AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1378840


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1378840 MtrunA17_Chr4g0006731 97.786 271 6 0 1 271 1 271 0.0 552
Msa1378840 MtrunA17_Chr7g0242451 72.656 256 67 3 1 256 1 253 6.46e-137 386
Msa1378840 MtrunA17_Chr3g0113401 66.406 256 86 0 1 256 1 256 5.29e-128 364
Msa1378840 MtrunA17_Chr7g0242401 67.729 251 79 2 5 255 32 280 4.05e-127 362
Msa1378840 MtrunA17_Chr7g0242461 64.062 256 90 1 1 256 1 254 7.97e-127 361
Msa1378840 MtrunA17_Chr7g0242431 68.000 250 78 2 6 255 32 279 2.05e-125 358
Msa1378840 MtrunA17_Chr7g0242411 65.737 251 79 4 5 255 1 244 2.69e-117 336
Msa1378840 MtrunA17_Chr7g0242391 57.422 256 104 3 5 256 1 255 7.76e-103 300
Msa1378840 MtrunA17_Chr7g0242441 47.755 245 64 4 5 249 2 182 4.01e-67 207
Msa1378840 MtrunA17_Chr2g0283411 37.712 236 135 4 6 233 4 235 1.12e-51 169
Msa1378840 MtrunA17_Chr2g0283421 39.048 210 122 3 6 209 5 214 1.85e-49 164
Msa1378840 MtrunA17_Chr4g0006701 94.828 58 3 0 221 278 1 58 2.49e-34 120
Msa1378840 MtrunA17_Chr4g0059001 34.272 213 130 4 26 232 49 257 4.62e-33 122
Msa1378840 MtrunA17_Chr2g0283391 29.609 179 99 5 41 209 1 162 3.09e-17 78.6
Msa1378840 MtrunA17_Chr4g0006711 94.595 37 2 0 102 138 1 37 2.78e-16 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1378840 AT3G11210.1 63.281 256 94 0 1 256 1 256 2.01e-123 353
Msa1378840 AT2G38180.1 60.938 256 89 4 1 254 1 247 3.15e-109 319
Msa1378840 AT5G62930.1 37.768 233 136 2 5 232 1 229 6.53e-55 178
Msa1378840 AT5G62930.2 37.768 233 136 2 5 232 27 255 1.97e-54 177
Msa1378840 AT5G45920.1 40.952 210 119 3 5 209 2 211 1.24e-53 174
Msa1378840 AT5G45920.4 40.952 210 119 3 5 209 2 211 1.24e-53 174
Msa1378840 AT5G45920.2 40.323 186 106 3 5 185 2 187 1.78e-45 152
Msa1378840 AT5G45920.3 40.323 186 106 3 5 185 2 187 1.78e-45 152
Msa1378840 AT5G62930.3 33.136 169 104 2 69 232 7 171 1.65e-29 110

Find 74 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGTATTTGAAATGATTT+TGG 0.099467 tig0020189:-134088 Msa1378840:three_prime_UTR
TTTCCCATTCAAAATGTTTC+TGG 0.167567 tig0020189:+134192 None:intergenic
AACACAATTTGAGGCCTTAT+TGG 0.242625 tig0020189:+137313 None:intergenic
TTTAGTATTGGAAGGGAAAA+TGG 0.244883 tig0020189:-137341 Msa1378840:exon
GAATTCAAGGCGTGCTGTTC+AGG 0.251854 tig0020189:-136491 Msa1378840:CDS
GACTTAAAGCAGTAATATAT+TGG 0.251971 tig0020189:-134785 Msa1378840:intron
CACAAATTCACGAAACATTC+AGG 0.270335 tig0020189:-135523 Msa1378840:intron
GAATCTTCTGCAAACTCATT+TGG 0.330143 tig0020189:+134275 None:intergenic
TGACAGCTGATTCTTCAAAT+TGG 0.333543 tig0020189:+134132 None:intergenic
GAAGATTATTATCCATCTTA+AGG 0.337002 tig0020189:-135676 Msa1378840:intron
ACTATATTCAGAAGCATGTT+TGG 0.339649 tig0020189:-134731 Msa1378840:CDS
GATTCATTTGTCCTCTTTAG+TGG 0.350705 tig0020189:+134760 None:intergenic
AGGCCTCAAATTGTGTTGTT+TGG 0.353098 tig0020189:-137307 Msa1378840:CDS
TAGTTATAGTGATGAAGGTT+GGG 0.383224 tig0020189:-137266 Msa1378840:CDS
AAGGCGTGCTGTTCAGGTTC+TGG 0.385053 tig0020189:-136485 Msa1378840:CDS
GTGATGACCATTCGATGGTT+TGG 0.395292 tig0020189:+134154 None:intergenic
TGCATGCACTTGTTATAGTC+AGG 0.397643 tig0020189:+137426 None:intergenic
GGAAAATGGTAGGACCAATA+AGG 0.411315 tig0020189:-137327 Msa1378840:exon
TCTATAGCAACTGGATCATA+TGG 0.419003 tig0020189:+134251 None:intergenic
CAACTTAGTTATAGTGATGA+AGG 0.419570 tig0020189:-137271 Msa1378840:CDS
ACTTAAAGCAGTAATATATT+GGG 0.420900 tig0020189:-134784 Msa1378840:intron
CATCCACATCCATCTGGCCT+TGG 0.424382 tig0020189:-135738 Msa1378840:CDS
CTATAAATTAAGAACATTTG+TGG 0.426437 tig0020189:-137371 Msa1378840:five_prime_UTR
CACTTCAGCAAAGGGATGAT+TGG 0.428841 tig0020189:-134663 Msa1378840:CDS
ATTGATTTCCAGTGTAGACT+TGG 0.433496 tig0020189:+134299 None:intergenic
TGAATTTGTGCCTCATTGAC+TGG 0.439229 tig0020189:+135536 None:intergenic
CTACTGTCAATGTCTCCAAC+TGG 0.451353 tig0020189:-134220 Msa1378840:CDS
GGTTCCAGTCGGCGTCTTCG+AGG 0.470091 tig0020189:+134321 None:intergenic
TTATGCGAGTCTTCTTTGAC+AGG 0.476039 tig0020189:+135576 None:intergenic
ATGTTCTTAATTTATAGACT+TGG 0.481902 tig0020189:+137377 None:intergenic
CTGGTCTGCACTTCAGCAAA+GGG 0.483151 tig0020189:-134671 Msa1378840:CDS
GATACTGTGGTTGGAATTCA+AGG 0.484531 tig0020189:-136504 Msa1378840:CDS
TGCTTCTGAATATAGTCTAC+AGG 0.490525 tig0020189:+134738 None:intergenic
AGGTCCTCGAAGACGCCGAC+TGG 0.497251 tig0020189:-134325 Msa1378840:CDS
TTGGTTATTGTGTACTTTGG+TGG 0.498216 tig0020189:-135774 Msa1378840:CDS
TTAGTTATAGTGATGAAGGT+TGG 0.498885 tig0020189:-137267 Msa1378840:CDS
ATGTCAAGGCCATTGACCTC+TGG 0.499532 tig0020189:-134690 Msa1378840:CDS
TCTATTCATCCACATCCATC+TGG 0.500776 tig0020189:-135744 Msa1378840:CDS
TGTGGAGTATAATTTAGTAT+TGG 0.505954 tig0020189:-137353 Msa1378840:five_prime_UTR
TTGATTTCCAGTGTAGACTT+GGG 0.516004 tig0020189:+134300 None:intergenic
GAGTATAATTTAGTATTGGA+AGG 0.517079 tig0020189:-137349 Msa1378840:five_prime_UTR
TGTGGAATTCAACCTTAAGA+TGG 0.529846 tig0020189:+135664 None:intergenic
GAACCAAACAACACAATTTG+AGG 0.531325 tig0020189:+137304 None:intergenic
AGTTATAGTGATGAAGGTTG+GGG 0.537356 tig0020189:-137265 Msa1378840:CDS
TCTGGTCTGCACTTCAGCAA+AGG 0.543201 tig0020189:-134672 Msa1378840:CDS
AATTGGTGATGACCATTCGA+TGG 0.544305 tig0020189:+134149 None:intergenic
TGCTGTTGAGCAACCATCGT+TGG 0.555054 tig0020189:-135793 Msa1378840:CDS
TGGAATTCATTTGTCACATG+AGG 0.558725 tig0020189:-134378 Msa1378840:CDS
AAGTGCAGACCAGAGGTCAA+TGG 0.560897 tig0020189:+134681 None:intergenic
TGCATTTCCAAACCATCGAA+TGG 0.568329 tig0020189:-134161 Msa1378840:CDS
TACAAACTTGTATTCTCGCA+AGG 0.568561 tig0020189:-137233 Msa1378840:intron
ACATGAGGACCAAGGCCAGA+TGG 0.572819 tig0020189:+135729 None:intergenic
GGACCAAGGCCAGATGGATG+TGG 0.575529 tig0020189:+135735 None:intergenic
AGTTGTGAAAGAGATATTGA+AGG 0.577845 tig0020189:-134345 Msa1378840:CDS
TGGCCTTGACATTCATCTCA+TGG 0.580073 tig0020189:+134701 None:intergenic
AGTATAATTTAGTATTGGAA+GGG 0.581719 tig0020189:-137348 Msa1378840:five_prime_UTR
ATATATTGGGACCACTAAAG+AGG 0.585513 tig0020189:-134771 Msa1378840:CDS
TCGTTGGTTATTGTGTACTT+TGG 0.585768 tig0020189:-135777 Msa1378840:CDS
GTATTGGAAGGGAAAATGGT+AGG 0.592463 tig0020189:-137337 Msa1378840:exon
ATGTTTCTGGAAGTTCCAGT+TGG 0.594171 tig0020189:+134205 None:intergenic
CAGTTCTCCTCCAGTCAATG+AGG 0.595674 tig0020189:-135546 Msa1378840:CDS
ACTGGAACCCAAGTCTACAC+TGG 0.596478 tig0020189:-134307 Msa1378840:CDS
TCTGGATACAATATTTCCCA+AGG 0.600454 tig0020189:-136467 Msa1378840:intron
ACTATAACTAAGTTGAACAA+TGG 0.604564 tig0020189:+137279 None:intergenic
GGAATTCATTTGTCACATGA+GGG 0.607224 tig0020189:-134377 Msa1378840:CDS
GTGTAGACTTGGGTTCCAGT+CGG 0.629499 tig0020189:+134310 None:intergenic
ACTATAACAAGTGCATGCAA+AGG 0.632866 tig0020189:-137422 Msa1378840:five_prime_UTR
TATTCTTCAAGGGGTACATG+AGG 0.652455 tig0020189:+135714 None:intergenic
TTTGCTGAAGTGCAGACCAG+AGG 0.667155 tig0020189:+134674 None:intergenic
TACTTACGTGAAGCAAACAT+CGG 0.669235 tig0020189:+134639 None:intergenic
AAGTACACAATAACCAACGA+TGG 0.696454 tig0020189:+135780 None:intergenic
ATTTGTGCCTCATTGACTGG+AGG 0.707676 tig0020189:+135539 None:intergenic
GTGCCATGAGATGAATGTCA+AGG 0.713777 tig0020189:-134704 Msa1378840:CDS
CAAGGGGTACATGAGGACCA+AGG 0.723393 tig0020189:+135721 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTCAATTAATAGA+AGG - tig0020189:133436-133455 Msa1378840:intron 10.0%
!! TAATAAAATTATAACAGAAT+AGG - tig0020189:134943-134962 Msa1378840:intron 10.0%
!!! ATATACTTTTTTTTAATGAA+AGG - tig0020189:136749-136768 Msa1378840:intron 10.0%
!!! TATACTTTTTTTTAATGAAA+GGG - tig0020189:136750-136769 Msa1378840:intron 10.0%
!! AAAATTATTAGAAAAACAAT+TGG - tig0020189:137146-137165 Msa1378840:intron 10.0%
!!! TATTTTCTTTTTAATCCAAA+AGG + tig0020189:133400-133419 None:intergenic 15.0%
!!! CAATTTTTTTGTCTAATTTA+TGG + tig0020189:133519-133538 None:intergenic 15.0%
!! CATAAATTAGACAAAAAAAT+TGG - tig0020189:133517-133536 Msa1378840:intron 15.0%
!! AAAATTGGAAATTTAATTGA+TGG - tig0020189:133532-133551 Msa1378840:intron 15.0%
!!! TTTTCATCATGATTAATTTA+TGG - tig0020189:133963-133982 Msa1378840:intron 15.0%
!! ATTTATATCTTTATAACCAA+CGG + tig0020189:134342-134361 None:intergenic 15.0%
!! TAAATATTATGGTAAAAGTA+GGG + tig0020189:134435-134454 None:intergenic 15.0%
!! CAAAATGAATCTAAATATTA+TGG + tig0020189:134446-134465 None:intergenic 15.0%
!! AATCAAATAGCATATATAAA+AGG + tig0020189:134885-134904 None:intergenic 15.0%
!!! TTTTCATTTATAAACAATCT+TGG + tig0020189:135288-135307 None:intergenic 15.0%
!! TGTAAAAAGAAAATCAAAAT+TGG + tig0020189:135476-135495 None:intergenic 15.0%
!! AACTCTAATGAATAAATTAT+TGG - tig0020189:135527-135546 Msa1378840:CDS 15.0%
!!! AAAAGTATTTGAAATGATTT+TGG - tig0020189:136246-136265 Msa1378840:intron 15.0%
!!! AAAGTATTTGAAATGATTTT+GGG - tig0020189:136247-136266 Msa1378840:intron 15.0%
!! ATATAAATGATATGTATATG+TGG + tig0020189:136731-136750 None:intergenic 15.0%
!!! GAAAATATATAATGGAATAT+AGG + tig0020189:137231-137250 None:intergenic 15.0%
!! ATGTTCTTAATTTATAGACT+TGG + tig0020189:132960-132979 None:intergenic 20.0%
!! CTATAAATTAAGAACATTTG+TGG - tig0020189:132963-132982 Msa1378840:three_prime_UTR 20.0%
!!! AGTATAATTTAGTATTGGAA+GGG - tig0020189:132986-133005 Msa1378840:intron 20.0%
!!! AAATAAAATTTGCTCTCTTT+TGG - tig0020189:133193-133212 Msa1378840:intron 20.0%
!! TCATGAAAAAAAAAAACTAC+AGG + tig0020189:133252-133271 None:intergenic 20.0%
!!! AAAAACAACTTGTTAACAAT+TGG + tig0020189:133279-133298 None:intergenic 20.0%
!! TATCTGAATCTTGATAAATA+TGG - tig0020189:133566-133585 Msa1378840:intron 20.0%
!!! ATTTCTCTATAGCATTTTTA+TGG - tig0020189:133750-133769 Msa1378840:intron 20.0%
!!! AAATTTTGAATCAATACCTT+GGG + tig0020189:133886-133905 None:intergenic 20.0%
!!! AAAATTTTGAATCAATACCT+TGG + tig0020189:133887-133906 None:intergenic 20.0%
!! CTTATTTATATGTATGTGTA+GGG - tig0020189:134277-134296 Msa1378840:CDS 20.0%
!! CTAAATATTATGGTAAAAGT+AGG + tig0020189:134436-134455 None:intergenic 20.0%
!!! TGATTATTTCTCATACTTAA+AGG - tig0020189:134482-134501 Msa1378840:intron 20.0%
!!! GGTAAAAAAATTGTACATTT+TGG - tig0020189:134972-134991 Msa1378840:intron 20.0%
!! ACAAAGATGTTATAAACTAT+GGG + tig0020189:135205-135224 None:intergenic 20.0%
!! AACAAAGATGTTATAAACTA+TGG + tig0020189:135206-135225 None:intergenic 20.0%
!!! AATATATCTCATGTAACTTT+TGG + tig0020189:135322-135341 None:intergenic 20.0%
!! AAAAGTTACATGAGATATAT+TGG - tig0020189:135321-135340 Msa1378840:intron 20.0%
!! ACTTAAAGCAGTAATATATT+GGG - tig0020189:135550-135569 Msa1378840:CDS 20.0%
!! AAAAATGTGGTTAAAAAATG+CGG + tig0020189:135832-135851 None:intergenic 20.0%
!! CTTAATACTATAGAAAAATG+TGG + tig0020189:135845-135864 None:intergenic 20.0%
!!! CACATTTTTCTATAGTATTA+AGG - tig0020189:135843-135862 Msa1378840:intron 20.0%
!!! TTGTCTTGATACATTTTATA+GGG - tig0020189:135932-135951 Msa1378840:intron 20.0%
!! CTAGAAATTTGAAAACTAAA+AGG + tig0020189:136420-136439 None:intergenic 20.0%
!! ATGGTAAAAAAGTTCTTAAA+TGG - tig0020189:136691-136710 Msa1378840:intron 20.0%
!!! ATATATAATGGAATATAGGA+CGG + tig0020189:137227-137246 None:intergenic 20.0%
! TGTGGAGTATAATTTAGTAT+TGG - tig0020189:132981-133000 Msa1378840:intron 25.0%
!! GAGTATAATTTAGTATTGGA+AGG - tig0020189:132985-133004 Msa1378840:intron 25.0%
!! ACTATAACTAAGTTGAACAA+TGG + tig0020189:133058-133077 None:intergenic 25.0%
! GATTAATTTATGGTTACTTG+TGG - tig0020189:133973-133992 Msa1378840:intron 25.0%
! ATTGATATCTTAACCGTTAA+CGG + tig0020189:134175-134194 None:intergenic 25.0%
! GCTTATTTATATGTATGTGT+AGG - tig0020189:134276-134295 Msa1378840:CDS 25.0%
! GTTTGTAAAACTGTTAGATT+TGG + tig0020189:134373-134392 None:intergenic 25.0%
!! ATTTTCTCTGTATTCTTCAA+GGG + tig0020189:134633-134652 None:intergenic 25.0%
!! TATTTTCTCTGTATTCTTCA+AGG + tig0020189:134634-134653 None:intergenic 25.0%
! GAAGATTATTATCCATCTTA+AGG - tig0020189:134658-134677 Msa1378840:CDS 25.0%
!! ATGAAAGAGAATATGAGTTT+TGG - tig0020189:134916-134935 Msa1378840:intron 25.0%
! TTATAACAGAATAGGACATA+AGG - tig0020189:134951-134970 Msa1378840:intron 25.0%
! GACTTAAAGCAGTAATATAT+TGG - tig0020189:135549-135568 Msa1378840:CDS 25.0%
!! ATCACATGTGTCTTATTAAA+AGG - tig0020189:135902-135921 Msa1378840:intron 25.0%
!! CTTGTCTTGATACATTTTAT+AGG - tig0020189:135931-135950 Msa1378840:intron 25.0%
!!! TTTTGGGAAAAAGTTATATC+AGG - tig0020189:136263-136282 Msa1378840:intron 25.0%
!!! TAAGAACTTTTTTACCATTG+TGG + tig0020189:136689-136708 None:intergenic 25.0%
!! TATATAATGGAATATAGGAC+GGG + tig0020189:137226-137245 None:intergenic 25.0%
! TTGAAAGAAAAGCTAGAATA+GGG + tig0020189:137325-137344 None:intergenic 25.0%
! TTTGAAAGAAAAGCTAGAAT+AGG + tig0020189:137326-137345 None:intergenic 25.0%
! AGTACTTATAAGCTAGAATA+GGG + tig0020189:137366-137385 None:intergenic 25.0%
! TAGTACTTATAAGCTAGAAT+AGG + tig0020189:137367-137386 None:intergenic 25.0%
! TTTAGTATTGGAAGGGAAAA+TGG - tig0020189:132993-133012 Msa1378840:intron 30.0%
CAACTTAGTTATAGTGATGA+AGG - tig0020189:133063-133082 Msa1378840:intron 30.0%
TTAGTTATAGTGATGAAGGT+TGG - tig0020189:133067-133086 Msa1378840:intron 30.0%
TAGTTATAGTGATGAAGGTT+GGG - tig0020189:133068-133087 Msa1378840:intron 30.0%
! GTTTTTCTCAATAGAGAACT+TGG - tig0020189:133293-133312 Msa1378840:intron 30.0%
GAACTTGGTATTGTGAATTA+TGG - tig0020189:133308-133327 Msa1378840:intron 30.0%
ATTCAATTAATAGAAGGCAG+TGG - tig0020189:133442-133461 Msa1378840:intron 30.0%
!! GTGTTGAGAACATTTTAAGT+AGG - tig0020189:133470-133489 Msa1378840:intron 30.0%
!! TTGAGAACATTTTAAGTAGG+TGG - tig0020189:133473-133492 Msa1378840:intron 30.0%
TTATGGTCCAGTTATATTAG+AGG + tig0020189:133502-133521 None:intergenic 30.0%
ATAACAAAACTATAGCGTAG+TGG + tig0020189:133706-133725 None:intergenic 30.0%
GTCACACATTAACTATACAT+AGG - tig0020189:133789-133808 Msa1378840:intron 30.0%
! TAGGCAGATATAATTTTGAG+AGG - tig0020189:133808-133827 Msa1378840:intron 30.0%
!! ATAATTTTGAGAGGATACTG+TGG - tig0020189:133817-133836 Msa1378840:intron 30.0%
ACTTGTGGAAGTAATTAATC+AGG - tig0020189:133988-134007 Msa1378840:intron 30.0%
CTTGTGGAAGTAATTAATCA+GGG - tig0020189:133989-134008 Msa1378840:intron 30.0%
AACAAAATCTTAGCCGTTAA+CGG - tig0020189:134159-134178 Msa1378840:CDS 30.0%
AATAAGCGATACATAAGACT+TGG + tig0020189:134263-134282 None:intergenic 30.0%
! TTTTCTCTGTATTCTTCAAG+GGG + tig0020189:134632-134651 None:intergenic 30.0%
CAATGTTTGACTAATCCTAA+TGG - tig0020189:134726-134745 Msa1378840:CDS 30.0%
TGTTCACTCATACTTTATAG+TGG - tig0020189:134854-134873 Msa1378840:intron 30.0%
TTGACAAAGGACAACAAAAT+GGG + tig0020189:135021-135040 None:intergenic 30.0%
TTTGACAAAGGACAACAAAA+TGG + tig0020189:135022-135041 None:intergenic 30.0%
! AACTTTATGTGTCGACATAT+CGG + tig0020189:135115-135134 None:intergenic 30.0%
! ACTATATTCAGAAGCATGTT+TGG - tig0020189:135603-135622 Msa1378840:intron 30.0%
GCGGTAAAATAATGCTTATA+CGG + tig0020189:135813-135832 None:intergenic 30.0%
! CTTGATACATTTTATAGGGA+TGG - tig0020189:135936-135955 Msa1378840:intron 30.0%
AGTTGTGAAAGAGATATTGA+AGG - tig0020189:135989-136008 Msa1378840:intron 30.0%
! ACTTCCAGAAACATTTTGAA+TGG - tig0020189:136138-136157 Msa1378840:intron 30.0%
! CTTCCAGAAACATTTTGAAT+GGG - tig0020189:136139-136158 Msa1378840:intron 30.0%
TTTCCCATTCAAAATGTTTC+TGG + tig0020189:136145-136164 None:intergenic 30.0%
! TTCGACTAGTTCCAATTTAT+TGG + tig0020189:136641-136660 None:intergenic 30.0%
GGAATGATCGAGTATTTATT+AGG + tig0020189:136776-136795 None:intergenic 30.0%
!!! GTTTTTTAGAGATGTCGAAT+TGG + tig0020189:136797-136816 None:intergenic 30.0%
GAATGAAAAAACATCCTATG+AGG + tig0020189:136929-136948 None:intergenic 30.0%
ACAAATTATAACGCAGGTTT+AGG + tig0020189:136979-136998 None:intergenic 30.0%
!! GCATTATATTGCTAGCTTTA+AGG - tig0020189:137004-137023 Msa1378840:intron 30.0%
TTAGAAAAACAATTGGACGT+TGG - tig0020189:137153-137172 Msa1378840:intron 30.0%
! ATATAATGGAATATAGGACG+GGG + tig0020189:137225-137244 None:intergenic 30.0%
TGAAAGAAAAGCTAGAATAG+GGG + tig0020189:137324-137343 None:intergenic 30.0%
ACTATAACAAGTGCATGCAA+AGG - tig0020189:132912-132931 Msa1378840:three_prime_UTR 35.0%
! AACACAATTTGAGGCCTTAT+TGG + tig0020189:133024-133043 None:intergenic 35.0%
GAACCAAACAACACAATTTG+AGG + tig0020189:133033-133052 None:intergenic 35.0%
AGTTATAGTGATGAAGGTTG+GGG - tig0020189:133069-133088 Msa1378840:intron 35.0%
TACAAACTTGTATTCTCGCA+AGG - tig0020189:133101-133120 Msa1378840:intron 35.0%
GTGTGACAAGTTAAACTCAT+TGG + tig0020189:133776-133795 None:intergenic 35.0%
TCTGGATACAATATTTCCCA+AGG - tig0020189:133867-133886 Msa1378840:intron 35.0%
AAATTGACAAGCTGATGCTA+TGG - tig0020189:134017-134036 Msa1378840:intron 35.0%
! AGATTTTGTTGCCGGTAATA+GGG + tig0020189:134149-134168 None:intergenic 35.0%
! AAGATTTTGTTGCCGGTAAT+AGG + tig0020189:134150-134169 None:intergenic 35.0%
AAGTACACAATAACCAACGA+TGG + tig0020189:134557-134576 None:intergenic 35.0%
! TCGTTGGTTATTGTGTACTT+TGG - tig0020189:134557-134576 Msa1378840:intron 35.0%
TTGGTTATTGTGTACTTTGG+TGG - tig0020189:134560-134579 Msa1378840:intron 35.0%
TGTGGAATTCAACCTTAAGA+TGG + tig0020189:134673-134692 None:intergenic 35.0%
! CGAAAAAAACAGTGATAGTG+TGG + tig0020189:134691-134710 None:intergenic 35.0%
CACAAATTCACGAAACATTC+AGG - tig0020189:134811-134830 Msa1378840:intron 35.0%
CCTAAGATAGTGTTTGACAA+AGG + tig0020189:135034-135053 None:intergenic 35.0%
CCTTTGTCAAACACTATCTT+AGG - tig0020189:135031-135050 Msa1378840:intron 35.0%
GAAATATATGAGCCGTTTGT+GGG + tig0020189:135258-135277 None:intergenic 35.0%
TGAAATATATGAGCCGTTTG+TGG + tig0020189:135259-135278 None:intergenic 35.0%
! TCTCATGTAACTTTTGGTCA+TGG + tig0020189:135316-135335 None:intergenic 35.0%
!! TGAGATATATTGGTCTTCAG+AGG - tig0020189:135331-135350 Msa1378840:intron 35.0%
ATATATTGGGACCACTAAAG+AGG - tig0020189:135563-135582 Msa1378840:CDS 35.0%
GATTCATTTGTCCTCTTTAG+TGG + tig0020189:135577-135596 None:intergenic 35.0%
TGCTTCTGAATATAGTCTAC+AGG + tig0020189:135599-135618 None:intergenic 35.0%
TACTTACGTGAAGCAAACAT+CGG + tig0020189:135698-135717 None:intergenic 35.0%
ACACAAGAACATGATATTGC+AGG + tig0020189:135782-135801 None:intergenic 35.0%
!! ATAGTTCTGAATCACAACTG+TGG + tig0020189:135881-135900 None:intergenic 35.0%
TGGAATTCATTTGTCACATG+AGG - tig0020189:135956-135975 Msa1378840:intron 35.0%
GGAATTCATTTGTCACATGA+GGG - tig0020189:135957-135976 Msa1378840:intron 35.0%
TTGATTTCCAGTGTAGACTT+GGG + tig0020189:136037-136056 None:intergenic 35.0%
! ATTGATTTCCAGTGTAGACT+TGG + tig0020189:136038-136057 None:intergenic 35.0%
GAATCTTCTGCAAACTCATT+TGG + tig0020189:136062-136081 None:intergenic 35.0%
TCTATAGCAACTGGATCATA+TGG + tig0020189:136086-136105 None:intergenic 35.0%
! GTCTTTTCATCTATAGCAAC+TGG + tig0020189:136095-136114 None:intergenic 35.0%
! TGACAGCTGATTCTTCAAAT+TGG + tig0020189:136205-136224 None:intergenic 35.0%
GAGAGAAGGAACCAATAAAT+TGG - tig0020189:136627-136646 Msa1378840:intron 35.0%
ACAATGGGATACATCATACA+TGG + tig0020189:136896-136915 None:intergenic 35.0%
AACGCAGGTTTAGGTAATTT+GGG + tig0020189:136970-136989 None:intergenic 35.0%
TAACGCAGGTTTAGGTAATT+TGG + tig0020189:136971-136990 None:intergenic 35.0%
CTTGACACAAATTATAACGC+AGG + tig0020189:136985-137004 None:intergenic 35.0%
!! TGCATGCACTTGTTATAGTC+AGG + tig0020189:132911-132930 None:intergenic 40.0%
GTATTGGAAGGGAAAATGGT+AGG - tig0020189:132997-133016 Msa1378840:intron 40.0%
GGAAAATGGTAGGACCAATA+AGG - tig0020189:133007-133026 Msa1378840:intron 40.0%
! AGGCCTCAAATTGTGTTGTT+TGG - tig0020189:133027-133046 Msa1378840:intron 40.0%
AAGAACAGTACTGCATGCAA+TGG - tig0020189:133367-133386 Msa1378840:intron 40.0%
! TGCAATGGAACAGTTCCTTT+TGG - tig0020189:133382-133401 Msa1378840:intron 40.0%
GTGGTGTCCTCTAATATAAC+TGG - tig0020189:133492-133511 Msa1378840:intron 40.0%
!! TTTTGAGAGGATACTGTGGT+TGG - tig0020189:133821-133840 Msa1378840:intron 40.0%
GATACTGTGGTTGGAATTCA+AGG - tig0020189:133830-133849 Msa1378840:intron 40.0%
TGGAAGTAATTAATCAGGGC+TGG - tig0020189:133993-134012 Msa1378840:intron 40.0%
TATGTATGTGACTGACCAGT+TGG - tig0020189:134111-134130 Msa1378840:exon 40.0%
! GATTTTGTTGCCGGTAATAG+GGG + tig0020189:134148-134167 None:intergenic 40.0%
! AACGGCTAAGATTTTGTTGC+CGG + tig0020189:134157-134176 None:intergenic 40.0%
GATCACCTATAGTCATTGTG+TGG - tig0020189:134299-134318 Msa1378840:CDS 40.0%
ATGCACCACACAATGACTAT+AGG + tig0020189:134307-134326 None:intergenic 40.0%
ATAGTCATTGTGTGGTGCAT+TGG - tig0020189:134307-134326 Msa1378840:CDS 40.0%
TCTATTCATCCACATCCATC+TGG - tig0020189:134590-134609 Msa1378840:intron 40.0%
! TATTCTTCAAGGGGTACATG+AGG + tig0020189:134623-134642 None:intergenic 40.0%
TTATGCGAGTCTTCTTTGAC+AGG + tig0020189:134761-134780 None:intergenic 40.0%
TGAATTTGTGCCTCATTGAC+TGG + tig0020189:134801-134820 None:intergenic 40.0%
!! ATGGGCATTGACACATTCAT+TGG + tig0020189:135187-135206 None:intergenic 40.0%
! TGATTTTGCAGACACAATCG+CGG + tig0020189:135378-135397 None:intergenic 40.0%
CGATTGTGTCTGCAAAATCA+AGG - tig0020189:135378-135397 Msa1378840:intron 40.0%
! AAAATCAAGGTTTTCGCCTC+TGG - tig0020189:135391-135410 Msa1378840:intron 40.0%
! AAATCAAGGTTTTCGCCTCT+GGG - tig0020189:135392-135411 Msa1378840:intron 40.0%
!! ATGTTTCTGGAAGTTCCAGT+TGG + tig0020189:136132-136151 None:intergenic 40.0%
TGCATTTCCAAACCATCGAA+TGG - tig0020189:136173-136192 Msa1378840:intron 40.0%
!! AATTGGTGATGACCATTCGA+TGG + tig0020189:136188-136207 None:intergenic 40.0%
!! TATGCTAAGAGCATCCACAA+TGG - tig0020189:136672-136691 Msa1378840:intron 40.0%
AGAGAATAGAGATGTCGCAT+TGG + tig0020189:136841-136860 None:intergenic 40.0%
! TGAGGAGTACAAGGTACAAT+GGG + tig0020189:136911-136930 None:intergenic 40.0%
! ATGAGGAGTACAAGGTACAA+TGG + tig0020189:136912-136931 None:intergenic 40.0%
TTGTACCTTGTACTCCTCAT+AGG - tig0020189:136912-136931 Msa1378840:intron 40.0%
! AACATCCTATGAGGAGTACA+AGG + tig0020189:136920-136939 None:intergenic 40.0%
!! GTTGTACACACGCCATTTTA+TGG - tig0020189:137026-137045 Msa1378840:intron 40.0%
GCAGTACTGTCACCATAAAA+TGG + tig0020189:137041-137060 None:intergenic 40.0%
GCACTATAGAGTGAAATGAG+TGG + tig0020189:137121-137140 None:intergenic 40.0%
CTCATTTCACTCTATAGTGC+AGG - tig0020189:137121-137140 Msa1378840:intron 40.0%
TATGCCAGTGTTGTCAATCG+CGG - tig0020189:133651-133670 Msa1378840:intron 45.0%
TCATCCAAAGCCCCTATTAC+CGG - tig0020189:134135-134154 Msa1378840:CDS 45.0%
GGTAAAAGTAGGGAGCGATT+TGG + tig0020189:134425-134444 None:intergenic 45.0%
! ATTTGTGCCTCATTGACTGG+AGG + tig0020189:134798-134817 None:intergenic 45.0%
! GCACCTTTGATCTGAAGTGT+CGG + tig0020189:135084-135103 None:intergenic 45.0%
! TGTGTCGACATATCGGTATC+AGG + tig0020189:135108-135127 None:intergenic 45.0%
! AATCAAGGTTTTCGCCTCTG+GGG - tig0020189:135393-135412 Msa1378840:intron 45.0%
GTGCCATGAGATGAATGTCA+AGG - tig0020189:135630-135649 Msa1378840:intron 45.0%
! TGGCCTTGACATTCATCTCA+TGG + tig0020189:135636-135655 None:intergenic 45.0%
CACTTCAGCAAAGGGATGAT+TGG - tig0020189:135671-135690 Msa1378840:intron 45.0%
CTACTGTCAATGTCTCCAAC+TGG - tig0020189:136114-136133 Msa1378840:intron 45.0%
GTGATGACCATTCGATGGTT+TGG + tig0020189:136183-136202 None:intergenic 45.0%
AAATGTTAACGAGTGCCCCT+GGG + tig0020189:136342-136361 None:intergenic 45.0%
AAAATGTTAACGAGTGCCCC+TGG + tig0020189:136343-136362 None:intergenic 45.0%
TACTTTACGAGAGCGAGAGA+AGG - tig0020189:136613-136632 Msa1378840:intron 45.0%
GTTCTTAAATGGATCACGCG+TGG - tig0020189:136702-136721 Msa1378840:intron 45.0%
CTCTTGTAGCTCTTCCAATG+TGG - tig0020189:136824-136843 Msa1378840:intron 45.0%
CTTCCAATGTGGAAACACTC+TGG - tig0020189:136868-136887 Msa1378840:intron 45.0%
ATGAGTGGATGAGATTCCAC+TGG + tig0020189:137106-137125 None:intergenic 45.0%
TTTCACTGGACATGGTGAAG+TGG + tig0020189:137185-137204 None:intergenic 45.0%
CTTCACCATGTCCAGTGAAA+AGG - tig0020189:137185-137204 Msa1378840:intron 45.0%
CATGTCCAGTGAAAAGGACA+CGG - tig0020189:137191-137210 Msa1378840:intron 45.0%
ATGTCCAGTGAAAAGGACAC+GGG - tig0020189:137192-137211 Msa1378840:intron 45.0%
!!! TTATTTTGATAATAAATAAA+AGG + tig0020189:136366-136385 None:intergenic 5.0%
!! AATAATTTGAAAATATATAA+TGG + tig0020189:137239-137258 None:intergenic 5.0%
CTATCCGCGATTGACAACAC+TGG + tig0020189:133658-133677 None:intergenic 50.0%
! GAATTCAAGGCGTGCTGTTC+AGG - tig0020189:133843-133862 Msa1378840:intron 50.0%
AACTGTTGCGCGATACTGCA+CGG - tig0020189:134215-134234 Msa1378840:CDS 50.0%
!! GCATTGGCTTGTAGTTCCGT+TGG - tig0020189:134323-134342 Msa1378840:CDS 50.0%
CACCATACAGAAGCCGAAGA+GGG - tig0020189:134398-134417 Msa1378840:intron 50.0%
TGCTGTTGAGCAACCATCGT+TGG - tig0020189:134541-134560 Msa1378840:intron 50.0%
!! GACAGGCTCTGGAAACCATT+AGG + tig0020189:134744-134763 None:intergenic 50.0%
GAGTCTTCTTTGACAGGCTC+TGG + tig0020189:134755-134774 None:intergenic 50.0%
CAGTTCTCCTCCAGTCAATG+AGG - tig0020189:134788-134807 Msa1378840:intron 50.0%
!! GAAGTGTCGGTGCTACGTAT+AGG + tig0020189:135071-135090 None:intergenic 50.0%
! GCACCGACACTTCAGATCAA+AGG - tig0020189:135078-135097 Msa1378840:intron 50.0%
TGCAGACACAATCGCGGTTA+TGG + tig0020189:135372-135391 None:intergenic 50.0%
ATGTCAAGGCCATTGACCTC+TGG - tig0020189:135644-135663 Msa1378840:intron 50.0%
AAGTGCAGACCAGAGGTCAA+TGG + tig0020189:135656-135675 None:intergenic 50.0%
TTTGCTGAAGTGCAGACCAG+AGG + tig0020189:135663-135682 None:intergenic 50.0%
TCTGGTCTGCACTTCAGCAA+AGG - tig0020189:135662-135681 Msa1378840:intron 50.0%
CTGGTCTGCACTTCAGCAAA+GGG - tig0020189:135663-135682 Msa1378840:intron 50.0%
GTGTAGACTTGGGTTCCAGT+CGG + tig0020189:136027-136046 None:intergenic 50.0%
ACTGGAACCCAAGTCTACAC+TGG - tig0020189:136027-136046 Msa1378840:intron 50.0%
AATGTTAACGAGTGCCCCTG+GGG + tig0020189:136341-136360 None:intergenic 50.0%
! GCACCAGAGTGTTTCCACAT+TGG + tig0020189:136874-136893 None:intergenic 50.0%
TGGACTCTCCAGTCATTGGA+GGG + tig0020189:137086-137105 None:intergenic 50.0%
! CGTGTCCTTTTCACTGGACA+TGG + tig0020189:137193-137212 None:intergenic 50.0%
! AAGGCGTGCTGTTCAGGTTC+TGG - tig0020189:133849-133868 Msa1378840:intron 55.0%
!! GGGGCTTTGGATGATCCAAC+TGG + tig0020189:134129-134148 None:intergenic 55.0%
GTTGCCGGTAATAGGGGCTT+TGG + tig0020189:134142-134161 None:intergenic 55.0%
GTGCAGTATCGCGCAACAGT+TGG + tig0020189:134216-134235 None:intergenic 55.0%
ACTGTTGCGCGATACTGCAC+GGG - tig0020189:134216-134235 Msa1378840:CDS 55.0%
GCACCATACAGAAGCCGAAG+AGG - tig0020189:134397-134416 Msa1378840:intron 55.0%
GACCCTCTTCGGCTTCTGTA+TGG + tig0020189:134403-134422 None:intergenic 55.0%
! GGAGCGATTTGGACCCTCTT+CGG + tig0020189:134414-134433 None:intergenic 55.0%
CATCCACATCCATCTGGCCT+TGG - tig0020189:134596-134615 Msa1378840:intron 55.0%
ACATGAGGACCAAGGCCAGA+TGG + tig0020189:134608-134627 None:intergenic 55.0%
! CAAGGGGTACATGAGGACCA+AGG + tig0020189:134616-134635 None:intergenic 55.0%
TGAGCCGTTTGTGGGTGTGT+GGG + tig0020189:135250-135269 None:intergenic 55.0%
ATGAGCCGTTTGTGGGTGTG+TGG + tig0020189:135251-135270 None:intergenic 55.0%
!!! TTTCGCCTCTGGGGCTTTTG+TGG - tig0020189:135402-135421 Msa1378840:intron 55.0%
ACTCTCCAGTCATTGGAGGG+GGG + tig0020189:137083-137102 None:intergenic 55.0%
GACTCTCCAGTCATTGGAGG+GGG + tig0020189:137084-137103 None:intergenic 55.0%
GGACTCTCCAGTCATTGGAG+GGG + tig0020189:137085-137104 None:intergenic 55.0%
CTGGACTCTCCAGTCATTGG+AGG + tig0020189:137087-137106 None:intergenic 55.0%
CCACTGGACTCTCCAGTCAT+TGG + tig0020189:137090-137109 None:intergenic 55.0%
CCAATGACTGGAGAGTCCAG+TGG - tig0020189:137087-137106 Msa1378840:intron 55.0%
! CTCTCCCGTGTCCTTTTCAC+TGG + tig0020189:137199-137218 None:intergenic 55.0%
TTGCGCGATACTGCACGGGA+TGG - tig0020189:134220-134239 Msa1378840:CDS 60.0%
GGACCAAGGCCAGATGGATG+TGG + tig0020189:134602-134621 None:intergenic 60.0%
AGCCGTTTGTGGGTGTGTGG+GGG + tig0020189:135248-135267 None:intergenic 60.0%
GAGCCGTTTGTGGGTGTGTG+GGG + tig0020189:135249-135268 None:intergenic 60.0%
TTTAACGAGTGCCCCTCCCC+AGG - tig0020189:136322-136341 Msa1378840:intron 60.0%
TTAACGAGTGCCCCTCCCCA+GGG - tig0020189:136323-136342 Msa1378840:intron 60.0%
TTAACGAGTGCCCCTGGGGA+GGG + tig0020189:136337-136356 None:intergenic 60.0%
TTGGAGGGGGGTCTGTTTGC+TGG + tig0020189:137071-137090 None:intergenic 60.0%
ACAGACCCCCCTCCAATGAC+TGG - tig0020189:137075-137094 Msa1378840:intron 60.0%
CGCGATACTGCACGGGATGG+AGG - tig0020189:134223-134242 Msa1378840:CDS 65.0%
TTTGTGGGTGTGTGGGGGGG+GGG + tig0020189:135243-135262 None:intergenic 65.0%
GTTTGTGGGTGTGTGGGGGG+GGG + tig0020189:135244-135263 None:intergenic 65.0%
CGTTTGTGGGTGTGTGGGGG+GGG + tig0020189:135245-135264 None:intergenic 65.0%
CCGTTTGTGGGTGTGTGGGG+GGG + tig0020189:135246-135265 None:intergenic 65.0%
CCCCCCCACACACCCACAAA+CGG - tig0020189:135243-135262 Msa1378840:intron 65.0%
GCCGTTTGTGGGTGTGTGGG+GGG + tig0020189:135247-135266 None:intergenic 65.0%
CGACGCCACAAAAGCCCCAG+AGG + tig0020189:135410-135429 None:intergenic 65.0%
AGGTCCTCGAAGACGCCGAC+TGG - tig0020189:136009-136028 Msa1378840:intron 65.0%
GGTTCCAGTCGGCGTCTTCG+AGG + tig0020189:136016-136035 None:intergenic 65.0%
TAACGAGTGCCCCTCCCCAG+GGG - tig0020189:136324-136343 Msa1378840:intron 65.0%
TAACGAGTGCCCCTGGGGAG+GGG + tig0020189:136336-136355 None:intergenic 65.0%
GTTAACGAGTGCCCCTGGGG+AGG + tig0020189:136338-136357 None:intergenic 65.0%
TTGTGGGTGTGTGGGGGGGG+GGG + tig0020189:135242-135261 None:intergenic 70.0%
TGTGGGTGTGTGGGGGGGGG+GGG + tig0020189:135241-135260 None:intergenic 75.0%
! TGGGTGTGTGGGGGGGGGGG+GGG + tig0020189:135239-135258 None:intergenic 80.0%
! GTGGGTGTGTGGGGGGGGGG+GGG + tig0020189:135240-135259 None:intergenic 80.0%
! TGTGTGGGGGGGGGGGGGGG+GGG + tig0020189:135235-135254 None:intergenic 85.0%
! GTGTGTGGGGGGGGGGGGGG+GGG + tig0020189:135236-135255 None:intergenic 85.0%
! GGTGTGTGGGGGGGGGGGGG+GGG + tig0020189:135237-135256 None:intergenic 85.0%
! GGGTGTGTGGGGGGGGGGGG+GGG + tig0020189:135238-135257 None:intergenic 85.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + tig0020189:135233-135252 None:intergenic 90.0%
! GTGTGGGGGGGGGGGGGGGG+GGG + tig0020189:135234-135253 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
tig0020189 gene 132885 137471 132885 ID=Msa1378840;Name=Msa1378840
tig0020189 mRNA 132885 137471 132885 ID=Msa1378840-mRNA-1;Parent=Msa1378840;Name=Msa1378840-mRNA-1;_AED=0.34;_eAED=0.34;_QI=127|1|1|1|0.83|0.71|7|154|280
tig0020189 exon 132885 132982 132885 ID=Msa1378840-mRNA-1:exon:6224;Parent=Msa1378840-mRNA-1
tig0020189 exon 134062 134403 134062 ID=Msa1378840-mRNA-1:exon:6223;Parent=Msa1378840-mRNA-1
tig0020189 exon 134646 134795 134646 ID=Msa1378840-mRNA-1:exon:6222;Parent=Msa1378840-mRNA-1
tig0020189 exon 135524 135600 135524 ID=Msa1378840-mRNA-1:exon:6221;Parent=Msa1378840-mRNA-1
tig0020189 exon 135677 135817 135677 ID=Msa1378840-mRNA-1:exon:6220;Parent=Msa1378840-mRNA-1
tig0020189 exon 136468 136545 136468 ID=Msa1378840-mRNA-1:exon:6219;Parent=Msa1378840-mRNA-1
tig0020189 exon 137234 137471 137234 ID=Msa1378840-mRNA-1:exon:6218;Parent=Msa1378840-mRNA-1
tig0020189 five_prime_UTR 137345 137471 137345 ID=Msa1378840-mRNA-1:five_prime_utr;Parent=Msa1378840-mRNA-1
tig0020189 CDS 137234 137344 137234 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 CDS 136468 136545 136468 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 CDS 135677 135817 135677 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 CDS 135524 135600 135524 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 CDS 134646 134795 134646 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 CDS 134118 134403 134118 ID=Msa1378840-mRNA-1:cds;Parent=Msa1378840-mRNA-1
tig0020189 three_prime_UTR 134062 134117 134062 ID=Msa1378840-mRNA-1:three_prime_utr;Parent=Msa1378840-mRNA-1
tig0020189 three_prime_UTR 132885 132982 132885 ID=Msa1378840-mRNA-1:three_prime_utr;Parent=Msa1378840-mRNA-1
Gene Sequence

>Msa1378840

ATGGTAGGACCAATAAGGCCTCAAATTGTGTTGTTTGGTTCTTCCATTGTTCAACTTAGTTATAGTGATGAAGGTTGGGGATCTATTCTTACAAACTTGTATTCTCGCAAGGCAGATATAATTTTGAGAGGATACTGTGGTTGGAATTCAAGGCGTGCTGTTCAGGTTCTGGATACAATATTTCCCAAGAATGCTGTTGAGCAACCATCGTTGGTTATTGTGTACTTTGGTGGCAATGATTCTATTCATCCACATCCATCTGGCCTTGGTCCTCATGTACCCCTTGAAGAATACAGAGAAAATATGAAGAAGATTATTATCCATCTTAAGAGCCTGTCAAAGAAGACTCGCATAATATTGCTCAGTTCTCCTCCAGTCAATGAGGCACAAATTCACGAAACATTCAGTAATATATTGGGACCACTAAAGAGGACAAATGAATCCTGTAGACTATATTCAGAAGCATGTTTGGACTTGTGCCATGAGATGAATGTCAAGGCCATTGACCTCTGGTCTGCACTTCAGCAAAGGGATGATTGGTCCGATGTTTGCTTCACGGATGGAATTCATTTGTCACATGAGGGTAGCAAGATAGTTGTGAAAGAGATATTGAAGGTCCTCGAAGACGCCGACTGGAACCCAAGTCTACACTGGAAATCAATGCCAAATGAGTTTGCAGAAGATTCGCCATATGATCCAGTTGCTATAGATGAAAAGACTACTGTCAATGTCTCCAACTGGAACTTCCAGAAACATTTTGAATGGGAAAAAGCGTTGTGCATTTCCAAACCATCGAATGGTCATCACCAATTTGAAGAATCAGCTGTCACAAACTATAACTGA

Protein sequence

>Msa1378840

MVGPIRPQIVLFGSSIVQLSYSDEGWGSILTNLYSRKADIILRGYCGWNSRRAVQVLDTIFPKNAVEQPSLVIVYFGGNDSIHPHPSGLGPHVPLEEYRENMKKIIIHLKSLSKKTRIILLSSPPVNEAQIHETFSNILGPLKRTNESCRLYSEACLDLCHEMNVKAIDLWSALQQRDDWSDVCFTDGIHLSHEGSKIVVKEILKVLEDADWNPSLHWKSMPNEFAEDSPYDPVAIDEKTTVNVSNWNFQKHFEWEKALCISKPSNGHHQFEESAVTNYN*