388130 Msa0791430:intron 40.0%
GCACTTGTATGAGTGTTTAG+GGG + chr5_3:2388270-2388289 Msa0791430:intron 40.0%
TAAAGGTTGGGACTCCTATT+TGG - chr5_3:2388483-2388502 None:intergenic 40.0%
CATGAGTGAGTGTTAAAGGT+TGG - chr5_3:2388496-2388515 None:intergenic 40.0%
!! TGCTATTTCAAGTGTAGGAC+TGG + chr5_3:2388713-2388732 Msa0791430:intron 40.0%
!! TTTCAAGTGTAGGACTGGTT+TGG + chr5_3:2388718-2388737 Msa0791430:intron 40.0%
! TATCTAGGTAGGGAGTTTTG+TGG + chr5_3:2389201-2389220 Msa0791430:intron 40.0%
TTTCTATTCGATTGCAGCCA+TGG + chr5_3:2389378-2389397 Msa0791430:CDS 40.0%
!! AACCTTTTGAAGGTGATCTG+CGG - chr5_3:2389413-2389432 None:intergenic 40.0%
TATGAAGGTGGAGGTTGAAT+GGG + chr5_3:2389533-2389552 Msa0791430:intron 40.0%
! AGGTTGTTTGGGTTCAAACA+AGG - chr5_3:2389572-2389591 None:intergenic 40.0%
GTTTGAACCCAAACAACCTA+TGG + chr5_3:2389573-2389592 Msa0791430:intron 40.0%
GCTACAACTGAGAAATCAGA+TGG + chr5_3:2389663-2389682 Msa0791430:intron 40.0%
GAACATCCAATGTTTGTAGG+TGG + chr5_3:2389844-2389863 Msa0791430:intron 40.0%
TAGTGACCACCTACAAACAT+TGG - chr5_3:2389853-2389872 None:intergenic 40.0%
TTTGATATTGGGTGGTCTAC+AGG + chr5_3:2390030-2390049 Msa0791430:intron 40.0%
! AGGCAGCTTCAATGTTTTGT+GGG + chr5_3:2390081-2390100 Msa0791430:CDS 40.0%
TTGAAACTGCTGGGAAATCT+TGG + chr5_3:2390141-2390160 Msa0791430:CDS 40.0%
TCTCCCTACAAAACTGTGTT+AGG + chr5_3:2390481-2390500 Msa0791430:intron 40.0%
!! CACTCCTAACACAGTTTTGT+AGG - chr5_3:2390488-2390507 None:intergenic 40.0%
! TGGTTGACTCTAGCCAAAAA+AGG - chr5_3:2390525-2390544 None:intergenic 40.0%
TGTCTTACTAGCATGATGGT+AGG + chr5_3:2390562-2390581 Msa0791430:intron 40.0%
TTAGGAGAGTTAGTCCTTCA+CGG + chr5_3:2390795-2390814 Msa0791430:intron 40.0%
ACATGAAGCTAGAGGTCATA+AGG - chr5_3:2390935-2390954 None:intergenic 40.0%
CAGTAACTTCAATTACGGCA+GGG + chr5_3:2391033-2391052 Msa0791430:intron 40.0%
GCTTGGGGACTAATCATATA+AGG - chr5_3:2391106-2391125 None:intergenic 40.0%
TTGATATCCTTTCTTGGGGT+AGG - chr5_3:2391211-2391230 None:intergenic 40.0%
! ATCTTGACTAGCTAGCTACT+TGG - chr5_3:2391521-2391540 None:intergenic 40.0%
! ACTAGGGAAAGCATACTAGA+TGG + chr5_3:2391660-2391679 Msa0791430:three_prime_UTR 40.0%
GAAAACTGTAATGCCCTGAA+TGG + chr5_3:2391989-2392008 Msa0791430:three_prime_UTR 40.0%
! GTGGTGGAAAGGTGAATTGA+CGG - chr5_3:2387866-2387885 None:intergenic 45.0%
GGGAATGAGGATTGAGGATT+TGG - chr5_3:2387941-2387960 None:intergenic 45.0%
!! TGGTGTCTTGTTTGGGAATG+AGG - chr5_3:2387954-2387973 None:intergenic 45.0%
CGAGAGATGGAATCTGAGAA+AGG - chr5_3:2387988-2388007 None:intergenic 45.0%
GCTTTATACCTCGGAGTGAA+GGG - chr5_3:2388053-2388072 None:intergenic 45.0%
TTCCCTCAAACTCCAACAGT+TGG + chr5_3:2389157-2389176 Msa0791430:CDS 45.0%
TCCCTCAAACTCCAACAGTT+GGG + chr5_3:2389158-2389177 Msa0791430:CDS 45.0%
ACCCAACTGTTGGAGTTTGA+GGG - chr5_3:2389162-2389181 None:intergenic 45.0%
AACCCAACTGTTGGAGTTTG+AGG - chr5_3:2389163-2389182 None:intergenic 45.0%
TCAAACTCCAACAGTTGGGT+TGG + chr5_3:2389162-2389181 Msa0791430:CDS 45.0%
!! GAGTTTGCTGTCTGTCTTTG+AGG + chr5_3:2389238-2389257 Msa0791430:intron 45.0%
GGAGACACTCAAGATAATGC+AGG + chr5_3:2389309-2389328 Msa0791430:CDS 45.0%
GATAATGCAGGAACAAGTGC+AGG + chr5_3:2389321-2389340 Msa0791430:CDS 45.0%
TATTCGATTGCAGCCATGGA+TGG + chr5_3:2389382-2389401 Msa0791430:CDS 45.0%
ATTCGATTGCAGCCATGGAT+GGG + chr5_3:2389383-2389402 Msa0791430:CDS 45.0%
AACCGCAGATCACCTTCAAA+AGG + chr5_3:2389408-2389427 Msa0791430:CDS 45.0%
GTATGAAGGTGGAGGTTGAA+TGG + chr5_3:2389532-2389551 Msa0791430:intron 45.0%
! GAGGCAGCTTCAATGTTTTG+TGG + chr5_3:2390080-2390099 Msa0791430:CDS 45.0%
! GGCAGCTTCAATGTTTTGTG+GGG + chr5_3:2390082-2390101 Msa0791430:CDS 45.0%
TGCTGGGAAATCTTGGAATG+AGG + chr5_3:2390148-2390167 Msa0791430:CDS 45.0%
TGCTAGTAAGACATCCCCAA+TGG - chr5_3:2390555-2390574 None:intergenic 45.0%
GGGATGTCTTACTAGCATGA+TGG + chr5_3:2390558-2390577 Msa0791430:intron 45.0%
! TAGGGAGTACATGAAGCTAG+AGG - chr5_3:2390943-2390962 None:intergenic 45.0%
GAATGTTGTGTGCGACATGT+GGG - chr5_3:2390976-2390995 None:intergenic 45.0%
CCTGCCGTAATTGAAGTTAC+TGG - chr5_3:2391035-2391054 None:intergenic 45.0%
CCAGTAACTTCAATTACGGC+AGG + chr5_3:2391032-2391051 Msa0791430:intron 45.0%
GTGCCAAGCATAATAGCTAC+TGG - chr5_3:2391189-2391208 None:intergenic 45.0%
AACATAGTCGCACACCACTA+CGG + chr5_3:2391294-2391313 Msa0791430:intron 45.0%
CAATCAAAAGGTGACCGTAG+TGG - chr5_3:2391311-2391330 None:intergenic 45.0%
TTACAGGCATTTGTAGCAGC+AGG + chr5_3:2391461-2391480 Msa0791430:intron 45.0%
TACAGGCATTTGTAGCAGCA+GGG + chr5_3:2391462-2391481 Msa0791430:intron 45.0%
GAATCCAAACCGCATCAGTT+TGG + chr5_3:2391610-2391629 Msa0791430:three_prime_UTR 45.0%
AAACCGCATCAGTTTGGTCA+GGG + chr5_3:2391616-2391635 Msa0791430:three_prime_UTR 45.0%
ATTGCTCAGAGCTCATGACT+AGG + chr5_3:2391643-2391662 Msa0791430:three_prime_UTR 45.0%
TTGCTCAGAGCTCATGACTA+GGG + chr5_3:2391644-2391663 Msa0791430:three_prime_UTR 45.0%
! TGTAATGCCCTGAATGGGTT+GGG + chr5_3:2391995-2392014 Msa0791430:three_prime_UTR 45.0%
! TCGACATAATGGGGGCACAA+TGG + chr5_3:2387748-2387767 Msa0791430:five_prime_UTR 50.0%
!! TGAATTGACGGTGCTGCATG+TGG - chr5_3:2387854-2387873 None:intergenic 50.0%
!! TGATTGAGGTGGTGGTGGAA+AGG - chr5_3:2387877-2387896 None:intergenic 50.0%
ATCATCGCCGGAGCAACATT+CGG + chr5_3:2387893-2387912 Msa0791430:CDS 50.0%
TAGGGTTCCGAATGTTGCTC+CGG - chr5_3:2387903-2387922 None:intergenic 50.0%
AACTTTCGGCATGGCGAAGA+AGG - chr5_3:2388020-2388039 None:intergenic 50.0%
! AGGGTGTTCCCAGGAACTTT+CGG - chr5_3:2388034-2388053 None:intergenic 50.0%
! GGCTTTATACCTCGGAGTGA+AGG - chr5_3:2388054-2388073 None:intergenic 50.0%
TGCGTTGTGCAGATCATGAC+CGG + chr5_3:2389096-2389115 Msa0791430:intron 50.0%
TCCTTCCCTGACTTACTCAG+AGG - chr5_3:2389122-2389141 None:intergenic 50.0%
CAGGAATCCAACCCAACTGT+TGG - chr5_3:2389172-2389191 None:intergenic 50.0%
GGAACAAGTGCAGGAACTAC+TGG + chr5_3:2389330-2389349 Msa0791430:CDS 50.0%
CTGCACTGCTTGAAACTGCT+GGG + chr5_3:2390132-2390151 Msa0791430:CDS 50.0%
CGAATGTTGTGTGCGACATG+TGG - chr5_3:2390977-2390996 None:intergenic 50.0%
! CAGGGAATGTCTTTTGCTCG+TGG + chr5_3:2391051-2391070 Msa0791430:intron 50.0%
GCATTTGTAGCAGCAGGGTT+TGG + chr5_3:2391467-2391486 Msa0791430:CDS 50.0%
TTTGTAGCAGCAGGGTTTGG+TGG + chr5_3:2391470-2391489 Msa0791430:CDS 50.0%
! TTGTAGCAGCAGGGTTTGGT+GGG + chr5_3:2391471-2391490 Msa0791430:CDS 50.0%
! TTTGGTGGGTGGAAGCTTCA+GGG + chr5_3:2391485-2391504 Msa0791430:CDS 50.0%
CTGACCAAACTGATGCGGTT+TGG - chr5_3:2391617-2391636 None:intergenic 50.0%
CAAACCGCATCAGTTTGGTC+AGG + chr5_3:2391615-2391634 Msa0791430:three_prime_UTR 50.0%
CTGTAATGCCCTGAATGGGT+TGG + chr5_3:2391994-2392013 Msa0791430:three_prime_UTR 50.0%
ACCACCACCTCAATCATCGC+CGG + chr5_3:2387881-2387900 Msa0791430:CDS 55.0%
TGTTGCTCCGGCGATGATTG+AGG - chr5_3:2387891-2387910 None:intergenic 55.0%
CATGGCGAAGAAGGATGAGG+CGG - chr5_3:2388011-2388030 None:intergenic 55.0%
TTCGCCATGCCGAAAGTTCC+TGG + chr5_3:2388022-2388041 Msa0791430:CDS 55.0%
TCGCCATGCCGAAAGTTCCT+GGG + chr5_3:2388023-2388042 Msa0791430:CDS 55.0%
GTTCCCAGGAACTTTCGGCA+TGG - chr5_3:2388029-2388048 None:intergenic 55.0%
ACCGGCCTCTGAGTAAGTCA+GGG + chr5_3:2389114-2389133 Msa0791430:CDS 55.0%
TCCCTGACTTACTCAGAGGC+CGG - chr5_3:2389118-2389137 None:intergenic 55.0%
GCCTCTGAGTAAGTCAGGGA+AGG + chr5_3:2389118-2389137 Msa0791430:CDS 55.0%
ATCTGCGGTTTGCCCATCCA+TGG - chr5_3:2389398-2389417 None:intergenic 55.0%
TTGGGTGGTCTACAGGTGCA+TGG + chr5_3:2390037-2390056 Msa0791430:intron 55.0%
TGGGTGGTCTACAGGTGCAT+GGG + chr5_3:2390038-2390057 Msa0791430:intron 55.0%
ACAGGTGCATGGGACACAAC+AGG + chr5_3:2390048-2390067 Msa0791430:intron 55.0%
CAGGTGCATGGGACACAACA+GGG + chr5_3:2390049-2390068 Msa0791430:intron 55.0%
AGGTGCATGGGACACAACAG+GGG + chr5_3:2390050-2390069 Msa0791430:intron 55.0%
GCTGCACTGCTTGAAACTGC+TGG + chr5_3:2390131-2390150 Msa0791430:CDS 55.0%
CTTGGCACCTACCCCAAGAA+AGG + chr5_3:2391201-2391220 Msa0791430:intron 55.0%
! GTTTGGTGGGTGGAAGCTTC+AGG + chr5_3:2391484-2391503 Msa0791430:CDS 55.0%
ACGCCCTGACCAAACTGATG+CGG - chr5_3:2391622-2391641 None:intergenic 55.0%
! GGCGATGATTGAGGTGGTGG+TGG - chr5_3:2387882-2387901 None:intergenic 60.0%
TCCGGCGATGATTGAGGTGG+TGG - chr5_3:2387885-2387904 None:intergenic 60.0%
TGCTCCGGCGATGATTGAGG+TGG - chr5_3:2387888-2387907 None:intergenic 60.0%
AAGGATGAGGCGGCGAGAGA+TGG - chr5_3:2388001-2388020 None:intergenic 60.0%
CGGCATGGCGAAGAAGGATG+AGG - chr5_3:2388014-2388033 None:intergenic 60.0%
!! TCGGAGTGAAGGGTGTTCCC+AGG - chr5_3:2388043-2388062 None:intergenic 60.0%
TGGGAACACCCTTCACTCCG+AGG + chr5_3:2388042-2388061 Msa0791430:CDS 60.0%
GACCGGCCTCTGAGTAAGTC+AGG + chr5_3:2389113-2389132 Msa0791430:CDS 60.0%
CTTGCGACAGCGATGCAGCA+CGG + chr5_3:2389281-2389300 Msa0791430:intron 60.0%
! CAGCGATGCAGCACGGACTA+AGG + chr5_3:2389288-2389307 Msa0791430:intron 60.0%
GGTGCATGGGACACAACAGG+GGG + chr5_3:2390051-2390070 Msa0791430:intron 60.0%
CATGGGACACAACAGGGGGT+GGG + chr5_3:2390055-2390074 Msa0791430:CDS 60.0%
ACACAACAGGGGGTGGGAAG+AGG + chr5_3:2390061-2390080 Msa0791430:CDS 60.0%
!! TAGCAGCAGGGTTTGGTGGG+TGG + chr5_3:2391474-2391493 Msa0791430:CDS 60.0%
GCAGGAACTACTGGACGCCG+AGG + chr5_3:2389339-2389358 Msa0791430:CDS 65.0%
GCATGGGACACAACAGGGGG+TGG + chr5_3:2390054-2390073 Msa0791430:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 2387747 2392018 2387747 ID=Msa0791430;Name=Msa0791430
chr5_3 mRNA 2387747 2392018 2387747 ID=Msa0791430-mRNA-1;Parent=Msa0791430;Name=Msa0791430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=94|0.6|0.83|1|0.6|0.83|6|489|229
chr5_3 exon 2387747 2388063 2387747 ID=Msa0791430-mRNA-1:exon:1047;Parent=Msa0791430-mRNA-1
chr5_3 exon 2389108 2389207 2389108 ID=Msa0791430-mRNA-1:exon:1048;Parent=Msa0791430-mRNA-1
chr5_3 exon 2389291 2389470 2389291 ID=Msa0791430-mRNA-1:exon:1049;Parent=Msa0791430-mRNA-1
chr5_3 exon 2389540 2389545 2389540 ID=Msa0791430-mRNA-1:exon:1050;Parent=Msa0791430-mRNA-1
chr5_3 exon 2390052 2390169 2390052 ID=Msa0791430-mRNA-1:exon:1051;Parent=Msa0791430-mRNA-1
chr5_3 exon 2391467 2392018 2391467 ID=Msa0791430-mRNA-1:exon:1052;Parent=Msa0791430-mRNA-1
chr5_3 five_prime_UTR 2387747 2387840 2387747 ID=Msa0791430-mRNA-1:five_prime_utr;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2387841 2388063 2387841 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2389108 2389207 2389108 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2389291 2389470 2389291 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2389540 2389545 2389540 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2390052 2390169 2390052 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 CDS 2391467 2391529 2391467 ID=Msa0791430-mRNA-1:cds;Parent=Msa0791430-mRNA-1
chr5_3 three_prime_UTR 2391530 2392018 2391530 ID=Msa0791430-mRNA-1:three_prime_utr;Parent=Msa0791430-mRNA-1
Gene Sequence

>Msa0791430

ATGCATTCTACCACATGCAGCACCGTCAATTCACCTTTCCACCACCACCTCAATCATCGCCGGAGCAACATTCGGAACCCTAATTTCAGATTACGCGCCAAATCCTCAATCCTCATTCCCAAACAAGACACCAAGCTAAAAGAGCCTTTCTCAGATTCCATCTCTCGCCGCCTCATCCTTCTTCGCCATGCCGAAAGTTCCTGGGAACACCCTTCACTCCGAGATCATGACCGGCCTCTGAGTAAGTCAGGGAAGGAAGATGCTGTGAAAGTTTCCCTCAAACTCCAACAGTTGGGTTGGATTCCTGAACTTATACTATCTAGCGATGCAGCACGGACTAAGGAGACACTCAAGATAATGCAGGAACAAGTGCAGGAACTACTGGACGCCGAGGTTCATTTTGTTTCTAGTTTCTATTCGATTGCAGCCATGGATGGGCAAACCGCAGATCACCTTCAAAAGGTTATTTGTAAATATTCAAGGGATGAGATATTAACTGTCATGTGGAGGTGCATGGGACACAACAGGGGGTGGGAAGAGGCAGCTTCAATGTTTTGTGGGGCATCTGTAGAATTAAAGACATGCAATGCTGCACTGCTTGAAACTGCTGGGAAATCTTGGAATGAGGCATTTGTAGCAGCAGGGTTTGGTGGGTGGAAGCTTCAGGGCATATTAAAACCAAGTAGCTAG

Protein sequence

>Msa0791430

MHSTTCSTVNSPFHHHLNHRRSNIRNPNFRLRAKSSILIPKQDTKLKEPFSDSISRRLILLRHAESSWEHPSLRDHDRPLSKSGKEDAVKVSLKLQQLGWIPELILSSDAARTKETLKIMQEQVQELLDAEVHFVSSFYSIAAMDGQTADHLQKVICKYSRDEILTVMWRCMGHNRGWEEAASMFCGASVELKTCNAALLETAGKSWNEAFVAAGFGGWKLQGILKPSS*