AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0184850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184850 MtrunA17_Chr1g0202861 98.095 315 6 0 1 315 42 356 0.0 643
Msa0184850 MtrunA17_Chr1g0202871 83.175 315 53 0 1 315 1 315 0.0 558
Msa0184850 MtrunA17_Chr1g0202931 80.317 315 62 0 1 315 1 315 0.0 533
Msa0184850 MtrunA17_Chr1g0202891 80.317 315 62 0 1 315 1 315 0.0 531
Msa0184850 MtrunA17_Chr8g0386971 69.524 315 96 0 1 315 1 315 1.14e-165 463
Msa0184850 MtrunA17_Chr6g0470501 69.707 307 90 1 10 313 37 343 1.04e-158 446
Msa0184850 MtrunA17_Chr6g0470321 69.055 307 92 1 10 313 18 324 6.91e-156 439
Msa0184850 MtrunA17_Chr1g0182541 58.361 305 127 0 8 312 13 317 1.37e-130 374
Msa0184850 MtrunA17_Chr7g0262941 58.497 306 126 1 8 312 13 318 3.40e-129 371
Msa0184850 MtrunA17_Chr4g0058731 43.910 312 171 2 8 315 24 335 1.30e-83 256
Msa0184850 MtrunA17_Chr8g0388831 43.607 305 168 3 8 308 13 317 2.52e-81 249
Msa0184850 MtrunA17_Chr3g0117241 49.296 142 69 1 8 146 13 154 6.14e-41 140
Msa0184850 MtrunA17_Chr3g0117251 38.235 170 104 1 147 315 1 170 2.64e-36 129
Msa0184850 MtrunA17_Chr1g0202911 75.676 74 18 0 33 106 4 77 7.01e-32 114
Msa0184850 MtrunA17_Chr6g0481311 35.938 256 146 8 30 275 62 309 4.16e-28 112
Msa0184850 MtrunA17_Chr6g0466681 28.947 266 167 9 25 285 62 310 1.67e-20 90.5
Msa0184850 MtrunA17_Chr2g0317921 29.073 313 187 10 31 312 88 396 2.46e-20 90.5
Msa0184850 MtrunA17_Chr6g0469251 30.233 301 172 12 37 312 14 301 3.31e-16 77.8
Msa0184850 MtrunA17_Chr3g0079561 30.739 257 142 10 80 312 13 257 9.58e-15 73.2
Msa0184850 MtrunA17_Chr3g0131521 27.740 292 150 12 32 285 37 305 6.49e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0184850 AT4G23430.2 71.154 312 89 1 1 311 1 312 1.88e-166 466
Msa0184850 AT4G23420.1 71.474 312 88 1 1 311 1 312 2.90e-166 465
Msa0184850 AT4G23420.2 71.474 312 88 1 1 311 1 312 2.90e-166 465
Msa0184850 AT4G23430.1 70.833 312 88 2 1 311 1 310 1.03e-163 459
Msa0184850 AT4G23420.3 70.645 310 90 1 3 311 20 329 1.92e-162 456
Msa0184850 AT4G11410.1 67.619 315 102 0 1 315 1 315 1.20e-159 448
Msa0184850 AT4G23430.4 68.590 312 87 2 1 311 1 302 1.17e-156 441
Msa0184850 AT4G23430.3 68.269 312 86 3 1 311 1 300 5.45e-154 434
Msa0184850 AT4G23420.5 71.756 262 73 1 1 261 1 262 6.85e-138 391
Msa0184850 AT4G23420.4 76.050 238 57 0 1 238 1 238 2.20e-134 382
Msa0184850 AT4G11410.2 71.020 245 71 0 1 245 1 245 1.76e-126 362
Msa0184850 AT5G02540.1 59.283 307 125 0 6 312 10 316 9.30e-125 360
Msa0184850 AT2G37540.1 56.026 307 135 0 6 312 10 316 2.65e-124 359
Msa0184850 AT2G37540.2 59.322 236 96 0 6 241 10 245 9.06e-100 294
Msa0184850 AT4G24050.1 44.551 312 166 4 8 314 13 322 7.21e-84 256
Msa0184850 AT5G50130.1 45.631 309 164 3 8 312 13 321 1.69e-83 256
Msa0184850 AT5G50130.8 44.840 281 154 1 33 312 7 287 4.76e-77 238
Msa0184850 AT5G50130.7 45.035 282 153 2 33 312 7 288 2.12e-76 236
Msa0184850 AT1G64590.1 43.813 299 165 2 17 312 22 320 1.89e-71 224
Msa0184850 AT5G50130.2 44.906 265 142 2 8 268 13 277 9.03e-70 220
Msa0184850 AT5G50130.4 45.113 266 141 3 8 268 13 278 3.82e-69 218
Msa0184850 AT5G50130.9 48.291 234 119 1 8 239 13 246 2.74e-68 214
Msa0184850 AT5G50130.3 48.511 235 118 2 8 239 13 247 1.04e-67 213
Msa0184850 AT4G24050.2 42.803 264 146 3 8 268 13 274 4.11e-67 211
Msa0184850 AT5G50130.6 44.304 237 130 1 34 268 8 244 1.30e-62 200
Msa0184850 AT5G50130.5 44.538 238 129 2 34 268 8 245 4.73e-62 199
Msa0184850 AT4G27760.1 31.046 306 176 9 30 312 58 351 9.48e-31 119
Msa0184850 AT5G53090.1 32.226 301 179 8 30 312 57 350 1.16e-28 114
Msa0184850 AT5G53100.1 31.148 305 180 9 30 312 45 341 2.46e-27 110
Msa0184850 AT5G54190.1 28.296 311 188 10 33 312 96 402 7.93e-25 103
Msa0184850 AT1G03630.1 31.090 312 181 12 31 312 91 398 1.70e-24 102
Msa0184850 AT1G03630.2 31.090 312 181 12 31 312 89 396 1.73e-24 102
Msa0184850 AT5G04070.1 28.378 296 184 7 32 308 61 347 3.73e-23 98.6
Msa0184850 AT4G09750.1 28.014 282 189 6 4 285 20 287 3.44e-22 95.1
Msa0184850 AT4G27440.2 29.260 311 185 10 33 312 92 398 7.81e-22 95.1
Msa0184850 AT4G27440.1 29.260 311 185 10 33 312 92 398 7.81e-22 95.1
Msa0184850 AT5G15940.3 27.575 301 188 12 32 311 63 354 1.91e-19 88.2
Msa0184850 AT5G15940.2 27.575 301 188 12 32 311 63 354 1.91e-19 88.2
Msa0184850 AT5G15940.1 27.575 301 188 12 32 311 62 353 1.97e-19 88.2
Msa0184850 AT5G54190.2 25.614 285 178 9 58 312 1 281 1.69e-17 81.6
Msa0184850 AT5G15940.4 28.251 223 141 7 32 240 63 280 1.21e-15 76.6
Msa0184850 AT5G61830.1 26.482 253 143 9 32 269 39 263 2.83e-11 63.9
Msa0184850 AT5G61830.2 26.482 253 143 9 32 269 39 263 2.83e-11 63.9

Find 86 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGTTCAATGTTGTCTT+TGG 0.213224 1_4:-74480279 None:intergenic
GCGCGGTGTTCATGTGATTA+TGG 0.226178 1_4:+74479852 Msa0184850:CDS
TTCAGCAAGAAAGGTGTTTC+TGG 0.229466 1_4:+74478615 Msa0184850:CDS
GGTCTCACTGCCATTGTTAC+TGG 0.236378 1_4:+74478690 Msa0184850:CDS
AAGAAATAATGCAGGAATTA+TGG 0.267594 1_4:+74480238 Msa0184850:intron
CGCGGTGTTCATGTGATTAT+GGG 0.273076 1_4:+74479853 Msa0184850:CDS
CTGAGCTTATAGTTAATGTT+TGG 0.274240 1_4:+74483301 Msa0184850:three_prime_UTR
CTGGGATTTCAGCATCAATT+TGG 0.274620 1_4:+74483015 Msa0184850:CDS
GCATCTGAGTATAATTCTTC+TGG 0.288049 1_4:+74479994 Msa0184850:CDS
TGAGCTTATAGTTAATGTTT+GGG 0.320031 1_4:+74483302 Msa0184850:three_prime_UTR
ACATGGAAGGGACGCTGATT+TGG 0.331121 1_4:+74482982 Msa0184850:CDS
CACTAACTCCCTTCACTTGT+GGG 0.347652 1_4:-74482919 None:intergenic
GGAGTTAGATCTTAGCTCAT+TGG 0.400097 1_4:+74479954 Msa0184850:CDS
CCACTAACTCCCTTCACTTG+TGG 0.412556 1_4:-74482920 None:intergenic
CTGATTTGGCAAAGAAACTC+TGG 0.413553 1_4:+74482996 Msa0184850:CDS
TTACCACATACCTATGTGAT+TGG 0.416556 1_4:-74480309 None:intergenic
TACAGCAGATGGGGTGCATA+TGG 0.428773 1_4:+74480801 Msa0184850:CDS
CTCCATCATGATCAGGAAGA+TGG 0.437998 1_4:+74481581 Msa0184850:intron
CTGCCGTGTGTCACAAAAGC+AGG 0.443388 1_4:-74478562 None:intergenic
AGATTGGTGACAATTGTTCC+TGG 0.444579 1_4:-74481632 None:intergenic
CCACAAGTGAAGGGAGTTAG+TGG 0.447541 1_4:+74482920 Msa0184850:CDS
CACATTAAATAAAACTAGTA+AGG 0.454137 1_4:-74483247 None:intergenic
ACAGGAGCATCCAGCGGCAT+TGG 0.459677 1_4:+74479802 Msa0184850:intron
GAAACACCTTTCTTGCTGAA+TGG 0.471111 1_4:-74478612 None:intergenic
AGTCTCAGCGCCAATGCCGC+TGG 0.474761 1_4:-74479812 None:intergenic
GAATTTATGTGTATGAATGT+AGG 0.479989 1_4:-74483279 None:intergenic
CTTTATACAGTTACAGCAGA+TGG 0.483123 1_4:+74480790 Msa0184850:intron
AAATCTTTGATAATGACATA+TGG 0.484963 1_4:+74483174 Msa0184850:three_prime_UTR
CTCTGCTAAACTTGATGCCA+TGG 0.490137 1_4:+74479933 Msa0184850:CDS
ATAAAATCAATGACGAATCA+AGG 0.490214 1_4:+74480669 Msa0184850:CDS
CAGGTCTAATAAATGTGGTT+GGG 0.491530 1_4:+74482122 Msa0184850:intron
TCCATCATGATCAGGAAGAT+GGG 0.501810 1_4:+74481582 Msa0184850:intron
AATTTATGTGTATGAATGTA+GGG 0.504808 1_4:-74483278 None:intergenic
TTTATACAGTTACAGCAGAT+GGG 0.509343 1_4:+74480791 Msa0184850:intron
GCAGGTCTAATAAATGTGGT+TGG 0.514107 1_4:+74482121 Msa0184850:intron
CCACATACCTATGTGATTGG+TGG 0.516243 1_4:-74480306 None:intergenic
ATGTGGCCATTCAGCAAGAA+AGG 0.533159 1_4:+74478606 Msa0184850:CDS
TTGTCTTTGGACAAACTGAA+AGG 0.538568 1_4:-74480266 None:intergenic
GTAATTGTAAGAAATAATGC+AGG 0.539047 1_4:+74480230 Msa0184850:intron
ACTGCAATTGCAATATATCT+CGG 0.539733 1_4:+74478536 Msa0184850:five_prime_UTR
CTGCAATTGCAATATATCTC+GGG 0.542693 1_4:+74478537 Msa0184850:five_prime_UTR
TGATTTGGCAAAGAAACTCT+GGG 0.543852 1_4:+74482997 Msa0184850:CDS
ATGTCGCCTCAGAGGCTCAC+AGG 0.545694 1_4:+74480618 Msa0184850:CDS
ACTGCAAATTCTCTTCATCC+AGG 0.546611 1_4:+74481614 Msa0184850:CDS
CGTTCACTGCACTGTTATGT+CGG 0.547282 1_4:-74481658 None:intergenic
AGCATTGCACCCACAAGTGA+AGG 0.549189 1_4:+74482910 Msa0184850:CDS
TGTCTTTGGACAAACTGAAA+GGG 0.554943 1_4:-74480265 None:intergenic
AATCAGCGTCCCTTCCATGT+GGG 0.555356 1_4:-74482979 None:intergenic
CAGTTTGCCACCAATCACAT+AGG 0.557845 1_4:+74480299 Msa0184850:CDS
ACACATGGAATCGATGCTAC+TGG 0.558914 1_4:+74478669 Msa0184850:CDS
ACTGTTATGTCGGAAAAGAT+TGG 0.564967 1_4:-74481648 None:intergenic
GAGCTTATAGTTAATGTTTG+GGG 0.570044 1_4:+74483303 Msa0184850:three_prime_UTR
ACACGCAAAAGTAAGAAAGA+AGG 0.580402 1_4:+74480584 Msa0184850:CDS
CAAAACAACCCCACATGGAA+GGG 0.582561 1_4:+74482970 Msa0184850:CDS
ACAAAACAACCCCACATGGA+AGG 0.586260 1_4:+74482969 Msa0184850:CDS
AGAGACTGATACGCAATATG+TGG 0.588960 1_4:+74478589 Msa0184850:exon
TGTCAAAGAAACAATACTCA+AGG 0.594611 1_4:+74479903 Msa0184850:CDS
CACAGGTTCGCATATTCTGA+AGG 0.595062 1_4:+74480635 Msa0184850:CDS
ATCAGCGTCCCTTCCATGTG+GGG 0.601486 1_4:-74482978 None:intergenic
AAATCAGCGTCCCTTCCATG+TGG 0.606536 1_4:-74482980 None:intergenic
TAGTAAGGATCCTATGCAGA+GGG 0.607534 1_4:-74483232 None:intergenic
CCAACTTACAAAACACCTCA+AGG 0.609448 1_4:+74480857 Msa0184850:CDS
TCATGATCAGGAAGATGGGG+TGG 0.613846 1_4:+74481586 Msa0184850:intron
TCTTTGATAATGACATATGG+TGG 0.614329 1_4:+74483177 Msa0184850:three_prime_UTR
TCTTACATCAAGATGTTCAG+CGG 0.618040 1_4:-74480021 None:intergenic
TTATACAGTTACAGCAGATG+GGG 0.618136 1_4:+74480792 Msa0184850:intron
TAGCATTGACGAGTAACACT+TGG 0.618614 1_4:-74483057 None:intergenic
GCATTGCACCCACAAGTGAA+GGG 0.624705 1_4:+74482911 Msa0184850:CDS
TGCGAACCTGTGAGCCTCTG+AGG 0.625555 1_4:-74480624 None:intergenic
TGCCGTGTGTCACAAAAGCA+GGG 0.627037 1_4:-74478561 None:intergenic
CCATCATGATCAGGAAGATG+GGG 0.633051 1_4:+74481583 Msa0184850:intron
ACTCGTGTCCTTGCTTTGCG+CGG 0.635714 1_4:+74479835 Msa0184850:CDS
GTGTACAAAACAACCCCACA+TGG 0.637066 1_4:+74482965 Msa0184850:CDS
TTATGCAGGTCTAATAAATG+TGG 0.639665 1_4:+74482117 Msa0184850:intron
CTAGTAAGGATCCTATGCAG+AGG 0.640026 1_4:-74483233 None:intergenic
TGAGCTAAGATCTAACTCCA+TGG 0.641141 1_4:-74479950 None:intergenic
CGACATAACAGTGCAGTGAA+CGG 0.644050 1_4:+74481659 Msa0184850:CDS
CATGAACACCGCGCAAAGCA+AGG 0.649556 1_4:-74479843 None:intergenic
AATTGTTAATGTCGCCTCAG+AGG 0.651795 1_4:+74480610 Msa0184850:CDS
ATGGCATCAAGTTTAGCAGA+GGG 0.654356 1_4:-74479931 None:intergenic
TATGGACCAACCAGTAACAA+TGG 0.654679 1_4:-74478700 None:intergenic
GATTATGGGTGTGAGAAACA+TGG 0.655252 1_4:+74479867 Msa0184850:CDS
ACTGCTGAACAAGTTACACA+TGG 0.658849 1_4:+74478654 Msa0184850:CDS
ATAGATAGATAAATGTGACA+AGG 0.675679 1_4:-74483143 None:intergenic
CATGGCATCAAGTTTAGCAG+AGG 0.683203 1_4:-74479932 None:intergenic
GTGATAACAGGAGCATCCAG+CGG 0.698671 1_4:+74479796 Msa0184850:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTTTATGAATATATTAT+AGG - chr1_4:74478991-74479010 None:intergenic 10.0%
!!! AATAAAAAAACCAATTTTAA+AGG - chr1_4:74482037-74482056 None:intergenic 10.0%
!! TTAAATATTATTTAACCTAT+AGG + chr1_4:74482783-74482802 Msa0184850:intron 10.0%
!!! CTTATTTTATTAAGTTCTTT+AGG + chr1_4:74479016-74479035 Msa0184850:intron 15.0%
!! GTATGCATAAAAAATTATTA+AGG - chr1_4:74479103-74479122 None:intergenic 15.0%
!!! TATATTTTTTATGCAATTTC+TGG - chr1_4:74479152-74479171 None:intergenic 15.0%
!! AAAAAAAAAATTCAGTTGAT+TGG - chr1_4:74480365-74480384 None:intergenic 15.0%
!! TGATAACTTATATTGAATTA+TGG - chr1_4:74480916-74480935 None:intergenic 15.0%
!! AAAATGATGATAATACAAAT+TGG - chr1_4:74481441-74481460 None:intergenic 15.0%
!! AATATAAACAATATTGTTAG+AGG - chr1_4:74482730-74482749 None:intergenic 15.0%
!! CTAACAATATTGTTTATATT+AGG + chr1_4:74482730-74482749 Msa0184850:intron 15.0%
!! TACTAAAAAAAACTTATACA+AGG - chr1_4:74482812-74482831 None:intergenic 15.0%
!! GAAATAATTAAGAAAGAAAC+AGG - chr1_4:74478733-74478752 None:intergenic 20.0%
!! TTTCTTAATTATTTCCCAAA+AGG + chr1_4:74478738-74478757 Msa0184850:intron 20.0%
!! TTCTTAATTATTTCCCAAAA+GGG + chr1_4:74478739-74478758 Msa0184850:intron 20.0%
!!! TAAAAAGATTTTCGTGTAAA+CGG - chr1_4:74478898-74478917 None:intergenic 20.0%
!!! AATTTTTTATGCATACCTTT+TGG + chr1_4:74479107-74479126 Msa0184850:intron 20.0%
!!! AATGTTACTATTTTATTCTC+CGG + chr1_4:74480331-74480350 Msa0184850:intron 20.0%
!!! TCATCAAATGAATTTTCAAA+AGG - chr1_4:74480390-74480409 None:intergenic 20.0%
!!! ATGAATTATTTTAATTACGC+AGG + chr1_4:74480515-74480534 Msa0184850:intron 20.0%
!! AATTGCTTAAAATGTAATCA+AGG - chr1_4:74480725-74480744 None:intergenic 20.0%
!!! TTGATTACATTTTAAGCAAT+TGG + chr1_4:74480724-74480743 Msa0184850:intron 20.0%
!!! GTTTTGGTTGATTAATAAAA+AGG + chr1_4:74480960-74480979 Msa0184850:intron 20.0%
!! ATTAATTCTGATCATATCTT+TGG + chr1_4:74481403-74481422 Msa0184850:intron 20.0%
!!! TTTTTCATTCTTGACTTTTT+GGG + chr1_4:74481471-74481490 Msa0184850:intron 20.0%
!! ATATCAAAGATAGATTAATG+TGG - chr1_4:74481547-74481566 None:intergenic 20.0%
!! TTATTCATGTAAATTCACTT+TGG + chr1_4:74481696-74481715 Msa0184850:intron 20.0%
!! TATATTCTGTATTTAGTTGT+TGG + chr1_4:74481898-74481917 Msa0184850:intron 20.0%
!! TTTAGTGCTATATATTACAA+TGG - chr1_4:74481987-74482006 None:intergenic 20.0%
!! ACTAATACTTTATCTTTCAT+AGG - chr1_4:74482422-74482441 None:intergenic 20.0%
!!! TACTCCAATTTTATTAATGT+AGG + chr1_4:74482865-74482884 Msa0184850:intron 20.0%
!!! ACTCCAATTTTATTAATGTA+GGG + chr1_4:74482866-74482885 Msa0184850:intron 20.0%
!!! AAATCTTTGATAATGACATA+TGG + chr1_4:74483174-74483193 Msa0184850:three_prime_UTR 20.0%
!! AAAAATATGACAGAAAATAG+AGG - chr1_4:74483212-74483231 None:intergenic 20.0%
!! CACATTAAATAAAACTAGTA+AGG - chr1_4:74483250-74483269 None:intergenic 20.0%
!! AATTTATGTGTATGAATGTA+GGG - chr1_4:74483281-74483300 None:intergenic 20.0%
! TAAAAAGATGATCGTGTAAA+CGG + chr1_4:74478847-74478866 Msa0184850:intron 25.0%
! CAAAATTGTATTCAACCAAA+AGG - chr1_4:74479125-74479144 None:intergenic 25.0%
! AATTGGATAGAGTCAAATAT+GGG - chr1_4:74479268-74479287 None:intergenic 25.0%
! AAATTGGATAGAGTCAAATA+TGG - chr1_4:74479269-74479288 None:intergenic 25.0%
!! TATTCTGAACAATTCGTTTT+TGG + chr1_4:74479411-74479430 Msa0184850:intron 25.0%
!!! ATTCTGAACAATTCGTTTTT+GGG + chr1_4:74479412-74479431 Msa0184850:intron 25.0%
!! TTTTTCTCTTTATATTCTGC+TGG + chr1_4:74479574-74479593 Msa0184850:intron 25.0%
!!! ATCCATAAGGTTTTTGAAAA+TGG + chr1_4:74479599-74479618 Msa0184850:intron 25.0%
!! AACCATTTTCAAAAACCTTA+TGG - chr1_4:74479604-74479623 None:intergenic 25.0%
!! TGTAATTAAGAAAGCACAAT+TGG - chr1_4:74480166-74480185 None:intergenic 25.0%
! GTAATTGTAAGAAATAATGC+AGG + chr1_4:74480230-74480249 Msa0184850:intron 25.0%
! AAGAAATAATGCAGGAATTA+TGG + chr1_4:74480238-74480257 Msa0184850:intron 25.0%
!!! CGTCATTGATTTTATCAAAA+CGG - chr1_4:74480664-74480683 None:intergenic 25.0%
! ATAAAATCAATGACGAATCA+AGG + chr1_4:74480669-74480688 Msa0184850:CDS 25.0%
! TACTTCTACTACATGTTATA+TGG + chr1_4:74480886-74480905 Msa0184850:intron 25.0%
! TTAATAAAAAGGATGTCCTT+AGG + chr1_4:74480971-74480990 Msa0184850:intron 25.0%
!! TTTTATATACTCTACCAAAC+AGG - chr1_4:74481106-74481125 None:intergenic 25.0%
! AATAAGCTGAAAACAACTTA+GGG - chr1_4:74481145-74481164 None:intergenic 25.0%
! AAATAAGCTGAAAACAACTT+AGG - chr1_4:74481146-74481165 None:intergenic 25.0%
! CTTATTTCCATAAACTCTAT+AGG + chr1_4:74481159-74481178 Msa0184850:intron 25.0%
! TGCTTATGAAAACAACTTAT+AGG + chr1_4:74481184-74481203 Msa0184850:intron 25.0%
!!! CTTTTTCATTCTTGACTTTT+TGG + chr1_4:74481470-74481489 Msa0184850:intron 25.0%
! ATGTTGAATATGAATTATGC+AGG + chr1_4:74481720-74481739 Msa0184850:intron 25.0%
! AGAAAATGTACTCTACATAA+TGG - chr1_4:74481796-74481815 None:intergenic 25.0%
!! TCCTTTACAATAACTTTTGA+TGG + chr1_4:74481837-74481856 Msa0184850:intron 25.0%
! TCCATCAAAAGTTATTGTAA+AGG - chr1_4:74481841-74481860 None:intergenic 25.0%
! CTAAAGCAAATAAGAGTTTA+TGG - chr1_4:74481874-74481893 None:intergenic 25.0%
!! CATAAACTCTTATTTGCTTT+AGG + chr1_4:74481872-74481891 Msa0184850:intron 25.0%
!! CAATGTTGTCAAATAGTTTT+TGG + chr1_4:74482214-74482233 Msa0184850:intron 25.0%
! TTATAATGCACGAATAATCT+CGG + chr1_4:74482268-74482287 Msa0184850:intron 25.0%
! TATTGCATTAACTTTGTGTA+CGG + chr1_4:74482291-74482310 Msa0184850:intron 25.0%
! TAACAACATTCTCTCTTATT+GGG + chr1_4:74482324-74482343 Msa0184850:intron 25.0%
!! TCATATAGATCCCATTATTT+TGG + chr1_4:74482353-74482372 Msa0184850:intron 25.0%
!! CATATAGATCCCATTATTTT+GGG + chr1_4:74482354-74482373 Msa0184850:intron 25.0%
! TCATAGGATAAAATTCATGT+AGG - chr1_4:74482406-74482425 None:intergenic 25.0%
! AAAATAGAGAAGCTTCAAAT+TGG + chr1_4:74482500-74482519 Msa0184850:intron 25.0%
! TTATATTAGGAGAAAACATG+TGG + chr1_4:74482743-74482762 Msa0184850:intron 25.0%
! ATAGATAGATAAATGTGACA+AGG - chr1_4:74483146-74483165 None:intergenic 25.0%
! GAATTTATGTGTATGAATGT+AGG - chr1_4:74483282-74483301 None:intergenic 25.0%
ACTGCAATTGCAATATATCT+CGG + chr1_4:74478536-74478555 Msa0184850:five_prime_UTR 30.0%
CTCTGATGTGTAAATTCAAA+CGG + chr1_4:74478820-74478839 Msa0184850:intron 30.0%
GCAAAACTACAAAGTAATAC+AGG - chr1_4:74479181-74479200 None:intergenic 30.0%
! ATCACATAAGCATAGGTTTT+AGG + chr1_4:74479201-74479220 Msa0184850:intron 30.0%
ATTGGATAGAGTCAAATATG+GGG - chr1_4:74479267-74479286 None:intergenic 30.0%
AACACAAAAAAGTGGTATTG+TGG - chr1_4:74479297-74479316 None:intergenic 30.0%
AATAACTTGAGTTTGATTCC+TGG - chr1_4:74479395-74479414 None:intergenic 30.0%
!! TTCTGAACAATTCGTTTTTG+GGG + chr1_4:74479413-74479432 Msa0184850:intron 30.0%
! ATGGTTTGTGAATCTAATTC+TGG + chr1_4:74479618-74479637 Msa0184850:intron 30.0%
! TGGTTTGTGAATCTAATTCT+GGG + chr1_4:74479619-74479638 Msa0184850:intron 30.0%
ATATACAGGGTTTCAAATTG+TGG - chr1_4:74479704-74479723 None:intergenic 30.0%
TATATGGACATTGTGATAAC+AGG + chr1_4:74479784-74479803 Msa0184850:intron 30.0%
TGTCAAAGAAACAATACTCA+AGG + chr1_4:74479903-74479922 Msa0184850:CDS 30.0%
TACAGTATCGTTTAATGCAA+AGG + chr1_4:74480461-74480480 Msa0184850:intron 30.0%
! TCTCTTGACAAATCTTTTGT+TGG + chr1_4:74480544-74480563 Msa0184850:CDS 30.0%
TTTATACAGTTACAGCAGAT+GGG + chr1_4:74480791-74480810 Msa0184850:intron 30.0%
AAGCAATCCTATAGAGTTTA+TGG - chr1_4:74481169-74481188 None:intergenic 30.0%
ATCATATAAGTGCGTATGTA+TGG - chr1_4:74481288-74481307 None:intergenic 30.0%
GTACATAACAAGCAAAGTTA+AGG - chr1_4:74481359-74481378 None:intergenic 30.0%
TGTGAGTAAATATGTCAGTT+TGG + chr1_4:74481516-74481535 Msa0184850:intron 30.0%
AAATGTACTCTACATAATGG+TGG - chr1_4:74481793-74481812 None:intergenic 30.0%
!! TGAGTTTTATGAATGTTAGC+TGG + chr1_4:74482088-74482107 Msa0184850:intron 30.0%
TTATGCAGGTCTAATAAATG+TGG + chr1_4:74482117-74482136 Msa0184850:intron 30.0%
AGTTAAATCAGTATGTCCTA+TGG + chr1_4:74482175-74482194 Msa0184850:intron 30.0%
TCTCTGACATTTATAACCAT+AGG - chr1_4:74482194-74482213 None:intergenic 30.0%
CTAACAACATTCTCTCTTAT+TGG + chr1_4:74482323-74482342 Msa0184850:intron 30.0%
AATTAAAGTGGAAAACGTGA+TGG - chr1_4:74482454-74482473 None:intergenic 30.0%
! TTTCATGATGGAATTGCATT+GGG - chr1_4:74482483-74482502 None:intergenic 30.0%
!! TTTTCATGATGGAATTGCAT+TGG - chr1_4:74482484-74482503 None:intergenic 30.0%
! AAGCTTCTCTATTTTCATGA+TGG - chr1_4:74482495-74482514 None:intergenic 30.0%
! CTTATTCCAATGTTGTTGTT+GGG + chr1_4:74482615-74482634 Msa0184850:intron 30.0%
ACTTATACAAGGAATCCTAT+AGG - chr1_4:74482801-74482820 None:intergenic 30.0%
GCTCCCTACATTAATAAAAT+TGG - chr1_4:74482872-74482891 None:intergenic 30.0%
!! TCTTTGATAATGACATATGG+TGG + chr1_4:74483177-74483196 Msa0184850:three_prime_UTR 30.0%
CTGCAATTGCAATATATCTC+GGG + chr1_4:74478537-74478556 Msa0184850:five_prime_UTR 35.0%
!!! AAGGTGTTTCTGGTTTTTCA+TGG + chr1_4:74478625-74478644 Msa0184850:CDS 35.0%
AAAGAAACAGGAAGAGAGTA+TGG - chr1_4:74478721-74478740 None:intergenic 35.0%
! GTTTTGCATCACATAAGCAT+AGG + chr1_4:74479194-74479213 Msa0184850:intron 35.0%
TTGGATAGAGTCAAATATGG+GGG - chr1_4:74479266-74479285 None:intergenic 35.0%
ACAAAAAAGTGGTATTGTGG+AGG - chr1_4:74479294-74479313 None:intergenic 35.0%
!!! ACTTTTTTGTGTTAACCCTC+CGG + chr1_4:74479304-74479323 Msa0184850:intron 35.0%
CAAACATTCCTTACAAACTC+CGG - chr1_4:74479356-74479375 None:intergenic 35.0%
ATTCCTGGTGAAACAATTCT+TGG - chr1_4:74479380-74479399 None:intergenic 35.0%
!! TATCCCTTTAAAACCACTAG+TGG + chr1_4:74479461-74479480 Msa0184850:intron 35.0%
ATATTTACTACCACCACTAG+TGG - chr1_4:74479477-74479496 None:intergenic 35.0%
TATTCTGCTGGATATCCATA+AGG + chr1_4:74479586-74479605 Msa0184850:intron 35.0%
GATGTGTGACTATTGTAATG+CGG + chr1_4:74479761-74479780 Msa0184850:intron 35.0%
GACTATTGTAATGCGGTATA+TGG + chr1_4:74479768-74479787 Msa0184850:intron 35.0%
GCATCTGAGTATAATTCTTC+TGG + chr1_4:74479994-74480013 Msa0184850:CDS 35.0%
TCTTACATCAAGATGTTCAG+CGG - chr1_4:74480024-74480043 None:intergenic 35.0%
TGTCTTTGGACAAACTGAAA+GGG - chr1_4:74480268-74480287 None:intergenic 35.0%
TTGTCTTTGGACAAACTGAA+AGG - chr1_4:74480269-74480288 None:intergenic 35.0%
CTGAAGTTCAATGTTGTCTT+TGG - chr1_4:74480282-74480301 None:intergenic 35.0%
TTACCACATACCTATGTGAT+TGG - chr1_4:74480312-74480331 None:intergenic 35.0%
ACACGCAAAAGTAAGAAAGA+AGG + chr1_4:74480584-74480603 Msa0184850:CDS 35.0%
TCTGCTGTAACTGTATAAAG+AGG - chr1_4:74480790-74480809 None:intergenic 35.0%
CTTTATACAGTTACAGCAGA+TGG + chr1_4:74480790-74480809 Msa0184850:intron 35.0%
TTATACAGTTACAGCAGATG+GGG + chr1_4:74480792-74480811 Msa0184850:intron 35.0%
CCAAAACATTAAGACAAGTG+AGG - chr1_4:74480947-74480966 None:intergenic 35.0%
! CCTCACTTGTCTTAATGTTT+TGG + chr1_4:74480944-74480963 Msa0184850:intron 35.0%
TAAAAAGGATGTCCTTAGGT+AGG + chr1_4:74480975-74480994 Msa0184850:intron 35.0%
AAAGAACACATACCTACCTA+AGG - chr1_4:74480990-74481009 None:intergenic 35.0%
AGTCAACTGATAAAAGCTCA+AGG - chr1_4:74481021-74481040 None:intergenic 35.0%
!! TTCATTCTTGACTTTTTGGG+TGG + chr1_4:74481474-74481493 Msa0184850:intron 35.0%
ATTACTTCTCCATCATGATC+AGG + chr1_4:74481574-74481593 Msa0184850:intron 35.0%
ACTGTTATGTCGGAAAAGAT+TGG - chr1_4:74481651-74481670 None:intergenic 35.0%
ATATGAATTATGCAGGTCAC+AGG + chr1_4:74481727-74481746 Msa0184850:intron 35.0%
ATTACAATGGTCATTCTGAG+TGG - chr1_4:74481974-74481993 None:intergenic 35.0%
!! CACTCACAAGCCTTTAAAAT+TGG + chr1_4:74482024-74482043 Msa0184850:intron 35.0%
!!! TTAGCTGGTTTGTTTTATGC+AGG + chr1_4:74482103-74482122 Msa0184850:intron 35.0%
CAGGTCTAATAAATGTGGTT+GGG + chr1_4:74482122-74482141 Msa0184850:intron 35.0%
!! TACTGATTTAACTTACCTGC+TGG - chr1_4:74482168-74482187 None:intergenic 35.0%
TAACTTTGTGTACGGAAAGA+AGG + chr1_4:74482299-74482318 Msa0184850:intron 35.0%
AACTTTGTGTACGGAAAGAA+GGG + chr1_4:74482300-74482319 Msa0184850:intron 35.0%
!!! AGATCCCATTATTTTGGGAA+TGG + chr1_4:74482359-74482378 Msa0184850:intron 35.0%
GGATCCATTCCCAAAATAAT+GGG - chr1_4:74482366-74482385 None:intergenic 35.0%
! TAGGTCTCACCATTTTATGT+GGG - chr1_4:74482387-74482406 None:intergenic 35.0%
ATTGGGAAGTGGAATTAAAG+TGG - chr1_4:74482466-74482485 None:intergenic 35.0%
AAGCTTCAAATTGGAGAGTT+TGG + chr1_4:74482509-74482528 Msa0184850:intron 35.0%
! AGTTTGGAAAAACGTGGTTT+TGG + chr1_4:74482525-74482544 Msa0184850:intron 35.0%
CCAACAACAACATTGGAATA+AGG - chr1_4:74482617-74482636 None:intergenic 35.0%
CCTTATTCCAATGTTGTTGT+TGG + chr1_4:74482614-74482633 Msa0184850:intron 35.0%
! TGATTTGGCAAAGAAACTCT+GGG + chr1_4:74482997-74483016 Msa0184850:CDS 35.0%
! TCATATTTTTCCCTCTGCAT+AGG + chr1_4:74483222-74483241 Msa0184850:three_prime_UTR 35.0%
AGAGACTGATACGCAATATG+TGG + chr1_4:74478589-74478608 Msa0184850:exon 40.0%
GAAACACCTTTCTTGCTGAA+TGG - chr1_4:74478615-74478634 None:intergenic 40.0%
!! TTCAGCAAGAAAGGTGTTTC+TGG + chr1_4:74478615-74478634 Msa0184850:CDS 40.0%
ACTGCTGAACAAGTTACACA+TGG + chr1_4:74478654-74478673 Msa0184850:CDS 40.0%
TATGGACCAACCAGTAACAA+TGG - chr1_4:74478703-74478722 None:intergenic 40.0%
! GCATGAAGAGATACCCTTTT+GGG - chr1_4:74478755-74478774 None:intergenic 40.0%
! TGCATGAAGAGATACCCTTT+TGG - chr1_4:74478756-74478775 None:intergenic 40.0%
TGGTATTGTGGAGGCTAAAT+TGG - chr1_4:74479285-74479304 None:intergenic 40.0%
GGAGGGTTAACACAAAAAAG+TGG - chr1_4:74479305-74479324 None:intergenic 40.0%
! TTGGTAATCCGGAGTTTGTA+AGG + chr1_4:74479345-74479364 Msa0184850:intron 40.0%
CGGAGTTTGTAAGGAATGTT+TGG + chr1_4:74479354-74479373 Msa0184850:intron 40.0%
TATTACACGATCCAAGCCAT+TGG - chr1_4:74479443-74479462 None:intergenic 40.0%
!!! CCACCACTAGTGGTTTTAAA+GGG - chr1_4:74479467-74479486 None:intergenic 40.0%
!!! ACCACCACTAGTGGTTTTAA+AGG - chr1_4:74479468-74479487 None:intergenic 40.0%
AGGGTTTCAAATTGTGGTTG+TGG - chr1_4:74479698-74479717 None:intergenic 40.0%
CAGTGTAGCATGCATATACA+GGG - chr1_4:74479717-74479736 None:intergenic 40.0%
TCAGTGTAGCATGCATATAC+AGG - chr1_4:74479718-74479737 None:intergenic 40.0%
GATTATGGGTGTGAGAAACA+TGG + chr1_4:74479867-74479886 Msa0184850:CDS 40.0%
ATGGCATCAAGTTTAGCAGA+GGG - chr1_4:74479934-74479953 None:intergenic 40.0%
TGAGCTAAGATCTAACTCCA+TGG - chr1_4:74479953-74479972 None:intergenic 40.0%
GGAGTTAGATCTTAGCTCAT+TGG + chr1_4:74479954-74479973 Msa0184850:CDS 40.0%
CAGTTGATTGGATCTTACTC+CGG - chr1_4:74480353-74480372 None:intergenic 40.0%
AATTGTTAATGTCGCCTCAG+AGG + chr1_4:74480610-74480629 Msa0184850:CDS 40.0%
!!! GAGGTGTTTTGTAAGTTGGT+TGG - chr1_4:74480856-74480875 None:intergenic 40.0%
!! CCTTGAGGTGTTTTGTAAGT+TGG - chr1_4:74480860-74480879 None:intergenic 40.0%
CCAACTTACAAAACACCTCA+AGG + chr1_4:74480857-74480876 Msa0184850:CDS 40.0%
GTAGAAGTAAGCATACCTTG+AGG - chr1_4:74480875-74480894 None:intergenic 40.0%
AGACTATAGCATGACCTCTT+TGG + chr1_4:74481072-74481091 Msa0184850:intron 40.0%
TCCATCATGATCAGGAAGAT+GGG + chr1_4:74481582-74481601 Msa0184850:intron 40.0%
ACTGCAAATTCTCTTCATCC+AGG + chr1_4:74481614-74481633 Msa0184850:CDS 40.0%
! AGATTGGTGACAATTGTTCC+TGG - chr1_4:74481635-74481654 None:intergenic 40.0%
ATTATGCAGGTCACAGGATT+TGG + chr1_4:74481733-74481752 Msa0184850:intron 40.0%
GCAGGTCTAATAAATGTGGT+TGG + chr1_4:74482121-74482140 Msa0184850:intron 40.0%
TGTGATGAAAAATGTCCAGC+AGG + chr1_4:74482150-74482169 Msa0184850:CDS 40.0%
GGGATCCATTCCCAAAATAA+TGG - chr1_4:74482367-74482386 None:intergenic 40.0%
GGAATGGATCCCACATAAAA+TGG + chr1_4:74482375-74482394 Msa0184850:intron 40.0%
! GTAGGTCTCACCATTTTATG+TGG - chr1_4:74482388-74482407 None:intergenic 40.0%
TTGGAGAGTTTGGAAAAACG+TGG + chr1_4:74482519-74482538 Msa0184850:intron 40.0%
!!! TTGGAAAAACGTGGTTTTGG+TGG + chr1_4:74482528-74482547 Msa0184850:intron 40.0%
!!! TGGAAAAACGTGGTTTTGGT+GGG + chr1_4:74482529-74482548 Msa0184850:intron 40.0%
TAAGTGCCTGTTTGTCATCA+CGG - chr1_4:74482561-74482580 None:intergenic 40.0%
! AATGTTGTTGTTGGGTCTAG+CGG + chr1_4:74482623-74482642 Msa0184850:intron 40.0%
! TGCGATTCTCTTTGTTGTGA+GGG - chr1_4:74482659-74482678 None:intergenic 40.0%
!! CTGATTTGGCAAAGAAACTC+TGG + chr1_4:74482996-74483015 Msa0184850:CDS 40.0%
CTGGGATTTCAGCATCAATT+TGG + chr1_4:74483015-74483034 Msa0184850:CDS 40.0%
!! TAGCATTGACGAGTAACACT+TGG - chr1_4:74483060-74483079 None:intergenic 40.0%
TAGTAAGGATCCTATGCAGA+GGG - chr1_4:74483235-74483254 None:intergenic 40.0%
ATGTGGCCATTCAGCAAGAA+AGG + chr1_4:74478606-74478625 Msa0184850:CDS 45.0%
ACACATGGAATCGATGCTAC+TGG + chr1_4:74478669-74478688 Msa0184850:CDS 45.0%
TCACTGCCATTGTTACTGGT+TGG + chr1_4:74478694-74478713 Msa0184850:intron 45.0%
TGGCCAAGAATTGTTTCACC+AGG + chr1_4:74479374-74479393 Msa0184850:intron 45.0%
!! TCGTTTTTGGGGAAGTCCAA+TGG + chr1_4:74479424-74479443 Msa0184850:intron 45.0%
!! CCCTTTAAAACCACTAGTGG+TGG + chr1_4:74479464-74479483 Msa0184850:intron 45.0%
CGCGGTGTTCATGTGATTAT+GGG + chr1_4:74479853-74479872 Msa0184850:CDS 45.0%
CATGGCATCAAGTTTAGCAG+AGG - chr1_4:74479935-74479954 None:intergenic 45.0%
CTCTGCTAAACTTGATGCCA+TGG + chr1_4:74479933-74479952 Msa0184850:CDS 45.0%
CAGTTTGCCACCAATCACAT+AGG + chr1_4:74480299-74480318 Msa0184850:CDS 45.0%
CCACATACCTATGTGATTGG+TGG - chr1_4:74480309-74480328 None:intergenic 45.0%
CCACCAATCACATAGGTATG+TGG + chr1_4:74480306-74480325 Msa0184850:intron 45.0%
CACAGGTTCGCATATTCTGA+AGG + chr1_4:74480635-74480654 Msa0184850:CDS 45.0%
!! GCATGACCTCTTTGGCTTTA+CGG + chr1_4:74481080-74481099 Msa0184850:intron 45.0%
CTCCATCATGATCAGGAAGA+TGG + chr1_4:74481581-74481600 Msa0184850:intron 45.0%
CCATCATGATCAGGAAGATG+GGG + chr1_4:74481583-74481602 Msa0184850:intron 45.0%
CGTTCACTGCACTGTTATGT+CGG - chr1_4:74481661-74481680 None:intergenic 45.0%
CGACATAACAGTGCAGTGAA+CGG + chr1_4:74481659-74481678 Msa0184850:CDS 45.0%
TGGTCATTCTGAGTGGTCAT+TGG - chr1_4:74481967-74481986 None:intergenic 45.0%
GATGGAATTGCATTGGGAAG+TGG - chr1_4:74482477-74482496 None:intergenic 45.0%
TATCCACCGTGATGACAAAC+AGG + chr1_4:74482552-74482571 Msa0184850:intron 45.0%
GCTAGACCCAACAACAACAT+TGG - chr1_4:74482624-74482643 None:intergenic 45.0%
! CTGCGATTCTCTTTGTTGTG+AGG - chr1_4:74482660-74482679 None:intergenic 45.0%
CACTAACTCCCTTCACTTGT+GGG - chr1_4:74482922-74482941 None:intergenic 45.0%
GTGTACAAAACAACCCCACA+TGG + chr1_4:74482965-74482984 Msa0184850:CDS 45.0%
ACAAAACAACCCCACATGGA+AGG + chr1_4:74482969-74482988 Msa0184850:CDS 45.0%
CAAAACAACCCCACATGGAA+GGG + chr1_4:74482970-74482989 Msa0184850:CDS 45.0%
CTAGTAAGGATCCTATGCAG+AGG - chr1_4:74483236-74483255 None:intergenic 45.0%
!!! ATAATATTTAAGTTTTTTTT+AGG - chr1_4:74482774-74482793 None:intergenic 5.0%
!! GTCCCTGCTTTTGTGACACA+CGG + chr1_4:74478559-74478578 Msa0184850:five_prime_UTR 50.0%
TGCCGTGTGTCACAAAAGCA+GGG - chr1_4:74478564-74478583 None:intergenic 50.0%
GGTCTCACTGCCATTGTTAC+TGG + chr1_4:74478690-74478709 Msa0184850:CDS 50.0%
! GAGAAAGGGGCTTGGTAATC+CGG + chr1_4:74479334-74479353 Msa0184850:intron 50.0%
TTTGGGGAAGTCCAATGGCT+TGG + chr1_4:74479429-74479448 Msa0184850:intron 50.0%
!! GTGATAACAGGAGCATCCAG+CGG + chr1_4:74479796-74479815 Msa0184850:intron 50.0%
GCGCGGTGTTCATGTGATTA+TGG + chr1_4:74479852-74479871 Msa0184850:CDS 50.0%
TACAGCAGATGGGGTGCATA+TGG + chr1_4:74480801-74480820 Msa0184850:CDS 50.0%
AACAGGCCGTAAAGCCAAAG+AGG - chr1_4:74481089-74481108 None:intergenic 50.0%
!! CTTTGGCTTTACGGCCTGTT+TGG + chr1_4:74481089-74481108 Msa0184850:intron 50.0%
CCCCATCTTCCTGATCATGA+TGG - chr1_4:74481586-74481605 None:intergenic 50.0%
TCATGATCAGGAAGATGGGG+TGG + chr1_4:74481586-74481605 Msa0184850:intron 50.0%
AGCATTGCACCCACAAGTGA+AGG + chr1_4:74482910-74482929 Msa0184850:CDS 50.0%
GCATTGCACCCACAAGTGAA+GGG + chr1_4:74482911-74482930 Msa0184850:CDS 50.0%
CCACTAACTCCCTTCACTTG+TGG - chr1_4:74482923-74482942 None:intergenic 50.0%
CCACAAGTGAAGGGAGTTAG+TGG + chr1_4:74482920-74482939 Msa0184850:CDS 50.0%
AATCAGCGTCCCTTCCATGT+GGG - chr1_4:74482982-74483001 None:intergenic 50.0%
AAATCAGCGTCCCTTCCATG+TGG - chr1_4:74482983-74483002 None:intergenic 50.0%
! ACATGGAAGGGACGCTGATT+TGG + chr1_4:74482982-74483001 Msa0184850:CDS 50.0%
CTGCCGTGTGTCACAAAAGC+AGG - chr1_4:74478565-74478584 None:intergenic 55.0%
GTGTTAACCCTCCGGTTCTC+AGG + chr1_4:74479312-74479331 Msa0184850:intron 55.0%
CCTTTCTCCTGAGAACCGGA+GGG - chr1_4:74479322-74479341 None:intergenic 55.0%
CCTCCGGTTCTCAGGAGAAA+GGG + chr1_4:74479320-74479339 Msa0184850:intron 55.0%
CTCCGGTTCTCAGGAGAAAG+GGG + chr1_4:74479321-74479340 Msa0184850:intron 55.0%
AGCCCCTTTCTCCTGAGAAC+CGG - chr1_4:74479326-74479345 None:intergenic 55.0%
GTTCTCAGGAGAAAGGGGCT+TGG + chr1_4:74479326-74479345 Msa0184850:intron 55.0%
ACTCGTGTCCTTGCTTTGCG+CGG + chr1_4:74479835-74479854 Msa0184850:CDS 55.0%
CATGAACACCGCGCAAAGCA+AGG - chr1_4:74479846-74479865 None:intergenic 55.0%
GTGCCTGTTTGTCATCACGG+TGG - chr1_4:74482558-74482577 None:intergenic 55.0%
ATCAGCGTCCCTTCCATGTG+GGG - chr1_4:74482981-74483000 None:intergenic 55.0%
CCCTCCGGTTCTCAGGAGAA+AGG + chr1_4:74479319-74479338 Msa0184850:intron 60.0%
CCCTTTCTCCTGAGAACCGG+AGG - chr1_4:74479323-74479342 None:intergenic 60.0%
!! ACAGGAGCATCCAGCGGCAT+TGG + chr1_4:74479802-74479821 Msa0184850:intron 60.0%
ATGTCGCCTCAGAGGCTCAC+AGG + chr1_4:74480618-74480637 Msa0184850:CDS 60.0%
TGCGAACCTGTGAGCCTCTG+AGG - chr1_4:74480627-74480646 None:intergenic 60.0%
AGTCTCAGCGCCAATGCCGC+TGG - chr1_4:74479815-74479834 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 74478513 74483322 74478513 ID=Msa0184850;Name=Msa0184850
chr1_4 mRNA 74478513 74483322 74478513 ID=Msa0184850-mRNA-1;Parent=Msa0184850;Name=Msa0184850-mRNA-1;_AED=0.18;_eAED=0.18;_QI=93|1|1|1|1|1|8|271|315
chr1_4 exon 74478513 74478711 74478513 ID=Msa0184850-mRNA-1:exon:25392;Parent=Msa0184850-mRNA-1
chr1_4 exon 74479806 74480037 74479806 ID=Msa0184850-mRNA-1:exon:25393;Parent=Msa0184850-mRNA-1
chr1_4 exon 74480241 74480320 74480241 ID=Msa0184850-mRNA-1:exon:25394;Parent=Msa0184850-mRNA-1
chr1_4 exon 74480537 74480690 74480537 ID=Msa0184850-mRNA-1:exon:25395;Parent=Msa0184850-mRNA-1
chr1_4 exon 74480800 74480878 74480800 ID=Msa0184850-mRNA-1:exon:25396;Parent=Msa0184850-mRNA-1
chr1_4 exon 74481596 74481680 74481596 ID=Msa0184850-mRNA-1:exon:25397;Parent=Msa0184850-mRNA-1
chr1_4 exon 74482125 74482171 74482125 ID=Msa0184850-mRNA-1:exon:25398;Parent=Msa0184850-mRNA-1
chr1_4 exon 74482887 74483322 74482887 ID=Msa0184850-mRNA-1:exon:25399;Parent=Msa0184850-mRNA-1
chr1_4 five_prime_UTR 74478513 74478605 74478513 ID=Msa0184850-mRNA-1:five_prime_utr;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74478606 74478711 74478606 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74479806 74480037 74479806 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74480241 74480320 74480241 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74480537 74480690 74480537 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74480800 74480878 74480800 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74481596 74481680 74481596 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74482125 74482171 74482125 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 CDS 74482887 74483051 74482887 ID=Msa0184850-mRNA-1:cds;Parent=Msa0184850-mRNA-1
chr1_4 three_prime_UTR 74483052 74483322 74483052 ID=Msa0184850-mRNA-1:three_prime_utr;Parent=Msa0184850-mRNA-1
Gene Sequence

>Msa0184850

ATGTGGCCATTCAGCAAGAAAGGTGTTTCTGGTTTTTCATGGAACTCAACTGCTGAACAAGTTACACATGGAATCGATGCTACTGGTCTCACTGCCATTGTTACTGGAGCATCCAGCGGCATTGGCGCTGAGACTACTCGTGTCCTTGCTTTGCGCGGTGTTCATGTGATTATGGGTGTGAGAAACATGGTTGCTGCTAAAGATGTCAAAGAAACAATACTCAAGGACATTCCCTCTGCTAAACTTGATGCCATGGAGTTAGATCTTAGCTCATTGGACTCTGTCAAGAAATTTGCATCTGAGTATAATTCTTCTGGTCGTCCGCTGAACATCTTGATAAATAATGCAGGAATTATGGCATGCCCTTTCAGTTTGTCCAAAGACAACATTGAACTTCAGTTTGCCACCAATCACATAGGTCATTTTCTCTTGACAAATCTTTTGTTGGATACTATGAAGAAAACGACACGCAAAAGTAAGAAAGAAGGAAGAATTGTTAATGTCGCCTCAGAGGCTCACAGGTTCGCATATTCTGAAGGAATCCGTTTTGATAAAATCAATGACGAATCAAGTTACAGCAGATGGGGTGCATATGGACAGTCAAAACTTGCTAACATTTTACATGCCAACCAACTTACAAAACACCTCAAGGAAGATGGGGTGGATATTACTGCAAATTCTCTTCATCCAGGAACAATTGTCACCAATCTTTTCCGACATAACAGTGCAGTGAACGGTCTAATAAATGTGGTTGGGAGACTTGTGATGAAAAATGTCCAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAGTTAGTGGTGAATATTTTTCAGACAGTAATGTGTACAAAACAACCCCACATGGAAGGGACGCTGATTTGGCAAAGAAACTCTGGGATTTCAGCATCAATTTGGTTAAGCAGAAATAG

Protein sequence

>Msa0184850

MWPFSKKGVSGFSWNSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGVHVIMGVRNMVAAKDVKETILKDIPSAKLDAMELDLSSLDSVKKFASEYNSSGRPLNILINNAGIMACPFSLSKDNIELQFATNHIGHFLLTNLLLDTMKKTTRKSKKEGRIVNVASEAHRFAYSEGIRFDKINDESSYSRWGAYGQSKLANILHANQLTKHLKEDGVDITANSLHPGTIVTNLFRHNSAVNGLINVVGRLVMKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGRDADLAKKLWDFSINLVKQK*