Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0261250 | XP_003597072.1 | 95.595 | 227 | 6 | 2 | 52 | 277 | 1 | 224 | 1.42e-154 | 440 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0261250 | sp|Q8VYN9|PHO32_ARATH | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 5.17e-65 | 206 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0261250 | G7IRL4 | 95.595 | 227 | 6 | 2 | 52 | 277 | 1 | 224 | 6.76e-155 | 440 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003470 | Msa0261250 | -0.823832 | 1.120190e-53 | -8.615850e-47 |
Msa0008850 | Msa0261250 | -0.833425 | 5.374206e-56 | -8.615850e-47 |
Msa0017120 | Msa0261250 | -0.818918 | 1.525259e-52 | -8.615850e-47 |
Msa0020630 | Msa0261250 | -0.837247 | 5.817386e-57 | -8.615850e-47 |
Msa0024680 | Msa0261250 | -0.807372 | 5.219866e-50 | -8.615850e-47 |
Msa0027540 | Msa0261250 | -0.851980 | 6.231925e-61 | -8.615850e-47 |
Msa0037820 | Msa0261250 | -0.819350 | 1.216592e-52 | -8.615850e-47 |
Msa0038350 | Msa0261250 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
Msa0043680 | Msa0261250 | -0.800764 | 1.236680e-48 | -8.615850e-47 |
Msa0044710 | Msa0261250 | -0.819204 | 1.313050e-52 | -8.615850e-47 |
Msa0047470 | Msa0261250 | -0.804950 | 1.688570e-49 | -8.615850e-47 |
Msa0050720 | Msa0261250 | -0.831969 | 1.234768e-55 | -8.615850e-47 |
Msa0050770 | Msa0261250 | -0.819279 | 1.262201e-52 | -8.615850e-47 |
Msa0065390 | Msa0261250 | -0.800087 | 1.698924e-48 | -8.615850e-47 |
Msa0067150 | Msa0261250 | -0.830367 | 3.055940e-55 | -8.615850e-47 |
Msa0068410 | Msa0261250 | -0.810361 | 1.197896e-50 | -8.615850e-47 |
Msa0075310 | Msa0261250 | -0.853946 | 1.707202e-61 | -8.615850e-47 |
Msa0078090 | Msa0261250 | -0.802081 | 6.643820e-49 | -8.615850e-47 |
Msa0079250 | Msa0261250 | -0.819087 | 1.396001e-52 | -8.615850e-47 |
Msa0083160 | Msa0261250 | -0.802110 | 6.552700e-49 | -8.615850e-47 |
Msa0084630 | Msa0261250 | -0.819708 | 1.008039e-52 | -8.615850e-47 |
Msa0084680 | Msa0261250 | -0.858541 | 7.674451e-63 | -8.615850e-47 |
Msa0092660 | Msa0261250 | -0.815540 | 8.774042e-52 | -8.615850e-47 |
Msa0092730 | Msa0261250 | -0.807240 | 5.567198e-50 | -8.615850e-47 |
Msa0114250 | Msa0261250 | -0.814077 | 1.851588e-51 | -8.615850e-47 |
Msa0120330 | Msa0261250 | -0.805119 | 1.556936e-49 | -8.615850e-47 |
Msa0132180 | Msa0261250 | -0.836967 | 6.860599e-57 | -8.615850e-47 |
Msa0143080 | Msa0261250 | -0.816580 | 5.139879e-52 | -8.615850e-47 |
Msa0145950 | Msa0261250 | -0.816490 | 5.384925e-52 | -8.615850e-47 |
Msa0146470 | Msa0261250 | -0.810130 | 1.343033e-50 | -8.615850e-47 |
Msa0149500 | Msa0261250 | -0.818222 | 2.193809e-52 | -8.615850e-47 |
Msa0159750 | Msa0261250 | -0.836746 | 7.808937e-57 | -8.615850e-47 |
Msa0162770 | Msa0261250 | 0.818929 | 1.516437e-52 | -8.615850e-47 |
Msa0168100 | Msa0261250 | -0.841408 | 4.839194e-58 | -8.615850e-47 |
Msa0168640 | Msa0261250 | 0.812637 | 3.835613e-51 | -8.615850e-47 |
Msa0176710 | Msa0261250 | -0.806641 | 7.454670e-50 | -8.615850e-47 |
Msa0178940 | Msa0261250 | -0.812814 | 3.507691e-51 | -8.615850e-47 |
Msa0182930 | Msa0261250 | -0.816107 | 6.559064e-52 | -8.615850e-47 |
Msa0185390 | Msa0261250 | -0.846234 | 2.468358e-59 | -8.615850e-47 |
Msa0200950 | Msa0261250 | 0.828191 | 1.031077e-54 | -8.615850e-47 |
Msa0207000 | Msa0261250 | -0.830070 | 3.611377e-55 | -8.615850e-47 |
Msa0222070 | Msa0261250 | -0.834586 | 2.752054e-56 | -8.615850e-47 |
Msa0222120 | Msa0261250 | -0.837480 | 5.069387e-57 | -8.615850e-47 |
Msa0223960 | Msa0261250 | -0.802656 | 5.059576e-49 | -8.615850e-47 |
Msa0224960 | Msa0261250 | -0.807345 | 5.290326e-50 | -8.615850e-47 |
Msa0225010 | Msa0261250 | -0.828907 | 6.926178e-55 | -8.615850e-47 |
Msa0227290 | Msa0261250 | -0.809947 | 1.470818e-50 | -8.615850e-47 |
Msa0227490 | Msa0261250 | -0.802136 | 6.473349e-49 | -8.615850e-47 |
Msa0252180 | Msa0261250 | -0.837200 | 5.980567e-57 | -8.615850e-47 |
Msa0258670 | Msa0261250 | 0.832133 | 1.124580e-55 | -8.615850e-47 |
Msa0259330 | Msa0261250 | -0.824961 | 6.077806e-54 | -8.615850e-47 |
Msa0261250 | Msa0263620 | -0.838643 | 2.545690e-57 | -8.615850e-47 |
Msa0261250 | Msa0265210 | -0.803550 | 3.305046e-49 | -8.615850e-47 |
Msa0261250 | Msa0265580 | -0.832181 | 1.094344e-55 | -8.615850e-47 |
Msa0261250 | Msa0265980 | 0.817236 | 3.660717e-52 | -8.615850e-47 |
Msa0261250 | Msa0275030 | -0.814711 | 1.340548e-51 | -8.615850e-47 |
Msa0261250 | Msa0278620 | -0.811958 | 5.395877e-51 | -8.615850e-47 |
Msa0261250 | Msa0288240 | -0.828982 | 6.640390e-55 | -8.615850e-47 |
Msa0261250 | Msa0288330 | -0.841332 | 5.065978e-58 | -8.615850e-47 |
Msa0261250 | Msa0296000 | -0.824644 | 7.217493e-54 | -8.615850e-47 |
Msa0261250 | Msa0298970 | -0.824093 | 9.728740e-54 | -8.615850e-47 |
Msa0261250 | Msa0301180 | -0.827660 | 1.384047e-54 | -8.615850e-47 |
Msa0261250 | Msa0301460 | -0.803740 | 3.018291e-49 | -8.615850e-47 |
Msa0261250 | Msa0303440 | -0.821614 | 3.676159e-53 | -8.615850e-47 |
Msa0261250 | Msa0309650 | 0.801403 | 9.155857e-49 | -8.615850e-47 |
Msa0261250 | Msa0317260 | -0.802807 | 4.708576e-49 | -8.615850e-47 |
Msa0261250 | Msa0318000 | -0.815987 | 6.975290e-52 | -8.615850e-47 |
Msa0261250 | Msa0320540 | -0.816062 | 6.710278e-52 | -8.615850e-47 |
Msa0261250 | Msa0323990 | -0.810488 | 1.124208e-50 | -8.615850e-47 |
Msa0261250 | Msa0326670 | -0.835768 | 1.384410e-56 | -8.615850e-47 |
Msa0261250 | Msa0333900 | -0.803982 | 2.687593e-49 | -8.615850e-47 |
Msa0261250 | Msa0334020 | -0.806878 | 6.642451e-50 | -8.615850e-47 |
Msa0261250 | Msa0336860 | 0.946811 | 2.261650e-105 | -8.615850e-47 |
Msa0261250 | Msa0339860 | -0.806333 | 8.655218e-50 | -8.615850e-47 |
Msa0261250 | Msa0340550 | -0.805635 | 1.213917e-49 | -8.615850e-47 |
Msa0261250 | Msa0341460 | 0.805284 | 1.437728e-49 | -8.615850e-47 |
Msa0261250 | Msa0352510 | -0.802519 | 5.398905e-49 | -8.615850e-47 |
Msa0261250 | Msa0377280 | -0.803341 | 3.651368e-49 | -8.615850e-47 |
Msa0261250 | Msa0378340 | -0.801083 | 1.064551e-48 | -8.615850e-47 |
Msa0261250 | Msa0381950 | 0.806739 | 7.105007e-50 | -8.615850e-47 |
Msa0261250 | Msa0382500 | -0.837103 | 6.331858e-57 | -8.615850e-47 |
Msa0261250 | Msa0417630 | -0.827081 | 1.905133e-54 | -8.615850e-47 |
Msa0261250 | Msa0421800 | -0.831328 | 1.776106e-55 | -8.615850e-47 |
Msa0261250 | Msa0423360 | 0.822883 | 1.866825e-53 | -8.615850e-47 |
Msa0261250 | Msa0427590 | -0.830040 | 3.673972e-55 | -8.615850e-47 |
Msa0261250 | Msa0427690 | -0.801745 | 7.788604e-49 | -8.615850e-47 |
Msa0261250 | Msa0431380 | 0.807591 | 4.689904e-50 | -8.615850e-47 |
Msa0261250 | Msa0431430 | -0.812736 | 3.648069e-51 | -8.615850e-47 |
Msa0261250 | Msa0432680 | -0.828177 | 1.039034e-54 | -8.615850e-47 |
Msa0261250 | Msa0448080 | -0.801596 | 8.358682e-49 | -8.615850e-47 |
Msa0261250 | Msa0448120 | -0.800904 | 1.157859e-48 | -8.615850e-47 |
Msa0261250 | Msa0462590 | -0.807462 | 4.996235e-50 | -8.615850e-47 |
Msa0261250 | Msa0463590 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
Msa0261250 | Msa0467800 | -0.816797 | 4.594595e-52 | -8.615850e-47 |
Msa0261250 | Msa0467880 | -0.809004 | 2.344610e-50 | -8.615850e-47 |
Msa0261250 | Msa0469910 | 0.810141 | 1.336106e-50 | -8.615850e-47 |
Msa0261250 | Msa0476420 | 0.806692 | 7.271991e-50 | -8.615850e-47 |
Msa0261250 | Msa0479230 | -0.810513 | 1.110213e-50 | -8.615850e-47 |
Msa0261250 | Msa0482680 | -0.834691 | 2.589064e-56 | -8.615850e-47 |
Msa0261250 | Msa0485280 | -0.815872 | 7.397825e-52 | -8.615850e-47 |
Msa0261250 | Msa0511720 | 0.827024 | 1.966052e-54 | -8.615850e-47 |
Msa0261250 | Msa0514260 | -0.832158 | 1.108565e-55 | -8.615850e-47 |
Msa0261250 | Msa0518160 | -0.830702 | 2.530504e-55 | -8.615850e-47 |
Msa0261250 | Msa0518520 | -0.800463 | 1.424419e-48 | -8.615850e-47 |
Msa0261250 | Msa0519200 | -0.802696 | 4.962426e-49 | -8.615850e-47 |
Msa0261250 | Msa0520320 | -0.820885 | 5.414380e-53 | -8.615850e-47 |
Msa0261250 | Msa0520430 | 0.804973 | 1.670439e-49 | -8.615850e-47 |
Msa0261250 | Msa0524050 | -0.817481 | 3.225261e-52 | -8.615850e-47 |
Msa0261250 | Msa0524120 | -0.811064 | 8.439776e-51 | -8.615850e-47 |
Msa0261250 | Msa0526640 | 0.825988 | 3.470526e-54 | -8.615850e-47 |
Msa0261250 | Msa0530950 | -0.810148 | 1.331480e-50 | -8.615850e-47 |
Msa0261250 | Msa0535450 | -0.810534 | 1.099141e-50 | -8.615850e-47 |
Msa0261250 | Msa0546380 | -0.831061 | 2.066303e-55 | -8.615850e-47 |
Msa0261250 | Msa0546740 | -0.822165 | 2.740352e-53 | -8.615850e-47 |
Msa0261250 | Msa0553220 | 0.806094 | 9.719556e-50 | -8.615850e-47 |
Msa0261250 | Msa0562300 | 0.818587 | 1.813870e-52 | -8.615850e-47 |
Msa0261250 | Msa0564930 | -0.823939 | 1.057024e-53 | -8.615850e-47 |
Msa0261250 | Msa0576420 | -0.809959 | 1.461818e-50 | -8.615850e-47 |
Msa0261250 | Msa0583740 | -0.845622 | 3.621291e-59 | -8.615850e-47 |
Msa0261250 | Msa0583940 | -0.801640 | 8.186798e-49 | -8.615850e-47 |
Msa0261250 | Msa0590680 | -0.807584 | 4.707082e-50 | -8.615850e-47 |
Msa0261250 | Msa0591770 | -0.814026 | 1.899562e-51 | -8.615850e-47 |
Msa0261250 | Msa0597340 | -0.805974 | 1.029936e-49 | -8.615850e-47 |
Msa0261250 | Msa0607280 | -0.802361 | 5.817661e-49 | -8.615850e-47 |
Msa0261250 | Msa0607340 | 0.834869 | 2.335553e-56 | -8.615850e-47 |
Msa0261250 | Msa0614230 | -0.827948 | 1.179788e-54 | -8.615850e-47 |
Msa0261250 | Msa0618010 | -0.811946 | 5.427467e-51 | -8.615850e-47 |
Msa0261250 | Msa0638710 | -0.806046 | 9.950657e-50 | -8.615850e-47 |
Msa0261250 | Msa0642650 | -0.828578 | 8.318462e-55 | -8.615850e-47 |
Msa0261250 | Msa0647450 | 0.813721 | 2.217415e-51 | -8.615850e-47 |
Msa0261250 | Msa0655660 | 0.824816 | 6.575929e-54 | -8.615850e-47 |
Msa0261250 | Msa0657050 | -0.800102 | 1.687289e-48 | -8.615850e-47 |
Msa0261250 | Msa0669220 | -0.808243 | 3.408772e-50 | -8.615850e-47 |
Msa0261250 | Msa0669850 | -0.818616 | 1.786604e-52 | -8.615850e-47 |
Msa0261250 | Msa0681890 | -0.824247 | 8.950332e-54 | -8.615850e-47 |
Msa0261250 | Msa0690350 | -0.801216 | 9.995145e-49 | -8.615850e-47 |
Msa0261250 | Msa0702070 | -0.823100 | 1.660850e-53 | -8.615850e-47 |
Msa0261250 | Msa0702120 | -0.803213 | 3.879954e-49 | -8.615850e-47 |
Msa0261250 | Msa0703720 | -0.816886 | 4.387301e-52 | -8.615850e-47 |
Msa0261250 | Msa0703760 | -0.816355 | 5.771446e-52 | -8.615850e-47 |
Msa0261250 | Msa0704220 | -0.825409 | 4.761910e-54 | -8.615850e-47 |
Msa0261250 | Msa0714600 | -0.834999 | 2.166117e-56 | -8.615850e-47 |
Msa0261250 | Msa0720270 | -0.805717 | 1.166823e-49 | -8.615850e-47 |
Msa0261250 | Msa0730180 | -0.817930 | 2.553419e-52 | -8.615850e-47 |
Msa0261250 | Msa0733000 | -0.807093 | 5.980868e-50 | -8.615850e-47 |
Msa0261250 | Msa0769830 | -0.827835 | 1.256385e-54 | -8.615850e-47 |
Msa0261250 | Msa0789270 | -0.822527 | 2.258889e-53 | -8.615850e-47 |
Msa0261250 | Msa0789280 | -0.821403 | 4.112623e-53 | -8.615850e-47 |
Msa0261250 | Msa0789290 | -0.821646 | 3.613849e-53 | -8.615850e-47 |
Msa0261250 | Msa0789300 | -0.817072 | 3.985983e-52 | -8.615850e-47 |
Msa0261250 | Msa0792790 | 0.809933 | 1.481154e-50 | -8.615850e-47 |
Msa0261250 | Msa0809300 | -0.800452 | 1.431642e-48 | -8.615850e-47 |
Msa0261250 | Msa0828570 | -0.819752 | 9.849553e-53 | -8.615850e-47 |
Msa0261250 | Msa0848760 | -0.820060 | 8.374575e-53 | -8.615850e-47 |
Msa0261250 | Msa0861040 | 0.850205 | 1.973542e-60 | -8.615850e-47 |
Msa0261250 | Msa0874760 | -0.804237 | 2.378779e-49 | -8.615850e-47 |
Msa0261250 | Msa0877420 | -0.803736 | 3.024028e-49 | -8.615850e-47 |
Msa0261250 | Msa0878980 | 0.848266 | 6.839970e-60 | -8.615850e-47 |
Msa0261250 | Msa0890250 | -0.828050 | 1.114760e-54 | -8.615850e-47 |
Msa0261250 | Msa0899700 | -0.829149 | 6.049451e-55 | -8.615850e-47 |
Msa0261250 | Msa0907700 | -0.809815 | 1.570550e-50 | -8.615850e-47 |
Msa0261250 | Msa0909710 | -0.815507 | 8.921767e-52 | -8.615850e-47 |
Msa0261250 | Msa0925160 | -0.839937 | 1.174800e-57 | -8.615850e-47 |
Msa0261250 | Msa0937940 | -0.801759 | 7.736131e-49 | -8.615850e-47 |
Msa0261250 | Msa0955260 | -0.837952 | 3.836023e-57 | -8.615850e-47 |
Msa0261250 | Msa0971860 | -0.820520 | 6.568771e-53 | -8.615850e-47 |
Msa0261250 | Msa0972730 | -0.806169 | 9.374660e-50 | -8.615850e-47 |
Msa0261250 | Msa0975080 | -0.814080 | 1.848217e-51 | -8.615850e-47 |
Msa0261250 | Msa0981770 | -0.805783 | 1.129942e-49 | -8.615850e-47 |
Msa0261250 | Msa0990520 | -0.845793 | 3.253041e-59 | -8.615850e-47 |
Msa0261250 | Msa1001780 | -0.838468 | 2.824304e-57 | -8.615850e-47 |
Msa0261250 | Msa1002040 | -0.808270 | 3.363193e-50 | -8.615850e-47 |
Msa0261250 | Msa1037060 | 0.847349 | 1.223528e-59 | -8.615850e-47 |
Msa0261250 | Msa1038320 | -0.848473 | 5.993931e-60 | -8.615850e-47 |
Msa0261250 | Msa1044340 | -0.807812 | 4.209549e-50 | -8.615850e-47 |
Msa0261250 | Msa1089530 | -0.809611 | 1.736973e-50 | -8.615850e-47 |
Msa0261250 | Msa1118150 | -0.805721 | 1.164538e-49 | -8.615850e-47 |
Msa0261250 | Msa1118980 | -0.802044 | 6.763104e-49 | -8.615850e-47 |
Msa0261250 | Msa1119720 | -0.831353 | 1.751935e-55 | -8.615850e-47 |
Msa0261250 | Msa1125780 | -0.805262 | 1.453533e-49 | -8.615850e-47 |
Msa0261250 | Msa1125950 | -0.806195 | 9.256263e-50 | -8.615850e-47 |
Msa0261250 | Msa1130210 | 0.801816 | 7.533234e-49 | -8.615850e-47 |
Msa0261250 | Msa1140010 | -0.816010 | 6.894380e-52 | -8.615850e-47 |
Msa0261250 | Msa1143240 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
Msa0261250 | Msa1154330 | -0.835389 | 1.726292e-56 | -8.615850e-47 |
Msa0261250 | Msa1164800 | 0.849671 | 2.783735e-60 | -8.615850e-47 |
Msa0261250 | Msa1171340 | -0.818332 | 2.071403e-52 | -8.615850e-47 |
Msa0261250 | Msa1177240 | -0.855843 | 4.807123e-62 | -8.615850e-47 |
Msa0261250 | Msa1183390 | -0.803028 | 4.238527e-49 | -8.615850e-47 |
Msa0261250 | Msa1210640 | -0.806730 | 7.137472e-50 | -8.615850e-47 |
Msa0261250 | Msa1210770 | -0.820705 | 5.956093e-53 | -8.615850e-47 |
Msa0261250 | Msa1220450 | 0.805143 | 1.538904e-49 | -8.615850e-47 |
Msa0261250 | Msa1220460 | 0.805555 | 1.261574e-49 | -8.615850e-47 |
Msa0261250 | Msa1220480 | 0.807660 | 4.535976e-50 | -8.615850e-47 |
Msa0261250 | Msa1222030 | 0.824029 | 1.007238e-53 | -8.615850e-47 |
Msa0261250 | Msa1223460 | -0.801326 | 9.493594e-49 | -8.615850e-47 |
Msa0261250 | Msa1224670 | -0.838864 | 2.232506e-57 | -8.615850e-47 |
Msa0261250 | Msa1237030 | -0.807186 | 5.717265e-50 | -8.615850e-47 |
Msa0261250 | Msa1245120 | 0.833973 | 3.919280e-56 | -8.615850e-47 |
Msa0261250 | Msa1263030 | -0.805658 | 1.200151e-49 | -8.615850e-47 |
Msa0261250 | Msa1263590 | -0.824642 | 7.227708e-54 | -8.615850e-47 |
Msa0261250 | Msa1263670 | -0.821539 | 3.826324e-53 | -8.615850e-47 |
Msa0261250 | Msa1265960 | -0.842743 | 2.146361e-58 | -8.615850e-47 |
Msa0261250 | Msa1293050 | -0.805309 | 1.420784e-49 | -8.615850e-47 |
Msa0261250 | Msa1293530 | -0.808131 | 3.601553e-50 | -8.615850e-47 |
Msa0261250 | Msa1299160 | -0.816252 | 6.087523e-52 | -8.615850e-47 |
Msa0261250 | Msa1317030 | -0.841274 | 5.246932e-58 | -8.615850e-47 |
Msa0261250 | Msa1323060 | -0.803828 | 2.893824e-49 | -8.615850e-47 |
Msa0261250 | Msa1335970 | 0.808702 | 2.719608e-50 | -8.615850e-47 |
Msa0261250 | Msa1337090 | -0.820730 | 5.878136e-53 | -8.615850e-47 |
Msa0261250 | Msa1341930 | -0.802986 | 4.324455e-49 | -8.615850e-47 |
Msa0261250 | Msa1352290 | -0.818066 | 2.379715e-52 | -8.615850e-47 |
Msa0261250 | Msa1371320 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
Msa0261250 | Msa1373510 | -0.802849 | 4.616114e-49 | -8.615850e-47 |
Msa0261250 | Msa1376350 | -0.803999 | 2.665612e-49 | -8.615850e-47 |
Msa0261250 | Msa1376640 | -0.800093 | 1.694337e-48 | -8.615850e-47 |
Msa0261250 | Msa1380720 | -0.811798 | 5.846063e-51 | -8.615850e-47 |
Msa0261250 | Msa1381130 | -0.848006 | 8.065463e-60 | -8.615850e-47 |
Msa0261250 | Msa1382720 | -0.831117 | 2.002059e-55 | -8.615850e-47 |
Msa0261250 | Msa1400700 | 0.834713 | 2.556791e-56 | -8.615850e-47 |
Msa0261250 | Msa1405770 | -0.814000 | 1.925186e-51 | -8.615850e-47 |
Msa0261250 | Msa1406230 | -0.832798 | 7.697966e-56 | -8.615850e-47 |
Msa0261250 | Msa1412080 | -0.813027 | 3.150139e-51 | -8.615850e-47 |
Msa0261250 | Msa1415240 | 0.803219 | 3.870353e-49 | -8.615850e-47 |
Msa0261250 | Msa1418200 | -0.802954 | 4.389871e-49 | -8.615850e-47 |
Msa0261250 | Msa1423230 | -0.818182 | 2.239697e-52 | -8.615850e-47 |
Msa0261250 | Msa1423550 | -0.820530 | 6.535163e-53 | -8.615850e-47 |
Msa0261250 | Msa1430600 | -0.816787 | 4.618983e-52 | -8.615850e-47 |
Msa0261250 | Msa1431000 | -0.836672 | 8.158479e-57 | -8.615850e-47 |
Msa0261250 | Msa1432640 | -0.813403 | 2.605739e-51 | -8.615850e-47 |
Msa0261250 | Msa1440610 | -0.823910 | 1.073662e-53 | -8.615850e-47 |
Msa0261250 | Msa1449880 | -0.852651 | 4.014825e-61 | -8.615850e-47 |
Msa0261250 | Msa1453620 | -0.812568 | 3.971775e-51 | -8.615850e-47 |
Msa0261250 | Msa1454110 | -0.801851 | 7.409649e-49 | -8.615850e-47 |
Msa0261250 | Msa1458330 | -0.810696 | 1.013770e-50 | -8.615850e-47 |
Msa0261250 | Msa1458920 | -0.837690 | 4.479226e-57 | -8.615850e-47 |
Msa0261250 | Msa1464560 | -0.815663 | 8.238965e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0261250 | MtrunA17_Chr2g0323291 | 95.595 | 227 | 6 | 2 | 52 | 277 | 1 | 224 | 1.30e-158 | 440 |
Msa0261250 | MtrunA17_Chr8g0361111 | 58.079 | 229 | 81 | 4 | 57 | 271 | 23 | 250 | 1.35e-75 | 231 |
Msa0261250 | MtrunA17_Chr2g0318741 | 41.333 | 150 | 64 | 4 | 55 | 204 | 16 | 141 | 2.67e-31 | 114 |
Msa0261250 | MtrunA17_Chr1g0194801 | 32.164 | 171 | 89 | 7 | 76 | 237 | 6 | 158 | 1.39e-20 | 85.9 |
Msa0261250 | MtrunA17_Chr1g0192651 | 30.000 | 170 | 102 | 5 | 76 | 243 | 9 | 163 | 1.51e-19 | 83.6 |
Msa0261250 | MtrunA17_Chr5g0427291 | 35.028 | 177 | 92 | 8 | 72 | 235 | 4 | 170 | 1.07e-18 | 81.6 |
Msa0261250 | MtrunA17_Chr1g0176321 | 30.387 | 181 | 96 | 6 | 77 | 239 | 4 | 172 | 4.83e-17 | 77.0 |
Msa0261250 | MtrunA17_Chr2g0294421 | 29.697 | 165 | 105 | 3 | 73 | 235 | 2 | 157 | 2.28e-16 | 74.7 |
Msa0261250 | MtrunA17_Chr1g0176311 | 30.857 | 175 | 97 | 5 | 77 | 239 | 23 | 185 | 2.84e-16 | 75.1 |
Msa0261250 | MtrunA17_Chr1g0195661 | 29.630 | 162 | 98 | 3 | 80 | 238 | 16 | 164 | 1.49e-15 | 72.8 |
Msa0261250 | MtrunA17_Chr4g0032261 | 30.120 | 166 | 103 | 4 | 73 | 235 | 2 | 157 | 6.65e-15 | 70.9 |
Msa0261250 | MtrunA17_Chr7g0240701 | 27.160 | 162 | 107 | 3 | 76 | 235 | 5 | 157 | 1.64e-13 | 67.0 |
Msa0261250 | MtrunA17_Chr4g0008801 | 25.000 | 168 | 103 | 4 | 76 | 235 | 5 | 157 | 8.32e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0261250 | AT1G11360.2 | 59.259 | 243 | 77 | 7 | 44 | 276 | 12 | 242 | 2.49e-90 | 268 |
Msa0261250 | AT1G11360.1 | 59.259 | 243 | 77 | 7 | 44 | 276 | 12 | 242 | 2.49e-90 | 268 |
Msa0261250 | AT1G11360.4 | 59.259 | 243 | 77 | 7 | 44 | 276 | 12 | 242 | 2.49e-90 | 268 |
Msa0261250 | AT1G11360.3 | 59.259 | 243 | 77 | 7 | 44 | 276 | 12 | 242 | 2.49e-90 | 268 |
Msa0261250 | AT5G54430.2 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 5.03e-66 | 206 |
Msa0261250 | AT5G54430.5 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 5.03e-66 | 206 |
Msa0261250 | AT5G54430.1 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 5.26e-66 | 206 |
Msa0261250 | AT5G54430.4 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 5.26e-66 | 206 |
Msa0261250 | AT5G54430.3 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 9.40e-66 | 206 |
Msa0261250 | AT5G54430.6 | 67.836 | 171 | 49 | 3 | 73 | 242 | 45 | 210 | 9.40e-66 | 206 |
Msa0261250 | AT4G27320.2 | 64.912 | 171 | 60 | 0 | 72 | 242 | 41 | 211 | 9.97e-65 | 204 |
Msa0261250 | AT4G27320.1 | 64.912 | 171 | 60 | 0 | 72 | 242 | 41 | 211 | 1.06e-64 | 203 |
Msa0261250 | AT3G21210.1 | 46.766 | 201 | 64 | 7 | 58 | 255 | 2 | 162 | 5.75e-34 | 130 |
Msa0261250 | AT3G58450.1 | 34.286 | 175 | 90 | 6 | 78 | 240 | 32 | 193 | 3.35e-19 | 84.0 |
Msa0261250 | AT1G09740.2 | 34.270 | 178 | 100 | 6 | 72 | 242 | 4 | 171 | 5.27e-18 | 79.7 |
Msa0261250 | AT1G09740.1 | 34.270 | 178 | 100 | 6 | 72 | 242 | 4 | 171 | 5.27e-18 | 79.7 |
Msa0261250 | AT3G58450.2 | 33.143 | 175 | 85 | 6 | 78 | 240 | 32 | 186 | 7.42e-18 | 80.1 |
Msa0261250 | AT3G03270.2 | 33.728 | 169 | 93 | 4 | 73 | 235 | 2 | 157 | 1.10e-17 | 78.6 |
Msa0261250 | AT3G11930.1 | 27.411 | 197 | 117 | 7 | 56 | 239 | 13 | 196 | 1.82e-17 | 79.0 |
Msa0261250 | AT3G11930.4 | 26.667 | 195 | 123 | 5 | 56 | 239 | 13 | 198 | 4.77e-17 | 78.2 |
Msa0261250 | AT3G11930.2 | 28.283 | 198 | 115 | 8 | 56 | 239 | 13 | 197 | 6.34e-17 | 77.8 |
Msa0261250 | AT3G17020.1 | 28.834 | 163 | 104 | 3 | 76 | 235 | 7 | 160 | 7.68e-17 | 76.6 |
Msa0261250 | AT3G53990.1 | 29.697 | 165 | 99 | 5 | 76 | 235 | 5 | 157 | 2.42e-14 | 69.7 |
Msa0261250 | AT3G62550.1 | 32.143 | 168 | 90 | 6 | 75 | 235 | 6 | 156 | 3.12e-14 | 69.3 |
Msa0261250 | AT3G11930.3 | 25.792 | 221 | 117 | 8 | 56 | 239 | 13 | 223 | 1.20e-13 | 68.9 |
Msa0261250 | AT2G47710.1 | 26.667 | 165 | 98 | 5 | 80 | 238 | 12 | 159 | 7.95e-12 | 62.8 |
Msa0261250 | AT3G03270.1 | 31.944 | 144 | 82 | 3 | 73 | 210 | 2 | 135 | 1.99e-11 | 62.4 |
Msa0261250 | AT1G68300.1 | 28.743 | 167 | 93 | 7 | 76 | 235 | 10 | 157 | 4.52e-11 | 60.5 |
Find 89 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAATCTTTCTTTCTTTCT+TGG | 0.165673 | 2_2:+59534417 | None:intergenic |
GTCTTGATGTTGTTGAATTT+TGG | 0.195981 | 2_2:+59534439 | None:intergenic |
TGGATTGAGTGCTGTGATTA+TGG | 0.202284 | 2_2:-59533877 | Msa0261250:CDS |
ACCGTCGGCGGTGGCGGCGG+TGG | 0.208659 | 2_2:+59534073 | None:intergenic |
CGTCGGCGGTGGCGGCGGTG+GGG | 0.235216 | 2_2:+59534075 | None:intergenic |
GTCGGCGGTGGCGGCGGTGG+GGG | 0.286804 | 2_2:+59534076 | None:intergenic |
CCGTCGGCGGTGGCGGCGGT+GGG | 0.293253 | 2_2:+59534074 | None:intergenic |
CGTTCTCTACGGCGCCGATT+GGG | 0.323896 | 2_2:-59534111 | Msa0261250:CDS |
CCGTTCTCTACGGCGCCGAT+TGG | 0.330764 | 2_2:-59534112 | Msa0261250:CDS |
TCATGTTCTTCCTCAATAAC+AGG | 0.333897 | 2_2:+59533681 | None:intergenic |
TCGAGCCGGGTGATCCGGTT+CGG | 0.366540 | 2_2:+59534277 | None:intergenic |
TTTGTCCTGTTGTTGTTGTA+AGG | 0.379033 | 2_2:-59533773 | Msa0261250:CDS |
ATCGCCACCGTCGGCGGTGG+CGG | 0.381717 | 2_2:+59534067 | None:intergenic |
GGATTGAGTGCTGTGATTAT+GGG | 0.392819 | 2_2:-59533876 | Msa0261250:CDS |
GCCACCGTCGGCGGTGGCGG+CGG | 0.401210 | 2_2:+59534070 | None:intergenic |
ATTCATGTTGGAGAAAATTA+CGG | 0.409949 | 2_2:+59534319 | None:intergenic |
TATGAAGGAAAGATTGTGTT+TGG | 0.411316 | 2_2:-59533913 | Msa0261250:CDS |
TTCACAATGTGAATCTTAAA+CGG | 0.413061 | 2_2:+59533945 | None:intergenic |
GGCGGTGGCGCCGGAGTTGA+AGG | 0.418319 | 2_2:-59533732 | Msa0261250:CDS |
GAGAATCGAGCCGGGTGATC+CGG | 0.418386 | 2_2:+59534272 | None:intergenic |
CGAGCCGGGTGATCCGGTTC+GGG | 0.434205 | 2_2:+59534278 | None:intergenic |
AGTATTAATCTGCGCAACTT+TGG | 0.436069 | 2_2:-59534359 | Msa0261250:CDS |
ACCATCATTCCCTTCAACTC+CGG | 0.437183 | 2_2:+59533722 | None:intergenic |
CCCACCGCCGCCACCGCCGA+CGG | 0.446499 | 2_2:-59534074 | Msa0261250:CDS |
GGAGGGGACGGAACCCCAAT+CGG | 0.448915 | 2_2:+59534097 | None:intergenic |
TGCGACTTTGCGGTGTGAAC+CGG | 0.449024 | 2_2:+59534241 | None:intergenic |
ACCGCCGCCACCGCCGACGG+TGG | 0.455733 | 2_2:-59534071 | Msa0261250:CDS |
GCGACGAAGAGAAGTTCTAA+TGG | 0.460127 | 2_2:-59533837 | Msa0261250:CDS |
TGTTGTTGTTGTAAGGTATC+CGG | 0.464214 | 2_2:-59533766 | Msa0261250:CDS |
CACCAATGGTTGTGCAAGAT+CGG | 0.464706 | 2_2:+59533980 | None:intergenic |
GAGAGTGATGGCGGTGGCGC+CGG | 0.471955 | 2_2:-59533741 | Msa0261250:CDS |
GGATACCTTACAACAACAAC+AGG | 0.473220 | 2_2:+59533768 | None:intergenic |
AGAAGTTCTAATGGGAAGCT+TGG | 0.473262 | 2_2:-59533828 | Msa0261250:CDS |
ATCACCGGTTCGGCCCGAAC+CGG | 0.473685 | 2_2:-59534291 | Msa0261250:CDS |
TGATCCGGTTCGGGCCGAAC+CGG | 0.474957 | 2_2:+59534287 | None:intergenic |
GGCATCGCCACCGTCGGCGG+TGG | 0.483223 | 2_2:+59534064 | None:intergenic |
GTAACGGATCAAAGAGTTTG+AGG | 0.483366 | 2_2:+59534396 | None:intergenic |
TGAACTTCATCCTGTTATTG+AGG | 0.483983 | 2_2:-59533691 | Msa0261250:CDS |
CAACGGCGATTGCGACTTTG+CGG | 0.486543 | 2_2:+59534231 | None:intergenic |
ATTATGGGAAGCCGTGGATT+CGG | 0.487024 | 2_2:-59533861 | Msa0261250:CDS |
TGTGAAAGATCATGATATGA+AGG | 0.493312 | 2_2:-59533928 | Msa0261250:CDS |
AGGAGGATGACGGTGTCGCC+TGG | 0.496895 | 2_2:+59534152 | None:intergenic |
CGACGAAGAGAAGTTCTAAT+GGG | 0.501552 | 2_2:-59533836 | Msa0261250:CDS |
CGATCTTGCACAACCATTGG+TGG | 0.502670 | 2_2:-59533979 | Msa0261250:CDS |
AAAGCGCCTACGCCGTCCGA+TGG | 0.507961 | 2_2:-59534196 | Msa0261250:CDS |
TCGGGCCGAACCGGTGATTG+TGG | 0.519250 | 2_2:+59534296 | None:intergenic |
GCTCGATTCTCTCTCCCATC+CGG | 0.521090 | 2_2:-59534260 | Msa0261250:CDS |
AACCGATCTTGCACAACCAT+TGG | 0.523574 | 2_2:-59533982 | Msa0261250:CDS |
TGAATCCACAATCACCGGTT+CGG | 0.526182 | 2_2:-59534301 | Msa0261250:CDS |
GGAGTTTCTGATTCCACCAA+TGG | 0.528495 | 2_2:+59533966 | None:intergenic |
GCGCCGTAGAGAACGGAAGT+TGG | 0.529716 | 2_2:+59534119 | None:intergenic |
AAGTTGGACGGACGTGGAGG+AGG | 0.532912 | 2_2:+59534135 | None:intergenic |
GATTGTGTTTGGAAGTTGAA+CGG | 0.542960 | 2_2:-59533902 | Msa0261250:CDS |
CTCGGAGGCATCGCCACCGT+CGG | 0.543219 | 2_2:+59534058 | None:intergenic |
TCGGCCCGAACCGGATCACC+CGG | 0.544498 | 2_2:-59534282 | Msa0261250:CDS |
GTTCTCTACGGCGCCGATTG+GGG | 0.546679 | 2_2:-59534110 | Msa0261250:CDS |
CCACCGCCATCACTCTCCTC+CGG | 0.553044 | 2_2:+59533747 | None:intergenic |
CGTCCAACTTCCGTTCTCTA+CGG | 0.556201 | 2_2:-59534122 | Msa0261250:CDS |
GAACGGAAGTTGGACGGACG+TGG | 0.556761 | 2_2:+59534129 | None:intergenic |
AAGCGCCTACGCCGTCCGAT+GGG | 0.559124 | 2_2:-59534195 | Msa0261250:CDS |
CTTGGAGTTTGATTCAGTAA+CGG | 0.559749 | 2_2:+59534380 | None:intergenic |
AAGTTGCGCAGATTAATACT+TGG | 0.563471 | 2_2:+59534362 | None:intergenic |
CCAATCGGCGCCGTAGAGAA+CGG | 0.564627 | 2_2:+59534112 | None:intergenic |
CAACATGAATCCACAATCAC+CGG | 0.570327 | 2_2:-59534306 | Msa0261250:CDS |
GATGGGAGAGAGAATCGAGC+CGG | 0.579454 | 2_2:+59534263 | None:intergenic |
ATGGGAGAGAGAATCGAGCC+GGG | 0.583700 | 2_2:+59534264 | None:intergenic |
CTTTGCGGTGTGAACCGGAT+GGG | 0.583999 | 2_2:+59534246 | None:intergenic |
TCTTCGTCGCACCGAATCCA+CGG | 0.588772 | 2_2:+59533850 | None:intergenic |
AACTGCCCATCGGACGGCGT+AGG | 0.589727 | 2_2:+59534190 | None:intergenic |
CGTAGAGAACGGAAGTTGGA+CGG | 0.593295 | 2_2:+59534123 | None:intergenic |
GGAGGCATCGCCACCGTCGG+CGG | 0.602626 | 2_2:+59534061 | None:intergenic |
CGGTGATTGTGGATTCATGT+TGG | 0.604905 | 2_2:+59534307 | None:intergenic |
TGTTTGGAAGTTGAACGGCT+TGG | 0.605669 | 2_2:-59533897 | Msa0261250:CDS |
GGATGACGGTGTCGCCTGGT+CGG | 0.607279 | 2_2:+59534156 | None:intergenic |
TATTGAGGAAGAACATGAAG+AGG | 0.612634 | 2_2:-59533676 | Msa0261250:CDS |
CCGGAGGAGAGTGATGGCGG+TGG | 0.619622 | 2_2:-59533747 | Msa0261250:CDS |
ACTTTGCGGTGTGAACCGGA+TGG | 0.620134 | 2_2:+59534245 | None:intergenic |
GCTTTCGTCGCTGAGATCAA+CGG | 0.620909 | 2_2:+59534214 | None:intergenic |
AGGTATCCGGAGGAGAGTGA+TGG | 0.623434 | 2_2:-59533753 | Msa0261250:CDS |
GTTCAAAATTATCTCCGACC+AGG | 0.624222 | 2_2:-59534170 | Msa0261250:CDS |
GCCGGAGTTGAAGGGAATGA+TGG | 0.624545 | 2_2:-59533723 | Msa0261250:CDS |
CGACGGTGGCGATGCCTCCG+AGG | 0.636822 | 2_2:-59534057 | Msa0261250:CDS |
GCGGTGGCGCCGGAGTTGAA+GGG | 0.640757 | 2_2:-59533731 | Msa0261250:CDS |
TATCCGGAGGAGAGTGATGG+CGG | 0.657096 | 2_2:-59533750 | Msa0261250:CDS |
TGTTGTTGTAAGGTATCCGG+AGG | 0.667970 | 2_2:-59533763 | Msa0261250:CDS |
CGGAAGTTGGACGGACGTGG+AGG | 0.669422 | 2_2:+59534132 | None:intergenic |
ACGGACGTGGAGGAGGATGA+CGG | 0.677052 | 2_2:+59534142 | None:intergenic |
GCTGTGATTATGGGAAGCCG+TGG | 0.685112 | 2_2:-59533867 | Msa0261250:CDS |
GATGCTGATGATGAACACAA+AGG | 0.760715 | 2_2:-59533645 | Msa0261250:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTGAATTTTGGTATTCTTT+CGG | + | chr2_2:59533640-59533659 | None:intergenic | 25.0% |
! | ATTCATGTTGGAGAAAATTA+CGG | + | chr2_2:59533771-59533790 | None:intergenic | 25.0% |
! | TTCACAATGTGAATCTTAAA+CGG | + | chr2_2:59534145-59534164 | None:intergenic | 25.0% |
!!! | GTTGAATTTTGGTATTCTTT+CGG | + | chr2_2:59533640-59533659 | None:intergenic | 25.0% |
! | ATTCATGTTGGAGAAAATTA+CGG | + | chr2_2:59533771-59533790 | None:intergenic | 25.0% |
! | TTCACAATGTGAATCTTAAA+CGG | + | chr2_2:59534145-59534164 | None:intergenic | 25.0% |
! | GTCTTGATGTTGTTGAATTT+TGG | + | chr2_2:59533651-59533670 | None:intergenic | 30.0% |
GGAAATCTTTCTTTCTTTCT+TGG | + | chr2_2:59533673-59533692 | None:intergenic | 30.0% | |
!!! | TGGAGAAAATTACGGTTTTT+TGG | + | chr2_2:59533763-59533782 | None:intergenic | 30.0% |
TGTGAAAGATCATGATATGA+AGG | - | chr2_2:59534159-59534178 | Msa0261250:CDS | 30.0% | |
TATGAAGGAAAGATTGTGTT+TGG | - | chr2_2:59534174-59534193 | Msa0261250:CDS | 30.0% | |
! | GTCTTGATGTTGTTGAATTT+TGG | + | chr2_2:59533651-59533670 | None:intergenic | 30.0% |
GGAAATCTTTCTTTCTTTCT+TGG | + | chr2_2:59533673-59533692 | None:intergenic | 30.0% | |
!!! | TGGAGAAAATTACGGTTTTT+TGG | + | chr2_2:59533763-59533782 | None:intergenic | 30.0% |
TGTGAAAGATCATGATATGA+AGG | - | chr2_2:59534159-59534178 | Msa0261250:CDS | 30.0% | |
TATGAAGGAAAGATTGTGTT+TGG | - | chr2_2:59534174-59534193 | Msa0261250:CDS | 30.0% | |
CTTGGAGTTTGATTCAGTAA+CGG | + | chr2_2:59533710-59533729 | None:intergenic | 35.0% | |
AAGTTGCGCAGATTAATACT+TGG | + | chr2_2:59533728-59533747 | None:intergenic | 35.0% | |
AGTATTAATCTGCGCAACTT+TGG | - | chr2_2:59533728-59533747 | Msa0261250:CDS | 35.0% | |
! | GATAATTTTGAACTGCCCAT+CGG | + | chr2_2:59533910-59533929 | None:intergenic | 35.0% |
!!! | CATTTTTTGACGTGATTCCT+CGG | + | chr2_2:59534050-59534069 | None:intergenic | 35.0% |
GATTGTGTTTGGAAGTTGAA+CGG | - | chr2_2:59534185-59534204 | Msa0261250:CDS | 35.0% | |
! | TTTGTCCTGTTGTTGTTGTA+AGG | - | chr2_2:59534314-59534333 | Msa0261250:CDS | 35.0% |
! | TGTTGTTGTTGTAAGGTATC+CGG | - | chr2_2:59534321-59534340 | Msa0261250:CDS | 35.0% |
TGAACTTCATCCTGTTATTG+AGG | - | chr2_2:59534396-59534415 | Msa0261250:CDS | 35.0% | |
TCATGTTCTTCCTCAATAAC+AGG | + | chr2_2:59534409-59534428 | None:intergenic | 35.0% | |
TATTGAGGAAGAACATGAAG+AGG | - | chr2_2:59534411-59534430 | Msa0261250:CDS | 35.0% | |
CTTGGAGTTTGATTCAGTAA+CGG | + | chr2_2:59533710-59533729 | None:intergenic | 35.0% | |
AAGTTGCGCAGATTAATACT+TGG | + | chr2_2:59533728-59533747 | None:intergenic | 35.0% | |
AGTATTAATCTGCGCAACTT+TGG | - | chr2_2:59533728-59533747 | Msa0261250:CDS | 35.0% | |
! | GATAATTTTGAACTGCCCAT+CGG | + | chr2_2:59533910-59533929 | None:intergenic | 35.0% |
!!! | CATTTTTTGACGTGATTCCT+CGG | + | chr2_2:59534050-59534069 | None:intergenic | 35.0% |
GATTGTGTTTGGAAGTTGAA+CGG | - | chr2_2:59534185-59534204 | Msa0261250:CDS | 35.0% | |
! | TTTGTCCTGTTGTTGTTGTA+AGG | - | chr2_2:59534314-59534333 | Msa0261250:CDS | 35.0% |
! | TGTTGTTGTTGTAAGGTATC+CGG | - | chr2_2:59534321-59534340 | Msa0261250:CDS | 35.0% |
TGAACTTCATCCTGTTATTG+AGG | - | chr2_2:59534396-59534415 | Msa0261250:CDS | 35.0% | |
TCATGTTCTTCCTCAATAAC+AGG | + | chr2_2:59534409-59534428 | None:intergenic | 35.0% | |
TATTGAGGAAGAACATGAAG+AGG | - | chr2_2:59534411-59534430 | Msa0261250:CDS | 35.0% | |
!! | GTAACGGATCAAAGAGTTTG+AGG | + | chr2_2:59533694-59533713 | None:intergenic | 40.0% |
CAACATGAATCCACAATCAC+CGG | - | chr2_2:59533781-59533800 | Msa0261250:CDS | 40.0% | |
GTTCAAAATTATCTCCGACC+AGG | - | chr2_2:59533917-59533936 | Msa0261250:CDS | 40.0% | |
CGAGGAATCACGTCAAAAAA+TGG | - | chr2_2:59534048-59534067 | Msa0261250:CDS | 40.0% | |
!!! | AAGATCGGTTGCTTTTGTTG+AGG | + | chr2_2:59534095-59534114 | None:intergenic | 40.0% |
! | TGGATTGAGTGCTGTGATTA+TGG | - | chr2_2:59534210-59534229 | Msa0261250:CDS | 40.0% |
! | GGATTGAGTGCTGTGATTAT+GGG | - | chr2_2:59534211-59534230 | Msa0261250:CDS | 40.0% |
! | CGACGAAGAGAAGTTCTAAT+GGG | - | chr2_2:59534251-59534270 | Msa0261250:CDS | 40.0% |
! | AGAAGTTCTAATGGGAAGCT+TGG | - | chr2_2:59534259-59534278 | Msa0261250:CDS | 40.0% |
GGATACCTTACAACAACAAC+AGG | + | chr2_2:59534322-59534341 | None:intergenic | 40.0% | |
! | GATGCTGATGATGAACACAA+AGG | - | chr2_2:59534442-59534461 | Msa0261250:CDS | 40.0% |
!! | GTAACGGATCAAAGAGTTTG+AGG | + | chr2_2:59533694-59533713 | None:intergenic | 40.0% |
CAACATGAATCCACAATCAC+CGG | - | chr2_2:59533781-59533800 | Msa0261250:CDS | 40.0% | |
GTTCAAAATTATCTCCGACC+AGG | - | chr2_2:59533917-59533936 | Msa0261250:CDS | 40.0% | |
CGAGGAATCACGTCAAAAAA+TGG | - | chr2_2:59534048-59534067 | Msa0261250:CDS | 40.0% | |
!!! | AAGATCGGTTGCTTTTGTTG+AGG | + | chr2_2:59534095-59534114 | None:intergenic | 40.0% |
! | TGGATTGAGTGCTGTGATTA+TGG | - | chr2_2:59534210-59534229 | Msa0261250:CDS | 40.0% |
! | GGATTGAGTGCTGTGATTAT+GGG | - | chr2_2:59534211-59534230 | Msa0261250:CDS | 40.0% |
! | CGACGAAGAGAAGTTCTAAT+GGG | - | chr2_2:59534251-59534270 | Msa0261250:CDS | 40.0% |
! | AGAAGTTCTAATGGGAAGCT+TGG | - | chr2_2:59534259-59534278 | Msa0261250:CDS | 40.0% |
GGATACCTTACAACAACAAC+AGG | + | chr2_2:59534322-59534341 | None:intergenic | 40.0% | |
! | GATGCTGATGATGAACACAA+AGG | - | chr2_2:59534442-59534461 | Msa0261250:CDS | 40.0% |
CGGTGATTGTGGATTCATGT+TGG | + | chr2_2:59533783-59533802 | None:intergenic | 45.0% | |
! | TGAATCCACAATCACCGGTT+CGG | - | chr2_2:59533786-59533805 | Msa0261250:CDS | 45.0% |
! | ATTTTGAACTGCCCATCGGA+CGG | + | chr2_2:59533906-59533925 | None:intergenic | 45.0% |
! | TTTTTGACGTGATTCCTCGG+AGG | + | chr2_2:59534047-59534066 | None:intergenic | 45.0% |
AACCGATCTTGCACAACCAT+TGG | - | chr2_2:59534105-59534124 | Msa0261250:CDS | 45.0% | |
CACCAATGGTTGTGCAAGAT+CGG | + | chr2_2:59534110-59534129 | None:intergenic | 45.0% | |
GGAGTTTCTGATTCCACCAA+TGG | + | chr2_2:59534124-59534143 | None:intergenic | 45.0% | |
TGTTTGGAAGTTGAACGGCT+TGG | - | chr2_2:59534190-59534209 | Msa0261250:CDS | 45.0% | |
ATTATGGGAAGCCGTGGATT+CGG | - | chr2_2:59534226-59534245 | Msa0261250:CDS | 45.0% | |
! | GCGACGAAGAGAAGTTCTAA+TGG | - | chr2_2:59534250-59534269 | Msa0261250:CDS | 45.0% |
! | TGTTGTTGTAAGGTATCCGG+AGG | - | chr2_2:59534324-59534343 | Msa0261250:CDS | 45.0% |
ACCATCATTCCCTTCAACTC+CGG | + | chr2_2:59534368-59534387 | None:intergenic | 45.0% | |
CGGTGATTGTGGATTCATGT+TGG | + | chr2_2:59533783-59533802 | None:intergenic | 45.0% | |
! | TGAATCCACAATCACCGGTT+CGG | - | chr2_2:59533786-59533805 | Msa0261250:CDS | 45.0% |
! | ATTTTGAACTGCCCATCGGA+CGG | + | chr2_2:59533906-59533925 | None:intergenic | 45.0% |
! | TTTTTGACGTGATTCCTCGG+AGG | + | chr2_2:59534047-59534066 | None:intergenic | 45.0% |
AACCGATCTTGCACAACCAT+TGG | - | chr2_2:59534105-59534124 | Msa0261250:CDS | 45.0% | |
CACCAATGGTTGTGCAAGAT+CGG | + | chr2_2:59534110-59534129 | None:intergenic | 45.0% | |
GGAGTTTCTGATTCCACCAA+TGG | + | chr2_2:59534124-59534143 | None:intergenic | 45.0% | |
TGTTTGGAAGTTGAACGGCT+TGG | - | chr2_2:59534190-59534209 | Msa0261250:CDS | 45.0% | |
ATTATGGGAAGCCGTGGATT+CGG | - | chr2_2:59534226-59534245 | Msa0261250:CDS | 45.0% | |
! | GCGACGAAGAGAAGTTCTAA+TGG | - | chr2_2:59534250-59534269 | Msa0261250:CDS | 45.0% |
! | TGTTGTTGTAAGGTATCCGG+AGG | - | chr2_2:59534324-59534343 | Msa0261250:CDS | 45.0% |
ACCATCATTCCCTTCAACTC+CGG | + | chr2_2:59534368-59534387 | None:intergenic | 45.0% | |
GCTTTCGTCGCTGAGATCAA+CGG | + | chr2_2:59533876-59533895 | None:intergenic | 50.0% | |
CGTAGAGAACGGAAGTTGGA+CGG | + | chr2_2:59533967-59533986 | None:intergenic | 50.0% | |
CGTCCAACTTCCGTTCTCTA+CGG | - | chr2_2:59533965-59533984 | Msa0261250:CDS | 50.0% | |
CGATCTTGCACAACCATTGG+TGG | - | chr2_2:59534108-59534127 | Msa0261250:CDS | 50.0% | |
GCTTTCGTCGCTGAGATCAA+CGG | + | chr2_2:59533876-59533895 | None:intergenic | 50.0% | |
CGTAGAGAACGGAAGTTGGA+CGG | + | chr2_2:59533967-59533986 | None:intergenic | 50.0% | |
CGTCCAACTTCCGTTCTCTA+CGG | - | chr2_2:59533965-59533984 | Msa0261250:CDS | 50.0% | |
CGATCTTGCACAACCATTGG+TGG | - | chr2_2:59534108-59534127 | Msa0261250:CDS | 50.0% | |
ATGGGAGAGAGAATCGAGCC+GGG | + | chr2_2:59533826-59533845 | None:intergenic | 55.0% | |
GATGGGAGAGAGAATCGAGC+CGG | + | chr2_2:59533827-59533846 | None:intergenic | 55.0% | |
GCTCGATTCTCTCTCCCATC+CGG | - | chr2_2:59533827-59533846 | Msa0261250:CDS | 55.0% | |
CTTTGCGGTGTGAACCGGAT+GGG | + | chr2_2:59533844-59533863 | None:intergenic | 55.0% | |
ACTTTGCGGTGTGAACCGGA+TGG | + | chr2_2:59533845-59533864 | None:intergenic | 55.0% | |
TGCGACTTTGCGGTGTGAAC+CGG | + | chr2_2:59533849-59533868 | None:intergenic | 55.0% | |
CAACGGCGATTGCGACTTTG+CGG | + | chr2_2:59533859-59533878 | None:intergenic | 55.0% | |
GCTGTGATTATGGGAAGCCG+TGG | - | chr2_2:59534220-59534239 | Msa0261250:CDS | 55.0% | |
TCTTCGTCGCACCGAATCCA+CGG | + | chr2_2:59534240-59534259 | None:intergenic | 55.0% | |
AGGTATCCGGAGGAGAGTGA+TGG | - | chr2_2:59534334-59534353 | Msa0261250:CDS | 55.0% | |
TATCCGGAGGAGAGTGATGG+CGG | - | chr2_2:59534337-59534356 | Msa0261250:CDS | 55.0% | |
GCCGGAGTTGAAGGGAATGA+TGG | - | chr2_2:59534364-59534383 | Msa0261250:CDS | 55.0% | |
ATGGGAGAGAGAATCGAGCC+GGG | + | chr2_2:59533826-59533845 | None:intergenic | 55.0% | |
GATGGGAGAGAGAATCGAGC+CGG | + | chr2_2:59533827-59533846 | None:intergenic | 55.0% | |
GCTCGATTCTCTCTCCCATC+CGG | - | chr2_2:59533827-59533846 | Msa0261250:CDS | 55.0% | |
CTTTGCGGTGTGAACCGGAT+GGG | + | chr2_2:59533844-59533863 | None:intergenic | 55.0% | |
ACTTTGCGGTGTGAACCGGA+TGG | + | chr2_2:59533845-59533864 | None:intergenic | 55.0% | |
TGCGACTTTGCGGTGTGAAC+CGG | + | chr2_2:59533849-59533868 | None:intergenic | 55.0% | |
CAACGGCGATTGCGACTTTG+CGG | + | chr2_2:59533859-59533878 | None:intergenic | 55.0% | |
GCTGTGATTATGGGAAGCCG+TGG | - | chr2_2:59534220-59534239 | Msa0261250:CDS | 55.0% | |
TCTTCGTCGCACCGAATCCA+CGG | + | chr2_2:59534240-59534259 | None:intergenic | 55.0% | |
AGGTATCCGGAGGAGAGTGA+TGG | - | chr2_2:59534334-59534353 | Msa0261250:CDS | 55.0% | |
TATCCGGAGGAGAGTGATGG+CGG | - | chr2_2:59534337-59534356 | Msa0261250:CDS | 55.0% | |
GCCGGAGTTGAAGGGAATGA+TGG | - | chr2_2:59534364-59534383 | Msa0261250:CDS | 55.0% | |
GAGAATCGAGCCGGGTGATC+CGG | + | chr2_2:59533818-59533837 | None:intergenic | 60.0% | |
ACGGACGTGGAGGAGGATGA+CGG | + | chr2_2:59533948-59533967 | None:intergenic | 60.0% | |
AAGTTGGACGGACGTGGAGG+AGG | + | chr2_2:59533955-59533974 | None:intergenic | 60.0% | |
GAACGGAAGTTGGACGGACG+TGG | + | chr2_2:59533961-59533980 | None:intergenic | 60.0% | |
GCGCCGTAGAGAACGGAAGT+TGG | + | chr2_2:59533971-59533990 | None:intergenic | 60.0% | |
CCAATCGGCGCCGTAGAGAA+CGG | + | chr2_2:59533978-59533997 | None:intergenic | 60.0% | |
!! | CGTTCTCTACGGCGCCGATT+GGG | - | chr2_2:59533976-59533995 | Msa0261250:CDS | 60.0% |
!! | GTTCTCTACGGCGCCGATTG+GGG | - | chr2_2:59533977-59533996 | Msa0261250:CDS | 60.0% |
GAGAATCGAGCCGGGTGATC+CGG | + | chr2_2:59533818-59533837 | None:intergenic | 60.0% | |
ACGGACGTGGAGGAGGATGA+CGG | + | chr2_2:59533948-59533967 | None:intergenic | 60.0% | |
AAGTTGGACGGACGTGGAGG+AGG | + | chr2_2:59533955-59533974 | None:intergenic | 60.0% | |
GAACGGAAGTTGGACGGACG+TGG | + | chr2_2:59533961-59533980 | None:intergenic | 60.0% | |
GCGCCGTAGAGAACGGAAGT+TGG | + | chr2_2:59533971-59533990 | None:intergenic | 60.0% | |
CCAATCGGCGCCGTAGAGAA+CGG | + | chr2_2:59533978-59533997 | None:intergenic | 60.0% | |
!! | CGTTCTCTACGGCGCCGATT+GGG | - | chr2_2:59533976-59533995 | Msa0261250:CDS | 60.0% |
!! | GTTCTCTACGGCGCCGATTG+GGG | - | chr2_2:59533977-59533996 | Msa0261250:CDS | 60.0% |
TCGGGCCGAACCGGTGATTG+TGG | + | chr2_2:59533794-59533813 | None:intergenic | 65.0% | |
!! | ATCACCGGTTCGGCCCGAAC+CGG | - | chr2_2:59533796-59533815 | Msa0261250:CDS | 65.0% |
!! | TGATCCGGTTCGGGCCGAAC+CGG | + | chr2_2:59533803-59533822 | None:intergenic | 65.0% |
TCGAGCCGGGTGATCCGGTT+CGG | + | chr2_2:59533813-59533832 | None:intergenic | 65.0% | |
! | AAAGCGCCTACGCCGTCCGA+TGG | - | chr2_2:59533891-59533910 | Msa0261250:CDS | 65.0% |
AAGCGCCTACGCCGTCCGAT+GGG | - | chr2_2:59533892-59533911 | Msa0261250:CDS | 65.0% | |
AACTGCCCATCGGACGGCGT+AGG | + | chr2_2:59533900-59533919 | None:intergenic | 65.0% | |
!! | GGATGACGGTGTCGCCTGGT+CGG | + | chr2_2:59533934-59533953 | None:intergenic | 65.0% |
!! | AGGAGGATGACGGTGTCGCC+TGG | + | chr2_2:59533938-59533957 | None:intergenic | 65.0% |
CGGAAGTTGGACGGACGTGG+AGG | + | chr2_2:59533958-59533977 | None:intergenic | 65.0% | |
!! | CCGTTCTCTACGGCGCCGAT+TGG | - | chr2_2:59533975-59533994 | Msa0261250:CDS | 65.0% |
GGAGGGGACGGAACCCCAAT+CGG | + | chr2_2:59533993-59534012 | None:intergenic | 65.0% | |
CCACCGCCATCACTCTCCTC+CGG | + | chr2_2:59534343-59534362 | None:intergenic | 65.0% | |
TCGGGCCGAACCGGTGATTG+TGG | + | chr2_2:59533794-59533813 | None:intergenic | 65.0% | |
!! | ATCACCGGTTCGGCCCGAAC+CGG | - | chr2_2:59533796-59533815 | Msa0261250:CDS | 65.0% |
!! | TGATCCGGTTCGGGCCGAAC+CGG | + | chr2_2:59533803-59533822 | None:intergenic | 65.0% |
TCGAGCCGGGTGATCCGGTT+CGG | + | chr2_2:59533813-59533832 | None:intergenic | 65.0% | |
! | AAAGCGCCTACGCCGTCCGA+TGG | - | chr2_2:59533891-59533910 | Msa0261250:CDS | 65.0% |
AAGCGCCTACGCCGTCCGAT+GGG | - | chr2_2:59533892-59533911 | Msa0261250:CDS | 65.0% | |
AACTGCCCATCGGACGGCGT+AGG | + | chr2_2:59533900-59533919 | None:intergenic | 65.0% | |
!! | GGATGACGGTGTCGCCTGGT+CGG | + | chr2_2:59533934-59533953 | None:intergenic | 65.0% |
!! | AGGAGGATGACGGTGTCGCC+TGG | + | chr2_2:59533938-59533957 | None:intergenic | 65.0% |
CGGAAGTTGGACGGACGTGG+AGG | + | chr2_2:59533958-59533977 | None:intergenic | 65.0% | |
!! | CCGTTCTCTACGGCGCCGAT+TGG | - | chr2_2:59533975-59533994 | Msa0261250:CDS | 65.0% |
GGAGGGGACGGAACCCCAAT+CGG | + | chr2_2:59533993-59534012 | None:intergenic | 65.0% | |
CCACCGCCATCACTCTCCTC+CGG | + | chr2_2:59534343-59534362 | None:intergenic | 65.0% | |
TCGGCCCGAACCGGATCACC+CGG | - | chr2_2:59533805-59533824 | Msa0261250:CDS | 70.0% | |
CGAGCCGGGTGATCCGGTTC+GGG | + | chr2_2:59533812-59533831 | None:intergenic | 70.0% | |
!! | CTCGGAGGCATCGCCACCGT+CGG | + | chr2_2:59534032-59534051 | None:intergenic | 70.0% |
!! | CCGGAGGAGAGTGATGGCGG+TGG | - | chr2_2:59534340-59534359 | Msa0261250:CDS | 70.0% |
!! | GAGAGTGATGGCGGTGGCGC+CGG | - | chr2_2:59534346-59534365 | Msa0261250:CDS | 70.0% |
! | GCGGTGGCGCCGGAGTTGAA+GGG | - | chr2_2:59534356-59534375 | Msa0261250:CDS | 70.0% |
TCGGCCCGAACCGGATCACC+CGG | - | chr2_2:59533805-59533824 | Msa0261250:CDS | 70.0% | |
CGAGCCGGGTGATCCGGTTC+GGG | + | chr2_2:59533812-59533831 | None:intergenic | 70.0% | |
!! | CTCGGAGGCATCGCCACCGT+CGG | + | chr2_2:59534032-59534051 | None:intergenic | 70.0% |
!! | CCGGAGGAGAGTGATGGCGG+TGG | - | chr2_2:59534340-59534359 | Msa0261250:CDS | 70.0% |
!! | GAGAGTGATGGCGGTGGCGC+CGG | - | chr2_2:59534346-59534365 | Msa0261250:CDS | 70.0% |
! | GCGGTGGCGCCGGAGTTGAA+GGG | - | chr2_2:59534356-59534375 | Msa0261250:CDS | 70.0% |
ATCGCCACCGTCGGCGGTGG+CGG | + | chr2_2:59534023-59534042 | None:intergenic | 75.0% | |
!! | GGAGGCATCGCCACCGTCGG+CGG | + | chr2_2:59534029-59534048 | None:intergenic | 75.0% |
CGACGGTGGCGATGCCTCCG+AGG | - | chr2_2:59534030-59534049 | Msa0261250:CDS | 75.0% | |
! | GGCGGTGGCGCCGGAGTTGA+AGG | - | chr2_2:59534355-59534374 | Msa0261250:CDS | 75.0% |
ATCGCCACCGTCGGCGGTGG+CGG | + | chr2_2:59534023-59534042 | None:intergenic | 75.0% | |
!! | GGAGGCATCGCCACCGTCGG+CGG | + | chr2_2:59534029-59534048 | None:intergenic | 75.0% |
CGACGGTGGCGATGCCTCCG+AGG | - | chr2_2:59534030-59534049 | Msa0261250:CDS | 75.0% | |
! | GGCGGTGGCGCCGGAGTTGA+AGG | - | chr2_2:59534355-59534374 | Msa0261250:CDS | 75.0% |
! | GGCATCGCCACCGTCGGCGG+TGG | + | chr2_2:59534026-59534045 | None:intergenic | 80.0% |
! | GGCATCGCCACCGTCGGCGG+TGG | + | chr2_2:59534026-59534045 | None:intergenic | 80.0% |
! | GGCGGCGGTGGGGGAGGGGA+CGG | + | chr2_2:59534005-59534024 | None:intergenic | 85.0% |
!! | CGGTGGCGGCGGTGGGGGAG+GGG | + | chr2_2:59534009-59534028 | None:intergenic | 85.0% |
!! | GCGGTGGCGGCGGTGGGGGA+GGG | + | chr2_2:59534010-59534029 | None:intergenic | 85.0% |
!! | GTCGGCGGTGGCGGCGGTGG+GGG | + | chr2_2:59534014-59534033 | None:intergenic | 85.0% |
!! | CGTCGGCGGTGGCGGCGGTG+GGG | + | chr2_2:59534015-59534034 | None:intergenic | 85.0% |
!! | CCGTCGGCGGTGGCGGCGGT+GGG | + | chr2_2:59534016-59534035 | None:intergenic | 85.0% |
! | CCCACCGCCGCCACCGCCGA+CGG | - | chr2_2:59534013-59534032 | Msa0261250:CDS | 85.0% |
!! | ACCGTCGGCGGTGGCGGCGG+TGG | + | chr2_2:59534017-59534036 | None:intergenic | 85.0% |
! | ACCGCCGCCACCGCCGACGG+TGG | - | chr2_2:59534016-59534035 | Msa0261250:CDS | 85.0% |
!! | GCCACCGTCGGCGGTGGCGG+CGG | + | chr2_2:59534020-59534039 | None:intergenic | 85.0% |
! | GGCGGCGGTGGGGGAGGGGA+CGG | + | chr2_2:59534005-59534024 | None:intergenic | 85.0% |
!! | CGGTGGCGGCGGTGGGGGAG+GGG | + | chr2_2:59534009-59534028 | None:intergenic | 85.0% |
!! | GCGGTGGCGGCGGTGGGGGA+GGG | + | chr2_2:59534010-59534029 | None:intergenic | 85.0% |
!! | GTCGGCGGTGGCGGCGGTGG+GGG | + | chr2_2:59534014-59534033 | None:intergenic | 85.0% |
!! | CGTCGGCGGTGGCGGCGGTG+GGG | + | chr2_2:59534015-59534034 | None:intergenic | 85.0% |
!! | CCGTCGGCGGTGGCGGCGGT+GGG | + | chr2_2:59534016-59534035 | None:intergenic | 85.0% |
! | CCCACCGCCGCCACCGCCGA+CGG | - | chr2_2:59534013-59534032 | Msa0261250:CDS | 85.0% |
!! | ACCGTCGGCGGTGGCGGCGG+TGG | + | chr2_2:59534017-59534036 | None:intergenic | 85.0% |
! | ACCGCCGCCACCGCCGACGG+TGG | - | chr2_2:59534016-59534035 | Msa0261250:CDS | 85.0% |
!! | GCCACCGTCGGCGGTGGCGG+CGG | + | chr2_2:59534020-59534039 | None:intergenic | 85.0% |
!! | GGCGGTGGCGGCGGTGGGGG+AGG | + | chr2_2:59534011-59534030 | None:intergenic | 90.0% |
!! | GGCGGTGGCGGCGGTGGGGG+AGG | + | chr2_2:59534011-59534030 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 59533632 | 59534477 | 59533632 | ID=Msa0261250;Name=Msa0261250 |
chr2_2 | mRNA | 59533632 | 59534477 | 59533632 | ID=Msa0261250-mRNA-1;Parent=Msa0261250;Name=Msa0261250-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|1|1|0|281 |
chr2_2 | exon | 59533632 | 59534477 | 59533632 | ID=Msa0261250-mRNA-1:exon:18360;Parent=Msa0261250-mRNA-1 |
chr2_2 | CDS | 59533632 | 59534477 | 59533632 | ID=Msa0261250-mRNA-1:cds;Parent=Msa0261250-mRNA-1 |
Gene Sequence |
Protein sequence |