Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484250 | RHN54390.1 | 83.501 | 497 | 54 | 5 | 1 | 478 | 1 | 488 | 0.0 | 798 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484250 | sp|Q05753|AKRP_ARATH | 50.478 | 418 | 186 | 6 | 39 | 450 | 17 | 419 | 1.45e-132 | 394 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484250 | A0A396HLZ4 | 83.501 | 497 | 54 | 5 | 1 | 478 | 1 | 488 | 0.0 | 798 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0484250 | 0.809054 | 2.287382e-50 | -8.615850e-47 |
| Msa0009530 | Msa0484250 | 0.813977 | 1.947992e-51 | -8.615850e-47 |
| Msa0009560 | Msa0484250 | 0.806656 | 7.398145e-50 | -8.615850e-47 |
| Msa0020320 | Msa0484250 | 0.815841 | 7.517447e-52 | -8.615850e-47 |
| Msa0021980 | Msa0484250 | 0.827868 | 1.233130e-54 | -8.615850e-47 |
| Msa0032450 | Msa0484250 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0034100 | Msa0484250 | 0.830681 | 2.560715e-55 | -8.615850e-47 |
| Msa0040420 | Msa0484250 | 0.815229 | 1.028936e-51 | -8.615850e-47 |
| Msa0041780 | Msa0484250 | 0.820656 | 6.112906e-53 | -8.615850e-47 |
| Msa0049330 | Msa0484250 | 0.812113 | 4.992848e-51 | -8.615850e-47 |
| Msa0050320 | Msa0484250 | 0.814130 | 1.801933e-51 | -8.615850e-47 |
| Msa0053960 | Msa0484250 | 0.828574 | 8.336458e-55 | -8.615850e-47 |
| Msa0072390 | Msa0484250 | 0.808159 | 3.551055e-50 | -8.615850e-47 |
| Msa0072860 | Msa0484250 | 0.804073 | 2.573293e-49 | -8.615850e-47 |
| Msa0074220 | Msa0484250 | 0.802688 | 4.981152e-49 | -8.615850e-47 |
| Msa0081290 | Msa0484250 | 0.811716 | 6.090845e-51 | -8.615850e-47 |
| Msa0081790 | Msa0484250 | 0.811306 | 7.479808e-51 | -8.615850e-47 |
| Msa0087130 | Msa0484250 | 0.842327 | 2.766539e-58 | -8.615850e-47 |
| Msa0089080 | Msa0484250 | -0.802346 | 5.860701e-49 | -8.615850e-47 |
| Msa0096570 | Msa0484250 | 0.803186 | 3.931222e-49 | -8.615850e-47 |
| Msa0117300 | Msa0484250 | 0.846627 | 1.929196e-59 | -8.615850e-47 |
| Msa0120320 | Msa0484250 | 0.802318 | 5.938208e-49 | -8.615850e-47 |
| Msa0128110 | Msa0484250 | 0.835366 | 1.749479e-56 | -8.615850e-47 |
| Msa0131090 | Msa0484250 | 0.821569 | 3.765409e-53 | -8.615850e-47 |
| Msa0135470 | Msa0484250 | 0.804025 | 2.633463e-49 | -8.615850e-47 |
| Msa0136580 | Msa0484250 | 0.801692 | 7.985726e-49 | -8.615850e-47 |
| Msa0143280 | Msa0484250 | 0.840215 | 9.942547e-58 | -8.615850e-47 |
| Msa0148430 | Msa0484250 | 0.818430 | 1.967961e-52 | -8.615850e-47 |
| Msa0154720 | Msa0484250 | 0.816557 | 5.200337e-52 | -8.615850e-47 |
| Msa0160650 | Msa0484250 | 0.843680 | 1.207343e-58 | -8.615850e-47 |
| Msa0163960 | Msa0484250 | 0.842437 | 2.586949e-58 | -8.615850e-47 |
| Msa0164630 | Msa0484250 | 0.817120 | 3.889071e-52 | -8.615850e-47 |
| Msa0181410 | Msa0484250 | 0.805471 | 1.314049e-49 | -8.615850e-47 |
| Msa0184330 | Msa0484250 | 0.987646 | 5.141688e-171 | -8.615850e-47 |
| Msa0184850 | Msa0484250 | 0.830931 | 2.223675e-55 | -8.615850e-47 |
| Msa0188500 | Msa0484250 | 0.816364 | 5.746054e-52 | -8.615850e-47 |
| Msa0200870 | Msa0484250 | 0.803062 | 4.170862e-49 | -8.615850e-47 |
| Msa0208710 | Msa0484250 | 0.822078 | 2.871571e-53 | -8.615850e-47 |
| Msa0224880 | Msa0484250 | -0.807148 | 5.822513e-50 | -8.615850e-47 |
| Msa0225880 | Msa0484250 | 0.832527 | 8.982249e-56 | -8.615850e-47 |
| Msa0367590 | Msa0484250 | 0.812433 | 4.250870e-51 | -8.615850e-47 |
| Msa0372990 | Msa0484250 | 0.846930 | 1.593760e-59 | -8.615850e-47 |
| Msa0378670 | Msa0484250 | 0.880562 | 4.956324e-70 | -8.615850e-47 |
| Msa0378700 | Msa0484250 | 0.871511 | 6.461993e-67 | -8.615850e-47 |
| Msa0408160 | Msa0484250 | 0.807204 | 5.666915e-50 | -8.615850e-47 |
| Msa0419040 | Msa0484250 | 0.819788 | 9.660411e-53 | -8.615850e-47 |
| Msa0421390 | Msa0484250 | 0.817725 | 2.841190e-52 | -8.615850e-47 |
| Msa0428330 | Msa0484250 | 0.870839 | 1.077394e-66 | -8.615850e-47 |
| Msa0431940 | Msa0484250 | 0.834365 | 3.126325e-56 | -8.615850e-47 |
| Msa0447830 | Msa0484250 | 0.800969 | 1.123016e-48 | -8.615850e-47 |
| Msa0467710 | Msa0484250 | 0.815817 | 7.611386e-52 | -8.615850e-47 |
| Msa0260470 | Msa0484250 | 0.832606 | 8.590550e-56 | -8.615850e-47 |
| Msa0266380 | Msa0484250 | 0.802505 | 5.435323e-49 | -8.615850e-47 |
| Msa0272990 | Msa0484250 | 0.807924 | 3.985704e-50 | -8.615850e-47 |
| Msa0304110 | Msa0484250 | 0.831664 | 1.468841e-55 | -8.615850e-47 |
| Msa0341190 | Msa0484250 | 0.829175 | 5.963314e-55 | -8.615850e-47 |
| Msa0484250 | Msa0500490 | 0.812275 | 4.600661e-51 | -8.615850e-47 |
| Msa0484250 | Msa0518480 | 0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0484250 | Msa0520810 | 0.813618 | 2.336574e-51 | -8.615850e-47 |
| Msa0484250 | Msa0521940 | -0.816146 | 6.428169e-52 | -8.615850e-47 |
| Msa0484250 | Msa0545230 | 0.808391 | 3.168921e-50 | -8.615850e-47 |
| Msa0484250 | Msa0555510 | 0.824429 | 8.110184e-54 | -8.615850e-47 |
| Msa0484250 | Msa0556070 | 0.820877 | 5.436748e-53 | -8.615850e-47 |
| Msa0484250 | Msa0561420 | 0.821486 | 3.936162e-53 | -8.615850e-47 |
| Msa0484250 | Msa0565530 | 0.810201 | 1.296590e-50 | -8.615850e-47 |
| Msa0484250 | Msa0565760 | 0.836709 | 7.983211e-57 | -8.615850e-47 |
| Msa0484250 | Msa0565860 | 0.835241 | 1.881610e-56 | -8.615850e-47 |
| Msa0484250 | Msa0566010 | 0.839690 | 1.362384e-57 | -8.615850e-47 |
| Msa0484250 | Msa0568460 | 0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa0484250 | Msa0608940 | 0.849456 | 3.196758e-60 | -8.615850e-47 |
| Msa0484250 | Msa0615430 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0484250 | Msa0618260 | 0.817543 | 3.123214e-52 | -8.615850e-47 |
| Msa0484250 | Msa0629960 | 0.804421 | 2.178084e-49 | -8.615850e-47 |
| Msa0484250 | Msa0639030 | 0.801879 | 7.312185e-49 | -8.615850e-47 |
| Msa0484250 | Msa0648200 | 0.807185 | 5.720262e-50 | -8.615850e-47 |
| Msa0484250 | Msa0649530 | 0.838706 | 2.451587e-57 | -8.615850e-47 |
| Msa0484250 | Msa0654880 | 0.817964 | 2.508723e-52 | -8.615850e-47 |
| Msa0484250 | Msa0659020 | 0.828137 | 1.062528e-54 | -8.615850e-47 |
| Msa0484250 | Msa0691740 | 0.835295 | 1.824072e-56 | -8.615850e-47 |
| Msa0484250 | Msa0693400 | 0.835697 | 1.443411e-56 | -8.615850e-47 |
| Msa0484250 | Msa0697600 | 0.810379 | 1.187123e-50 | -8.615850e-47 |
| Msa0484250 | Msa0698480 | 0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa0484250 | Msa0698650 | 0.827802 | 1.279265e-54 | -8.615850e-47 |
| Msa0484250 | Msa0702200 | 0.816597 | 5.094251e-52 | -8.615850e-47 |
| Msa0484250 | Msa0702310 | 0.803833 | 2.886621e-49 | -8.615850e-47 |
| Msa0484250 | Msa0702360 | 0.800831 | 1.198140e-48 | -8.615850e-47 |
| Msa0484250 | Msa0702620 | 0.801328 | 9.481477e-49 | -8.615850e-47 |
| Msa0484250 | Msa0703150 | 0.802432 | 5.627377e-49 | -8.615850e-47 |
| Msa0484250 | Msa0704780 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0484250 | Msa0705050 | 0.823166 | 1.603346e-53 | -8.615850e-47 |
| Msa0484250 | Msa0712910 | 0.917137 | 7.659139e-86 | -8.615850e-47 |
| Msa0484250 | Msa0715510 | -0.816589 | 5.115572e-52 | -8.615850e-47 |
| Msa0484250 | Msa0727300 | 0.810539 | 1.096391e-50 | -8.615850e-47 |
| Msa0484250 | Msa0733240 | 0.808222 | 3.442733e-50 | -8.615850e-47 |
| Msa0484250 | Msa0734760 | 0.801436 | 9.014343e-49 | -8.615850e-47 |
| Msa0484250 | Msa0747900 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
| Msa0484250 | Msa0748980 | 0.826747 | 2.289861e-54 | -8.615850e-47 |
| Msa0484250 | Msa0749150 | 0.805130 | 1.549023e-49 | -8.615850e-47 |
| Msa0484250 | Msa0752830 | 0.803871 | 2.834796e-49 | -8.615850e-47 |
| Msa0484250 | Msa0756440 | 0.823675 | 1.219233e-53 | -8.615850e-47 |
| Msa0484250 | Msa0774360 | 0.812618 | 3.872284e-51 | -8.615850e-47 |
| Msa0484250 | Msa0774560 | 0.821678 | 3.553022e-53 | -8.615850e-47 |
| Msa0484250 | Msa0776590 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0484250 | Msa0791120 | 0.841863 | 3.671804e-58 | -8.615850e-47 |
| Msa0484250 | Msa0793100 | 0.804095 | 2.546639e-49 | -8.615850e-47 |
| Msa0484250 | Msa0797010 | 0.823095 | 1.665267e-53 | -8.615850e-47 |
| Msa0484250 | Msa0803530 | 0.843170 | 1.652413e-58 | -8.615850e-47 |
| Msa0484250 | Msa0813630 | 0.823519 | 1.326170e-53 | -8.615850e-47 |
| Msa0484250 | Msa0825520 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa0484250 | Msa0828900 | 0.804955 | 1.684480e-49 | -8.615850e-47 |
| Msa0484250 | Msa0834200 | 0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0484250 | Msa0834240 | 0.800571 | 1.353827e-48 | -8.615850e-47 |
| Msa0484250 | Msa0835550 | 0.829507 | 4.951758e-55 | -8.615850e-47 |
| Msa0484250 | Msa0838100 | 0.806308 | 8.761102e-50 | -8.615850e-47 |
| Msa0484250 | Msa0849290 | 0.829596 | 4.713159e-55 | -8.615850e-47 |
| Msa0484250 | Msa0852090 | 0.818658 | 1.747109e-52 | -8.615850e-47 |
| Msa0484250 | Msa0861480 | 0.869878 | 2.225546e-66 | -8.615850e-47 |
| Msa0484250 | Msa0861560 | 0.850356 | 1.790040e-60 | -8.615850e-47 |
| Msa0484250 | Msa0864730 | 0.816055 | 6.735095e-52 | -8.615850e-47 |
| Msa0484250 | Msa0864750 | 0.817864 | 2.643694e-52 | -8.615850e-47 |
| Msa0484250 | Msa0868040 | 0.824769 | 6.744430e-54 | -8.615850e-47 |
| Msa0484250 | Msa0884840 | 0.808432 | 3.105882e-50 | -8.615850e-47 |
| Msa0484250 | Msa0887000 | 0.800948 | 1.133960e-48 | -8.615850e-47 |
| Msa0484250 | Msa0899730 | 0.805600 | 1.234239e-49 | -8.615850e-47 |
| Msa0484250 | Msa0912110 | 0.810612 | 1.057224e-50 | -8.615850e-47 |
| Msa0484250 | Msa0927190 | 0.809862 | 1.533924e-50 | -8.615850e-47 |
| Msa0484250 | Msa0927890 | 0.808854 | 2.523478e-50 | -8.615850e-47 |
| Msa0484250 | Msa0950470 | 0.821723 | 3.469203e-53 | -8.615850e-47 |
| Msa0484250 | Msa0950570 | 0.818833 | 1.594284e-52 | -8.615850e-47 |
| Msa0484250 | Msa0967260 | 0.809940 | 1.475788e-50 | -8.615850e-47 |
| Msa0484250 | Msa0967900 | 0.807474 | 4.966502e-50 | -8.615850e-47 |
| Msa0484250 | Msa0999480 | 0.827165 | 1.819251e-54 | -8.615850e-47 |
| Msa0484250 | Msa0999590 | 0.825699 | 4.065922e-54 | -8.615850e-47 |
| Msa0484250 | Msa1010470 | 0.815809 | 7.642188e-52 | -8.615850e-47 |
| Msa0484250 | Msa1031530 | 0.827564 | 1.459205e-54 | -8.615850e-47 |
| Msa0484250 | Msa1036360 | 0.822376 | 2.448607e-53 | -8.615850e-47 |
| Msa0484250 | Msa1038110 | 0.808398 | 3.159217e-50 | -8.615850e-47 |
| Msa0484250 | Msa1040730 | -0.801183 | 1.015219e-48 | -8.615850e-47 |
| Msa0484250 | Msa1043020 | 0.814775 | 1.297162e-51 | -8.615850e-47 |
| Msa0484250 | Msa1052030 | 0.838980 | 2.082413e-57 | -8.615850e-47 |
| Msa0484250 | Msa1061760 | -0.813530 | 2.443285e-51 | -8.615850e-47 |
| Msa0484250 | Msa1067910 | 0.810569 | 1.080027e-50 | -8.615850e-47 |
| Msa0484250 | Msa1070830 | 0.803171 | 3.959634e-49 | -8.615850e-47 |
| Msa0484250 | Msa1071310 | 0.854002 | 1.644190e-61 | -8.615850e-47 |
| Msa0484250 | Msa1071460 | 0.814275 | 1.673500e-51 | -8.615850e-47 |
| Msa0484250 | Msa1076640 | 0.824297 | 8.713255e-54 | -8.615850e-47 |
| Msa0484250 | Msa1085370 | 0.811748 | 5.995522e-51 | -8.615850e-47 |
| Msa0484250 | Msa1096510 | 0.812182 | 4.822956e-51 | -8.615850e-47 |
| Msa0484250 | Msa1096520 | 0.818302 | 2.104588e-52 | -8.615850e-47 |
| Msa0484250 | Msa1096570 | 0.824692 | 7.033208e-54 | -8.615850e-47 |
| Msa0484250 | Msa1101300 | 0.859252 | 4.704708e-63 | -8.615850e-47 |
| Msa0484250 | Msa1101610 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
| Msa0484250 | Msa1108540 | -0.828781 | 7.429745e-55 | -8.615850e-47 |
| Msa0484250 | Msa1113210 | 0.819277 | 1.263950e-52 | -8.615850e-47 |
| Msa0484250 | Msa1113280 | 0.821736 | 3.444676e-53 | -8.615850e-47 |
| Msa0484250 | Msa1118770 | 0.802957 | 4.384612e-49 | -8.615850e-47 |
| Msa0484250 | Msa1125450 | 0.826616 | 2.460762e-54 | -8.615850e-47 |
| Msa0484250 | Msa1129660 | 0.811484 | 6.840025e-51 | -8.615850e-47 |
| Msa0484250 | Msa1150860 | -0.812372 | 4.382556e-51 | -8.615850e-47 |
| Msa0484250 | Msa1152290 | -0.834699 | 2.577389e-56 | -8.615850e-47 |
| Msa0484250 | Msa1158650 | 0.828436 | 9.002484e-55 | -8.615850e-47 |
| Msa0484250 | Msa1164570 | 0.837393 | 5.338382e-57 | -8.615850e-47 |
| Msa0484250 | Msa1182400 | 0.835169 | 1.962608e-56 | -8.615850e-47 |
| Msa0484250 | Msa1194680 | 0.802300 | 5.989834e-49 | -8.615850e-47 |
| Msa0484250 | Msa1199750 | 0.809475 | 1.857762e-50 | -8.615850e-47 |
| Msa0484250 | Msa1209800 | 0.805046 | 1.612467e-49 | -8.615850e-47 |
| Msa0484250 | Msa1211260 | 0.814093 | 1.836033e-51 | -8.615850e-47 |
| Msa0484250 | Msa1211300 | 0.801169 | 1.022193e-48 | -8.615850e-47 |
| Msa0484250 | Msa1211390 | 0.811266 | 7.629106e-51 | -8.615850e-47 |
| Msa0484250 | Msa1212740 | 0.802857 | 4.597967e-49 | -8.615850e-47 |
| Msa0484250 | Msa1219060 | 0.815786 | 7.735430e-52 | -8.615850e-47 |
| Msa0484250 | Msa1224820 | 0.801619 | 8.266274e-49 | -8.615850e-47 |
| Msa0484250 | Msa1228280 | 0.820632 | 6.191095e-53 | -8.615850e-47 |
| Msa0484250 | Msa1228330 | 0.816466 | 5.451447e-52 | -8.615850e-47 |
| Msa0484250 | Msa1230190 | 0.839657 | 1.389655e-57 | -8.615850e-47 |
| Msa0484250 | Msa1237260 | 0.801909 | 7.206459e-49 | -8.615850e-47 |
| Msa0484250 | Msa1242990 | 0.802625 | 5.133021e-49 | -8.615850e-47 |
| Msa0484250 | Msa1243730 | 0.804981 | 1.663721e-49 | -8.615850e-47 |
| Msa0484250 | Msa1244710 | 0.817582 | 3.060976e-52 | -8.615850e-47 |
| Msa0484250 | Msa1249410 | 0.802531 | 5.369074e-49 | -8.615850e-47 |
| Msa0484250 | Msa1272770 | 0.833903 | 4.081843e-56 | -8.615850e-47 |
| Msa0484250 | Msa1276070 | 0.812929 | 3.310249e-51 | -8.615850e-47 |
| Msa0484250 | Msa1286950 | 0.853674 | 2.044503e-61 | -8.615850e-47 |
| Msa0484250 | Msa1288970 | 0.818366 | 2.034993e-52 | -8.615850e-47 |
| Msa0484250 | Msa1289990 | 0.803345 | 3.644776e-49 | -8.615850e-47 |
| Msa0484250 | Msa1317240 | 0.804541 | 2.055532e-49 | -8.615850e-47 |
| Msa0484250 | Msa1319230 | 0.853781 | 1.903875e-61 | -8.615850e-47 |
| Msa0484250 | Msa1323260 | 0.801507 | 8.715258e-49 | -8.615850e-47 |
| Msa0484250 | Msa1328600 | 0.815448 | 9.199463e-52 | -8.615850e-47 |
| Msa0484250 | Msa1332690 | 0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0484250 | Msa1343450 | 0.817515 | 3.168863e-52 | -8.615850e-47 |
| Msa0484250 | Msa1346220 | 0.807721 | 4.401100e-50 | -8.615850e-47 |
| Msa0484250 | Msa1346340 | 0.818641 | 1.763278e-52 | -8.615850e-47 |
| Msa0484250 | Msa1348330 | -0.805374 | 1.377023e-49 | -8.615850e-47 |
| Msa0484250 | Msa1349640 | 0.817624 | 2.994675e-52 | -8.615850e-47 |
| Msa0484250 | Msa1349810 | 0.801489 | 8.788738e-49 | -8.615850e-47 |
| Msa0484250 | Msa1363560 | 0.808667 | 2.767206e-50 | -8.615850e-47 |
| Msa0484250 | Msa1368660 | 0.833975 | 3.916436e-56 | -8.615850e-47 |
| Msa0484250 | Msa1373920 | 0.800423 | 1.451604e-48 | -8.615850e-47 |
| Msa0484250 | Msa1381720 | 0.822437 | 2.370421e-53 | -8.615850e-47 |
| Msa0484250 | Msa1382750 | 0.815142 | 1.075705e-51 | -8.615850e-47 |
| Msa0484250 | Msa1384620 | 0.814221 | 1.720236e-51 | -8.615850e-47 |
| Msa0484250 | Msa1384980 | 0.830874 | 2.296862e-55 | -8.615850e-47 |
| Msa0484250 | Msa1386250 | 0.835482 | 1.635395e-56 | -8.615850e-47 |
| Msa0484250 | Msa1388270 | 0.803219 | 3.870353e-49 | -8.615850e-47 |
| Msa0484250 | Msa1395580 | 0.819898 | 9.120636e-53 | -8.615850e-47 |
| Msa0484250 | Msa1401000 | 0.807750 | 4.339165e-50 | -8.615850e-47 |
| Msa0484250 | Msa1412740 | 0.811711 | 6.106235e-51 | -8.615850e-47 |
| Msa0484250 | Msa1413900 | 0.815021 | 1.144316e-51 | -8.615850e-47 |
| Msa0484250 | Msa1432250 | 0.840570 | 8.028659e-58 | -8.615850e-47 |
| Msa0484250 | Msa1443550 | 0.808379 | 3.188072e-50 | -8.615850e-47 |
| Msa0484250 | Msa1446220 | 0.815221 | 1.032922e-51 | -8.615850e-47 |
| Msa0484250 | Msa1450630 | 0.827556 | 1.465382e-54 | -8.615850e-47 |
| Msa0484250 | Msa1450850 | 0.842473 | 2.530497e-58 | -8.615850e-47 |
| Msa0484250 | Msa1451690 | 0.818260 | 2.150394e-52 | -8.615850e-47 |
| Msa0484250 | Msa1452200 | 0.807340 | 5.303352e-50 | -8.615850e-47 |
| Msa0484250 | Msa1456620 | 0.826053 | 3.350661e-54 | -8.615850e-47 |
| Msa0484250 | Msa1459630 | 0.843363 | 1.467596e-58 | -8.615850e-47 |
| Msa0484250 | Msa1460970 | -0.807654 | 4.547165e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484250 | MtrunA17_Chr5g0406201 | 83.501 | 497 | 54 | 5 | 1 | 478 | 1 | 488 | 0.0 | 798 |
| Msa0484250 | MtrunA17_Chr5g0405451 | 74.322 | 479 | 81 | 9 | 1 | 478 | 1 | 438 | 0.0 | 650 |
| Msa0484250 | MtrunA17_Chr2g0303671 | 44.865 | 185 | 100 | 2 | 267 | 450 | 124 | 307 | 1.57e-50 | 174 |
| Msa0484250 | MtrunA17_Chr5g0418551 | 31.655 | 139 | 94 | 1 | 289 | 427 | 89 | 226 | 5.01e-15 | 74.7 |
| Msa0484250 | MtrunA17_Chr5g0418551 | 32.353 | 136 | 90 | 1 | 294 | 427 | 58 | 193 | 3.83e-14 | 72.4 |
| Msa0484250 | MtrunA17_Chr5g0409271 | 30.657 | 137 | 95 | 0 | 294 | 430 | 15 | 151 | 2.35e-14 | 73.2 |
| Msa0484250 | MtrunA17_Chr5g0434371 | 37.179 | 156 | 89 | 4 | 293 | 447 | 591 | 738 | 5.06e-12 | 68.6 |
| Msa0484250 | MtrunA17_Chr2g0328031 | 30.675 | 163 | 95 | 4 | 289 | 434 | 45 | 206 | 9.34e-12 | 67.0 |
| Msa0484250 | MtrunA17_Chr6g0461061 | 26.172 | 256 | 175 | 6 | 202 | 445 | 111 | 364 | 1.67e-11 | 66.6 |
| Msa0484250 | MtrunA17_Chr3g0127131 | 34.694 | 98 | 62 | 1 | 335 | 430 | 246 | 343 | 3.86e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0484250 | AT5G66055.1 | 50.478 | 418 | 186 | 6 | 39 | 450 | 17 | 419 | 1.47e-133 | 394 |
| Msa0484250 | AT5G66055.2 | 46.648 | 358 | 170 | 6 | 39 | 390 | 17 | 359 | 3.04e-97 | 298 |
| Msa0484250 | AT5G40160.1 | 46.739 | 184 | 96 | 2 | 271 | 453 | 132 | 314 | 2.39e-49 | 172 |
| Msa0484250 | AT5G40160.2 | 46.711 | 152 | 79 | 2 | 271 | 421 | 132 | 282 | 1.95e-39 | 145 |
| Msa0484250 | AT5G53470.1 | 36.735 | 98 | 60 | 1 | 335 | 430 | 227 | 324 | 4.37e-13 | 70.9 |
| Msa0484250 | AT4G27780.1 | 40.506 | 79 | 47 | 0 | 352 | 430 | 261 | 339 | 2.55e-12 | 68.6 |
| Msa0484250 | AT2G14255.1 | 32.450 | 151 | 98 | 3 | 282 | 429 | 83 | 232 | 7.32e-12 | 68.2 |
| Msa0484250 | AT2G25600.1 | 34.043 | 141 | 90 | 2 | 294 | 434 | 581 | 718 | 1.44e-11 | 67.4 |
| Msa0484250 | AT2G03430.1 | 30.216 | 139 | 96 | 1 | 289 | 427 | 82 | 219 | 4.33e-11 | 63.5 |
Find 92 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTATTTGTAGGATAAA+TGG | 0.172018 | 3_4:-1581697 | Msa0484250:intron |
| AATCCTAGGTGGGCTGTTTA+TGG | 0.193086 | 3_4:-1583483 | Msa0484250:CDS |
| TTCTTCTTTGAATTGGGTTT+TGG | 0.201950 | 3_4:+1583852 | None:intergenic |
| ATAATCTTGTTCCTGATAAA+TGG | 0.227663 | 3_4:-1583806 | Msa0484250:CDS |
| GTTGGTTCCTTTGAGGGATA+TGG | 0.236009 | 3_4:-1583652 | Msa0484250:CDS |
| TGAACTTGTTTCCATTTATC+AGG | 0.246834 | 3_4:+1583795 | None:intergenic |
| GCTCTTTACAAAGCAATAAT+TGG | 0.250325 | 3_4:-1581483 | Msa0484250:CDS |
| AAGAAGAGTGTTTGGGGTTG+AGG | 0.254417 | 3_4:+1584113 | None:intergenic |
| GACTCTGCTGCTAAGAAAAT+TGG | 0.257867 | 3_4:-1583414 | Msa0484250:CDS |
| AGGGAGAGAAGAAGAGTGTT+TGG | 0.286570 | 3_4:+1584105 | None:intergenic |
| GTGGAGCTTCTGCTGATTAA+AGG | 0.288706 | 3_4:-1580666 | Msa0484250:CDS |
| CATATGGAAACTTTAGCTTT+AGG | 0.289789 | 3_4:-1579415 | Msa0484250:three_prime_UTR |
| GGGAGAGAAGAAGAGTGTTT+GGG | 0.319442 | 3_4:+1584106 | None:intergenic |
| GCTGCAACAAAGTATCTAAA+AGG | 0.328401 | 3_4:+1581636 | None:intergenic |
| AGCTTATAAAGAAACTAAAT+TGG | 0.344627 | 3_4:-1583613 | Msa0484250:CDS |
| GCTATTCTTCACTTCCTTGT+TGG | 0.353333 | 3_4:+1579480 | None:intergenic |
| TTTGTGGAGGTTGCGGTTTG+TGG | 0.356508 | 3_4:+1584016 | None:intergenic |
| TTGTGGAGGTTGCGGTTTGT+GGG | 0.357117 | 3_4:+1584017 | None:intergenic |
| TCAATCTCTTGAGCTTTCTT+AGG | 0.357792 | 3_4:+1583708 | None:intergenic |
| ATTGGCTCAGCTGACGCCTT+TGG | 0.365909 | 3_4:-1583595 | Msa0484250:CDS |
| CCGTCGGGCGCGTCTATATA+AGG | 0.372189 | 3_4:+1579541 | None:intergenic |
| CAATGTGGATATAAATCTTC+GGG | 0.377195 | 3_4:-1580836 | Msa0484250:CDS |
| CTCTCGGGCGCGTCTATATA+AGG | 0.380106 | 3_4:+1579590 | None:intergenic |
| ATCCTAGGTGGGCTGTTTAT+GGG | 0.393025 | 3_4:-1583482 | Msa0484250:CDS |
| GACGCCTTTGGTTCTTGATA+AGG | 0.399997 | 3_4:-1583583 | Msa0484250:CDS |
| AGCAGAAGCTCCACTATATC+AGG | 0.401672 | 3_4:+1580675 | None:intergenic |
| CAGAGTTTCTCACGAGAAGA+TGG | 0.403613 | 3_4:+1581442 | None:intergenic |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 3_4:+1581414 | None:intergenic |
| TTTATCAGGAACAAGATTAT+CGG | 0.417473 | 3_4:+1583809 | None:intergenic |
| AAGAAGGTTGGTTCCTTTGA+GGG | 0.419078 | 3_4:-1583658 | Msa0484250:CDS |
| ACAATGTGGATATAAATCTT+CGG | 0.421567 | 3_4:-1580837 | Msa0484250:CDS |
| TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 3_4:-1580731 | Msa0484250:intron |
| GAAAGGGTTGGAGGATGTTA+AGG | 0.424735 | 3_4:-1583460 | Msa0484250:CDS |
| AAAGAAGGTTGGTTCCTTTG+AGG | 0.431464 | 3_4:-1583659 | Msa0484250:CDS |
| TGATATTAATGCTATGGATA+AGG | 0.439944 | 3_4:-1581603 | Msa0484250:intron |
| TCTCACGAGAAGATGGGTTA+TGG | 0.444360 | 3_4:+1581449 | None:intergenic |
| AGGTGGGCTGTTTATGGGAA+AGG | 0.444581 | 3_4:-1583477 | Msa0484250:CDS |
| ACAAGAGTGCTTTAATTGCT+CGG | 0.449055 | 3_4:+1580863 | None:intergenic |
| CAACAAATCCCTCTCTTCCC+AGG | 0.458338 | 3_4:+1582058 | None:intergenic |
| GTGGAGGTTGCGGTTTGTGG+GGG | 0.463790 | 3_4:+1584019 | None:intergenic |
| GGCTGTTTATGGGAAAGGGT+TGG | 0.464497 | 3_4:-1583472 | Msa0484250:CDS |
| CAAGAGTGCTTTAATTGCTC+GGG | 0.466031 | 3_4:+1580864 | None:intergenic |
| ATAGACGCGCCCGACGGAAG+TGG | 0.466914 | 3_4:-1579535 | Msa0484250:CDS |
| GGGTAGAGGCTAGGAATCCT+AGG | 0.467709 | 3_4:-1583497 | Msa0484250:CDS |
| TGTTTATGGGAAAGGGTTGG+AGG | 0.474904 | 3_4:-1583469 | Msa0484250:CDS |
| GCAAGCAGCTCTTCAGCATA+TGG | 0.476206 | 3_4:-1579431 | Msa0484250:three_prime_UTR |
| GACTCAGAGACCTGATATAG+TGG | 0.487183 | 3_4:-1580685 | Msa0484250:CDS |
| ACGAGGTTGTTGTCGGATGT+TGG | 0.490340 | 3_4:+1583888 | None:intergenic |
| GAAGTAGCAACTGTCAAGTC+TGG | 0.492247 | 3_4:+1582023 | None:intergenic |
| AACTTGATTAACTCGTCTCT+CGG | 0.494680 | 3_4:+1579574 | None:intergenic |
| GGTGTCTACGAGGTTGTTGT+CGG | 0.495959 | 3_4:+1583881 | None:intergenic |
| GGTGGGCTGTTTATGGGAAA+GGG | 0.497865 | 3_4:-1583476 | Msa0484250:CDS |
| GTGAAGAGAGGGTAGAGGCT+AGG | 0.499732 | 3_4:-1583506 | Msa0484250:CDS |
| AGATTGAAACACGCGGGGTG+TGG | 0.500130 | 3_4:+1584058 | None:intergenic |
| CTCGACCTTTGCCTTTACTC+TGG | 0.500612 | 3_4:-1579659 | Msa0484250:CDS |
| CGTTGTCGTTGTTGTCATGT+TGG | 0.504827 | 3_4:+1583976 | None:intergenic |
| ACTTGATTAACTCGTCTCTC+GGG | 0.510011 | 3_4:+1579575 | None:intergenic |
| TAGATGGGTTGAGTGAAGAG+AGG | 0.516517 | 3_4:-1583518 | Msa0484250:CDS |
| AGATGGGTTGAGTGAAGAGA+GGG | 0.518172 | 3_4:-1583517 | Msa0484250:CDS |
| AAGTTATGAAGCTGAAAAGA+AGG | 0.520767 | 3_4:-1583674 | Msa0484250:CDS |
| TGTTGTTGATATTAATGCTA+TGG | 0.523920 | 3_4:-1581609 | Msa0484250:CDS |
| GGGGTTGAGGATTATGAACA+AGG | 0.524893 | 3_4:+1584126 | None:intergenic |
| TGGAGGTTGCGGTTTGTGGG+GGG | 0.528206 | 3_4:+1584020 | None:intergenic |
| GTTGAGTGAAGAGAGGGTAG+AGG | 0.529804 | 3_4:-1583511 | Msa0484250:CDS |
| TATGAAGCTGAAAAGAAGGT+TGG | 0.530164 | 3_4:-1583670 | Msa0484250:CDS |
| GGAGAGAAGAAGAGTGTTTG+GGG | 0.538908 | 3_4:+1584107 | None:intergenic |
| TTTGTTTACCTGGGAAGAGA+GGG | 0.546480 | 3_4:-1582066 | Msa0484250:CDS |
| TGTGGAGGTTGCGGTTTGTG+GGG | 0.546780 | 3_4:+1584018 | None:intergenic |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 3_4:+1580705 | None:intergenic |
| AGAGTTTCTCACGAGAAGAT+GGG | 0.560384 | 3_4:+1581443 | None:intergenic |
| TGCTGATTAAAGGTGCTGAT+CGG | 0.580074 | 3_4:-1580656 | Msa0484250:CDS |
| TCTGCTGCTAAGAAAATTGG+AGG | 0.583455 | 3_4:-1583411 | Msa0484250:intron |
| GAGTAAAGGCAAAGGTCGAG+TGG | 0.584489 | 3_4:+1579662 | None:intergenic |
| TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 3_4:+1583645 | None:intergenic |
| TAAACATAACAAAGAAAGAA+CGG | 0.601565 | 3_4:-1583731 | Msa0484250:CDS |
| GAAACTTTAGCTTTAGGACA+AGG | 0.609493 | 3_4:-1579409 | Msa0484250:three_prime_UTR |
| AGAGGCTAGGAATCCTAGGT+GGG | 0.610369 | 3_4:-1583493 | Msa0484250:CDS |
| CTCGCAGCAAAAGTGTGCAA+AGG | 0.613261 | 3_4:+1581671 | None:intergenic |
| TTGAGGATTATGAACAAGGG+TGG | 0.616303 | 3_4:+1584130 | None:intergenic |
| TAGAGGCTAGGAATCCTAGG+TGG | 0.621675 | 3_4:-1583494 | Msa0484250:CDS |
| GGGTTGAGGATTATGAACAA+GGG | 0.627814 | 3_4:+1584127 | None:intergenic |
| TTGAAAAGATTGAAACACGC+GGG | 0.638533 | 3_4:+1584052 | None:intergenic |
| TTTGAAGATCTGGACCAACA+AGG | 0.648499 | 3_4:-1579494 | Msa0484250:CDS |
| TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 3_4:+1580897 | None:intergenic |
| TTCCCATAAACAGCCCACCT+AGG | 0.650174 | 3_4:+1583480 | None:intergenic |
| AACGACGAAGAACACATCAT+CGG | 0.651065 | 3_4:-1583957 | Msa0484250:CDS |
| TTTGACCAGAGTAAAGGCAA+AGG | 0.667685 | 3_4:+1579654 | None:intergenic |
| GGAACCTTATCAAGAACCAA+AGG | 0.680338 | 3_4:+1583579 | None:intergenic |
| CCTTATATAGACGCGCCCGA+CGG | 0.680984 | 3_4:-1579541 | Msa0484250:CDS |
| TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 3_4:+1580900 | None:intergenic |
| TGAAAAGATTGAAACACGCG+GGG | 0.723067 | 3_4:+1584053 | None:intergenic |
| GTTGAAAAGATTGAAACACG+CGG | 0.730091 | 3_4:+1584051 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAGTTAAAACAAATTTA+TGG | - | chr3_4:1580683-1580702 | Msa0484250:CDS | 15.0% |
| !! | GTTAGTTAAAACAAATTTAT+GGG | - | chr3_4:1580684-1580703 | Msa0484250:CDS | 15.0% |
| !!! | TATATATGGTTTTTAAATGT+TGG | - | chr3_4:1581340-1581359 | Msa0484250:intron | 15.0% |
| !! | ATTATATATTGAACTGTTAT+TGG | - | chr3_4:1581527-1581546 | Msa0484250:intron | 15.0% |
| !!! | CTCTATATTTATGTTTTTAA+TGG | - | chr3_4:1581750-1581769 | Msa0484250:intron | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | + | chr3_4:1582475-1582494 | None:intergenic | 15.0% |
| !! | AACTATATGTTAATAGATTA+AGG | + | chr3_4:1582476-1582495 | None:intergenic | 15.0% |
| !! | TGAAATTGATAGATTAATAT+AGG | + | chr3_4:1582879-1582898 | None:intergenic | 15.0% |
| !! | AATAATTTACAAAATAGAAG+CGG | - | chr3_4:1582960-1582979 | Msa0484250:intron | 15.0% |
| !!! | AAAACTTTCAATTGTTATTT+AGG | - | chr3_4:1583344-1583363 | Msa0484250:intron | 15.0% |
| !! | AAATATCAATGTAAAAGAAA+TGG | + | chr3_4:1583753-1583772 | None:intergenic | 15.0% |
| !! | TTTGCATAAAAATAAAAAGA+AGG | - | chr3_4:1584146-1584165 | Msa0484250:CDS | 15.0% |
| !! | TAAAAATGTGATTTCAAATT+TGG | - | chr3_4:1584194-1584213 | Msa0484250:exon | 15.0% |
| !!! | CATTCAAGTTAGTTTTTTTT+TGG | + | chr3_4:1579283-1579302 | None:intergenic | 20.0% |
| !!! | AGTTTTTTCTTCTTTGAATT+GGG | + | chr3_4:1579633-1579652 | None:intergenic | 20.0% |
| !!! | TAGTTTTTTCTTCTTTGAAT+TGG | + | chr3_4:1579634-1579653 | None:intergenic | 20.0% |
| !! | TAAACATAACAAAGAAAGAA+CGG | - | chr3_4:1579745-1579764 | Msa0484250:intron | 20.0% |
| !! | AGCTTATAAAGAAACTAAAT+TGG | - | chr3_4:1579863-1579882 | Msa0484250:intron | 20.0% |
| !!! | TTTGTATTTACAATCTGTTT+TGG | - | chr3_4:1580091-1580110 | Msa0484250:intron | 20.0% |
| !! | TGCTTCATATATTATTGTTT+AGG | - | chr3_4:1580409-1580428 | Msa0484250:intron | 20.0% |
| !! | GCTTCATATATTATTGTTTA+GGG | - | chr3_4:1580410-1580429 | Msa0484250:intron | 20.0% |
| !!! | GACATTTTAAAAAATAAGTG+TGG | - | chr3_4:1580631-1580650 | Msa0484250:intron | 20.0% |
| !!! | TTGCATTTGCTTTTAATTTA+TGG | - | chr3_4:1580655-1580674 | Msa0484250:CDS | 20.0% |
| !!! | TGCATTTGCTTTTAATTTAT+GGG | - | chr3_4:1580656-1580675 | Msa0484250:CDS | 20.0% |
| !! | AAAAATGCTTATAAGTTTAC+CGG | - | chr3_4:1580708-1580727 | Msa0484250:CDS | 20.0% |
| !! | TCTATTGTATTAAAAACTCA+CGG | - | chr3_4:1580806-1580825 | Msa0484250:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | + | chr3_4:1580881-1580900 | None:intergenic | 20.0% |
| !! | TGTATCTAGTAATTTGAAAA+GGG | + | chr3_4:1580916-1580935 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+AGG | + | chr3_4:1580917-1580936 | None:intergenic | 20.0% |
| !! | AAGATAGTAGTATTAATTAG+GGG | + | chr3_4:1580963-1580982 | None:intergenic | 20.0% |
| !! | CAAGATAGTAGTATTAATTA+GGG | + | chr3_4:1580964-1580983 | None:intergenic | 20.0% |
| !! | ACAAGATAGTAGTATTAATT+AGG | + | chr3_4:1580965-1580984 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | - | chr3_4:1581006-1581025 | Msa0484250:intron | 20.0% |
| !! | AAGAAATATGAAAAAAGCAA+TGG | - | chr3_4:1581088-1581107 | Msa0484250:intron | 20.0% |
| !! | AGAAATATGAAAAAAGCAAT+GGG | - | chr3_4:1581089-1581108 | Msa0484250:intron | 20.0% |
| !!! | AAATGGATCATTTTATTCAT+TGG | - | chr3_4:1581262-1581281 | Msa0484250:intron | 20.0% |
| !! | ATATAGAGATTATTAACCAA+AGG | + | chr3_4:1581738-1581757 | None:intergenic | 20.0% |
| !! | AATCACAATAGTTTAAATAG+AGG | + | chr3_4:1581944-1581963 | None:intergenic | 20.0% |
| !!! | TGATTTGTTTTACTTTTTCA+AGG | - | chr3_4:1581959-1581978 | Msa0484250:intron | 20.0% |
| !! | AATATGTTGAAAACAACTTA+TGG | - | chr3_4:1582357-1582376 | Msa0484250:intron | 20.0% |
| !! | ATAATTTACAAAATAGAAGC+GGG | - | chr3_4:1582961-1582980 | Msa0484250:intron | 20.0% |
| !!! | TGAATATAGATGCTTTTAAT+GGG | - | chr3_4:1582985-1583004 | Msa0484250:intron | 20.0% |
| !! | AGTTATCTGATTTAAATGAA+AGG | - | chr3_4:1583228-1583247 | Msa0484250:intron | 20.0% |
| !! | AACAAAATATTCATCAATCA+CGG | + | chr3_4:1583566-1583585 | None:intergenic | 20.0% |
| !!! | ATATCATAATATTTTGTCTG+TGG | - | chr3_4:1583655-1583674 | Msa0484250:CDS | 20.0% |
| !!! | AAATAAAACTTTTGAAGATC+TGG | - | chr3_4:1583972-1583991 | Msa0484250:CDS | 20.0% |
| !! | ATGCATTCAAAAATATGATA+GGG | - | chr3_4:1584112-1584131 | Msa0484250:CDS | 20.0% |
| ! | TTTATCAGGAACAAGATTAT+CGG | + | chr3_4:1579670-1579689 | None:intergenic | 25.0% |
| ! | ATAATCTTGTTCCTGATAAA+TGG | - | chr3_4:1579670-1579689 | Msa0484250:CDS | 25.0% |
| ! | TGCTAATTAGATTATTGTGT+TGG | - | chr3_4:1580292-1580311 | Msa0484250:intron | 25.0% |
| ! | GCTAATTAGATTATTGTGTT+GGG | - | chr3_4:1580293-1580312 | Msa0484250:intron | 25.0% |
| ! | ATGAAAAAGTTGAGATATAG+AGG | - | chr3_4:1580761-1580780 | Msa0484250:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | + | chr3_4:1580882-1580901 | None:intergenic | 25.0% |
| ! | GTATCTAGTAATTTGAAAAG+GGG | + | chr3_4:1580915-1580934 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr3_4:1580953-1580972 | None:intergenic | 25.0% |
| !! | TCTCTTTAGATAAGTGTTTT+TGG | - | chr3_4:1581141-1581160 | Msa0484250:intron | 25.0% |
| ! | GAAATTTGATTGCGATAAAA+TGG | - | chr3_4:1581245-1581264 | Msa0484250:intron | 25.0% |
| !! | ATCTTCATTTTATCCGATTT+TGG | - | chr3_4:1581302-1581321 | Msa0484250:intron | 25.0% |
| ! | TCTCATTGTTTGCATATATA+TGG | - | chr3_4:1581326-1581345 | Msa0484250:intron | 25.0% |
| !! | GTTTTTAAATGTTGGCATTT+TGG | - | chr3_4:1581348-1581367 | Msa0484250:intron | 25.0% |
| !!! | AGTTGCATTTTTTTCAATGT+TGG | - | chr3_4:1581666-1581685 | Msa0484250:CDS | 25.0% |
| ! | CTCATTATTTGTAGGATAAA+TGG | - | chr3_4:1581779-1581798 | Msa0484250:intron | 25.0% |
| ! | TGTTGTTGATATTAATGCTA+TGG | - | chr3_4:1581867-1581886 | Msa0484250:intron | 25.0% |
| ! | TGATATTAATGCTATGGATA+AGG | - | chr3_4:1581873-1581892 | Msa0484250:intron | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | - | chr3_4:1581963-1581982 | Msa0484250:intron | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | + | chr3_4:1582129-1582148 | None:intergenic | 25.0% |
| ! | ACAATGTGGATATAAATCTT+CGG | - | chr3_4:1582639-1582658 | Msa0484250:intron | 25.0% |
| !! | TGATCAATTTTTCCAATACT+TGG | - | chr3_4:1582671-1582690 | Msa0484250:intron | 25.0% |
| !! | TGAATTTTGTTCTCAAACAT+CGG | + | chr3_4:1582724-1582743 | None:intergenic | 25.0% |
| !! | CTGAATATAGATGCTTTTAA+TGG | - | chr3_4:1582984-1583003 | Msa0484250:intron | 25.0% |
| ! | TTATATGTAACCTCATGTAT+TGG | - | chr3_4:1583119-1583138 | Msa0484250:intron | 25.0% |
| !! | AATCAGATAACTAGTTCTTA+AGG | + | chr3_4:1583220-1583239 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTTCAACTGAT+AGG | + | chr3_4:1583332-1583351 | None:intergenic | 25.0% |
| !!! | TAATTTTTTGATCCAAGCAT+AGG | + | chr3_4:1583432-1583451 | None:intergenic | 25.0% |
| ! | GATGCATTCAAAAATATGAT+AGG | - | chr3_4:1584111-1584130 | Msa0484250:CDS | 25.0% |
| !!! | TGAATTGGGTTTTGGTTTTT+TGG | + | chr3_4:1579619-1579638 | None:intergenic | 30.0% |
| ! | TTCTTCTTTGAATTGGGTTT+TGG | + | chr3_4:1579627-1579646 | None:intergenic | 30.0% |
| ! | TGAACTTGTTTCCATTTATC+AGG | + | chr3_4:1579684-1579703 | None:intergenic | 30.0% |
| AAGTTATGAAGCTGAAAAGA+AGG | - | chr3_4:1579802-1579821 | Msa0484250:intron | 30.0% | |
| TTCTCAGCAAAACAAAAACT+CGG | + | chr3_4:1579921-1579940 | None:intergenic | 30.0% | |
| !! | TTGTTTTGCTGAGAAAAAGA+AGG | - | chr3_4:1579926-1579945 | Msa0484250:intron | 30.0% |
| AAGAAGGAAAAAGAAGTAGA+TGG | - | chr3_4:1579942-1579961 | Msa0484250:intron | 30.0% | |
| AGAAGGAAAAAGAAGTAGAT+GGG | - | chr3_4:1579943-1579962 | Msa0484250:intron | 30.0% | |
| GAGACTAGAAGTTATTACAT+AGG | + | chr3_4:1580157-1580176 | None:intergenic | 30.0% | |
| TACGTTTGGTATATATGTGT+CGG | - | chr3_4:1580239-1580258 | Msa0484250:intron | 30.0% | |
| AGCGATACAGATAAATATAC+CGG | + | chr3_4:1580390-1580409 | None:intergenic | 30.0% | |
| ! | TTCTGCTTGTTAGATAACTT+TGG | - | chr3_4:1580555-1580574 | Msa0484250:intron | 30.0% |
| AAAATGTCAATACATCACCA+AGG | + | chr3_4:1580619-1580638 | None:intergenic | 30.0% | |
| !! | TTTAACTTTTCAATAAGCGC+CGG | + | chr3_4:1580730-1580749 | None:intergenic | 30.0% |
| TGAAAAGGGGTTTACATTTA+GGG | + | chr3_4:1580902-1580921 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | + | chr3_4:1580903-1580922 | None:intergenic | 30.0% | |
| !!! | TTAGATAAGTGTTTTTGGAG+AGG | - | chr3_4:1581146-1581165 | Msa0484250:intron | 30.0% |
| ! | TGGATCATTTTATTCATTGG+CGG | - | chr3_4:1581265-1581284 | Msa0484250:intron | 30.0% |
| CAAACAATGAGAACCAAAAT+CGG | + | chr3_4:1581318-1581337 | None:intergenic | 30.0% | |
| !!! | TCTTCCTTTTTTGTTTACCT+GGG | - | chr3_4:1581401-1581420 | Msa0484250:intron | 30.0% |
| TTACTTCAACATCAAAACGA+AGG | + | chr3_4:1581575-1581594 | None:intergenic | 30.0% | |
| CTAAGATTACTCAACATCAA+CGG | + | chr3_4:1581610-1581629 | None:intergenic | 30.0% | |
| ACACAGAAGATTATAATGTG+TGG | - | chr3_4:1581915-1581934 | Msa0484250:intron | 30.0% | |
| GCTCTTTACAAAGCAATAAT+TGG | - | chr3_4:1581993-1582012 | Msa0484250:intron | 30.0% | |
| CGTTGTTATCATTACATCTT+AGG | - | chr3_4:1582202-1582221 | Msa0484250:intron | 30.0% | |
| ! | ACTGTTTTCATTAGCTATTC+TGG | - | chr3_4:1582323-1582342 | Msa0484250:intron | 30.0% |
| ! | CTGTTTTCATTAGCTATTCT+GGG | - | chr3_4:1582324-1582343 | Msa0484250:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | + | chr3_4:1582466-1582485 | None:intergenic | 30.0% |
| TTATATCCTTAGTTAGCTGT+TGG | - | chr3_4:1582497-1582516 | Msa0484250:intron | 30.0% | |
| TAAACAACAAAGCAAATGCA+TGG | + | chr3_4:1582535-1582554 | None:intergenic | 30.0% | |
| CAATGTGGATATAAATCTTC+GGG | - | chr3_4:1582640-1582659 | Msa0484250:intron | 30.0% | |
| ! | ATCTACCTCTTATTCTTTTG+TGG | - | chr3_4:1582697-1582716 | Msa0484250:intron | 30.0% |
| AAATTCATTTGCTCTGTCTT+AGG | - | chr3_4:1582737-1582756 | Msa0484250:intron | 30.0% | |
| TGATCGGACATTAAAAAACA+AGG | - | chr3_4:1582836-1582855 | Msa0484250:intron | 30.0% | |
| ! | AGATAACTAGTTCTTAAGGA+CGG | + | chr3_4:1583216-1583235 | None:intergenic | 30.0% |
| TTTAATGACTCTGACAACTT+TGG | + | chr3_4:1583307-1583326 | None:intergenic | 30.0% | |
| !! | TACTAGAGTATTGTTCAACT+CGG | - | chr3_4:1583614-1583633 | Msa0484250:CDS | 30.0% |
| ! | ATTTATCTCTTGTTTGTCTC+AGG | - | chr3_4:1583780-1583799 | Msa0484250:CDS | 30.0% |
| !! | CATATGGAAACTTTAGCTTT+AGG | - | chr3_4:1584061-1584080 | Msa0484250:CDS | 30.0% |
| GAAGAAGAAGAAGAAGAGAA+GGG | + | chr3_4:1579393-1579412 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAGA+AGG | + | chr3_4:1579394-1579413 | None:intergenic | 35.0% | |
| TTGAAAAGATTGAAACACGC+GGG | + | chr3_4:1579427-1579446 | None:intergenic | 35.0% | |
| GTTGAAAAGATTGAAACACG+CGG | + | chr3_4:1579428-1579447 | None:intergenic | 35.0% | |
| ! | ATGAAGAGAGAATTTTGTGG+AGG | + | chr3_4:1579476-1579495 | None:intergenic | 35.0% |
| ! | GTGATGAAGAGAGAATTTTG+TGG | + | chr3_4:1579479-1579498 | None:intergenic | 35.0% |
| !!! | GATTGTCTTGTTTTCGAAGA+AGG | - | chr3_4:1579543-1579562 | Msa0484250:CDS | 35.0% |
| TCAATCTCTTGAGCTTTCTT+AGG | + | chr3_4:1579771-1579790 | None:intergenic | 35.0% | |
| TATGAAGCTGAAAAGAAGGT+TGG | - | chr3_4:1579806-1579825 | Msa0484250:intron | 35.0% | |
| TTCAAATCCATATCCCTCAA+AGG | + | chr3_4:1579834-1579853 | None:intergenic | 35.0% | |
| TTTGTTAATGTACGTTGTCG+AGG | - | chr3_4:1580121-1580140 | Msa0484250:intron | 35.0% | |
| CATACACATGTAGTTACCTT+TGG | - | chr3_4:1580342-1580361 | Msa0484250:intron | 35.0% | |
| TTGTGTCTGACACAAATACT+TGG | + | chr3_4:1580453-1580472 | None:intergenic | 35.0% | |
| CTATGTGTCAATGTCATATC+CGG | - | chr3_4:1580496-1580515 | Msa0484250:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | - | chr3_4:1580599-1580618 | Msa0484250:intron | 35.0% | |
| CAAATGGGTGCTTAGATATA+GGG | + | chr3_4:1580866-1580885 | None:intergenic | 35.0% | |
| TCAAATGGGTGCTTAGATAT+AGG | + | chr3_4:1580867-1580886 | None:intergenic | 35.0% | |
| TTGGAGAGGTTTATCCAAAA+TGG | - | chr3_4:1581160-1581179 | Msa0484250:intron | 35.0% | |
| ATCCAAAATGGCTCTTAAGT+TGG | - | chr3_4:1581172-1581191 | Msa0484250:intron | 35.0% | |
| TCACAACCTTTGGTACTTAA+TGG | - | chr3_4:1581202-1581221 | Msa0484250:intron | 35.0% | |
| CATCATCCATTAAGTACCAA+AGG | + | chr3_4:1581211-1581230 | None:intergenic | 35.0% | |
| ! | CTTTGGTACTTAATGGATGA+TGG | - | chr3_4:1581209-1581228 | Msa0484250:intron | 35.0% |
| TCTTTCATACTTGCCTGAAT+AGG | - | chr3_4:1581378-1581397 | Msa0484250:intron | 35.0% | |
| CAAAAAAGGAAGACCTATTC+AGG | + | chr3_4:1581394-1581413 | None:intergenic | 35.0% | |
| !!! | GTCTTCCTTTTTTGTTTACC+TGG | - | chr3_4:1581400-1581419 | Msa0484250:intron | 35.0% |
| TCTTCCCAGGTAAACAAAAA+AGG | + | chr3_4:1581408-1581427 | None:intergenic | 35.0% | |
| TGAGTAATCTTAGTAGCTGT+TGG | - | chr3_4:1581617-1581636 | Msa0484250:CDS | 35.0% | |
| ! | TGGAATCATGATAGAAGTGT+AGG | - | chr3_4:1581686-1581705 | Msa0484250:CDS | 35.0% |
| ! | AATCATGATAGAAGTGTAGG+AGG | - | chr3_4:1581689-1581708 | Msa0484250:intron | 35.0% |
| ! | ATTCACTTGTTTGTTGCCTT+TGG | - | chr3_4:1581719-1581738 | Msa0484250:intron | 35.0% |
| GGCTAACACTCATTATTTGT+AGG | - | chr3_4:1581771-1581790 | Msa0484250:intron | 35.0% | |
| ! | GCTGCAACAAAGTATCTAAA+AGG | + | chr3_4:1581843-1581862 | None:intergenic | 35.0% |
| CTCACATTATCTTGCACAAA+CGG | + | chr3_4:1582065-1582084 | None:intergenic | 35.0% | |
| AGACTATTCAGAAGAGCTTA+TGG | + | chr3_4:1582402-1582421 | None:intergenic | 35.0% | |
| AAGCAAATGCATGGAATATC+AGG | + | chr3_4:1582526-1582545 | None:intergenic | 35.0% | |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | - | chr3_4:1582540-1582559 | Msa0484250:intron | 35.0% |
| !! | ACAAGAGTGCTTTAATTGCT+CGG | + | chr3_4:1582616-1582635 | None:intergenic | 35.0% |
| !!! | AGCACTCTTGTTTTACAATG+TGG | - | chr3_4:1582625-1582644 | Msa0484250:intron | 35.0% |
| !! | AGATGCTTTTAATGGGTCAT+TGG | - | chr3_4:1582992-1583011 | Msa0484250:intron | 35.0% |
| GGTAAAATATCAGTTGTCAC+TGG | - | chr3_4:1583013-1583032 | Msa0484250:intron | 35.0% | |
| ! | ATGCATTCAATCTGAAGTGT+TGG | - | chr3_4:1583162-1583181 | Msa0484250:intron | 35.0% |
| ! | GATAACTAGTTCTTAAGGAC+GGG | + | chr3_4:1583215-1583234 | None:intergenic | 35.0% |
| TCAACAAAGAAGCAAGTGAT+TGG | + | chr3_4:1583385-1583404 | None:intergenic | 35.0% | |
| GTTGTCTAGCAGATTAATAC+TGG | - | chr3_4:1583727-1583746 | Msa0484250:CDS | 35.0% | |
| !! | TGACATTTTGACCAGAGTAA+AGG | + | chr3_4:1583831-1583850 | None:intergenic | 35.0% |
| AACTTGATTAACTCGTCTCT+CGG | + | chr3_4:1583905-1583924 | None:intergenic | 35.0% | |
| ! | TTTTTCTTATCCACTTCCGT+CGG | + | chr3_4:1583954-1583973 | None:intergenic | 35.0% |
| !! | GAAACTTTAGCTTTAGGACA+AGG | - | chr3_4:1584067-1584086 | Msa0484250:CDS | 35.0% |
| TTGAGGATTATGAACAAGGG+TGG | + | chr3_4:1579349-1579368 | None:intergenic | 40.0% | |
| GGGTTGAGGATTATGAACAA+GGG | + | chr3_4:1579352-1579371 | None:intergenic | 40.0% | |
| TGAAAAGATTGAAACACGCG+GGG | + | chr3_4:1579426-1579445 | None:intergenic | 40.0% | |
| ! | AGAGAATTTTGTGGAGGTTG+CGG | + | chr3_4:1579470-1579489 | None:intergenic | 40.0% |
| AACGACGAAGAACACATCAT+CGG | - | chr3_4:1579519-1579538 | Msa0484250:CDS | 40.0% | |
| TTGTCGGATGTTGGAAAAAC+GGG | + | chr3_4:1579582-1579601 | None:intergenic | 40.0% | |
| GTTGTCGGATGTTGGAAAAA+CGG | + | chr3_4:1579583-1579602 | None:intergenic | 40.0% | |
| !!! | TTGGTTTTTTGGTGTCTACG+AGG | + | chr3_4:1579608-1579627 | None:intergenic | 40.0% |
| ! | AAAGAAGGTTGGTTCCTTTG+AGG | - | chr3_4:1579817-1579836 | Msa0484250:intron | 40.0% |
| ! | AAGAAGGTTGGTTCCTTTGA+GGG | - | chr3_4:1579818-1579837 | Msa0484250:intron | 40.0% |
| GGAACCTTATCAAGAACCAA+AGG | + | chr3_4:1579900-1579919 | None:intergenic | 40.0% | |
| GACTCTGCTGCTAAGAAAAT+TGG | - | chr3_4:1580062-1580081 | Msa0484250:intron | 40.0% | |
| TCTGCTGCTAAGAAAATTGG+AGG | - | chr3_4:1580065-1580084 | Msa0484250:intron | 40.0% | |
| CAAACACACGTAGTTACGTT+TGG | - | chr3_4:1580225-1580244 | Msa0484250:intron | 40.0% | |
| TGTCTGACACCAATATGTGT+CGG | + | chr3_4:1580322-1580341 | None:intergenic | 40.0% | |
| CACTGACATGTAGATACCAA+AGG | + | chr3_4:1580361-1580380 | None:intergenic | 40.0% | |
| CTACATGTCAGTGTCATATC+CGG | - | chr3_4:1580368-1580387 | Msa0484250:intron | 40.0% | |
| !! | CAAGCACATGTGGTTACTTT+TGG | - | chr3_4:1580470-1580489 | Msa0484250:intron | 40.0% |
| AGCAACACAGATGCATATAC+CGG | + | chr3_4:1580518-1580537 | None:intergenic | 40.0% | |
| ! | CACCAACTTAAGAGCCATTT+TGG | + | chr3_4:1581177-1581196 | None:intergenic | 40.0% |
| !! | TTTTGTTTACCTGGGAAGAG+AGG | - | chr3_4:1581409-1581428 | Msa0484250:intron | 40.0% |
| TTTGTTTACCTGGGAAGAGA+GGG | - | chr3_4:1581410-1581429 | Msa0484250:intron | 40.0% | |
| TCAGTCATTGCTCATAGACA+TGG | + | chr3_4:1581489-1581508 | None:intergenic | 40.0% | |
| AGATTACTCAACATCAACGG+TGG | + | chr3_4:1581607-1581626 | None:intergenic | 40.0% | |
| ! | TGATAGAAGTGTAGGAGGAA+AGG | - | chr3_4:1581694-1581713 | Msa0484250:intron | 40.0% |
| ! | GATAGAAGTGTAGGAGGAAA+GGG | - | chr3_4:1581695-1581714 | Msa0484250:intron | 40.0% |
| AGAGTTTCTCACGAGAAGAT+GGG | + | chr3_4:1582036-1582055 | None:intergenic | 40.0% | |
| CAACGATGAATTTCCAGTGA+GGG | + | chr3_4:1582187-1582206 | None:intergenic | 40.0% | |
| ACAACGATGAATTTCCAGTG+AGG | + | chr3_4:1582188-1582207 | None:intergenic | 40.0% | |
| AGGATACCAACAGCTAACTA+AGG | + | chr3_4:1582506-1582525 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | - | chr3_4:1582547-1582566 | Msa0484250:intron | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | - | chr3_4:1582551-1582570 | Msa0484250:intron | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | - | chr3_4:1582552-1582571 | Msa0484250:intron | 40.0% | |
| TTGTACAGCATAGTGCATCA+AGG | + | chr3_4:1582582-1582601 | None:intergenic | 40.0% | |
| !! | CAAGAGTGCTTTAATTGCTC+GGG | + | chr3_4:1582615-1582634 | None:intergenic | 40.0% |
| GAGGTAGATAAGCCAAGTAT+TGG | + | chr3_4:1582686-1582705 | None:intergenic | 40.0% | |
| TCGGTCCACAAAAGAATAAG+AGG | + | chr3_4:1582705-1582724 | None:intergenic | 40.0% | |
| TCATTTGCTCTGTCTTAGGA+TGG | - | chr3_4:1582741-1582760 | Msa0484250:intron | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | + | chr3_4:1582774-1582793 | None:intergenic | 40.0% | |
| !! | TGCTGATTAAAGGTGCTGAT+CGG | - | chr3_4:1582820-1582839 | Msa0484250:intron | 40.0% |
| ACAAACATTCATCATGACCC+TGG | - | chr3_4:1582922-1582941 | Msa0484250:intron | 40.0% | |
| ! | TTATCGATGTCAAAGTGCCA+GGG | + | chr3_4:1582942-1582961 | None:intergenic | 40.0% |
| ! | ATTATCGATGTCAAAGTGCC+AGG | + | chr3_4:1582943-1582962 | None:intergenic | 40.0% |
| CAACATGACACCAATACATG+AGG | + | chr3_4:1583132-1583151 | None:intergenic | 40.0% | |
| !! | CTCATGTATTGGTGTCATGT+TGG | - | chr3_4:1583130-1583149 | Msa0484250:intron | 40.0% |
| TCGAGATTCTCCCTTTAAAC+AGG | - | chr3_4:1583272-1583291 | Msa0484250:intron | 40.0% | |
| CGAGATTCTCCCTTTAAACA+GGG | - | chr3_4:1583273-1583292 | Msa0484250:intron | 40.0% | |
| GAAAGACGTCCCTGTTTAAA+GGG | + | chr3_4:1583285-1583304 | None:intergenic | 40.0% | |
| ! | ATCTCTTGTTTGTCTCAGGA+TGG | - | chr3_4:1583784-1583803 | Msa0484250:CDS | 40.0% |
| TTTGACCAGAGTAAAGGCAA+AGG | + | chr3_4:1583825-1583844 | None:intergenic | 40.0% | |
| ACTTGATTAACTCGTCTCTC+GGG | + | chr3_4:1583904-1583923 | None:intergenic | 40.0% | |
| ! | TTTTCTTATCCACTTCCGTC+GGG | + | chr3_4:1583953-1583972 | None:intergenic | 40.0% |
| TTTGAAGATCTGGACCAACA+AGG | - | chr3_4:1583982-1584001 | Msa0484250:CDS | 40.0% | |
| GCTATTCTTCACTTCCTTGT+TGG | + | chr3_4:1583999-1584018 | None:intergenic | 40.0% | |
| ! | AGCCATTGCTGAGTTTTTCA+TGG | - | chr3_4:1584016-1584035 | Msa0484250:CDS | 40.0% |
| TGCCATGAAAAACTCAGCAA+TGG | + | chr3_4:1584021-1584040 | None:intergenic | 40.0% | |
| ! | ATTGCTGAGTTTTTCATGGC+AGG | - | chr3_4:1584020-1584039 | Msa0484250:CDS | 40.0% |
| GGGGTTGAGGATTATGAACA+AGG | + | chr3_4:1579353-1579372 | None:intergenic | 45.0% | |
| !! | AAGAAGAGTGTTTGGGGTTG+AGG | + | chr3_4:1579366-1579385 | None:intergenic | 45.0% |
| !! | GGAGAGAAGAAGAGTGTTTG+GGG | + | chr3_4:1579372-1579391 | None:intergenic | 45.0% |
| !! | GGGAGAGAAGAAGAGTGTTT+GGG | + | chr3_4:1579373-1579392 | None:intergenic | 45.0% |
| !! | AGGGAGAGAAGAAGAGTGTT+TGG | + | chr3_4:1579374-1579393 | None:intergenic | 45.0% |
| CGTTGTCGTTGTTGTCATGT+TGG | + | chr3_4:1579503-1579522 | None:intergenic | 45.0% | |
| TGTCGGATGTTGGAAAAACG+GGG | + | chr3_4:1579581-1579600 | None:intergenic | 45.0% | |
| ! | GTTGGTTCCTTTGAGGGATA+TGG | - | chr3_4:1579824-1579843 | Msa0484250:intron | 45.0% |
| !! | GACGCCTTTGGTTCTTGATA+AGG | - | chr3_4:1579893-1579912 | Msa0484250:intron | 45.0% |
| !! | TAGATGGGTTGAGTGAAGAG+AGG | - | chr3_4:1579958-1579977 | Msa0484250:intron | 45.0% |
| !! | AGATGGGTTGAGTGAAGAGA+GGG | - | chr3_4:1579959-1579978 | Msa0484250:intron | 45.0% |
| !! | AATCCTAGGTGGGCTGTTTA+TGG | - | chr3_4:1579993-1580012 | Msa0484250:intron | 45.0% |
| !! | ATCCTAGGTGGGCTGTTTAT+GGG | - | chr3_4:1579994-1580013 | Msa0484250:intron | 45.0% |
| TGTTTATGGGAAAGGGTTGG+AGG | - | chr3_4:1580007-1580026 | Msa0484250:intron | 45.0% | |
| GAAAGGGTTGGAGGATGTTA+AGG | - | chr3_4:1580016-1580035 | Msa0484250:intron | 45.0% | |
| ! | CTCTAGATTGAAAGCGTGTC+AGG | - | chr3_4:1580174-1580193 | Msa0484250:intron | 45.0% |
| AGCAACACAGACACATGCAT+CGG | + | chr3_4:1580273-1580292 | None:intergenic | 45.0% | |
| ATACTTGGCAGGCACATGAA+CGG | + | chr3_4:1580438-1580457 | None:intergenic | 45.0% | |
| GTCTGACACAAATACTTGGC+AGG | + | chr3_4:1580449-1580468 | None:intergenic | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | + | chr3_4:1580858-1580877 | None:intergenic | 45.0% | |
| TGGGTGCTTAGATATAGGGA+CGG | + | chr3_4:1580862-1580881 | None:intergenic | 45.0% | |
| AGCAATGGGTGCCTACATTA+AGG | - | chr3_4:1581103-1581122 | Msa0484250:intron | 45.0% | |
| GCAATGGGTGCCTACATTAA+GGG | - | chr3_4:1581104-1581123 | Msa0484250:intron | 45.0% | |
| ATTCATTGGCGGTTGAGTTC+AGG | - | chr3_4:1581276-1581295 | Msa0484250:intron | 45.0% | |
| GAAGTAGCAACTGTCAAGTC+TGG | + | chr3_4:1581456-1581475 | None:intergenic | 45.0% | |
| !! | TCTCACGAGAAGATGGGTTA+TGG | + | chr3_4:1582030-1582049 | None:intergenic | 45.0% |
| CAGAGTTTCTCACGAGAAGA+TGG | + | chr3_4:1582037-1582056 | None:intergenic | 45.0% | |
| GATGAATTTCCAGTGAGGGA+AGG | + | chr3_4:1582183-1582202 | None:intergenic | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | - | chr3_4:1582553-1582572 | Msa0484250:intron | 45.0% | |
| TACAGCATAGTGCATCAAGG+TGG | + | chr3_4:1582579-1582598 | None:intergenic | 45.0% | |
| GACTCAGAGACCTGATATAG+TGG | - | chr3_4:1582791-1582810 | Msa0484250:intron | 45.0% | |
| AGCAGAAGCTCCACTATATC+AGG | + | chr3_4:1582804-1582823 | None:intergenic | 45.0% | |
| ! | GTGGAGCTTCTGCTGATTAA+AGG | - | chr3_4:1582810-1582829 | Msa0484250:intron | 45.0% |
| GGAAAGACGTCCCTGTTTAA+AGG | + | chr3_4:1583286-1583305 | None:intergenic | 45.0% | |
| CTAGTCAGTAGTCCTATGCT+TGG | - | chr3_4:1583417-1583436 | Msa0484250:CDS | 45.0% | |
| GTTGGCTAATCGACGCATAA+CGG | + | chr3_4:1583487-1583506 | None:intergenic | 45.0% | |
| !!! | ACATTTTTATTTTAAAAAAA+TGG | + | chr3_4:1584183-1584202 | None:intergenic | 5.0% |
| TTGTGGAGGTTGCGGTTTGT+GGG | + | chr3_4:1579462-1579481 | None:intergenic | 50.0% | |
| TTTGTGGAGGTTGCGGTTTG+TGG | + | chr3_4:1579463-1579482 | None:intergenic | 50.0% | |
| ACGAGGTTGTTGTCGGATGT+TGG | + | chr3_4:1579591-1579610 | None:intergenic | 50.0% | |
| GGTGTCTACGAGGTTGTTGT+CGG | + | chr3_4:1579598-1579617 | None:intergenic | 50.0% | |
| GTTGAGTGAAGAGAGGGTAG+AGG | - | chr3_4:1579965-1579984 | Msa0484250:intron | 50.0% | |
| TAGAGGCTAGGAATCCTAGG+TGG | - | chr3_4:1579982-1580001 | Msa0484250:intron | 50.0% | |
| AGAGGCTAGGAATCCTAGGT+GGG | - | chr3_4:1579983-1580002 | Msa0484250:intron | 50.0% | |
| TTCCCATAAACAGCCCACCT+AGG | + | chr3_4:1579999-1580018 | None:intergenic | 50.0% | |
| !! | AGGTGGGCTGTTTATGGGAA+AGG | - | chr3_4:1579999-1580018 | Msa0484250:intron | 50.0% |
| !! | GGTGGGCTGTTTATGGGAAA+GGG | - | chr3_4:1580000-1580019 | Msa0484250:intron | 50.0% |
| GGCTGTTTATGGGAAAGGGT+TGG | - | chr3_4:1580004-1580023 | Msa0484250:intron | 50.0% | |
| GTCTAACACCATCACGTGTC+AGG | + | chr3_4:1580204-1580223 | None:intergenic | 50.0% | |
| GTTGGGTGTCCGACACATAT+TGG | - | chr3_4:1580310-1580329 | Msa0484250:intron | 50.0% | |
| GTGTCAGACACAAGCACATG+TGG | - | chr3_4:1580460-1580479 | Msa0484250:intron | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | + | chr3_4:1580859-1580878 | None:intergenic | 50.0% | |
| TGGGTGCCTACATTAAGGGA+CGG | - | chr3_4:1581108-1581127 | Msa0484250:intron | 50.0% | |
| TGCCTACATTAAGGGACGGA+GGG | - | chr3_4:1581112-1581131 | Msa0484250:intron | 50.0% | |
| !! | TGGTGCTGCTTCACAACCTT+TGG | - | chr3_4:1581192-1581211 | Msa0484250:intron | 50.0% |
| CAACAAATCCCTCTCTTCCC+AGG | + | chr3_4:1581421-1581440 | None:intergenic | 50.0% | |
| ! | CTCGCAGCAAAAGTGTGCAA+AGG | + | chr3_4:1581808-1581827 | None:intergenic | 50.0% |
| ! | TTGCACACTTTTGCTGCGAG+TGG | - | chr3_4:1581808-1581827 | Msa0484250:intron | 50.0% |
| TTGCTCTGTCTTAGGATGGC+TGG | - | chr3_4:1582745-1582764 | Msa0484250:intron | 50.0% | |
| TGTCAGTGTCAGTGCTTCGT+AGG | + | chr3_4:1583045-1583064 | None:intergenic | 50.0% | |
| TGCTAGGTGAGGACTGATGT+TGG | + | chr3_4:1583505-1583524 | None:intergenic | 50.0% | |
| ! | CTTGTCACTTCTGCTAGGTG+AGG | + | chr3_4:1583516-1583535 | None:intergenic | 50.0% |
| CTCACCTAGCAGAAGTGACA+AGG | - | chr3_4:1583514-1583533 | Msa0484250:CDS | 50.0% | |
| ! | CAAGCCTTGTCACTTCTGCT+AGG | + | chr3_4:1583521-1583540 | None:intergenic | 50.0% |
| GAGTAAAGGCAAAGGTCGAG+TGG | + | chr3_4:1583817-1583836 | None:intergenic | 50.0% | |
| CTCGACCTTTGCCTTTACTC+TGG | - | chr3_4:1583817-1583836 | Msa0484250:CDS | 50.0% | |
| GCAAGCAGCTCTTCAGCATA+TGG | - | chr3_4:1584045-1584064 | Msa0484250:CDS | 50.0% | |
| AGATTGAAACACGCGGGGTG+TGG | + | chr3_4:1579421-1579440 | None:intergenic | 55.0% | |
| TGTGGAGGTTGCGGTTTGTG+GGG | + | chr3_4:1579461-1579480 | None:intergenic | 55.0% | |
| ! | ATTGGCTCAGCTGACGCCTT+TGG | - | chr3_4:1579881-1579900 | Msa0484250:intron | 55.0% |
| GTGAAGAGAGGGTAGAGGCT+AGG | - | chr3_4:1579970-1579989 | Msa0484250:intron | 55.0% | |
| GGGTAGAGGCTAGGAATCCT+AGG | - | chr3_4:1579979-1579998 | Msa0484250:intron | 55.0% | |
| GTGCCTACATTAAGGGACGG+AGG | - | chr3_4:1581111-1581130 | Msa0484250:intron | 55.0% | |
| CTCCCTCCGTCCCTTAATGT+AGG | + | chr3_4:1581117-1581136 | None:intergenic | 55.0% | |
| TGTGCTCTTCCTTCCCTCAC+TGG | - | chr3_4:1582171-1582190 | Msa0484250:intron | 55.0% | |
| CTCTCGGGCGCGTCTATATA+AGG | + | chr3_4:1583889-1583908 | None:intergenic | 55.0% | |
| CCTTATATAGACGCGCCCGA+CGG | - | chr3_4:1583886-1583905 | Msa0484250:CDS | 55.0% | |
| CGGTTTGTGGGGGGTTTGAG+AGG | + | chr3_4:1579450-1579469 | None:intergenic | 60.0% | |
| TGGAGGTTGCGGTTTGTGGG+GGG | + | chr3_4:1579459-1579478 | None:intergenic | 60.0% | |
| GTGGAGGTTGCGGTTTGTGG+GGG | + | chr3_4:1579460-1579479 | None:intergenic | 60.0% | |
| CAGGTGCACCTGACACGTGA+TGG | - | chr3_4:1580193-1580212 | Msa0484250:intron | 60.0% | |
| CCGTCGGGCGCGTCTATATA+AGG | + | chr3_4:1583938-1583957 | None:intergenic | 60.0% | |
| ATAGACGCGCCCGACGGAAG+TGG | - | chr3_4:1583941-1583960 | Msa0484250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 1579275 | 1584223 | 1579275 | ID=Msa0484250;Name=Msa0484250 |
| chr3_4 | mRNA | 1579275 | 1584223 | 1579275 | ID=Msa0484250-mRNA-1;Parent=Msa0484250;Name=Msa0484250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=25|1|1|1|1|1|7|206|492 |
| chr3_4 | exon | 1579275 | 1579696 | 1579275 | ID=Msa0484250-mRNA-1:exon:426;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1580641 | 1580739 | 1580641 | ID=Msa0484250-mRNA-1:exon:425;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1580831 | 1580929 | 1580831 | ID=Msa0484250-mRNA-1:exon:424;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1581419 | 1581517 | 1581419 | ID=Msa0484250-mRNA-1:exon:423;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1581604 | 1581705 | 1581604 | ID=Msa0484250-mRNA-1:exon:422;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1582022 | 1582098 | 1582022 | ID=Msa0484250-mRNA-1:exon:421;Parent=Msa0484250-mRNA-1 |
| chr3_4 | exon | 1583412 | 1584223 | 1583412 | ID=Msa0484250-mRNA-1:exon:420;Parent=Msa0484250-mRNA-1 |
| chr3_4 | five_prime_UTR | 1584199 | 1584223 | 1584199 | ID=Msa0484250-mRNA-1:five_prime_utr;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1583412 | 1584198 | 1583412 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1582022 | 1582098 | 1582022 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1581604 | 1581705 | 1581604 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1581419 | 1581517 | 1581419 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1580831 | 1580929 | 1580831 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1580641 | 1580739 | 1580641 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | CDS | 1579481 | 1579696 | 1579481 | ID=Msa0484250-mRNA-1:cds;Parent=Msa0484250-mRNA-1 |
| chr3_4 | three_prime_UTR | 1579275 | 1579480 | 1579275 | ID=Msa0484250-mRNA-1:three_prime_utr;Parent=Msa0484250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
