Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143240 | XP_003611934.1 | 98.447 | 322 | 5 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143240 | sp|Q94A43|BEH2_ARATH | 64.907 | 322 | 83 | 13 | 9 | 322 | 16 | 315 | 1.98e-100 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143240 | G7KC60 | 98.447 | 322 | 5 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1143240 | TF | BES1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1143240 | -0.805855 | 1.090961e-49 | -8.615850e-47 |
| Msa0008850 | Msa1143240 | -0.800612 | 1.328448e-48 | -8.615850e-47 |
| Msa0012780 | Msa1143240 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0012820 | Msa1143240 | 0.827614 | 1.419200e-54 | -8.615850e-47 |
| Msa0020630 | Msa1143240 | -0.827797 | 1.282759e-54 | -8.615850e-47 |
| Msa0027540 | Msa1143240 | -0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0036580 | Msa1143240 | 0.803097 | 4.102302e-49 | -8.615850e-47 |
| Msa0044710 | Msa1143240 | -0.805864 | 1.086232e-49 | -8.615850e-47 |
| Msa0055280 | Msa1143240 | -0.827377 | 1.617986e-54 | -8.615850e-47 |
| Msa0061600 | Msa1143240 | 0.854306 | 1.343883e-61 | -8.615850e-47 |
| Msa0068410 | Msa1143240 | -0.826165 | 3.150950e-54 | -8.615850e-47 |
| Msa0075310 | Msa1143240 | -0.818914 | 1.528478e-52 | -8.615850e-47 |
| Msa0101060 | Msa1143240 | -0.830708 | 2.521681e-55 | -8.615850e-47 |
| Msa0106120 | Msa1143240 | 0.808908 | 2.457852e-50 | -8.615850e-47 |
| Msa0106130 | Msa1143240 | 0.843890 | 1.060527e-58 | -8.615850e-47 |
| Msa0114250 | Msa1143240 | -0.812301 | 4.541721e-51 | -8.615850e-47 |
| Msa0620640 | Msa1143240 | -0.830684 | 2.556376e-55 | -8.615850e-47 |
| Msa0621890 | Msa1143240 | -0.809654 | 1.700566e-50 | -8.615850e-47 |
| Msa0638320 | Msa1143240 | -0.810782 | 9.713826e-51 | -8.615850e-47 |
| Msa0642650 | Msa1143240 | -0.801002 | 1.105953e-48 | -8.615850e-47 |
| Msa0651520 | Msa1143240 | 0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0655660 | Msa1143240 | 0.812672 | 3.768076e-51 | -8.615850e-47 |
| Msa0660880 | Msa1143240 | 0.825068 | 5.734628e-54 | -8.615850e-47 |
| Msa0677270 | Msa1143240 | -0.812483 | 4.143947e-51 | -8.615850e-47 |
| Msa0701840 | Msa1143240 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0707780 | Msa1143240 | -0.801878 | 7.314333e-49 | -8.615850e-47 |
| Msa0714600 | Msa1143240 | -0.821342 | 4.249569e-53 | -8.615850e-47 |
| Msa0716740 | Msa1143240 | 0.809638 | 1.713891e-50 | -8.615850e-47 |
| Msa0733000 | Msa1143240 | -0.800781 | 1.226965e-48 | -8.615850e-47 |
| Msa0754720 | Msa1143240 | 0.802233 | 6.184234e-49 | -8.615850e-47 |
| Msa0757540 | Msa1143240 | 0.845583 | 3.709806e-59 | -8.615850e-47 |
| Msa0757990 | Msa1143240 | 0.815598 | 8.517260e-52 | -8.615850e-47 |
| Msa0789270 | Msa1143240 | -0.807052 | 6.103239e-50 | -8.615850e-47 |
| Msa0789280 | Msa1143240 | -0.802641 | 5.094980e-49 | -8.615850e-47 |
| Msa0789290 | Msa1143240 | -0.806274 | 8.905270e-50 | -8.615850e-47 |
| Msa0789300 | Msa1143240 | -0.807717 | 4.411122e-50 | -8.615850e-47 |
| Msa0792790 | Msa1143240 | 0.809325 | 2.001279e-50 | -8.615850e-47 |
| Msa0798830 | Msa1143240 | 0.916859 | 1.071385e-85 | -8.615850e-47 |
| Msa0799290 | Msa1143240 | 0.808338 | 3.252401e-50 | -8.615850e-47 |
| Msa0828570 | Msa1143240 | -0.823880 | 1.091415e-53 | -8.615850e-47 |
| Msa0837510 | Msa1143240 | 0.808278 | 3.350370e-50 | -8.615850e-47 |
| Msa0837990 | Msa1143240 | -0.808166 | 3.539356e-50 | -8.615850e-47 |
| Msa0137120 | Msa1143240 | 0.812986 | 3.216909e-51 | -8.615850e-47 |
| Msa0139720 | Msa1143240 | 0.804596 | 2.002699e-49 | -8.615850e-47 |
| Msa0152740 | Msa1143240 | 0.818514 | 1.884390e-52 | -8.615850e-47 |
| Msa0156650 | Msa1143240 | 0.808236 | 3.419409e-50 | -8.615850e-47 |
| Msa0159750 | Msa1143240 | -0.824799 | 6.637074e-54 | -8.615850e-47 |
| Msa0168100 | Msa1143240 | -0.819345 | 1.219650e-52 | -8.615850e-47 |
| Msa0176620 | Msa1143240 | 0.818326 | 2.078216e-52 | -8.615850e-47 |
| Msa0182930 | Msa1143240 | -0.801913 | 7.195101e-49 | -8.615850e-47 |
| Msa0197750 | Msa1143240 | 0.817060 | 4.009893e-52 | -8.615850e-47 |
| Msa0200950 | Msa1143240 | 0.826534 | 2.573913e-54 | -8.615850e-47 |
| Msa0223100 | Msa1143240 | -0.818706 | 1.704287e-52 | -8.615850e-47 |
| Msa0223290 | Msa1143240 | -0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa0405660 | Msa1143240 | 0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa0413740 | Msa1143240 | -0.810530 | 1.101094e-50 | -8.615850e-47 |
| Msa0414070 | Msa1143240 | -0.801611 | 8.298737e-49 | -8.615850e-47 |
| Msa0419620 | Msa1143240 | 0.804656 | 1.945713e-49 | -8.615850e-47 |
| Msa0423360 | Msa1143240 | 0.829156 | 6.026557e-55 | -8.615850e-47 |
| Msa0427590 | Msa1143240 | -0.800879 | 1.171675e-48 | -8.615850e-47 |
| Msa0458790 | Msa1143240 | -0.804615 | 1.984357e-49 | -8.615850e-47 |
| Msa0459120 | Msa1143240 | -0.801700 | 7.957094e-49 | -8.615850e-47 |
| Msa0462590 | Msa1143240 | -0.809338 | 1.987632e-50 | -8.615850e-47 |
| Msa0467920 | Msa1143240 | 0.835869 | 1.305362e-56 | -8.615850e-47 |
| Msa0479230 | Msa1143240 | -0.802852 | 4.608171e-49 | -8.615850e-47 |
| Msa0981820 | Msa1143240 | 0.800508 | 1.394437e-48 | -8.615850e-47 |
| Msa1011320 | Msa1143240 | 0.813478 | 2.507875e-51 | -8.615850e-47 |
| Msa1011350 | Msa1143240 | 0.800685 | 1.283276e-48 | -8.615850e-47 |
| Msa1020930 | Msa1143240 | 0.809493 | 1.841163e-50 | -8.615850e-47 |
| Msa1037060 | Msa1143240 | 0.845961 | 2.929399e-59 | -8.615850e-47 |
| Msa1076680 | Msa1143240 | -0.810119 | 1.350785e-50 | -8.615850e-47 |
| Msa1077940 | Msa1143240 | 0.835035 | 2.121270e-56 | -8.615850e-47 |
| Msa1079340 | Msa1143240 | 0.811118 | 8.214724e-51 | -8.615850e-47 |
| Msa1079370 | Msa1143240 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
| Msa0252180 | Msa1143240 | -0.802619 | 5.149076e-49 | -8.615850e-47 |
| Msa0258670 | Msa1143240 | 0.840482 | 8.466682e-58 | -8.615850e-47 |
| Msa0261250 | Msa1143240 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0264940 | Msa1143240 | 0.842263 | 2.877084e-58 | -8.615850e-47 |
| Msa0272480 | Msa1143240 | 0.807467 | 4.983955e-50 | -8.615850e-47 |
| Msa0277280 | Msa1143240 | 0.812476 | 4.159212e-51 | -8.615850e-47 |
| Msa0288240 | Msa1143240 | -0.836184 | 1.085992e-56 | -8.615850e-47 |
| Msa0288330 | Msa1143240 | -0.840769 | 7.120632e-58 | -8.615850e-47 |
| Msa0298970 | Msa1143240 | -0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0301180 | Msa1143240 | -0.821312 | 4.317369e-53 | -8.615850e-47 |
| Msa0302990 | Msa1143240 | 0.841419 | 4.806054e-58 | -8.615850e-47 |
| Msa0312690 | Msa1143240 | 0.811982 | 5.331123e-51 | -8.615850e-47 |
| Msa0320540 | Msa1143240 | -0.813769 | 2.164499e-51 | -8.615850e-47 |
| Msa0326670 | Msa1143240 | -0.853790 | 1.893459e-61 | -8.615850e-47 |
| Msa0340550 | Msa1143240 | -0.803346 | 3.642066e-49 | -8.615850e-47 |
| Msa1130210 | Msa1143240 | 0.802720 | 4.907180e-49 | -8.615850e-47 |
| Msa1132560 | Msa1143240 | 0.804905 | 1.725757e-49 | -8.615850e-47 |
| Msa1143240 | Msa1164800 | 0.847675 | 9.952947e-60 | -8.615850e-47 |
| Msa1143240 | Msa1177620 | -0.803435 | 3.490329e-49 | -8.615850e-47 |
| Msa1143240 | Msa1182830 | -0.803846 | 2.868622e-49 | -8.615850e-47 |
| Msa1143240 | Msa1207480 | 0.826117 | 3.234594e-54 | -8.615850e-47 |
| Msa1143240 | Msa1219780 | 0.806867 | 6.676275e-50 | -8.615850e-47 |
| Msa1143240 | Msa1221570 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
| Msa1143240 | Msa1222030 | 0.823093 | 1.667522e-53 | -8.615850e-47 |
| Msa1143240 | Msa1238480 | -0.804312 | 2.294336e-49 | -8.615850e-47 |
| Msa1143240 | Msa1265960 | -0.831374 | 1.731279e-55 | -8.615850e-47 |
| Msa1143240 | Msa1326000 | -0.807872 | 4.088722e-50 | -8.615850e-47 |
| Msa1143240 | Msa1335970 | 0.842646 | 2.277258e-58 | -8.615850e-47 |
| Msa1143240 | Msa1373950 | -0.801074 | 1.068943e-48 | -8.615850e-47 |
| Msa1143240 | Msa1380490 | 0.802516 | 5.407354e-49 | -8.615850e-47 |
| Msa1143240 | Msa1395690 | 0.813151 | 2.959740e-51 | -8.615850e-47 |
| Msa1143240 | Msa1400700 | 0.837486 | 5.052786e-57 | -8.615850e-47 |
| Msa1143240 | Msa1405470 | -0.803230 | 3.849435e-49 | -8.615850e-47 |
| Msa1143240 | Msa1428420 | -0.801867 | 7.351458e-49 | -8.615850e-47 |
| Msa1143240 | Msa1431000 | -0.823642 | 1.240896e-53 | -8.615850e-47 |
| Msa1143240 | Msa1447160 | 0.822948 | 1.802367e-53 | -8.615850e-47 |
| Msa1143240 | Msa1454290 | 0.800395 | 1.470591e-48 | -8.615850e-47 |
| Msa1143240 | Msa1458920 | -0.802758 | 4.819846e-49 | -8.615850e-47 |
| Msa1143240 | Msa1460310 | 0.841637 | 4.210905e-58 | -8.615850e-47 |
| Msa0505390 | Msa1143240 | -0.807616 | 4.632585e-50 | -8.615850e-47 |
| Msa0511720 | Msa1143240 | 0.826845 | 2.169435e-54 | -8.615850e-47 |
| Msa0518160 | Msa1143240 | -0.811854 | 5.685180e-51 | -8.615850e-47 |
| Msa0524050 | Msa1143240 | -0.817332 | 3.483607e-52 | -8.615850e-47 |
| Msa0531990 | Msa1143240 | 0.841952 | 3.477401e-58 | -8.615850e-47 |
| Msa0532100 | Msa1143240 | 0.844674 | 6.532589e-59 | -8.615850e-47 |
| Msa0574170 | Msa1143240 | -0.813252 | 2.812776e-51 | -8.615850e-47 |
| Msa0575990 | Msa1143240 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
| Msa0576100 | Msa1143240 | 0.810430 | 1.157062e-50 | -8.615850e-47 |
| Msa0576420 | Msa1143240 | -0.804792 | 1.822524e-49 | -8.615850e-47 |
| Msa0851740 | Msa1143240 | -0.804907 | 1.724064e-49 | -8.615850e-47 |
| Msa0865990 | Msa1143240 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0890250 | Msa1143240 | -0.803202 | 3.901578e-49 | -8.615850e-47 |
| Msa0909710 | Msa1143240 | -0.829595 | 4.714099e-55 | -8.615850e-47 |
| Msa0951720 | Msa1143240 | -0.821507 | 3.891178e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143240 | MtrunA17_Chr5g0403631 | 98.447 | 322 | 5 | 0 | 1 | 322 | 1 | 322 | 0.0 | 647 |
| Msa1143240 | MtrunA17_Chr3g0141401 | 54.103 | 329 | 119 | 8 | 2 | 322 | 8 | 312 | 5.71e-80 | 246 |
| Msa1143240 | MtrunA17_Chr1g0154651 | 37.975 | 316 | 111 | 8 | 9 | 322 | 14 | 246 | 2.05e-49 | 165 |
| Msa1143240 | MtrunA17_Chr2g0315211 | 43.750 | 352 | 132 | 12 | 6 | 323 | 3 | 322 | 8.71e-38 | 137 |
| Msa1143240 | MtrunA17_Chr2g0315201 | 42.075 | 347 | 138 | 12 | 6 | 323 | 3 | 315 | 2.54e-34 | 127 |
| Msa1143240 | MtrunA17_Chr5g0408851 | 60.714 | 56 | 22 | 0 | 20 | 75 | 61 | 116 | 1.59e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143240 | AT1G75080.2 | 54.303 | 337 | 105 | 12 | 9 | 322 | 23 | 333 | 5.55e-93 | 280 |
| Msa1143240 | AT1G75080.1 | 54.303 | 337 | 105 | 12 | 9 | 322 | 23 | 333 | 5.55e-93 | 280 |
| Msa1143240 | AT1G19350.5 | 54.006 | 337 | 106 | 12 | 9 | 322 | 22 | 332 | 3.13e-90 | 273 |
| Msa1143240 | AT1G19350.1 | 54.006 | 337 | 106 | 12 | 9 | 322 | 22 | 332 | 3.13e-90 | 273 |
| Msa1143240 | AT1G19350.6 | 54.006 | 337 | 106 | 12 | 9 | 322 | 22 | 332 | 3.13e-90 | 273 |
| Msa1143240 | AT1G19350.4 | 54.006 | 337 | 106 | 12 | 9 | 322 | 22 | 332 | 3.13e-90 | 273 |
| Msa1143240 | AT1G19350.3 | 54.006 | 337 | 106 | 12 | 9 | 322 | 44 | 354 | 3.17e-90 | 274 |
| Msa1143240 | AT3G50750.1 | 51.863 | 322 | 95 | 8 | 2 | 319 | 4 | 269 | 1.77e-76 | 236 |
| Msa1143240 | AT4G36780.1 | 71.859 | 199 | 49 | 5 | 9 | 203 | 16 | 211 | 1.11e-61 | 197 |
| Msa1143240 | AT1G78700.1 | 41.193 | 352 | 135 | 13 | 6 | 319 | 3 | 320 | 8.85e-45 | 155 |
| Msa1143240 | AT4G18890.1 | 40.729 | 329 | 136 | 12 | 6 | 323 | 3 | 283 | 6.16e-33 | 123 |
| Msa1143240 | AT2G45880.1 | 38.686 | 137 | 75 | 3 | 3 | 136 | 63 | 193 | 8.87e-15 | 75.5 |
| Msa1143240 | AT5G45300.1 | 53.521 | 71 | 30 | 1 | 20 | 90 | 97 | 164 | 1.39e-14 | 75.1 |
| Msa1143240 | AT5G45300.3 | 53.521 | 71 | 30 | 1 | 20 | 90 | 111 | 178 | 1.43e-14 | 75.1 |
| Msa1143240 | AT5G45300.2 | 54.545 | 66 | 27 | 1 | 20 | 85 | 97 | 159 | 5.78e-14 | 73.2 |
Find 139 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGCAATAACACCCAATT+TGG | 0.187555 | 7_4:-18673540 | None:intergenic |
| GATTCAGTTGTTTGCTATAA+TGG | 0.236232 | 7_4:+18673903 | Msa1143240:three_prime_UTR |
| ATTGCTGCTAAGATCTATTC+AGG | 0.302180 | 7_4:+18671761 | Msa1143240:CDS |
| TGGGGAGTGATCTGCATTGC+TGG | 0.307829 | 7_4:-18673177 | None:intergenic |
| CAATAATGCAGTTACTTATA+TGG | 0.314332 | 7_4:-18673864 | None:intergenic |
| ATTCAGTTGTTTGCTATAAT+GGG | 0.317805 | 7_4:+18673904 | Msa1143240:three_prime_UTR |
| GAAGAAAGAGGTGGCGTAAC+AGG | 0.321873 | 7_4:-18672901 | None:intergenic |
| GCATCTGACTCATCGCATTC+TGG | 0.328895 | 7_4:-18673063 | None:intergenic |
| TAGTCAGGGAAATTCCAAAT+TGG | 0.334193 | 7_4:+18673526 | Msa1143240:three_prime_UTR |
| GGAGTTCCTCCCACTTCATT+TGG | 0.344592 | 7_4:-18672658 | None:intergenic |
| GTGGCGAAACGTGGAGTTAA+AGG | 0.352130 | 7_4:-18672974 | None:intergenic |
| TTTCTCCTTGTATATTTGAT+TGG | 0.357908 | 7_4:+18674059 | Msa1143240:three_prime_UTR |
| TTGGAGCTTACTCTAGGGTT+TGG | 0.376143 | 7_4:+18673354 | Msa1143240:CDS |
| TCATTATTATCACAGTGTTT+AGG | 0.379828 | 7_4:-18671812 | None:intergenic |
| GAACAAGCACTCATATTTGT+TGG | 0.400165 | 7_4:-18672679 | None:intergenic |
| CCTCCCACTTCATTTGGTAA+TGG | 0.408872 | 7_4:-18672652 | None:intergenic |
| GTCAAAATGTCATCAATAAG+AGG | 0.412824 | 7_4:-18673711 | None:intergenic |
| ATGAGATAGAAGAATGATAA+TGG | 0.416344 | 7_4:+18674086 | Msa1143240:three_prime_UTR |
| CTGCTACTTCTGCATTAGTC+AGG | 0.419516 | 7_4:+18673511 | Msa1143240:three_prime_UTR |
| CACCTTGTTACCCTTGGTCT+TGG | 0.424789 | 7_4:-18673677 | None:intergenic |
| AGTCAGGGAAATTCCAAATT+GGG | 0.427834 | 7_4:+18673527 | Msa1143240:three_prime_UTR |
| TCCACCGCCGGTCATCGTTC+CGG | 0.428343 | 7_4:-18671669 | None:intergenic |
| AACGAAGAAGACTGTGGACT+TGG | 0.429225 | 7_4:-18672736 | None:intergenic |
| CTCTTTGTTCTGAAGCTGGT+TGG | 0.433313 | 7_4:+18671846 | Msa1143240:CDS |
| TTTAGAACACAAACTTAAGT+TGG | 0.435032 | 7_4:-18673398 | None:intergenic |
| CTAAGGGGTGGAAGATTTGT+TGG | 0.437346 | 7_4:-18672862 | None:intergenic |
| TTACGTCGCGAAGGGCTTGA+TGG | 0.441756 | 7_4:-18673018 | None:intergenic |
| ATGACCGGCGGTGGATCCTC+CGG | 0.444774 | 7_4:+18671677 | Msa1143240:CDS |
| AAAGCTCTTTGTTCTGAAGC+TGG | 0.450319 | 7_4:+18671842 | Msa1143240:CDS |
| GTTTCATAAGATTAAAAGTA+GGG | 0.465742 | 7_4:-18673155 | None:intergenic |
| GAATGGTAGGAGAAAGGAAG+AGG | 0.471644 | 7_4:-18672818 | None:intergenic |
| CTCGTAGGGTATGATGGTAT+TGG | 0.473170 | 7_4:-18672766 | None:intergenic |
| TGGTGCAGAGGTAGCGAAAA+GGG | 0.473562 | 7_4:-18672998 | None:intergenic |
| GGAAGGAGGAGCTGCACCAT+GGG | 0.477201 | 7_4:-18673133 | None:intergenic |
| CTCTTCGCCGGAACGATGAC+CGG | 0.477263 | 7_4:+18671662 | Msa1143240:exon |
| AAACTAGGAGAGTGTGAAAA+GGG | 0.481245 | 7_4:+18671495 | Msa1143240:five_prime_UTR |
| CAACAAATCTTCCACCCCTT+AGG | 0.481611 | 7_4:+18672863 | Msa1143240:CDS |
| TAAGGGGTGGAAGATTTGTT+GGG | 0.482571 | 7_4:-18672861 | None:intergenic |
| GAAGAGTTGGAGCTTACTCT+AGG | 0.484349 | 7_4:+18673348 | Msa1143240:CDS |
| CAATATCACCTTGTTACCCT+TGG | 0.484481 | 7_4:-18673683 | None:intergenic |
| AATGAGGAAGATTGTGGACT+TGG | 0.485039 | 7_4:-18672712 | None:intergenic |
| GTATCATATCCATCGAACTC+TGG | 0.485353 | 7_4:-18673197 | None:intergenic |
| ATTGTTAGAGTCACGAGAAA+AGG | 0.485779 | 7_4:-18671613 | None:intergenic |
| TATCATATCCATCGAACTCT+GGG | 0.486116 | 7_4:-18673196 | None:intergenic |
| CGCATTCTGGAATGGTGGAA+GGG | 0.492428 | 7_4:-18673050 | None:intergenic |
| CGATGAGTCAGATGCTTCTA+CGG | 0.496132 | 7_4:+18673071 | Msa1143240:CDS |
| AAAACTAGGAGAGTGTGAAA+AGG | 0.497607 | 7_4:+18671494 | Msa1143240:five_prime_UTR |
| GCCGGAACGATGACCGGCGG+TGG | 0.500980 | 7_4:+18671668 | Msa1143240:exon |
| GGGTATGATGGTATTGGACT+CGG | 0.506930 | 7_4:-18672760 | None:intergenic |
| TCAGCTACTGAGAGAGGTAG+AGG | 0.507163 | 7_4:+18673252 | Msa1143240:CDS |
| GAGCACTGTTGGAAATCCTA+AGG | 0.507516 | 7_4:-18672879 | None:intergenic |
| GAACTTCTCGGAGAAGAAAG+AGG | 0.507602 | 7_4:-18672913 | None:intergenic |
| GTTAAAGGAAGCATTACAAA+GGG | 0.511164 | 7_4:-18672959 | None:intergenic |
| TGTTTGGAATGAGAGAAGAA+AGG | 0.513727 | 7_4:+18673966 | Msa1143240:three_prime_UTR |
| GAAGTTATGTTGCGGATGAA+TGG | 0.514169 | 7_4:-18672835 | None:intergenic |
| AATGGTAGGAGAAAGGAAGA+GGG | 0.515787 | 7_4:-18672817 | None:intergenic |
| CGAGGTAGGAATGGAAGAGT+TGG | 0.519042 | 7_4:+18673335 | Msa1143240:CDS |
| GAAGCCATGCAATGGAGTGC+AGG | 0.519451 | 7_4:+18673228 | Msa1143240:CDS |
| TTTCCATGTTGGTAATCTCC+CGG | 0.520653 | 7_4:-18671696 | None:intergenic |
| CCTATCTCACCCAGAAAACC+AGG | 0.522742 | 7_4:-18673475 | None:intergenic |
| CTTCTACGGTGGACTCTGGT+AGG | 0.522842 | 7_4:+18673085 | Msa1143240:CDS |
| GCGGATGAATGGTAGGAGAA+AGG | 0.522930 | 7_4:-18672824 | None:intergenic |
| ATGGTGCAGAGGTAGCGAAA+AGG | 0.528695 | 7_4:-18672999 | None:intergenic |
| TGACCGGCGGTGGATCCTCC+GGG | 0.535108 | 7_4:+18671678 | Msa1143240:CDS |
| GGTAAGTGGTTACGTCGCGA+AGG | 0.535768 | 7_4:-18673027 | None:intergenic |
| TGACTCATCGCATTCTGGAA+TGG | 0.535852 | 7_4:-18673058 | None:intergenic |
| GTTGGACTCGTAGGGTATGA+TGG | 0.536021 | 7_4:-18672772 | None:intergenic |
| TCGCATTCTGGAATGGTGGA+AGG | 0.536086 | 7_4:-18673051 | None:intergenic |
| GGTTGGATCGTTGAAGAAGA+TGG | 0.537404 | 7_4:+18671863 | Msa1143240:CDS |
| AGACTGTGGACTTGGGAATG+AGG | 0.539676 | 7_4:-18672728 | None:intergenic |
| GCATTCTGGAATGGTGGAAG+GGG | 0.540873 | 7_4:-18673049 | None:intergenic |
| CTCTTGATAATTCATTACAC+TGG | 0.542614 | 7_4:+18673744 | Msa1143240:three_prime_UTR |
| CTACGGTGGACTCTGGTAGG+TGG | 0.546694 | 7_4:+18673088 | Msa1143240:CDS |
| GAGAATTCACGAGGTAGGAA+TGG | 0.546800 | 7_4:+18673326 | Msa1143240:CDS |
| ATAAGATTAAAAGTAGGGGA+AGG | 0.548784 | 7_4:-18673150 | None:intergenic |
| TGGCGTAACAGGAGCACTGT+TGG | 0.550863 | 7_4:-18672890 | None:intergenic |
| ACGAGTCCAACTCGCATGGA+TGG | 0.553802 | 7_4:+18672784 | Msa1143240:CDS |
| ATGGCAGAGTCGTGAAGCCG+TGG | 0.556658 | 7_4:+18673295 | Msa1143240:CDS |
| TGAATTCTCTCACCTTCCCA+CGG | 0.561289 | 7_4:-18673312 | None:intergenic |
| TACGGTGGACTCTGGTAGGT+GGG | 0.563236 | 7_4:+18673089 | Msa1143240:CDS |
| GGTTTCATAAGATTAAAAGT+AGG | 0.565689 | 7_4:-18673156 | None:intergenic |
| AAGAGTTGGAGCTTACTCTA+GGG | 0.569146 | 7_4:+18673349 | Msa1143240:CDS |
| GGGAAGGAGGAGCTGCACCA+TGG | 0.569302 | 7_4:-18673134 | None:intergenic |
| TATTCAGGTTTACGAGCTCA+AGG | 0.569731 | 7_4:+18671776 | Msa1143240:CDS |
| TAATTAAGGAAGTGAAAACT+AGG | 0.570052 | 7_4:+18671480 | None:intergenic |
| TTGGAATGAGAGAAGAAAGG+AGG | 0.575997 | 7_4:+18673969 | Msa1143240:three_prime_UTR |
| GATCACTCCCCAGAGTTCGA+TGG | 0.577805 | 7_4:+18673188 | Msa1143240:CDS |
| CCCTACGAGTCCAACTCGCA+TGG | 0.578171 | 7_4:+18672780 | Msa1143240:CDS |
| TTATGTTGCGGATGAATGGT+AGG | 0.578326 | 7_4:-18672831 | None:intergenic |
| TCTAAACTCTCTCTCTTCGC+CGG | 0.578398 | 7_4:+18671650 | Msa1143240:five_prime_UTR |
| GATGCTTCTACGGTGGACTC+TGG | 0.578522 | 7_4:+18673081 | Msa1143240:CDS |
| GTAAGTGGTTACGTCGCGAA+GGG | 0.578993 | 7_4:-18673026 | None:intergenic |
| AGAGTCGTGAAGCCGTGGGA+AGG | 0.580925 | 7_4:+18673300 | Msa1143240:CDS |
| GTAATTCCATCCATGCGAGT+TGG | 0.581360 | 7_4:-18672790 | None:intergenic |
| ACGAAGAAGACTGTGGACTT+GGG | 0.581874 | 7_4:-18672735 | None:intergenic |
| GAGACCATTACCAAATGAAG+TGG | 0.582291 | 7_4:+18672648 | Msa1143240:CDS |
| CTCATCGCATTCTGGAATGG+TGG | 0.583351 | 7_4:-18673055 | None:intergenic |
| AGATTAAAAGTAGGGGAAGG+AGG | 0.584415 | 7_4:-18673147 | None:intergenic |
| AGCACTGTTGGAAATCCTAA+GGG | 0.585276 | 7_4:-18672878 | None:intergenic |
| CCTCCGGGAGATTACCAACA+TGG | 0.594081 | 7_4:+18671693 | Msa1143240:CDS |
| GGTATGATGGTATTGGACTC+GGG | 0.595404 | 7_4:-18672759 | None:intergenic |
| TCCATGCGAGTTGGACTCGT+AGG | 0.595405 | 7_4:-18672781 | None:intergenic |
| GGTGAGAGAATTCACGAGGT+AGG | 0.595934 | 7_4:+18673321 | Msa1143240:CDS |
| TGCTACTTCTGCATTAGTCA+GGG | 0.598452 | 7_4:+18673512 | Msa1143240:three_prime_UTR |
| CAGTGTAATGAATTATCAAG+AGG | 0.605589 | 7_4:-18673743 | None:intergenic |
| TTTCAGACAACAACTGCCCA+TGG | 0.605613 | 7_4:+18673117 | Msa1143240:CDS |
| GTATGAATGAAGCCATGCAA+TGG | 0.607575 | 7_4:+18673220 | Msa1143240:CDS |
| TGAACCTGCACTCCATTGCA+TGG | 0.609662 | 7_4:-18673232 | None:intergenic |
| TACCAAGACCAAGGGTAACA+AGG | 0.610250 | 7_4:+18673675 | Msa1143240:three_prime_UTR |
| ATGGTAGGAGAAAGGAAGAG+GGG | 0.614566 | 7_4:-18672816 | None:intergenic |
| TCAAACCAATCAAATATACA+AGG | 0.617106 | 7_4:-18674064 | None:intergenic |
| CCATGCGAGTTGGACTCGTA+GGG | 0.617530 | 7_4:-18672780 | None:intergenic |
| GTGCAGAGGTAGCGAAAAGG+GGG | 0.619204 | 7_4:-18672996 | None:intergenic |
| CTTGGGAATGAGGAAGATTG+TGG | 0.619428 | 7_4:-18672718 | None:intergenic |
| TACTCAATTTACAAACACAA+AGG | 0.622892 | 7_4:-18674125 | None:intergenic |
| TTGAATCTTACCAAGACCAA+GGG | 0.624750 | 7_4:+18673667 | Msa1143240:three_prime_UTR |
| GCAGGTTCAGCTACTGAGAG+AGG | 0.625141 | 7_4:+18673246 | Msa1143240:CDS |
| CATTCTGGAATGGTGGAAGG+GGG | 0.627664 | 7_4:-18673048 | None:intergenic |
| AGATGGTACTACTTATCGAA+AGG | 0.630271 | 7_4:+18671880 | Msa1143240:CDS |
| TTGGGATTGAAGTTATGTTG+CGG | 0.631769 | 7_4:-18672843 | None:intergenic |
| AGTTAAAGGAAGCATTACAA+AGG | 0.631880 | 7_4:-18672960 | None:intergenic |
| TTTGAATCTTACCAAGACCA+AGG | 0.633389 | 7_4:+18673666 | Msa1143240:three_prime_UTR |
| GGTGCAGAGGTAGCGAAAAG+GGG | 0.633761 | 7_4:-18672997 | None:intergenic |
| CTGTTGGAAATCCTAAGGGG+TGG | 0.634143 | 7_4:-18672874 | None:intergenic |
| TGAGTCAGATGCTTCTACGG+TGG | 0.636061 | 7_4:+18673074 | Msa1143240:CDS |
| CGAAGGGCTTGATGGTGCAG+AGG | 0.637998 | 7_4:-18673010 | None:intergenic |
| TTTCATAAGATTAAAAGTAG+GGG | 0.644722 | 7_4:-18673154 | None:intergenic |
| TCTCCCGGAGGATCCACCGC+CGG | 0.650116 | 7_4:-18671681 | None:intergenic |
| AGACCATTACCAAATGAAGT+GGG | 0.650170 | 7_4:+18672649 | Msa1143240:CDS |
| TGGCAGAGTCGTGAAGCCGT+GGG | 0.659403 | 7_4:+18673296 | Msa1143240:CDS |
| TTCGCCGGAACGATGACCGG+CGG | 0.661466 | 7_4:+18671665 | Msa1143240:exon |
| CTCGGGAACGAAGAAGACTG+TGG | 0.666027 | 7_4:-18672742 | None:intergenic |
| CCATGTTGGTAATCTCCCGG+AGG | 0.694898 | 7_4:-18671693 | None:intergenic |
| CCATTACCAAATGAAGTGGG+AGG | 0.695189 | 7_4:+18672652 | Msa1143240:CDS |
| GCACTGTTGGAAATCCTAAG+GGG | 0.712978 | 7_4:-18672877 | None:intergenic |
| CTTCTCGGAGAAGAAAGAGG+TGG | 0.713886 | 7_4:-18672910 | None:intergenic |
| ATCATATCCATCGAACTCTG+GGG | 0.720256 | 7_4:-18673195 | None:intergenic |
| TTACTCTTCAACAATCAACA+AGG | 0.722255 | 7_4:-18673641 | None:intergenic |
| GGAAGGTGAGAGAATTCACG+AGG | 0.745542 | 7_4:+18673317 | Msa1143240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTTCATAAAATTGATT+CGG | - | chr7_4:18672207-18672226 | None:intergenic | 10.0% |
| !!! | TTTTCCAATTTAATAGTTTA+TGG | - | chr7_4:18672527-18672546 | None:intergenic | 15.0% |
| !! | AAAGAAGAATCTACTAAAAA+AGG | + | chr7_4:18671527-18671546 | Msa1143240:five_prime_UTR | 20.0% |
| !! | ATTTAATAGTTTATGGTGTT+TGG | - | chr7_4:18672520-18672539 | None:intergenic | 20.0% |
| !! | AACACCATAAACTATTAAAT+TGG | + | chr7_4:18672520-18672539 | Msa1143240:intron | 20.0% |
| !! | TTTCATAAGATTAAAAGTAG+GGG | - | chr7_4:18673157-18673176 | None:intergenic | 20.0% |
| !! | GTTTCATAAGATTAAAAGTA+GGG | - | chr7_4:18673158-18673177 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAGTTTGCTTTAT+TGG | + | chr7_4:18673841-18673860 | Msa1143240:three_prime_UTR | 20.0% |
| !!! | TTCAATTTTGATTCTTTGTT+TGG | + | chr7_4:18673950-18673969 | Msa1143240:three_prime_UTR | 20.0% |
| ! | TCATTATTATCACAGTGTTT+AGG | - | chr7_4:18671815-18671834 | None:intergenic | 25.0% |
| ! | AATCGATCTTATAAGAAACT+TGG | + | chr7_4:18672001-18672020 | Msa1143240:intron | 25.0% |
| ! | AATCGAAGTTAAATCAATTC+TGG | - | chr7_4:18672108-18672127 | None:intergenic | 25.0% |
| !! | AGAATTGATTTAACTTCGAT+TGG | + | chr7_4:18672107-18672126 | Msa1143240:intron | 25.0% |
| ! | TGAGTAAATGAATTTGAATC+AGG | + | chr7_4:18672618-18672637 | Msa1143240:intron | 25.0% |
| ! | GAGTAAATGAATTTGAATCA+GGG | + | chr7_4:18672619-18672638 | Msa1143240:intron | 25.0% |
| ! | GGTTTCATAAGATTAAAAGT+AGG | - | chr7_4:18673159-18673178 | None:intergenic | 25.0% |
| !! | TTTAGAACACAAACTTAAGT+TGG | - | chr7_4:18673401-18673420 | None:intergenic | 25.0% |
| !!! | GAATCTGTAATTTTTTGGTA+CGG | - | chr7_4:18673431-18673450 | None:intergenic | 25.0% |
| !!! | CGATTGAATCTGTAATTTTT+TGG | - | chr7_4:18673436-18673455 | None:intergenic | 25.0% |
| !!! | CAGTTTTTTTTATATAGCTG+TGG | + | chr7_4:18673576-18673595 | Msa1143240:three_prime_UTR | 25.0% |
| !!! | TTTTTGTAGTGTGTTTGTTA+TGG | + | chr7_4:18673783-18673802 | Msa1143240:three_prime_UTR | 25.0% |
| ! | CAATAATGCAGTTACTTATA+TGG | - | chr7_4:18673867-18673886 | None:intergenic | 25.0% |
| !!! | ATTCAGTTGTTTGCTATAAT+GGG | + | chr7_4:18673904-18673923 | Msa1143240:three_prime_UTR | 25.0% |
| ! | TTTCTCCTTGTATATTTGAT+TGG | + | chr7_4:18674059-18674078 | Msa1143240:three_prime_UTR | 25.0% |
| ! | TCAAACCAATCAAATATACA+AGG | - | chr7_4:18674067-18674086 | None:intergenic | 25.0% |
| ! | ATGAGATAGAAGAATGATAA+TGG | + | chr7_4:18674086-18674105 | Msa1143240:three_prime_UTR | 25.0% |
| TTTAGTAGCTTATGTGTGTT+TGG | - | chr7_4:18672247-18672266 | None:intergenic | 30.0% | |
| CTGTTTAAGTCACATTAAGT+CGG | + | chr7_4:18672343-18672362 | Msa1143240:intron | 30.0% | |
| ! | TCGAAATCAATTTTTGTCAG+AGG | + | chr7_4:18672490-18672509 | Msa1143240:intron | 30.0% |
| !! | GTTAAAGGAAGCATTACAAA+GGG | - | chr7_4:18672962-18672981 | None:intergenic | 30.0% |
| !! | AGTTAAAGGAAGCATTACAA+AGG | - | chr7_4:18672963-18672982 | None:intergenic | 30.0% |
| ATAAGATTAAAAGTAGGGGA+AGG | - | chr7_4:18673153-18673172 | None:intergenic | 30.0% | |
| !!! | TCAGATTTTGACTTTGAGAA+TGG | + | chr7_4:18673276-18673295 | Msa1143240:CDS | 30.0% |
| !!! | AAGTTGGTTTTATCATGATC+AGG | - | chr7_4:18673385-18673404 | None:intergenic | 30.0% |
| TATTGCAATAACACCCAATT+TGG | - | chr7_4:18673543-18673562 | None:intergenic | 30.0% | |
| ! | TTTTATATAGCTGTGGTTAG+TGG | + | chr7_4:18673583-18673602 | Msa1143240:three_prime_UTR | 30.0% |
| TTACTCTTCAACAATCAACA+AGG | - | chr7_4:18673644-18673663 | None:intergenic | 30.0% | |
| GTCAAAATGTCATCAATAAG+AGG | - | chr7_4:18673714-18673733 | None:intergenic | 30.0% | |
| CAGTGTAATGAATTATCAAG+AGG | - | chr7_4:18673746-18673765 | None:intergenic | 30.0% | |
| ! | CTCTTGATAATTCATTACAC+TGG | + | chr7_4:18673744-18673763 | Msa1143240:three_prime_UTR | 30.0% |
| ACACACTACAAAAACTTAGT+TGG | - | chr7_4:18673777-18673796 | None:intergenic | 30.0% | |
| !! | GATTCAGTTGTTTGCTATAA+TGG | + | chr7_4:18673903-18673922 | Msa1143240:three_prime_UTR | 30.0% |
| ! | AAAACTAGGAGAGTGTGAAA+AGG | + | chr7_4:18671494-18671513 | Msa1143240:five_prime_UTR | 35.0% |
| ! | AAACTAGGAGAGTGTGAAAA+GGG | + | chr7_4:18671495-18671514 | Msa1143240:five_prime_UTR | 35.0% |
| ATTGTTAGAGTCACGAGAAA+AGG | - | chr7_4:18671616-18671635 | None:intergenic | 35.0% | |
| ! | TTTTCTCTCTCTTTCCATGT+TGG | - | chr7_4:18671710-18671729 | None:intergenic | 35.0% |
| ATTGCTGCTAAGATCTATTC+AGG | + | chr7_4:18671761-18671780 | Msa1143240:CDS | 35.0% | |
| AGATGGTACTACTTATCGAA+AGG | + | chr7_4:18671880-18671899 | Msa1143240:CDS | 35.0% | |
| !! | CTTGGTTTTTGTGATCTAAG+TGG | + | chr7_4:18672019-18672038 | Msa1143240:intron | 35.0% |
| AGACCATTACCAAATGAAGT+GGG | + | chr7_4:18672649-18672668 | Msa1143240:CDS | 35.0% | |
| GAACAAGCACTCATATTTGT+TGG | - | chr7_4:18672682-18672701 | None:intergenic | 35.0% | |
| TTGGGATTGAAGTTATGTTG+CGG | - | chr7_4:18672846-18672865 | None:intergenic | 35.0% | |
| TATCATATCCATCGAACTCT+GGG | - | chr7_4:18673199-18673218 | None:intergenic | 35.0% | |
| AATTCCTCAAAAAGTTTGCC+TGG | + | chr7_4:18673457-18673476 | Msa1143240:three_prime_UTR | 35.0% | |
| ! | AAAACCAGGCAAACTTTTTG+AGG | - | chr7_4:18673464-18673483 | None:intergenic | 35.0% |
| !! | AAAAAGTTTGCCTGGTTTTC+TGG | + | chr7_4:18673465-18673484 | Msa1143240:three_prime_UTR | 35.0% |
| !! | AAAAGTTTGCCTGGTTTTCT+GGG | + | chr7_4:18673466-18673485 | Msa1143240:three_prime_UTR | 35.0% |
| TAGTCAGGGAAATTCCAAAT+TGG | + | chr7_4:18673526-18673545 | Msa1143240:three_prime_UTR | 35.0% | |
| AGTCAGGGAAATTCCAAATT+GGG | + | chr7_4:18673527-18673546 | Msa1143240:three_prime_UTR | 35.0% | |
| TTTGAATCTTACCAAGACCA+AGG | + | chr7_4:18673666-18673685 | Msa1143240:three_prime_UTR | 35.0% | |
| TTGAATCTTACCAAGACCAA+GGG | + | chr7_4:18673667-18673686 | Msa1143240:three_prime_UTR | 35.0% | |
| ! | TGTTTGGAATGAGAGAAGAA+AGG | + | chr7_4:18673966-18673985 | Msa1143240:three_prime_UTR | 35.0% |
| !! | TTTCCATGTTGGTAATCTCC+CGG | - | chr7_4:18671699-18671718 | None:intergenic | 40.0% |
| ! | TATTCAGGTTTACGAGCTCA+AGG | + | chr7_4:18671776-18671795 | Msa1143240:CDS | 40.0% |
| !! | AAAGCTCTTTGTTCTGAAGC+TGG | + | chr7_4:18671842-18671861 | Msa1143240:CDS | 40.0% |
| ! | TTCATGTGCGTTTAGTTCAG+CGG | - | chr7_4:18672398-18672417 | None:intergenic | 40.0% |
| GAGACCATTACCAAATGAAG+TGG | + | chr7_4:18672648-18672667 | Msa1143240:CDS | 40.0% | |
| AATGAGGAAGATTGTGGACT+TGG | - | chr7_4:18672715-18672734 | None:intergenic | 40.0% | |
| AATGGTAGGAGAAAGGAAGA+GGG | - | chr7_4:18672820-18672839 | None:intergenic | 40.0% | |
| TTATGTTGCGGATGAATGGT+AGG | - | chr7_4:18672834-18672853 | None:intergenic | 40.0% | |
| GAAGTTATGTTGCGGATGAA+TGG | - | chr7_4:18672838-18672857 | None:intergenic | 40.0% | |
| ! | TAAGGGGTGGAAGATTTGTT+GGG | - | chr7_4:18672864-18672883 | None:intergenic | 40.0% |
| AGCACTGTTGGAAATCCTAA+GGG | - | chr7_4:18672881-18672900 | None:intergenic | 40.0% | |
| !! | GCTTTTCGCTTTGAACTTCT+CGG | - | chr7_4:18672928-18672947 | None:intergenic | 40.0% |
| AGATTAAAAGTAGGGGAAGG+AGG | - | chr7_4:18673150-18673169 | None:intergenic | 40.0% | |
| ATCATATCCATCGAACTCTG+GGG | - | chr7_4:18673198-18673217 | None:intergenic | 40.0% | |
| GTATCATATCCATCGAACTC+TGG | - | chr7_4:18673200-18673219 | None:intergenic | 40.0% | |
| GTATGAATGAAGCCATGCAA+TGG | + | chr7_4:18673220-18673239 | Msa1143240:CDS | 40.0% | |
| AAGAGTTGGAGCTTACTCTA+GGG | + | chr7_4:18673349-18673368 | Msa1143240:CDS | 40.0% | |
| ! | TGCTACTTCTGCATTAGTCA+GGG | + | chr7_4:18673512-18673531 | Msa1143240:three_prime_UTR | 40.0% |
| CAATATCACCTTGTTACCCT+TGG | - | chr7_4:18673686-18673705 | None:intergenic | 40.0% | |
| TTGGAATGAGAGAAGAAAGG+AGG | + | chr7_4:18673969-18673988 | Msa1143240:three_prime_UTR | 40.0% | |
| TCTAAACTCTCTCTCTTCGC+CGG | + | chr7_4:18671650-18671669 | Msa1143240:five_prime_UTR | 45.0% | |
| !! | CTCTTTGTTCTGAAGCTGGT+TGG | + | chr7_4:18671846-18671865 | Msa1143240:CDS | 45.0% |
| GGTTGGATCGTTGAAGAAGA+TGG | + | chr7_4:18671863-18671882 | Msa1143240:CDS | 45.0% | |
| CCTCCCACTTCATTTGGTAA+TGG | - | chr7_4:18672655-18672674 | None:intergenic | 45.0% | |
| CCATTACCAAATGAAGTGGG+AGG | + | chr7_4:18672652-18672671 | Msa1143240:CDS | 45.0% | |
| CTTGGGAATGAGGAAGATTG+TGG | - | chr7_4:18672721-18672740 | None:intergenic | 45.0% | |
| ACGAAGAAGACTGTGGACTT+GGG | - | chr7_4:18672738-18672757 | None:intergenic | 45.0% | |
| AACGAAGAAGACTGTGGACT+TGG | - | chr7_4:18672739-18672758 | None:intergenic | 45.0% | |
| ! | GGTATGATGGTATTGGACTC+GGG | - | chr7_4:18672762-18672781 | None:intergenic | 45.0% |
| ! | GGGTATGATGGTATTGGACT+CGG | - | chr7_4:18672763-18672782 | None:intergenic | 45.0% |
| CTCGTAGGGTATGATGGTAT+TGG | - | chr7_4:18672769-18672788 | None:intergenic | 45.0% | |
| GTAATTCCATCCATGCGAGT+TGG | - | chr7_4:18672793-18672812 | None:intergenic | 45.0% | |
| ATGGTAGGAGAAAGGAAGAG+GGG | - | chr7_4:18672819-18672838 | None:intergenic | 45.0% | |
| GAATGGTAGGAGAAAGGAAG+AGG | - | chr7_4:18672821-18672840 | None:intergenic | 45.0% | |
| CTAAGGGGTGGAAGATTTGT+TGG | - | chr7_4:18672865-18672884 | None:intergenic | 45.0% | |
| CAACAAATCTTCCACCCCTT+AGG | + | chr7_4:18672863-18672882 | Msa1143240:CDS | 45.0% | |
| GCACTGTTGGAAATCCTAAG+GGG | - | chr7_4:18672880-18672899 | None:intergenic | 45.0% | |
| ! | GAGCACTGTTGGAAATCCTA+AGG | - | chr7_4:18672882-18672901 | None:intergenic | 45.0% |
| GAACTTCTCGGAGAAGAAAG+AGG | - | chr7_4:18672916-18672935 | None:intergenic | 45.0% | |
| ! | TGACTCATCGCATTCTGGAA+TGG | - | chr7_4:18673061-18673080 | None:intergenic | 45.0% |
| CGATGAGTCAGATGCTTCTA+CGG | + | chr7_4:18673071-18673090 | Msa1143240:CDS | 45.0% | |
| TTTCAGACAACAACTGCCCA+TGG | + | chr7_4:18673117-18673136 | Msa1143240:CDS | 45.0% | |
| TGAATTCTCTCACCTTCCCA+CGG | - | chr7_4:18673315-18673334 | None:intergenic | 45.0% | |
| GAGAATTCACGAGGTAGGAA+TGG | + | chr7_4:18673326-18673345 | Msa1143240:CDS | 45.0% | |
| GAAGAGTTGGAGCTTACTCT+AGG | + | chr7_4:18673348-18673367 | Msa1143240:CDS | 45.0% | |
| !! | TTGGAGCTTACTCTAGGGTT+TGG | + | chr7_4:18673354-18673373 | Msa1143240:CDS | 45.0% |
| ! | CTGCTACTTCTGCATTAGTC+AGG | + | chr7_4:18673511-18673530 | Msa1143240:three_prime_UTR | 45.0% |
| TACCAAGACCAAGGGTAACA+AGG | + | chr7_4:18673675-18673694 | Msa1143240:three_prime_UTR | 45.0% | |
| GGAGTTCCTCCCACTTCATT+TGG | - | chr7_4:18672661-18672680 | None:intergenic | 50.0% | |
| AGACTGTGGACTTGGGAATG+AGG | - | chr7_4:18672731-18672750 | None:intergenic | 50.0% | |
| GTTGGACTCGTAGGGTATGA+TGG | - | chr7_4:18672775-18672794 | None:intergenic | 50.0% | |
| GCGGATGAATGGTAGGAGAA+AGG | - | chr7_4:18672827-18672846 | None:intergenic | 50.0% | |
| CTGTTGGAAATCCTAAGGGG+TGG | - | chr7_4:18672877-18672896 | None:intergenic | 50.0% | |
| GAAGAAAGAGGTGGCGTAAC+AGG | - | chr7_4:18672904-18672923 | None:intergenic | 50.0% | |
| CTTCTCGGAGAAGAAAGAGG+TGG | - | chr7_4:18672913-18672932 | None:intergenic | 50.0% | |
| GTGGCGAAACGTGGAGTTAA+AGG | - | chr7_4:18672977-18672996 | None:intergenic | 50.0% | |
| TGGTGCAGAGGTAGCGAAAA+GGG | - | chr7_4:18673001-18673020 | None:intergenic | 50.0% | |
| ATGGTGCAGAGGTAGCGAAA+AGG | - | chr7_4:18673002-18673021 | None:intergenic | 50.0% | |
| GTAAGTGGTTACGTCGCGAA+GGG | - | chr7_4:18673029-18673048 | None:intergenic | 50.0% | |
| !! | CATTCTGGAATGGTGGAAGG+GGG | - | chr7_4:18673051-18673070 | None:intergenic | 50.0% |
| !! | GCATTCTGGAATGGTGGAAG+GGG | - | chr7_4:18673052-18673071 | None:intergenic | 50.0% |
| !! | CGCATTCTGGAATGGTGGAA+GGG | - | chr7_4:18673053-18673072 | None:intergenic | 50.0% |
| !! | TCGCATTCTGGAATGGTGGA+AGG | - | chr7_4:18673054-18673073 | None:intergenic | 50.0% |
| !! | CTCATCGCATTCTGGAATGG+TGG | - | chr7_4:18673058-18673077 | None:intergenic | 50.0% |
| GCATCTGACTCATCGCATTC+TGG | - | chr7_4:18673066-18673085 | None:intergenic | 50.0% | |
| TGAGTCAGATGCTTCTACGG+TGG | + | chr7_4:18673074-18673093 | Msa1143240:CDS | 50.0% | |
| TGAACCTGCACTCCATTGCA+TGG | - | chr7_4:18673235-18673254 | None:intergenic | 50.0% | |
| TCAGCTACTGAGAGAGGTAG+AGG | + | chr7_4:18673252-18673271 | Msa1143240:CDS | 50.0% | |
| GGAAGGTGAGAGAATTCACG+AGG | + | chr7_4:18673317-18673336 | Msa1143240:CDS | 50.0% | |
| GGTGAGAGAATTCACGAGGT+AGG | + | chr7_4:18673321-18673340 | Msa1143240:CDS | 50.0% | |
| CGAGGTAGGAATGGAAGAGT+TGG | + | chr7_4:18673335-18673354 | Msa1143240:CDS | 50.0% | |
| CCTATCTCACCCAGAAAACC+AGG | - | chr7_4:18673478-18673497 | None:intergenic | 50.0% | |
| !! | CCTGGTTTTCTGGGTGAGAT+AGG | + | chr7_4:18673475-18673494 | Msa1143240:three_prime_UTR | 50.0% |
| CACCTTGTTACCCTTGGTCT+TGG | - | chr7_4:18673680-18673699 | None:intergenic | 50.0% | |
| !! | CCATGTTGGTAATCTCCCGG+AGG | - | chr7_4:18671696-18671715 | None:intergenic | 55.0% |
| CCTCCGGGAGATTACCAACA+TGG | + | chr7_4:18671693-18671712 | Msa1143240:CDS | 55.0% | |
| CTCGGGAACGAAGAAGACTG+TGG | - | chr7_4:18672745-18672764 | None:intergenic | 55.0% | |
| ! | CCATGCGAGTTGGACTCGTA+GGG | - | chr7_4:18672783-18672802 | None:intergenic | 55.0% |
| ! | TCCATGCGAGTTGGACTCGT+AGG | - | chr7_4:18672784-18672803 | None:intergenic | 55.0% |
| ACGAGTCCAACTCGCATGGA+TGG | + | chr7_4:18672784-18672803 | Msa1143240:CDS | 55.0% | |
| !! | TGGCGTAACAGGAGCACTGT+TGG | - | chr7_4:18672893-18672912 | None:intergenic | 55.0% |
| GTGCAGAGGTAGCGAAAAGG+GGG | - | chr7_4:18672999-18673018 | None:intergenic | 55.0% | |
| GGTGCAGAGGTAGCGAAAAG+GGG | - | chr7_4:18673000-18673019 | None:intergenic | 55.0% | |
| TTACGTCGCGAAGGGCTTGA+TGG | - | chr7_4:18673021-18673040 | None:intergenic | 55.0% | |
| GGTAAGTGGTTACGTCGCGA+AGG | - | chr7_4:18673030-18673049 | None:intergenic | 55.0% | |
| ! | GAATGGTGGAAGGGGGTAAG+TGG | - | chr7_4:18673044-18673063 | None:intergenic | 55.0% |
| ! | GATGCTTCTACGGTGGACTC+TGG | + | chr7_4:18673081-18673100 | Msa1143240:CDS | 55.0% |
| ! | CTTCTACGGTGGACTCTGGT+AGG | + | chr7_4:18673085-18673104 | Msa1143240:CDS | 55.0% |
| ! | TACGGTGGACTCTGGTAGGT+GGG | + | chr7_4:18673089-18673108 | Msa1143240:CDS | 55.0% |
| TGGGGAGTGATCTGCATTGC+TGG | - | chr7_4:18673180-18673199 | None:intergenic | 55.0% | |
| GATCACTCCCCAGAGTTCGA+TGG | + | chr7_4:18673188-18673207 | Msa1143240:CDS | 55.0% | |
| GAAGCCATGCAATGGAGTGC+AGG | + | chr7_4:18673228-18673247 | Msa1143240:CDS | 55.0% | |
| GCAGGTTCAGCTACTGAGAG+AGG | + | chr7_4:18673246-18673265 | Msa1143240:CDS | 55.0% | |
| CTCTTCGCCGGAACGATGAC+CGG | + | chr7_4:18671662-18671681 | Msa1143240:exon | 60.0% | |
| CCCTACGAGTCCAACTCGCA+TGG | + | chr7_4:18672780-18672799 | Msa1143240:CDS | 60.0% | |
| GAAAAGGGGGTGGCGAAACG+TGG | - | chr7_4:18672986-18673005 | None:intergenic | 60.0% | |
| CAGAGGTAGCGAAAAGGGGG+TGG | - | chr7_4:18672996-18673015 | None:intergenic | 60.0% | |
| !! | CGAAGGGCTTGATGGTGCAG+AGG | - | chr7_4:18673013-18673032 | None:intergenic | 60.0% |
| ! | CTACGGTGGACTCTGGTAGG+TGG | + | chr7_4:18673088-18673107 | Msa1143240:CDS | 60.0% |
| GGAAGGAGGAGCTGCACCAT+GGG | - | chr7_4:18673136-18673155 | None:intergenic | 60.0% | |
| ATGGCAGAGTCGTGAAGCCG+TGG | + | chr7_4:18673295-18673314 | Msa1143240:CDS | 60.0% | |
| TGGCAGAGTCGTGAAGCCGT+GGG | + | chr7_4:18673296-18673315 | Msa1143240:CDS | 60.0% | |
| AGAGTCGTGAAGCCGTGGGA+AGG | + | chr7_4:18673300-18673319 | Msa1143240:CDS | 60.0% | |
| TTCGCCGGAACGATGACCGG+CGG | + | chr7_4:18671665-18671684 | Msa1143240:exon | 65.0% | |
| TCCACCGCCGGTCATCGTTC+CGG | - | chr7_4:18671672-18671691 | None:intergenic | 65.0% | |
| ATGACCGGCGGTGGATCCTC+CGG | + | chr7_4:18671677-18671696 | Msa1143240:CDS | 65.0% | |
| GGGAAGGAGGAGCTGCACCA+TGG | - | chr7_4:18673137-18673156 | None:intergenic | 65.0% | |
| TGACCGGCGGTGGATCCTCC+GGG | + | chr7_4:18671678-18671697 | Msa1143240:CDS | 70.0% | |
| TCTCCCGGAGGATCCACCGC+CGG | - | chr7_4:18671684-18671703 | None:intergenic | 70.0% | |
| GCCGGAACGATGACCGGCGG+TGG | + | chr7_4:18671668-18671687 | Msa1143240:exon | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 18671493 | 18674139 | 18671493 | ID=Msa1143240;Name=Msa1143240 |
| chr7_4 | mRNA | 18671493 | 18674139 | 18671493 | ID=Msa1143240-mRNA-1;Parent=Msa1143240;Name=Msa1143240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=184|1|1|1|1|1|2|753|323 |
| chr7_4 | exon | 18671493 | 18671901 | 18671493 | ID=Msa1143240-mRNA-1:exon:4107;Parent=Msa1143240-mRNA-1 |
| chr7_4 | exon | 18672640 | 18674139 | 18672640 | ID=Msa1143240-mRNA-1:exon:4108;Parent=Msa1143240-mRNA-1 |
| chr7_4 | five_prime_UTR | 18671493 | 18671676 | 18671493 | ID=Msa1143240-mRNA-1:five_prime_utr;Parent=Msa1143240-mRNA-1 |
| chr7_4 | CDS | 18671677 | 18671901 | 18671677 | ID=Msa1143240-mRNA-1:cds;Parent=Msa1143240-mRNA-1 |
| chr7_4 | CDS | 18672640 | 18673386 | 18672640 | ID=Msa1143240-mRNA-1:cds;Parent=Msa1143240-mRNA-1 |
| chr7_4 | three_prime_UTR | 18673387 | 18674139 | 18673387 | ID=Msa1143240-mRNA-1:three_prime_utr;Parent=Msa1143240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
