AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1438780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1438780 MtrunA17_Chr4g0000231 91.975 324 24 2 80 402 70 392 0.0 596
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1438780 AT1G78915.1 61.579 380 119 6 31 402 24 384 7.69e-158 450
Msa1438780 AT1G78915.2 58.942 397 119 6 31 402 24 401 8.15e-155 443
Msa1438780 AT1G78915.3 58.500 400 119 6 31 402 24 404 4.54e-154 441

Find 100 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTACAGACATTGACTTTC+AGG 0.158053 tig0028625:-9269 Msa1438780:CDS
TCTACTTAATGGGGAAATAT+TGG 0.211630 tig0028625:+4994 None:intergenic
TAGCTATTCTATATGTAATT+AGG 0.225164 tig0028625:-4837 Msa1438780:three_prime_UTR
ACTCAGGTTGAATTACTTCT+AGG 0.252470 tig0028625:-5842 Msa1438780:intron
ACATATTGCTTCTACTTAAT+GGG 0.255148 tig0028625:+4984 None:intergenic
GATGAGGAATTTACTTGAAT+TGG 0.261760 tig0028625:+7065 None:intergenic
AACGCCTCAACGCTATTAAA+AGG 0.279505 tig0028625:-9246 Msa1438780:intron
GGTGTAGCTGTTGCAGTCTT+TGG 0.285392 tig0028625:-9004 Msa1438780:CDS
ACAAACCTCATCTGGCTTCT+TGG 0.302807 tig0028625:+7378 None:intergenic
GCAGAAGAGAATAAACAATT+TGG 0.307313 tig0028625:-9109 Msa1438780:CDS
ACGAGTGCTTTAGCTTTATC+TGG 0.312842 tig0028625:+5156 None:intergenic
ACAGGCTGTTCAATTACTTT+TGG 0.317877 tig0028625:-7165 Msa1438780:intron
CGAAAAGCATCAGCATCATT+TGG 0.321295 tig0028625:+7887 None:intergenic
CCCAACAGACTCACAGAAAC+TGG 0.323792 tig0028625:-7090 Msa1438780:CDS
GATTCAAATTCTCGTGGCTT+CGG 0.341328 tig0028625:-9625 Msa1438780:CDS
GAAGGATAAAGCTGCTCTTC+AGG 0.342872 tig0028625:-8751 Msa1438780:intron
CGAGAGCAGTTGGATCTCTT+GGG 0.359823 tig0028625:+8406 None:intergenic
TTTATTATTATTCTTCGAAC+CGG 0.373543 tig0028625:+9658 None:intergenic
CCAGTTTCTGTGAGTCTGTT+GGG 0.375083 tig0028625:+7090 None:intergenic
CTTGGCAGCAAGTAATGAAT+TGG 0.375532 tig0028625:+7396 None:intergenic
TTTGCTACCAAGGTTGGAAT+AGG 0.376986 tig0028625:-9025 Msa1438780:CDS
TCGAGAGCAGTTGGATCTCT+TGG 0.385657 tig0028625:+8405 None:intergenic
AAATATCCACGAAAATCATC+AGG 0.401839 tig0028625:+5749 None:intergenic
GACTCTGAAGAAATAGAAAT+AGG 0.409395 tig0028625:+9067 None:intergenic
TATCTTGACATTGATTATGA+TGG 0.412021 tig0028625:-5109 Msa1438780:three_prime_UTR
ATATTACGAGACCGGTAGTA+TGG 0.422009 tig0028625:-9876 None:intergenic
TCCAGTTTCTGTGAGTCTGT+TGG 0.426571 tig0028625:+7089 None:intergenic
ACCACAGCACTGTCTTGGTT+GGG 0.439621 tig0028625:+8792 None:intergenic
TCAAGATGACAAACCTCATC+TGG 0.444561 tig0028625:+7370 None:intergenic
ATCAAATTTGAAGTTCTTCG+TGG 0.449209 tig0028625:-7424 Msa1438780:CDS
CTAGGAGACTGTTTGGTGGA+TGG 0.451140 tig0028625:+9403 None:intergenic
GAGTCAGACAACAAAACAAT+TGG 0.459047 tig0028625:-9049 Msa1438780:CDS
ATACTTACTAGGAGACTGTT+TGG 0.459147 tig0028625:+9396 None:intergenic
ATTGGCTTTGCTACCAAGGT+TGG 0.459444 tig0028625:-9031 Msa1438780:CDS
GACCACAGCACTGTCTTGGT+TGG 0.464901 tig0028625:+8791 None:intergenic
AATTCTCGTGGCTTCGGAGG+AGG 0.473229 tig0028625:-9619 Msa1438780:CDS
TTGCAACGGTGGTTTGCTCC+CGG 0.476590 tig0028625:-9677 Msa1438780:CDS
TCAGGGAGCTGCAGTAACTT+TGG 0.477449 tig0028625:-8316 Msa1438780:intron
TCAAGTAGAGAAGCAGCTCT+TGG 0.479567 tig0028625:+8276 None:intergenic
AATCTGGCAGAGTAGGCTTA+AGG 0.480849 tig0028625:-8454 Msa1438780:intron
CATTGACCACAGCACTGTCT+TGG 0.489183 tig0028625:+8787 None:intergenic
TAGGGAAAGCCTATTCAGAC+TGG 0.489372 tig0028625:-5823 Msa1438780:CDS
CTCAGGTTGAATTACTTCTA+GGG 0.491519 tig0028625:-5841 Msa1438780:intron
TATGAACTCAAAGATTATGA+AGG 0.497167 tig0028625:-7845 Msa1438780:CDS
TCATTGATTCATTCGTGATG+TGG 0.505265 tig0028625:-9738 Msa1438780:exon
ATAGGTGCATCATAGTCAAT+TGG 0.505813 tig0028625:+9085 None:intergenic
AACAATTGGCTTTGCTACCA+AGG 0.510682 tig0028625:-9035 Msa1438780:CDS
TCACGAATGAATCAATGATA+AGG 0.510751 tig0028625:+9743 None:intergenic
CTTTCTGTGAATCTGCAGTA+AGG 0.512475 tig0028625:+5024 None:intergenic
TTACTTACTTCGAGAGCAGT+TGG 0.515659 tig0028625:+8396 None:intergenic
TCCCCATTAAGTAGAAGCTA+TGG 0.525348 tig0028625:-4890 Msa1438780:intron
GACGTGGCCCCAGTCTGAAT+AGG 0.528789 tig0028625:+5814 None:intergenic
TGAACTCAGACGCTCACGGC+AGG 0.532174 tig0028625:+7142 None:intergenic
GTCAGCACTTGAGCAAAAGA+AGG 0.534318 tig0028625:-9131 Msa1438780:CDS
TAAGCTATTATCTTGAATAA+CGG 0.535544 tig0028625:+5130 None:intergenic
TGTGAGGTTAAAAGCGGTGC+CGG 0.542657 tig0028625:+9298 None:intergenic
ATGTATACCTACCTTCCTGA+TGG 0.543835 tig0028625:+8953 None:intergenic
AGCTACACCTATTCCAACCT+TGG 0.544276 tig0028625:+9018 None:intergenic
GCAGTAACTTTGGCAGAACT+AGG 0.548651 tig0028625:-8306 Msa1438780:CDS
TGCTCGGATTCAAATTCTCG+TGG 0.550601 tig0028625:-9631 Msa1438780:CDS
GAATCTGCAGTAAGGAAAAG+AGG 0.553510 tig0028625:+5032 None:intergenic
CATATTGCTTCTACTTAATG+GGG 0.569103 tig0028625:+4985 None:intergenic
GAGCTGATCGTAAATAGCTA+TGG 0.571334 tig0028625:+5784 None:intergenic
TGCAACTGCAATTGCAACGG+TGG 0.574392 tig0028625:-9688 Msa1438780:CDS
GAGAGCAGTTGGATCTCTTG+GGG 0.577307 tig0028625:+8407 None:intergenic
CAGCAAGTAATGAATTGGTA+AGG 0.579172 tig0028625:+7401 None:intergenic
TTATTATTATTCTTCGAACC+GGG 0.579174 tig0028625:+9659 None:intergenic
TCTACTTGATGATTTGACAA+AGG 0.581273 tig0028625:-8262 Msa1438780:intron
ATGAACTCAAAGATTATGAA+GGG 0.581446 tig0028625:-7844 Msa1438780:CDS
AGGGAAAGCCTATTCAGACT+GGG 0.584128 tig0028625:-5822 Msa1438780:CDS
CTTACTAGGAGACTGTTTGG+TGG 0.586512 tig0028625:+9399 None:intergenic
TGCATATAAAAGTTCAGCAA+AGG 0.587863 tig0028625:-7813 Msa1438780:intron
TACGAGACCGGTAGTATGGA+TGG 0.590133 tig0028625:-9872 Msa1438780:five_prime_UTR
TCACTACTACATTAAACAGA+AGG 0.592643 tig0028625:-9777 Msa1438780:five_prime_UTR
GATGGTATAAGCGGGAGGAG+AGG 0.596546 tig0028625:-9854 Msa1438780:five_prime_UTR
CAATGATAAATTGTCAGAGA+AGG 0.596868 tig0028625:-8769 Msa1438780:CDS
AACTGCAACTGCAATTGCAA+CGG 0.596961 tig0028625:-9691 Msa1438780:CDS
TCAAATTCTCGTGGCTTCGG+AGG 0.598502 tig0028625:-9622 Msa1438780:CDS
GCTTATACCATCCATACTAC+CGG 0.598795 tig0028625:+9865 None:intergenic
ATGTGTCCATATTACGAGAC+CGG 0.605355 tig0028625:-9884 None:intergenic
GTAGTATGGATGGTATAAGC+GGG 0.607944 tig0028625:-9862 Msa1438780:five_prime_UTR
TACTACATTAAACAGAAGGA+AGG 0.616468 tig0028625:-9773 Msa1438780:five_prime_UTR
TGCTGCCAAGAAGCCAGATG+AGG 0.617724 tig0028625:-7383 Msa1438780:intron
ACATTAAACAGAAGGAAGGA+AGG 0.620796 tig0028625:-9769 Msa1438780:five_prime_UTR
AGATAAAGCTAAAGCACTCG+TGG 0.621295 tig0028625:-5154 Msa1438780:CDS
TGTATACCTACCTTCCTGAT+GGG 0.622172 tig0028625:+8954 None:intergenic
GTTGCAGTTGATGCTTCCGA+TGG 0.624179 tig0028625:+9705 None:intergenic
GGTAGTATGGATGGTATAAG+CGG 0.635190 tig0028625:-9863 Msa1438780:five_prime_UTR
ATGTGGACTGCAATGTCCAT+CGG 0.648596 tig0028625:-9721 Msa1438780:CDS
AATATCCACGAAAATCATCA+GGG 0.664165 tig0028625:+5750 None:intergenic
GTATGGATGGTATAAGCGGG+AGG 0.674497 tig0028625:-9859 Msa1438780:five_prime_UTR
CTTCTGAACTCAGACGCTCA+CGG 0.675199 tig0028625:+7138 None:intergenic
TCAACCTGTGAGGTTAAAAG+CGG 0.675885 tig0028625:+9292 None:intergenic
GGGAAAGCCTATTCAGACTG+GGG 0.676546 tig0028625:-5821 Msa1438780:CDS
GTCTGTAGCATCAACCTGTG+AGG 0.684258 tig0028625:+9282 None:intergenic
TATTCAGACTGGGGCCACGT+CGG 0.685550 tig0028625:-5812 Msa1438780:CDS
AATGTAGTAGTGACATGACA+TGG 0.686230 tig0028625:+9787 None:intergenic
AAAACATTGGAGATGCTGAG+AGG 0.689706 tig0028625:-5355 Msa1438780:CDS
TCCCAACCAAGACAGTGCTG+TGG 0.696430 tig0028625:-8793 Msa1438780:CDS
TAGCTATGGCATCACCGACG+TGG 0.718295 tig0028625:+5798 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAAAAAATTGCT+CGG - tig0028625:5033-5052 Msa1438780:three_prime_UTR 10.0%
!! ATTAATTAATTATTCTTTCT+AGG - tig0028625:5527-5546 Msa1438780:intron 10.0%
!!! TTTGTGAAAAAAATATTTTT+AGG + tig0028625:7748-7767 None:intergenic 10.0%
!!! TCATTTCTTTTATTTATTTT+TGG - tig0028625:7859-7878 Msa1438780:CDS 10.0%
!!! GATACTTTTCAATAAATAAT+AGG + tig0028625:6475-6494 None:intergenic 15.0%
!! TAATGTTATCCATAAATATT+TGG - tig0028625:7208-7227 Msa1438780:intron 15.0%
!!! TTCTTTTATTTATTTTTGGT+TGG - tig0028625:7863-7882 Msa1438780:CDS 15.0%
!!! TCTTTTATTTATTTTTGGTT+GGG - tig0028625:7864-7883 Msa1438780:CDS 15.0%
!!! TACATAAACTTAATTTTCTT+AGG - tig0028625:8735-8754 Msa1438780:intron 15.0%
!! ATCTCTAAACTAAAAAACTT+TGG + tig0028625:4860-4879 None:intergenic 20.0%
!! TTTATTATTATTCTTCGAAC+CGG + tig0028625:5025-5044 None:intergenic 20.0%
!! TATTTATTTATTTGTAGAGC+CGG - tig0028625:5363-5382 Msa1438780:CDS 20.0%
!!! AGTGTAATGCTTAAATTTTA+AGG + tig0028625:6165-6184 None:intergenic 20.0%
!! AATATATATTTCCTGAAATC+TGG - tig0028625:6210-6229 Msa1438780:intron 20.0%
!! GTAATTTACTGCTAATAATT+TGG - tig0028625:6529-6548 Msa1438780:intron 20.0%
!!! TTTTGAAAGAAGATTTTAGT+CGG + tig0028625:6703-6722 None:intergenic 20.0%
!! ATATTTCATCTAAATACAGT+GGG - tig0028625:7446-7465 Msa1438780:intron 20.0%
!!! AGATATTATTCTCTTTTGTA+AGG - tig0028625:7654-7673 Msa1438780:intron 20.0%
!! TACGTTTATTGATAAAATAC+TGG + tig0028625:7891-7910 None:intergenic 20.0%
!! AAATGATATAAAATAACAGC+AGG + tig0028625:7942-7961 None:intergenic 20.0%
!!! TGAGATTTTACAGAAAAAAT+AGG + tig0028625:8218-8237 None:intergenic 20.0%
!!! TTAGAGATATTTTAAAGTGA+TGG + tig0028625:8263-8282 None:intergenic 20.0%
!!! GATTTAGTGTGTATTTTATA+AGG + tig0028625:8287-8306 None:intergenic 20.0%
!! TTAGTATAAATATGATTGCT+AGG + tig0028625:8580-8599 None:intergenic 20.0%
!!! TTATTTTTTGCGATTTTTAC+TGG + tig0028625:8607-8626 None:intergenic 20.0%
!! TTCACTAATGTATAAAGATA+AGG + tig0028625:8639-8658 None:intergenic 20.0%
!! TTTATATTATTGTGATACTC+AGG - tig0028625:8822-8841 Msa1438780:intron 20.0%
!!! GTTGATATTCTAAAACATTA+TGG - tig0028625:9237-9256 Msa1438780:intron 20.0%
!!! TATTAATATTTTGCTTTTGC+AGG - tig0028625:9281-9300 Msa1438780:CDS 20.0%
!!! ATTAATATTTTGCTTTTGCA+GGG - tig0028625:9282-9301 Msa1438780:CDS 20.0%
!!! CAATGTTTTTGTTTTCTTTT+AGG + tig0028625:9314-9333 None:intergenic 20.0%
!! CTAAAAGAAAACAAAAACAT+TGG - tig0028625:9312-9331 Msa1438780:intron 20.0%
!! TAAGCTATTATCTTGAATAA+CGG + tig0028625:9553-9572 None:intergenic 20.0%
!!! TTTTGTAATACTCTATCTAA+TGG + tig0028625:9816-9835 None:intergenic 20.0%
!! TAGCTATTCTATATGTAATT+AGG - tig0028625:9843-9862 Msa1438780:five_prime_UTR 20.0%
! TTATTATTATTCTTCGAACC+GGG + tig0028625:5024-5043 None:intergenic 25.0%
! AATTGAATTGCTTCTTTATC+AGG - tig0028625:5251-5270 Msa1438780:intron 25.0%
! TAGATAGATAGATACTTACT+AGG + tig0028625:5298-5317 None:intergenic 25.0%
!!! TGCTCTTTAATTTTTGTGTA+TGG - tig0028625:5835-5854 Msa1438780:CDS 25.0%
! AACATTTATTTCACAAGGAA+AGG + tig0028625:6030-6049 None:intergenic 25.0%
!! TATCAATGATTCTGTAGTTT+TGG + tig0028625:6191-6210 None:intergenic 25.0%
! TGTCTCTAGATATATTTGAA+AGG - tig0028625:6337-6356 Msa1438780:intron 25.0%
! GTCTCTAGATATATTTGAAA+GGG - tig0028625:6338-6357 Msa1438780:intron 25.0%
!! ATATATTTGAAAGGGTTTTC+AGG - tig0028625:6346-6365 Msa1438780:intron 25.0%
!! TATATTTGAAAGGGTTTTCA+GGG - tig0028625:6347-6366 Msa1438780:intron 25.0%
! TGACAAAGGTTAGTATTATA+TGG - tig0028625:6432-6451 Msa1438780:intron 25.0%
!!! ATTGAAAAGTATCTTCATTC+AGG - tig0028625:6482-6501 Msa1438780:intron 25.0%
!!! TTGAAAAGTATCTTCATTCA+GGG - tig0028625:6483-6502 Msa1438780:intron 25.0%
! GTTATACATTTAATCTTCTC+AGG - tig0028625:6661-6680 Msa1438780:intron 25.0%
! TATGAACTCAAAGATTATGA+AGG - tig0028625:6835-6854 Msa1438780:intron 25.0%
! ATGAACTCAAAGATTATGAA+GGG - tig0028625:6836-6855 Msa1438780:intron 25.0%
! TTCATTCTGCAATTAAGATT+GGG - tig0028625:6996-7015 Msa1438780:intron 25.0%
! TCTTAGTGATTAATTGCTTT+AGG - tig0028625:7170-7189 Msa1438780:intron 25.0%
! TAGGATCAACCAAATATTTA+TGG + tig0028625:7220-7239 None:intergenic 25.0%
!!! AATCATCAGATTTTGCTATA+CGG - tig0028625:7402-7421 Msa1438780:CDS 25.0%
! CATATTTCATCTAAATACAG+TGG - tig0028625:7445-7464 Msa1438780:intron 25.0%
! TATTCAATTCTTTCTTCAAC+AGG - tig0028625:7497-7516 Msa1438780:intron 25.0%
! TATCAATAAACGTATCAGTT+AGG - tig0028625:7897-7916 Msa1438780:intron 25.0%
! GTAAACCTATAAATCTAACA+TGG + tig0028625:8028-8047 None:intergenic 25.0%
!!! ACTATCAAGGTTTTAATTTG+CGG - tig0028625:8059-8078 Msa1438780:intron 25.0%
!!! TGAATCTTTTGTTTTGCTTT+CGG - tig0028625:8679-8698 Msa1438780:intron 25.0%
!! GACAAAATGTTTTCTATGAA+AGG + tig0028625:8765-8784 None:intergenic 25.0%
!!! TTAGTGTTATTTACAGTTCA+TGG + tig0028625:9172-9191 None:intergenic 25.0%
! ACAGTCATCAATCTAAATTT+AGG + tig0028625:9429-9448 None:intergenic 25.0%
!! TAAATTTAGATTGATGACTG+TGG - tig0028625:9428-9447 Msa1438780:intron 25.0%
!! TATCTTGACATTGATTATGA+TGG - tig0028625:9571-9590 Msa1438780:CDS 25.0%
! ACATATTGCTTCTACTTAAT+GGG + tig0028625:9699-9718 None:intergenic 25.0%
!!! TATTTTAATTGGAAGTTCGT+TGG + tig0028625:9869-9888 None:intergenic 25.0%
TCACTACTACATTAAACAGA+AGG - tig0028625:4903-4922 Msa1438780:intron 30.0%
TACTACATTAAACAGAAGGA+AGG - tig0028625:4907-4926 Msa1438780:intron 30.0%
TCACGAATGAATCAATGATA+AGG + tig0028625:4940-4959 None:intergenic 30.0%
GCAGAAGAGAATAAACAATT+TGG - tig0028625:5571-5590 Msa1438780:intron 30.0%
! GACTCTGAAGAAATAGAAAT+AGG + tig0028625:5616-5635 None:intergenic 30.0%
CATGTAAATGAACATGATGA+GGG + tig0028625:5817-5836 None:intergenic 30.0%
! TTTTTGTGTATGGTTGAAAC+TGG - tig0028625:5845-5864 Msa1438780:intron 30.0%
CAATGATAAATTGTCAGAGA+AGG - tig0028625:5911-5930 Msa1438780:intron 30.0%
ACAAGGAAAGGAAACAAAAT+AGG + tig0028625:6018-6037 None:intergenic 30.0%
CAGTGAACATTTATTTCACA+AGG + tig0028625:6035-6054 None:intergenic 30.0%
! TCTACTTGATGATTTGACAA+AGG - tig0028625:6418-6437 Msa1438780:intron 30.0%
!! TGAAAAGTATCTTCATTCAG+GGG - tig0028625:6484-6503 Msa1438780:intron 30.0%
! AGGGGATTTATTTCTTATGT+AGG - tig0028625:6502-6521 Msa1438780:intron 30.0%
CAATCTCTAATTACAATGCA+GGG + tig0028625:6629-6648 None:intergenic 30.0%
ACAATCTCTAATTACAATGC+AGG + tig0028625:6630-6649 None:intergenic 30.0%
TGCATATAAAAGTTCAGCAA+AGG - tig0028625:6867-6886 Msa1438780:intron 30.0%
!!! ACGACTTCAAACACTTTTTT+TGG - tig0028625:6902-6921 Msa1438780:intron 30.0%
!!! CGACTTCAAACACTTTTTTT+GGG - tig0028625:6903-6922 Msa1438780:intron 30.0%
AAACAGCTGTCAAAACTAAA+TGG - tig0028625:6936-6955 Msa1438780:intron 30.0%
GTTCATTCTGCAATTAAGAT+TGG - tig0028625:6995-7014 Msa1438780:intron 30.0%
! AACCAGAGTTTAAAACTGTA+GGG - tig0028625:7121-7140 Msa1438780:CDS 30.0%
AATATTTGGTTGATCCTAAC+AGG - tig0028625:7222-7241 Msa1438780:intron 30.0%
! ATCAAATTTGAAGTTCTTCG+TGG - tig0028625:7256-7275 Msa1438780:intron 30.0%
CTTCATATGAATGTGCTATA+CGG - tig0028625:7342-7361 Msa1438780:intron 30.0%
ACTAAGATAAGAAACCAGAA+TGG + tig0028625:7368-7387 None:intergenic 30.0%
GATGAGGAATTTACTTGAAT+TGG + tig0028625:7618-7637 None:intergenic 30.0%
TGTTCACTTTCAAAATGATG+AGG + tig0028625:7634-7653 None:intergenic 30.0%
CAGGATACTTTCAATATGTT+GGG - tig0028625:7820-7839 Msa1438780:CDS 30.0%
CAATAATGAAAACACAAAGG+GGG + tig0028625:7991-8010 None:intergenic 30.0%
GCAATAATGAAAACACAAAG+GGG + tig0028625:7992-8011 None:intergenic 30.0%
GGCAATAATGAAAACACAAA+GGG + tig0028625:7993-8012 None:intergenic 30.0%
! TTTCATTATTGCCGTTTCAT+TGG - tig0028625:8000-8019 Msa1438780:intron 30.0%
TGGTACCATGTTAGATTTAT+AGG - tig0028625:8020-8039 Msa1438780:intron 30.0%
ATTTATAGGTTTACCGAAGA+AGG - tig0028625:8034-8053 Msa1438780:intron 30.0%
ATGGATACTTATTGTTTCCA+GGG + tig0028625:8512-8531 None:intergenic 30.0%
TATGGATACTTATTGTTTCC+AGG + tig0028625:8513-8532 None:intergenic 30.0%
CATAAAGGAGTAGTAGTTTA+TGG + tig0028625:8531-8550 None:intergenic 30.0%
AACTACTACTCCTTTATGAT+CGG - tig0028625:8533-8552 Msa1438780:intron 30.0%
!!! GAATCTTTTGTTTTGCTTTC+GGG - tig0028625:8680-8699 Msa1438780:intron 30.0%
!!! AATCTTTTGTTTTGCTTTCG+GGG - tig0028625:8681-8700 Msa1438780:intron 30.0%
AATATCCACGAAAATCATCA+GGG + tig0028625:8933-8952 None:intergenic 30.0%
AAATATCCACGAAAATCATC+AGG + tig0028625:8934-8953 None:intergenic 30.0%
CATGGTTAGTGATTAAATGA+GGG + tig0028625:8975-8994 None:intergenic 30.0%
GAAAAGAAATGATAACTCCA+TGG + tig0028625:8993-9012 None:intergenic 30.0%
TGCGAATCAAATTGAAGAAA+AGG - tig0028625:9015-9034 Msa1438780:CDS 30.0%
ACACTAATTTCACAAAATCG+AGG - tig0028625:9185-9204 Msa1438780:intron 30.0%
TCTACTTAATGGGGAAATAT+TGG + tig0028625:9689-9708 None:intergenic 30.0%
CATATTGCTTCTACTTAATG+GGG + tig0028625:9698-9717 None:intergenic 30.0%
GACATATTGCTTCTACTTAA+TGG + tig0028625:9700-9719 None:intergenic 30.0%
TCTACTTAATGGGGAAATAT+TGG + tig0028625:9689-9708 None:intergenic 30.0%
AATGTAGTAGTGACATGACA+TGG + tig0028625:4896-4915 None:intergenic 35.0%
ACATTAAACAGAAGGAAGGA+AGG - tig0028625:4911-4930 Msa1438780:intron 35.0%
!! TCATTGATTCATTCGTGATG+TGG - tig0028625:4942-4961 Msa1438780:intron 35.0%
ATACTTACTAGGAGACTGTT+TGG + tig0028625:5287-5306 None:intergenic 35.0%
! CAAACCTTTTAATAGCGTTG+AGG + tig0028625:5441-5460 None:intergenic 35.0%
ATAGGTGCATCATAGTCAAT+TGG + tig0028625:5598-5617 None:intergenic 35.0%
GAGTCAGACAACAAAACAAT+TGG - tig0028625:5631-5650 Msa1438780:intron 35.0%
GCATGTAAATGAACATGATG+AGG + tig0028625:5818-5837 None:intergenic 35.0%
!! ATTTTAGTCGGAATTGCATG+AGG + tig0028625:6691-6710 None:intergenic 35.0%
!!! CTGATTTTTTTCGTGTTCCA+AGG - tig0028625:6765-6784 Msa1438780:intron 35.0%
!!! AGCATCATTTGGTTTTTCCT+TGG + tig0028625:6785-6804 None:intergenic 35.0%
!!! CTTCAAACACTTTTTTTGGG+TGG - tig0028625:6906-6925 Msa1438780:intron 35.0%
ATTCTGCAATTAAGATTGGG+TGG - tig0028625:6999-7018 Msa1438780:intron 35.0%
GTACTCATTTACAGAATAGC+TGG + tig0028625:7092-7111 None:intergenic 35.0%
! GAACCAGAGTTTAAAACTGT+AGG - tig0028625:7120-7139 Msa1438780:CDS 35.0%
GATATCTTCAGATACCTGTT+AGG + tig0028625:7239-7258 None:intergenic 35.0%
CAGCAAGTAATGAATTGGTA+AGG + tig0028625:7282-7301 None:intergenic 35.0%
! ACAGGCTGTTCAATTACTTT+TGG - tig0028625:7515-7534 Msa1438780:intron 35.0%
!! CTTTTGTAAGGTCTTGCTAT+AGG - tig0028625:7666-7685 Msa1438780:intron 35.0%
CCATGTTAAAGTTATGGTCA+TGG + tig0028625:7800-7819 None:intergenic 35.0%
CCATGACCATAACTTTAACA+TGG - tig0028625:7797-7816 Msa1438780:intron 35.0%
ATCCTGCCATGTTAAAGTTA+TGG + tig0028625:7806-7825 None:intergenic 35.0%
GCAGGATACTTTCAATATGT+TGG - tig0028625:7819-7838 Msa1438780:CDS 35.0%
CGGCAATAATGAAAACACAA+AGG + tig0028625:7994-8013 None:intergenic 35.0%
CTAACATGGTACCAATGAAA+CGG + tig0028625:8014-8033 None:intergenic 35.0%
! ACCTTGATAGTTTCCTTCTT+CGG + tig0028625:8050-8069 None:intergenic 35.0%
ACCATAATTGCATCATGATG+CGG - tig0028625:8422-8441 Msa1438780:CDS 35.0%
GTTACATCAACCGATCATAA+AGG + tig0028625:8546-8565 None:intergenic 35.0%
!! ACTCAGGTTGAATTACTTCT+AGG - tig0028625:8838-8857 Msa1438780:intron 35.0%
!! CTCAGGTTGAATTACTTCTA+GGG - tig0028625:8839-8858 Msa1438780:intron 35.0%
! TTTTCGTGGATATTTAGCCA+AGG - tig0028625:8939-8958 Msa1438780:intron 35.0%
ATGAGGGAAAATATAGACCT+TGG + tig0028625:8959-8978 None:intergenic 35.0%
CCATGGTTAGTGATTAAATG+AGG + tig0028625:8976-8995 None:intergenic 35.0%
CCTCATTTAATCACTAACCA+TGG - tig0028625:8973-8992 Msa1438780:CDS 35.0%
! TGTCGTTCCTTTTCATTTTG+TGG - tig0028625:9111-9130 Msa1438780:CDS 35.0%
! GTTCCTTTTCATTTTGTGGT+TGG - tig0028625:9115-9134 Msa1438780:CDS 35.0%
ACACCAACCACAAAATGAAA+AGG + tig0028625:9121-9140 None:intergenic 35.0%
GCTTATACCATCCATACTAC+CGG + tig0028625:4818-4837 None:intergenic 40.0%
GGTAGTATGGATGGTATAAG+CGG - tig0028625:4817-4836 Msa1438780:three_prime_UTR 40.0%
GTAGTATGGATGGTATAAGC+GGG - tig0028625:4818-4837 Msa1438780:three_prime_UTR 40.0%
AACTGCAACTGCAATTGCAA+CGG - tig0028625:4989-5008 Msa1438780:intron 40.0%
GATTCAAATTCTCGTGGCTT+CGG - tig0028625:5055-5074 Msa1438780:three_prime_UTR 40.0%
TCAACCTGTGAGGTTAAAAG+CGG + tig0028625:5391-5410 None:intergenic 40.0%
!! TGCTACAGACATTGACTTTC+AGG - tig0028625:5411-5430 Msa1438780:intron 40.0%
AACGCCTCAACGCTATTAAA+AGG - tig0028625:5434-5453 Msa1438780:intron 40.0%
!! AACAATTGGCTTTGCTACCA+AGG - tig0028625:5645-5664 Msa1438780:intron 40.0%
TTTGCTACCAAGGTTGGAAT+AGG - tig0028625:5655-5674 Msa1438780:intron 40.0%
!! TTTGGTCTCGTTTTTGCTCT+TGG - tig0028625:5694-5713 Msa1438780:intron 40.0%
TGTATACCTACCTTCCTGAT+GGG + tig0028625:5729-5748 None:intergenic 40.0%
ATGTATACCTACCTTCCTGA+TGG + tig0028625:5730-5749 None:intergenic 40.0%
TGTCTTGGTTGGGACTAAAA+AGG + tig0028625:5881-5900 None:intergenic 40.0%
! GGTATAATTTTTCCCCCTTC+TGG - tig0028625:5950-5969 Msa1438780:intron 40.0%
ACTAGTGAATCCAGAGTTCA+GGG - tig0028625:6078-6097 Msa1438780:intron 40.0%
TTACTTACTTCGAGAGCAGT+TGG + tig0028625:6287-6306 None:intergenic 40.0%
ACTGCTCTCGAAGTAAGTAA+TGG - tig0028625:6287-6306 Msa1438780:intron 40.0%
! AGCACTCGTGCTTTTAATCA+TGG - tig0028625:6729-6748 Msa1438780:intron 40.0%
!! CGAAAAGCATCAGCATCATT+TGG + tig0028625:6796-6815 None:intergenic 40.0%
TGCAGAATGAACTGAGTTCT+TGG + tig0028625:6987-7006 None:intergenic 40.0%
! AGAATAGCTGGTCTAAAAGC+AGG + tig0028625:7080-7099 None:intergenic 40.0%
!!! TGCCCTACAGTTTTAAACTC+TGG + tig0028625:7126-7145 None:intergenic 40.0%
CTTGGCAGCAAGTAATGAAT+TGG + tig0028625:7287-7306 None:intergenic 40.0%
TCAAGATGACAAACCTCATC+TGG + tig0028625:7313-7332 None:intergenic 40.0%
!! ATTTTGCTATACGGCCATTC+TGG - tig0028625:7411-7430 Msa1438780:CDS 40.0%
TCTAAATACAGTGGGTCTAG+TGG - tig0028625:7454-7473 Msa1438780:intron 40.0%
!! TGGTCATGGTGCTGATATAA+AGG + tig0028625:7786-7805 None:intergenic 40.0%
GACCATAACTTTAACATGGC+AGG - tig0028625:7801-7820 Msa1438780:intron 40.0%
ACCGAAGAAGGAAACTATCA+AGG - tig0028625:8046-8065 Msa1438780:intron 40.0%
! ATCTGTTGTGATGCGCATTT+TGG - tig0028625:8122-8141 Msa1438780:intron 40.0%
ACCGCATCATGATGCAATTA+TGG + tig0028625:8426-8445 None:intergenic 40.0%
TTGTTGCAACCGCAATATTG+TGG - tig0028625:8454-8473 Msa1438780:intron 40.0%
GTTTCCAGGGTTTCAAATTG+CGG + tig0028625:8499-8518 None:intergenic 40.0%
GAGCTGATCGTAAATAGCTA+TGG + tig0028625:8899-8918 None:intergenic 40.0%
AAAACATTGGAGATGCTGAG+AGG - tig0028625:9325-9344 Msa1438780:intron 40.0%
! CAGTTGTAACCTTTTTCTGC+AGG - tig0028625:9487-9506 Msa1438780:intron 40.0%
!! ACGAGTGCTTTAGCTTTATC+TGG + tig0028625:9527-9546 None:intergenic 40.0%
! AGATAAAGCTAAAGCACTCG+TGG - tig0028625:9526-9545 Msa1438780:intron 40.0%
GAATCTGCAGTAAGGAAAAG+AGG + tig0028625:9651-9670 None:intergenic 40.0%
CTTTCTGTGAATCTGCAGTA+AGG + tig0028625:9659-9678 None:intergenic 40.0%
GAATCTGCAGTAAGGAAAAG+AGG + tig0028625:9651-9670 None:intergenic 40.0%
CTTTCTGTGAATCTGCAGTA+AGG + tig0028625:9659-9678 None:intergenic 40.0%
TCCCCATTAAGTAGAAGCTA+TGG - tig0028625:9790-9809 Msa1438780:five_prime_UTR 40.0%
GCCATAGCTTCTACTTAATG+GGG + tig0028625:9794-9813 None:intergenic 40.0%
GGCCATAGCTTCTACTTAAT+GGG + tig0028625:9795-9814 None:intergenic 40.0%
TGGCCATAGCTTCTACTTAA+TGG + tig0028625:9796-9815 None:intergenic 40.0%
! ATGTGGACTGCAATGTCCAT+CGG - tig0028625:4959-4978 Msa1438780:intron 45.0%
TGCTCGGATTCAAATTCTCG+TGG - tig0028625:5049-5068 Msa1438780:three_prime_UTR 45.0%
CTTACTAGGAGACTGTTTGG+TGG + tig0028625:5284-5303 None:intergenic 45.0%
GTCAGCACTTGAGCAAAAGA+AGG - tig0028625:5549-5568 Msa1438780:intron 45.0%
!! ATTGGCTTTGCTACCAAGGT+TGG - tig0028625:5649-5668 Msa1438780:intron 45.0%
AGCTACACCTATTCCAACCT+TGG + tig0028625:5665-5684 None:intergenic 45.0%
! CTTGGAGATTTTCTCCCATC+AGG - tig0028625:5712-5731 Msa1438780:intron 45.0%
! GAGATTTTCTCCCATCAGGA+AGG - tig0028625:5716-5735 Msa1438780:intron 45.0%
! TTTTCTCCCATCAGGAAGGT+AGG - tig0028625:5720-5739 Msa1438780:intron 45.0%
GAAGGATAAAGCTGCTCTTC+AGG - tig0028625:5929-5948 Msa1438780:intron 45.0%
AACTGACTGATTGCCAGAAG+GGG + tig0028625:5966-5985 None:intergenic 45.0%
GAACTGACTGATTGCCAGAA+GGG + tig0028625:5967-5986 None:intergenic 45.0%
TGAACTGACTGATTGCCAGA+AGG + tig0028625:5968-5987 None:intergenic 45.0%
TTCTGGCAATCAGTCAGTTC+AGG - tig0028625:5967-5986 Msa1438780:intron 45.0%
GACTAGTGAATCCAGAGTTC+AGG - tig0028625:6077-6096 Msa1438780:intron 45.0%
ATCCAGAGTTCAGGGTTTAC+TGG - tig0028625:6086-6105 Msa1438780:intron 45.0%
TTCCTGAAATCTGGCAGAGT+AGG - tig0028625:6219-6238 Msa1438780:intron 45.0%
AATCTGGCAGAGTAGGCTTA+AGG - tig0028625:6226-6245 Msa1438780:intron 45.0%
GCAGTAACTTTGGCAGAACT+AGG - tig0028625:6374-6393 Msa1438780:intron 45.0%
TCAAGTAGAGAAGCAGCTCT+TGG + tig0028625:6407-6426 None:intergenic 45.0%
! GCTGATGCTTTTCGTTTGCT+TGG - tig0028625:6802-6821 Msa1438780:intron 45.0%
! ACAAACCTCATCTGGCTTCT+TGG + tig0028625:7305-7324 None:intergenic 45.0%
AATGTGCTATACGGCCATTC+TGG - tig0028625:7351-7370 Msa1438780:intron 45.0%
!! ATGAGCGTTGAGAACCAGAA+TGG + tig0028625:7428-7447 None:intergenic 45.0%
CCAGTTTCTGTGAGTCTGTT+GGG + tig0028625:7593-7612 None:intergenic 45.0%
TCCAGTTTCTGTGAGTCTGT+TGG + tig0028625:7594-7613 None:intergenic 45.0%
!! TTAATTTGCGGTCGCTGATG+CGG - tig0028625:8071-8090 Msa1438780:intron 45.0%
!!! GATGCGCATTTTGGTTGTTG+CGG - tig0028625:8131-8150 Msa1438780:intron 45.0%
AGTGAAAACCGCAACGTAGT+GGG + tig0028625:8387-8406 None:intergenic 45.0%
ATTGCATCATGATGCGGTTG+TGG - tig0028625:8428-8447 Msa1438780:CDS 45.0%
GTGATGTGGCCACAATATTG+CGG + tig0028625:8466-8485 None:intergenic 45.0%
TAGGGAAAGCCTATTCAGAC+TGG - tig0028625:8857-8876 Msa1438780:intron 45.0%
AGGGAAAGCCTATTCAGACT+GGG - tig0028625:8858-8877 Msa1438780:intron 45.0%
! ACTCACCCTGATGATTTTCG+TGG - tig0028625:8925-8944 Msa1438780:intron 45.0%
CAGTTCATGGTCAAAGCGAA+AGG + tig0028625:9159-9178 None:intergenic 45.0%
CTTGCGCGACTGAGAATATA+TGG - tig0028625:9378-9397 Msa1438780:intron 45.0%
! GTAACCTTTTTCTGCAGGCT+AGG - tig0028625:9492-9511 Msa1438780:intron 45.0%
AGAACCTAGCCTGCAGAAAA+AGG + tig0028625:9499-9518 None:intergenic 45.0%
!! ATATAGATTAATTAATTAAT+TGG - tig0028625:5490-5509 Msa1438780:intron 5.0%
GTATGGATGGTATAAGCGGG+AGG - tig0028625:4821-4840 Msa1438780:three_prime_UTR 50.0%
! GTTGCAGTTGATGCTTCCGA+TGG + tig0028625:4978-4997 None:intergenic 50.0%
TGCAACTGCAATTGCAACGG+TGG - tig0028625:4992-5011 Msa1438780:intron 50.0%
TCAAATTCTCGTGGCTTCGG+AGG - tig0028625:5058-5077 Msa1438780:three_prime_UTR 50.0%
! CTAGGAGACTGTTTGGTGGA+TGG + tig0028625:5280-5299 None:intergenic 50.0%
TGTGAGGTTAAAAGCGGTGC+CGG + tig0028625:5385-5404 None:intergenic 50.0%
GTCTGTAGCATCAACCTGTG+AGG + tig0028625:5401-5420 None:intergenic 50.0%
GGTGTAGCTGTTGCAGTCTT+TGG - tig0028625:5676-5695 Msa1438780:intron 50.0%
ACCACAGCACTGTCTTGGTT+GGG + tig0028625:5891-5910 None:intergenic 50.0%
CATTGACCACAGCACTGTCT+TGG + tig0028625:5896-5915 None:intergenic 50.0%
ACTGACTGATTGCCAGAAGG+GGG + tig0028625:5965-5984 None:intergenic 50.0%
GACCAGTAAACCCTGAACTC+TGG + tig0028625:6091-6110 None:intergenic 50.0%
AGCCTACTCTGCCAGATTTC+AGG + tig0028625:6224-6243 None:intergenic 50.0%
GAGAGCAGTTGGATCTCTTG+GGG + tig0028625:6276-6295 None:intergenic 50.0%
CGAGAGCAGTTGGATCTCTT+GGG + tig0028625:6277-6296 None:intergenic 50.0%
TCGAGAGCAGTTGGATCTCT+TGG + tig0028625:6278-6297 None:intergenic 50.0%
TCAGGGAGCTGCAGTAACTT+TGG - tig0028625:6364-6383 Msa1438780:intron 50.0%
AAACTGTAGGGCACAGCAAG+AGG - tig0028625:7133-7152 Msa1438780:CDS 50.0%
CTTCTGAACTCAGACGCTCA+CGG + tig0028625:7545-7564 None:intergenic 50.0%
CCCAACAGACTCACAGAAAC+TGG - tig0028625:7590-7609 Msa1438780:intron 50.0%
GGTTGTGACCACTACGATTG+CGG - tig0028625:8092-8111 Msa1438780:intron 50.0%
GTTGTGACCACTACGATTGC+GGG - tig0028625:8093-8112 Msa1438780:intron 50.0%
TTGTGACCACTACGATTGCG+GGG - tig0028625:8094-8113 Msa1438780:intron 50.0%
CAGTGAAAACCGCAACGTAG+TGG + tig0028625:8388-8407 None:intergenic 50.0%
! TGGTCCGCAATTTGAAACCC+TGG - tig0028625:8492-8511 Msa1438780:intron 50.0%
GGGAAAGCCTATTCAGACTG+GGG - tig0028625:8859-8878 Msa1438780:intron 50.0%
GATGGTATAAGCGGGAGGAG+AGG - tig0028625:4826-4845 Msa1438780:three_prime_UTR 55.0%
!! TTGCAACGGTGGTTTGCTCC+CGG - tig0028625:5003-5022 Msa1438780:three_prime_UTR 55.0%
AATTCTCGTGGCTTCGGAGG+AGG - tig0028625:5061-5080 Msa1438780:three_prime_UTR 55.0%
!! GGCACCGCTTTTAACCTCAC+AGG - tig0028625:5384-5403 Msa1438780:intron 55.0%
TCCCAACCAAGACAGTGCTG+TGG - tig0028625:5887-5906 Msa1438780:intron 55.0%
GACCACAGCACTGTCTTGGT+TGG + tig0028625:5892-5911 None:intergenic 55.0%
TAGGGCACAGCAAGAGGCTA+TGG - tig0028625:7139-7158 Msa1438780:CDS 55.0%
TGCTGCCAAGAAGCCAGATG+AGG - tig0028625:7297-7316 Msa1438780:intron 55.0%
TGCAATCCCCGCAATCGTAG+TGG + tig0028625:8103-8122 None:intergenic 55.0%
GTGTAACGGCTGGACTGCAA+CGG + tig0028625:8365-8384 None:intergenic 55.0%
!! AACGTAGTGGGTGTAACGGC+TGG + tig0028625:8375-8394 None:intergenic 55.0%
!! CCGCAACGTAGTGGGTGTAA+CGG + tig0028625:8379-8398 None:intergenic 55.0%
CCGTTACACCCACTACGTTG+CGG - tig0028625:8376-8395 Msa1438780:intron 55.0%
TGTGGCCACATCACGTGATG+TGG - tig0028625:8472-8491 Msa1438780:intron 55.0%
TATTCAGACTGGGGCCACGT+CGG - tig0028625:8868-8887 Msa1438780:intron 55.0%
TAGCTATGGCATCACCGACG+TGG + tig0028625:8885-8904 None:intergenic 55.0%
AAGCAGCAGCAGCAGCAGCA+AGG - tig0028625:5142-5161 Msa1438780:CDS 60.0%
AGCAGCAGCAGCAGCAGCAA+GGG - tig0028625:5143-5162 Msa1438780:CDS 60.0%
TGAACTCAGACGCTCACGGC+AGG + tig0028625:7541-7560 None:intergenic 60.0%
GCGGACCACATCACGTGATG+TGG + tig0028625:8480-8499 None:intergenic 60.0%
GACGTGGCCCCAGTCTGAAT+AGG + tig0028625:8869-8888 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0028625 gene 4810 9892 4810 ID=Msa1438780;Name=Msa1438780
tig0028625 mRNA 4810 9892 4810 ID=Msa1438780-mRNA-1;Parent=Msa1438780;Name=Msa1438780-mRNA-1;_AED=0.12;_eAED=0.12;_QI=149|1|1|1|0.92|0.85|14|231|402
tig0028625 exon 4810 4902 4810 ID=Msa1438780-mRNA-1:exon:11434;Parent=Msa1438780-mRNA-1
tig0028625 exon 4999 5193 4999 ID=Msa1438780-mRNA-1:exon:11433;Parent=Msa1438780-mRNA-1
tig0028625 exon 5343 5399 5343 ID=Msa1438780-mRNA-1:exon:11432;Parent=Msa1438780-mRNA-1
tig0028625 exon 5742 5858 5742 ID=Msa1438780-mRNA-1:exon:11431;Parent=Msa1438780-mRNA-1
tig0028625 exon 7079 7183 7079 ID=Msa1438780-mRNA-1:exon:11430;Parent=Msa1438780-mRNA-1
tig0028625 exon 7384 7458 7384 ID=Msa1438780-mRNA-1:exon:11429;Parent=Msa1438780-mRNA-1
tig0028625 exon 7814 7915 7814 ID=Msa1438780-mRNA-1:exon:11428;Parent=Msa1438780-mRNA-1
tig0028625 exon 8263 8334 8263 ID=Msa1438780-mRNA-1:exon:11427;Parent=Msa1438780-mRNA-1
tig0028625 exon 8404 8466 8404 ID=Msa1438780-mRNA-1:exon:11426;Parent=Msa1438780-mRNA-1
tig0028625 exon 8752 8815 8752 ID=Msa1438780-mRNA-1:exon:11425;Parent=Msa1438780-mRNA-1
tig0028625 exon 8965 9153 8965 ID=Msa1438780-mRNA-1:exon:11424;Parent=Msa1438780-mRNA-1
tig0028625 exon 9247 9322 9247 ID=Msa1438780-mRNA-1:exon:11423;Parent=Msa1438780-mRNA-1
tig0028625 exon 9404 9429 9404 ID=Msa1438780-mRNA-1:exon:11422;Parent=Msa1438780-mRNA-1
tig0028625 exon 9538 9892 9538 ID=Msa1438780-mRNA-1:exon:11421;Parent=Msa1438780-mRNA-1
tig0028625 five_prime_UTR 9744 9892 9744 ID=Msa1438780-mRNA-1:five_prime_utr;Parent=Msa1438780-mRNA-1
tig0028625 CDS 9538 9743 9538 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 9404 9429 9404 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 9247 9322 9247 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 8965 9153 8965 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 8752 8815 8752 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 8404 8466 8404 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 8263 8334 8263 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 7814 7915 7814 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 7384 7458 7384 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 7079 7183 7079 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 5742 5858 5742 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 5343 5399 5343 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 CDS 5137 5193 5137 ID=Msa1438780-mRNA-1:cds;Parent=Msa1438780-mRNA-1
tig0028625 three_prime_UTR 4999 5136 4999 ID=Msa1438780-mRNA-1:three_prime_utr;Parent=Msa1438780-mRNA-1
tig0028625 three_prime_UTR 4810 4902 4810 ID=Msa1438780-mRNA-1:three_prime_utr;Parent=Msa1438780-mRNA-1
Gene Sequence

>Msa1438780

ATGTGGACTGCAATGTCCATCGGAAGCATCAACTGCAACTGCAATTGCAACGGTGGTTTGCTCCCGGTTCGAAGAATAATAATAAAAAATTGCTCGGATTCAAATTCTCGTGGCTTCGGAGGAGGTGCAGATAACAATAACAATAAAGTTGCTGCTGCTGCTGATAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCAGCAAGGGAAACCATCCACCAAACAGTCTCCTAAGCCGGCACCGCTTTTAACCTCACAGGTTGATGCTACAGACATTGACTTTCAGGAACGCCTCAACGCTATTAAAAGGTCAGCACTTGAGCAAAAGAAGGCAGAAGAGAATAAACAATTTGGACCAATTGACTATGATGCACCTATTTCTATTTCTTCAGAGTCAGACAACAAAACAATTGGCTTTGCTACCAAGGTTGGAATAGGTGTAGCTGTTGCAGTCTTTGGTCTCGTTTTTGCTCTTGGAGATTTTCTCCCATCAGGAAGTCCCAACCAAGACAGTGCTGTGGTCAATGATAAATTGTCAGAGAAGGATAAAGCTGCTCTTCAGAGTAGGCTTAAGGAATTTGAAGCAACATTAAGTAACTCCCCAAGAGATCCAACTGCTCTCGAAGGAGCTGCAGTAACTTTGGCAGAACTAGGAGAGTATCCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGAAAAACCAAATGATGCTGATGCTTTTCGTTTGCTTGGAGAAGTAAAATATGAACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGTTCAGCAAAGGTATCTGAAGATATCAAATTTGAAGTTCTTCGTGGCCTTACCAATTCATTACTTGCTGCCAAGAAGCCAGATGAGGCTGTTCAATTACTTTTGGCCTGCCGTGAGCGTCTGAGTTCAGAAGACTTCAGCAGAAAATCTGATAGCAGCCCAACAGACTCACAGAAACTGGATCCAATTCAAGTTGAATTACTTCTAGGGAAAGCCTATTCAGACTGGGGCCACGTCGGTGATGCCATAGCTATTTACGATCAGCTCATATCAACTCACCCTGATGATTTTCGTGGATATTTAGCCAAGGGAATTATCCTAAAAGAAAACAAAAACATTGGAGATGCTGAGAGGATGTTCATTCAAGCTAGGTTCTTTGCACCAGATAAAGCTAAAGCACTCGTGGACCGTTATTCAAGATAA

Protein sequence

>Msa1438780

MWTAMSIGSINCNCNCNGGLLPVRRIIIKNCSDSNSRGFGGGADNNNNKVAAAADKKKKKKKQQQQQQGKPSTKQSPKPAPLLTSQVDATDIDFQERLNAIKRSALEQKKAEENKQFGPIDYDAPISISSESDNKTIGFATKVGIGVAVAVFGLVFALGDFLPSGSPNQDSAVVNDKLSEKDKAALQSRLKEFEATLSNSPRDPTALEGAAVTLAELGEYPRAASLLDDLTKEKPNDADAFRLLGEVKYELKDYEGSVAAYKSSAKVSEDIKFEVLRGLTNSLLAAKKPDEAVQLLLACRERLSSEDFSRKSDSSPTDSQKLDPIQVELLLGKAYSDWGHVGDAIAIYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR*