Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07431.t1 | XP_024637017.1 | 94.5 | 383 | 14 | 2 | 6 | 388 | 4 | 379 | 6.90E-203 | 716.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07431.t1 | P51281 | 58.4 | 327 | 133 | 2 | 54 | 379 | 5 | 329 | 1.6e-104 | 380.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07431.t1 | A0A396JQ65 | 94.5 | 383 | 14 | 2 | 6 | 388 | 4 | 379 | 5.0e-203 | 716.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene07431 | 0.811842 | 5.72E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene07431 | 0.812043 | 5.17E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene07431 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene049284 | MS.gene07431 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene07431 | 0.837646 | 4.60E-57 | -1.69E-46 |
| MS.gene04933 | MS.gene07431 | 0.804671 | 1.93E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene07431 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene07431 | 0.862329 | 5.48E-64 | -1.69E-46 |
| MS.gene049389 | MS.gene07431 | 0.83451 | 2.88E-56 | -1.69E-46 |
| MS.gene049491 | MS.gene07431 | 0.833501 | 5.14E-56 | -1.69E-46 |
| MS.gene049599 | MS.gene07431 | -0.810132 | 1.34E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene07431 | 0.822458 | 2.34E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene07431 | 0.825366 | 4.88E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene07431 | 0.896718 | 2.82E-76 | -1.69E-46 |
| MS.gene049910 | MS.gene07431 | 0.834978 | 2.19E-56 | -1.69E-46 |
| MS.gene049915 | MS.gene07431 | 0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene07431 | 0.837864 | 4.04E-57 | -1.69E-46 |
| MS.gene050099 | MS.gene07431 | 0.87855 | 2.57E-69 | -1.69E-46 |
| MS.gene050128 | MS.gene07431 | 0.831927 | 1.26E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene07431 | 0.905254 | 5.21E-80 | -1.69E-46 |
| MS.gene050319 | MS.gene07431 | -0.816784 | 4.63E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene07431 | -0.810559 | 1.09E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene07431 | 0.864628 | 1.06E-64 | -1.69E-46 |
| MS.gene050404 | MS.gene07431 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene050406 | MS.gene07431 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene07431 | 0.801034 | 1.09E-48 | -1.69E-46 |
| MS.gene050464 | MS.gene07431 | 0.84919 | 3.79E-60 | -1.69E-46 |
| MS.gene050516 | MS.gene07431 | 0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene050529 | MS.gene07431 | 0.858614 | 7.30E-63 | -1.69E-46 |
| MS.gene050558 | MS.gene07431 | 0.885633 | 6.87E-72 | -1.69E-46 |
| MS.gene050560 | MS.gene07431 | 0.801576 | 8.44E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene07431 | 0.824704 | 6.99E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene07431 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene07431 | 0.808801 | 2.59E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene07431 | 0.878872 | 1.98E-69 | -1.69E-46 |
| MS.gene05119 | MS.gene07431 | -0.807614 | 4.64E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene07431 | 0.865049 | 7.83E-65 | -1.69E-46 |
| MS.gene051487 | MS.gene07431 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene07431 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene07431 | 0.869631 | 2.68E-66 | -1.69E-46 |
| MS.gene051663 | MS.gene07431 | 0.8774 | 6.48E-69 | -1.69E-46 |
| MS.gene051860 | MS.gene07431 | 0.887216 | 1.73E-72 | -1.69E-46 |
| MS.gene051877 | MS.gene07431 | 0.823848 | 1.11E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene07431 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene07431 | -0.802036 | 6.79E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene07431 | 0.828355 | 9.41E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene07431 | 0.876882 | 9.80E-69 | -1.69E-46 |
| MS.gene052178 | MS.gene07431 | 0.863575 | 2.26E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene07431 | 0.84848 | 5.97E-60 | -1.69E-46 |
| MS.gene052207 | MS.gene07431 | 0.868793 | 5.01E-66 | -1.69E-46 |
| MS.gene052253 | MS.gene07431 | 0.847466 | 1.14E-59 | -1.69E-46 |
| MS.gene052255 | MS.gene07431 | 0.816491 | 5.38E-52 | -1.69E-46 |
| MS.gene052287 | MS.gene07431 | 0.807952 | 3.93E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene07431 | 0.847304 | 1.26E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene07431 | 0.845912 | 3.02E-59 | -1.69E-46 |
| MS.gene052340 | MS.gene07431 | 0.840683 | 7.50E-58 | -1.69E-46 |
| MS.gene052485 | MS.gene07431 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene07431 | 0.81958 | 1.08E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene07431 | 0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene053836 | MS.gene07431 | 0.925887 | 9.97E-91 | -1.69E-46 |
| MS.gene053907 | MS.gene07431 | 0.833445 | 5.31E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene07431 | 0.817236 | 3.66E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene07431 | 0.815629 | 8.38E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene07431 | 0.821484 | 3.94E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene07431 | 0.847677 | 9.94E-60 | -1.69E-46 |
| MS.gene054012 | MS.gene07431 | 0.833613 | 4.82E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene07431 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene07431 | 0.826943 | 2.06E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene07431 | 0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene07431 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene054185 | MS.gene07431 | 0.82191 | 3.14E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene07431 | 0.808254 | 3.39E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene07431 | 0.868956 | 4.44E-66 | -1.69E-46 |
| MS.gene05455 | MS.gene07431 | 0.849523 | 3.06E-60 | -1.69E-46 |
| MS.gene054667 | MS.gene07431 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene07431 | 0.818365 | 2.04E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene07431 | 0.850163 | 2.03E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene07431 | 0.847403 | 1.18E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene07431 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene07431 | 0.899401 | 2.06E-77 | -1.69E-46 |
| MS.gene055303 | MS.gene07431 | 0.815517 | 8.88E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene07431 | 0.883927 | 2.96E-71 | -1.69E-46 |
| MS.gene055422 | MS.gene07431 | 0.91057 | 1.62E-82 | -1.69E-46 |
| MS.gene055428 | MS.gene07431 | 0.890381 | 1.04E-73 | -1.69E-46 |
| MS.gene05553 | MS.gene07431 | 0.802921 | 4.46E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene07431 | 0.871017 | 9.41E-67 | -1.69E-46 |
| MS.gene055712 | MS.gene07431 | 0.858292 | 9.10E-63 | -1.69E-46 |
| MS.gene056069 | MS.gene07431 | -0.817312 | 3.52E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene07431 | 0.84823 | 7.00E-60 | -1.69E-46 |
| MS.gene056407 | MS.gene07431 | 0.831058 | 2.07E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene07431 | 0.839972 | 1.15E-57 | -1.69E-46 |
| MS.gene056451 | MS.gene07431 | 0.809378 | 1.95E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene07431 | 0.886872 | 2.34E-72 | -1.69E-46 |
| MS.gene056796 | MS.gene07431 | 0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene07431 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene056902 | MS.gene07431 | 0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene07431 | 0.816632 | 5.00E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene07431 | 0.864767 | 9.59E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene07431 | 0.892903 | 1.03E-74 | -1.69E-46 |
| MS.gene057245 | MS.gene07431 | 0.87581 | 2.30E-68 | -1.69E-46 |
| MS.gene057260 | MS.gene07431 | 0.836119 | 1.13E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene07431 | 0.826755 | 2.28E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene07431 | 0.902348 | 1.06E-78 | -1.69E-46 |
| MS.gene057448 | MS.gene07431 | 0.830861 | 2.31E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene07431 | 0.809661 | 1.69E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene07431 | 0.8339 | 4.09E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene07431 | 0.830242 | 3.28E-55 | -1.69E-46 |
| MS.gene057754 | MS.gene07431 | 0.801224 | 9.96E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene07431 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene07431 | 0.895822 | 6.65E-76 | -1.69E-46 |
| MS.gene058082 | MS.gene07431 | 0.819032 | 1.44E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene07431 | 0.909718 | 4.18E-82 | -1.69E-46 |
| MS.gene058142 | MS.gene07431 | 0.855955 | 4.46E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene07431 | 0.845467 | 3.99E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene07431 | 0.827173 | 1.81E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene07431 | 0.837905 | 3.94E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene07431 | 0.800304 | 1.54E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene07431 | 0.885709 | 6.44E-72 | -1.69E-46 |
| MS.gene058710 | MS.gene07431 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene07431 | 0.846845 | 1.68E-59 | -1.69E-46 |
| MS.gene058787 | MS.gene07431 | 0.827596 | 1.43E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene07431 | 0.800018 | 1.75E-48 | -1.69E-46 |
| MS.gene058845 | MS.gene07431 | 0.859749 | 3.34E-63 | -1.69E-46 |
| MS.gene05886 | MS.gene07431 | 0.834753 | 2.50E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene07431 | 0.900208 | 9.22E-78 | -1.69E-46 |
| MS.gene059228 | MS.gene07431 | 0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene07431 | 0.815541 | 8.77E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene07431 | 0.845398 | 4.16E-59 | -1.69E-46 |
| MS.gene059326 | MS.gene07431 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene059342 | MS.gene07431 | 0.83134 | 1.76E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene07431 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene07431 | 0.890049 | 1.40E-73 | -1.69E-46 |
| MS.gene059597 | MS.gene07431 | 0.865973 | 4.00E-65 | -1.69E-46 |
| MS.gene059676 | MS.gene07431 | 0.844405 | 7.72E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene07431 | 0.843896 | 1.06E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene07431 | 0.860095 | 2.62E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene07431 | 0.860699 | 1.72E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene07431 | 0.889817 | 1.72E-73 | -1.69E-46 |
| MS.gene059894 | MS.gene07431 | 0.864441 | 1.21E-64 | -1.69E-46 |
| MS.gene059899 | MS.gene07431 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene060005 | MS.gene07431 | 0.800674 | 1.29E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene07431 | 0.887377 | 1.50E-72 | -1.69E-46 |
| MS.gene060403 | MS.gene07431 | 0.800029 | 1.75E-48 | -1.69E-46 |
| MS.gene060407 | MS.gene07431 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene07431 | 0.855415 | 6.41E-62 | -1.69E-46 |
| MS.gene060559 | MS.gene07431 | 0.816295 | 5.95E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene07431 | 0.817846 | 2.67E-52 | -1.69E-46 |
| MS.gene060994 | MS.gene07431 | 0.807305 | 5.40E-50 | -1.69E-46 |
| MS.gene061000 | MS.gene07431 | 0.803324 | 3.68E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene07431 | 0.895682 | 7.60E-76 | -1.69E-46 |
| MS.gene061051 | MS.gene07431 | -0.81081 | 9.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07431.t1 | MTR_1g076810 | 93.883 | 376 | 20 | 1 | 13 | 388 | 290 | 662 | 0.0 | 726 |
| MS.gene07431.t1 | MTR_1g111400 | 53.314 | 347 | 150 | 4 | 30 | 372 | 63 | 401 | 9.48e-118 | 351 |
| MS.gene07431.t1 | MTR_8g463650 | 54.114 | 316 | 142 | 2 | 55 | 369 | 67 | 380 | 3.72e-117 | 348 |
| MS.gene07431.t1 | MTR_8g463650 | 54.114 | 316 | 142 | 2 | 55 | 369 | 67 | 380 | 6.60e-117 | 348 |
| MS.gene07431.t1 | MTR_8g463650 | 54.114 | 316 | 142 | 2 | 55 | 369 | 67 | 380 | 9.64e-117 | 350 |
| MS.gene07431.t1 | MTR_1g111400 | 53.314 | 347 | 150 | 4 | 30 | 372 | 63 | 401 | 5.70e-116 | 353 |
| MS.gene07431.t1 | MTR_8g463650 | 54.114 | 316 | 142 | 2 | 55 | 369 | 67 | 380 | 4.04e-115 | 350 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07431.t1 | AT1G33290 | 72.480 | 367 | 98 | 2 | 21 | 385 | 10 | 375 | 0.0 | 546 |
| MS.gene07431.t1 | AT1G33290 | 79.734 | 301 | 61 | 0 | 85 | 385 | 1 | 301 | 0.0 | 504 |
| MS.gene07431.t1 | AT3G10420 | 56.646 | 316 | 134 | 2 | 55 | 369 | 96 | 409 | 8.34e-118 | 353 |
| MS.gene07431.t1 | AT3G10420 | 56.646 | 316 | 134 | 2 | 55 | 369 | 96 | 409 | 8.10e-117 | 355 |
| MS.gene07431.t1 | AT1G73170 | 51.032 | 339 | 162 | 3 | 53 | 389 | 78 | 414 | 1.39e-114 | 348 |
| MS.gene07431.t1 | AT1G73170 | 51.032 | 339 | 162 | 3 | 53 | 389 | 78 | 414 | 1.49e-114 | 348 |
| MS.gene07431.t1 | AT1G73170 | 56.089 | 271 | 117 | 2 | 121 | 389 | 16 | 286 | 1.21e-100 | 309 |
| MS.gene07431.t1 | AT1G33290 | 68.447 | 206 | 62 | 2 | 25 | 228 | 14 | 218 | 1.04e-92 | 280 |
| MS.gene07431.t1 | AT1G33290 | 77.381 | 84 | 19 | 0 | 302 | 385 | 216 | 299 | 6.21e-39 | 141 |
| MS.gene07431.t1 | AT1G73170 | 47.857 | 140 | 71 | 2 | 252 | 389 | 1 | 140 | 4.48e-33 | 128 |
Find 91 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGGAGCAGTTGGAGATTT+TGG | 0.126961 | 1.2:-63677518 | MS.gene07431:CDS |
| TCATCAGGTTATATTGGATT+TGG | 0.200322 | 1.2:-63677890 | MS.gene07431:intron |
| CATTCTTCATCAGGTTATAT+TGG | 0.246485 | 1.2:-63677896 | MS.gene07431:intron |
| ACCTAACCGCCCTCAACTTT+TGG | 0.250887 | 1.2:-63678095 | MS.gene07431:CDS |
| GAGCGAGGCATCATGCTTAT+AGG | 0.265973 | 1.2:-63676276 | MS.gene07431:CDS |
| CCTCAGAATTTCTTAGATAA+TGG | 0.274877 | 1.2:+63677827 | None:intergenic |
| ATCACCTCCAATTTCATTAC+TGG | 0.299857 | 1.2:+63676467 | None:intergenic |
| GTTGATACCAGTAATGAAAT+TGG | 0.304856 | 1.2:-63676474 | MS.gene07431:CDS |
| GTTTATGATCTGCTTCAATA+TGG | 0.323340 | 1.2:-63677371 | MS.gene07431:CDS |
| CATCAGGTTATATTGGATTT+GGG | 0.325306 | 1.2:-63677889 | MS.gene07431:intron |
| ATCACGCTATGTTGCATTGA+TGG | 0.341246 | 1.2:+63676390 | None:intergenic |
| CGACCTCCAAGCTCTCTTAC+AGG | 0.348222 | 1.2:-63678222 | MS.gene07431:intron |
| TTGCCTAGATACCACGCTTC+AGG | 0.352168 | 1.2:+63677859 | None:intergenic |
| AGTAGGAATGGTGGCATTGT+TGG | 0.363900 | 1.2:-63677440 | MS.gene07431:CDS |
| GATCATAAACCATGTCAATA+TGG | 0.372234 | 1.2:+63677384 | None:intergenic |
| AGCGAGGCATCATGCTTATA+GGG | 0.403823 | 1.2:-63676275 | MS.gene07431:CDS |
| TTTCCTGAAGCGTGGTATCT+AGG | 0.404181 | 1.2:-63677862 | MS.gene07431:CDS |
| TGCACAGAATATCAGCAATA+AGG | 0.410002 | 1.2:-63677463 | MS.gene07431:CDS |
| CGGCATAGCATTTGAATTTG+AGG | 0.430174 | 1.2:+63678291 | None:intergenic |
| GGCATGTTGGTCATGTTTGA+TGG | 0.431863 | 1.2:-63678363 | MS.gene07431:CDS |
| TTGGTTTGACGTGTCGGATT+GGG | 0.436479 | 1.2:-63677421 | MS.gene07431:CDS |
| CATTTGCTTTATTAGATTGG+TGG | 0.439996 | 1.2:-63675693 | MS.gene07431:intron |
| AATATTCCTCATGCAGCAAT+AGG | 0.447097 | 1.2:-63676441 | MS.gene07431:CDS |
| GTAGTACCTGTAAGAGAGCT+TGG | 0.449576 | 1.2:+63678216 | None:intergenic |
| GATAATAGAGCTGGTATTGA+AGG | 0.452494 | 1.2:-63677491 | MS.gene07431:CDS |
| GGCATAGCATTTGAATTTGA+GGG | 0.454237 | 1.2:+63678292 | None:intergenic |
| AGGCAAGACCCCACAGGTTG+AGG | 0.471366 | 1.2:-63674819 | MS.gene07431:intron |
| CGGATTGGGAGGGCTGTCAC+TGG | 0.472439 | 1.2:-63677407 | MS.gene07431:CDS |
| ACACTACTGGGTTACACATC+AGG | 0.473781 | 1.2:-63675556 | MS.gene07431:intron |
| GATTCTTCCAGGCCTGGGGT+TGG | 0.476303 | 1.2:-63676660 | MS.gene07431:intron |
| GTTGGTTTGACGTGTCGGAT+TGG | 0.489931 | 1.2:-63677422 | MS.gene07431:CDS |
| TCCAAAAGTTGAGGGCGGTT+AGG | 0.499259 | 1.2:+63678094 | None:intergenic |
| GATACCACGCTTCAGGAAAA+CGG | 0.499913 | 1.2:+63677866 | None:intergenic |
| AGATGAGAGATAGACACTAC+TGG | 0.502286 | 1.2:-63675569 | MS.gene07431:CDS |
| AGTAATGAAATTGGAGGTGA+TGG | 0.508241 | 1.2:-63676465 | MS.gene07431:CDS |
| GCATTGTTGGTTTGACGTGT+CGG | 0.509058 | 1.2:-63677427 | MS.gene07431:CDS |
| GTTTGACGTGTCGGATTGGG+AGG | 0.510749 | 1.2:-63677418 | MS.gene07431:CDS |
| GACCTACCTCCAAAAGTTGA+GGG | 0.510772 | 1.2:+63678086 | None:intergenic |
| TGGAATTGAAAGTGTTACTC+TGG | 0.516865 | 1.2:-63675673 | MS.gene07431:CDS |
| GTGATTATAGTAGATGAGAT+TGG | 0.517092 | 1.2:-63676336 | MS.gene07431:CDS |
| TCATCTACTATAATCACCTC+AGG | 0.528346 | 1.2:+63676342 | None:intergenic |
| CAGCAACAACAGCAGCATCA+TGG | 0.530280 | 1.2:-63678334 | MS.gene07431:CDS |
| GAATATGCTGAAGGAGCAGT+TGG | 0.530400 | 1.2:-63677527 | MS.gene07431:CDS |
| ACAGTAGTCTTGCCAACCCC+AGG | 0.537874 | 1.2:+63676648 | None:intergenic |
| ACAAGAGAACACTGTGACTG+TGG | 0.540268 | 1.2:+63678254 | None:intergenic |
| GCTATGTTGCATTGATGGCT+CGG | 0.540454 | 1.2:+63676395 | None:intergenic |
| TCAATCAAGAAATCAAATGT+TGG | 0.540516 | 1.2:+63675591 | None:intergenic |
| AAAGTTGAGGGCGGTTAGGT+TGG | 0.545084 | 1.2:+63678098 | None:intergenic |
| TTTGGGAAGGATAATAGAGC+TGG | 0.546805 | 1.2:-63677500 | MS.gene07431:CDS |
| ATGCTTATAGGGACTGCTCA+TGG | 0.547544 | 1.2:-63676264 | MS.gene07431:CDS |
| CTAGGTAACAATGAGAGAGT+TGG | 0.547690 | 1.2:-63677549 | MS.gene07431:intron |
| GAACACTGTGACTGTGGCTG+TGG | 0.554157 | 1.2:+63678260 | None:intergenic |
| AGGTGGTGCACGTAGAATGC+AGG | 0.554707 | 1.2:-63676421 | MS.gene07431:CDS |
| TTTGGATTCTTCCAGGCCTG+GGG | 0.555222 | 1.2:-63676664 | MS.gene07431:intron |
| GCAACATAGCGTGATGATTG+AGG | 0.555819 | 1.2:-63676382 | MS.gene07431:CDS |
| GAATCCTACGCTCTCTGACC+TGG | 0.561221 | 1.2:-63676217 | MS.gene07431:intron |
| TGCCTCGCTCAGCAATCGAC+CGG | 0.568637 | 1.2:+63676289 | None:intergenic |
| AGCGTAGATATATTGCTTCG+AGG | 0.569413 | 1.2:-63674839 | MS.gene07431:CDS |
| GAATATCAGCAATAAGGAGT+AGG | 0.577619 | 1.2:-63677457 | MS.gene07431:CDS |
| TGCCGGTCGATTGCTGAGCG+AGG | 0.579543 | 1.2:-63676291 | MS.gene07431:CDS |
| GCTTCGAGGCAAGACCCCAC+AGG | 0.579998 | 1.2:-63674825 | MS.gene07431:CDS |
| CATTTGAATTTGAGGGTCGG+TGG | 0.585953 | 1.2:+63678299 | None:intergenic |
| GGACCTACCTCCAAAAGTTG+AGG | 0.588490 | 1.2:+63678085 | None:intergenic |
| AAGCTGAAGCTCATGCATGC+CGG | 0.588992 | 1.2:-63676308 | MS.gene07431:CDS |
| TGTCACTGGCCATATTGACA+TGG | 0.589779 | 1.2:-63677393 | MS.gene07431:CDS |
| TTTGACGTGTCGGATTGGGA+GGG | 0.591021 | 1.2:-63677417 | MS.gene07431:CDS |
| ATCAAGAAATCAAATGTTGG+AGG | 0.591943 | 1.2:+63675594 | None:intergenic |
| TCAGCAATAAGGAGTAGGAA+TGG | 0.597931 | 1.2:-63677452 | MS.gene07431:CDS |
| GAAGAATTACCTCAACCTGT+GGG | 0.599084 | 1.2:+63674810 | None:intergenic |
| TAGCATTTGAATTTGAGGGT+CGG | 0.608467 | 1.2:+63678296 | None:intergenic |
| GTACCTGTAAGAGAGCTTGG+AGG | 0.612753 | 1.2:+63678219 | None:intergenic |
| AATGATAGTTGCAAATGCAA+TGG | 0.613364 | 1.2:-63678384 | MS.gene07431:CDS |
| GTCAGAAGACTATTCTTGAG+AGG | 0.618967 | 1.2:-63675623 | MS.gene07431:CDS |
| GATGAGAGATAGACACTACT+GGG | 0.625526 | 1.2:-63675568 | MS.gene07431:CDS |
| AGATTGTGATGCAAATCTGA+AGG | 0.626064 | 1.2:+63678127 | None:intergenic |
| ATTCCTCATGCAGCAATAGG+TGG | 0.626244 | 1.2:-63676438 | MS.gene07431:CDS |
| CTGTGGCTGTGGCTGAGTCG+CGG | 0.631504 | 1.2:+63678271 | None:intergenic |
| AGAGAGTTGGAATATGCTGA+AGG | 0.635157 | 1.2:-63677536 | MS.gene07431:CDS |
| CCATTATCTAAGAAATTCTG+AGG | 0.637235 | 1.2:-63677827 | MS.gene07431:intron |
| AGATGAATTTCACAAAAGAG+TGG | 0.647161 | 1.2:-63676598 | MS.gene07431:intron |
| TGAAGAATTACCTCAACCTG+TGG | 0.649387 | 1.2:+63674809 | None:intergenic |
| TTGCAAATGCAATGGCATGT+TGG | 0.650133 | 1.2:-63678376 | MS.gene07431:CDS |
| GCACCACCTATTGCTGCATG+AGG | 0.660141 | 1.2:+63676435 | None:intergenic |
| GGAATTGAAAGTGTTACTCT+GGG | 0.661020 | 1.2:-63675672 | MS.gene07431:CDS |
| GCGTGGTATCTAGGCAAACA+CGG | 0.661479 | 1.2:-63677853 | MS.gene07431:CDS |
| GCAATAAGGAGTAGGAATGG+TGG | 0.666850 | 1.2:-63677449 | MS.gene07431:CDS |
| GATACCAGTAATGAAATTGG+AGG | 0.667560 | 1.2:-63676471 | MS.gene07431:CDS |
| CGAACCAGGTCAGAGAGCGT+AGG | 0.667831 | 1.2:+63676213 | None:intergenic |
| AAGAATTACCTCAACCTGTG+GGG | 0.683693 | 1.2:+63674811 | None:intergenic |
| AGTAGAAAATCATATGCCTG+AGG | 0.712015 | 1.2:-63676358 | MS.gene07431:CDS |
| CTACCTCCAAAAGTTGAGGG+CGG | 0.712694 | 1.2:+63678089 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGAATCATAAATTATTAAA+AGG | - | chr1.2:63675541-63675560 | MS.gene07431:intron | 10.0% |
| !! | AAAAATTAGTACAATTATCA+GGG | + | chr1.2:63677136-63677155 | None:intergenic | 15.0% |
| !! | AACATAAATCTTCATATAAT+AGG | + | chr1.2:63678061-63678080 | None:intergenic | 15.0% |
| !! | TAAAAATTAGTACAATTATC+AGG | + | chr1.2:63677137-63677156 | None:intergenic | 15.0% |
| !! | TAAAACTAAATAAGAAAAGT+GGG | + | chr1.2:63674631-63674650 | None:intergenic | 15.0% |
| !!! | CAATTTTATCATCTTATATT+TGG | - | chr1.2:63675094-63675113 | MS.gene07431:intron | 15.0% |
| !!! | GTAATACTTTTCATTTATTT+TGG | - | chr1.2:63677597-63677616 | MS.gene07431:intron | 15.0% |
| !!! | GTTATAATTTTAACTTTCTA+GGG | + | chr1.2:63678216-63678235 | None:intergenic | 15.0% |
| !!! | TGTTATAATTTTAACTTTCT+AGG | + | chr1.2:63678217-63678236 | None:intergenic | 15.0% |
| !!! | TTATGATTCTATTTTGTTAT+TGG | + | chr1.2:63675532-63675551 | None:intergenic | 15.0% |
| !!! | TTGAATTTTATTATTGTAAC+AGG | - | chr1.2:63676974-63676993 | MS.gene07431:intron | 15.0% |
| !! | AAAAAAGAAAGTTGTAAGAA+AGG | + | chr1.2:63674123-63674142 | None:intergenic | 20.0% |
| !! | AAACCATAATAAATTCGTAA+AGG | + | chr1.2:63676336-63676355 | None:intergenic | 20.0% |
| !! | AACAAAGAGAGATAAATAAT+AGG | + | chr1.2:63674229-63674248 | None:intergenic | 20.0% |
| !! | AATCAAATAGTCATTTCATT+TGG | + | chr1.2:63677663-63677682 | None:intergenic | 20.0% |
| !! | ACAAAGAGAGATAAATAATA+GGG | + | chr1.2:63674228-63674247 | None:intergenic | 20.0% |
| !! | ACAATGTTATTAACAGAAAA+CGG | + | chr1.2:63677108-63677127 | None:intergenic | 20.0% |
| !! | AGAATGAATTCTTTCAAATT+GGG | - | chr1.2:63675783-63675802 | MS.gene07431:intron | 20.0% |
| !! | ATGTATGTCAAATATGAAAA+TGG | + | chr1.2:63676903-63676922 | None:intergenic | 20.0% |
| !! | ATGTATTAATGATCAATTCA+AGG | - | chr1.2:63678247-63678266 | MS.gene07431:CDS | 20.0% |
| !! | CTAAAACTAAATAAGAAAAG+TGG | + | chr1.2:63674632-63674651 | None:intergenic | 20.0% |
| !! | GAATTGATCATTAATACATT+GGG | + | chr1.2:63678246-63678265 | None:intergenic | 20.0% |
| !! | GCTGTTAATTGTAATATATT+TGG | - | chr1.2:63675175-63675194 | MS.gene07431:intron | 20.0% |
| !! | GGAAAAATCTTATAGATTAT+TGG | + | chr1.2:63676124-63676143 | None:intergenic | 20.0% |
| !! | TACCATTTATAATAGATCAT+GGG | + | chr1.2:63675476-63675495 | None:intergenic | 20.0% |
| !! | TAGAATGAATTCTTTCAAAT+TGG | - | chr1.2:63675782-63675801 | MS.gene07431:intron | 20.0% |
| !! | TATAGTATAGTATACTATGT+CGG | + | chr1.2:63674351-63674370 | None:intergenic | 20.0% |
| !! | TCTAACTCATTATTACAAAA+CGG | + | chr1.2:63674544-63674563 | None:intergenic | 20.0% |
| !! | TGAATTGATCATTAATACAT+TGG | + | chr1.2:63678247-63678266 | None:intergenic | 20.0% |
| !! | TTACCATTTATAATAGATCA+TGG | + | chr1.2:63675477-63675496 | None:intergenic | 20.0% |
| !! | TTTCATATTTGACATACATT+TGG | - | chr1.2:63676904-63676923 | MS.gene07431:intron | 20.0% |
| !!! | ATTAAATCTGTTTTATCTTG+TGG | + | chr1.2:63675283-63675302 | None:intergenic | 20.0% |
| !!! | GGTAACTATATCTTATTTTA+TGG | - | chr1.2:63676405-63676424 | MS.gene07431:CDS | 20.0% |
| !!! | TAAACTAAGCTTTAGAAATT+AGG | + | chr1.2:63674995-63675014 | None:intergenic | 20.0% |
| !!! | TATTATTTCTCTTTTACGTT+TGG | - | chr1.2:63678121-63678140 | MS.gene07431:CDS | 20.0% |
| !!! | TGAAATGACTATTTGATTTT+TGG | - | chr1.2:63677665-63677684 | MS.gene07431:intron | 20.0% |
| ! | AAAAAGAATGTTCTGTTCAA+AGG | - | chr1.2:63674678-63674697 | MS.gene07431:intron | 25.0% |
| ! | AAAAAGAGATGAGAAATACA+AGG | - | chr1.2:63678339-63678358 | MS.gene07431:CDS | 25.0% |
| ! | AAAGGATGTAAATATGTCAT+TGG | - | chr1.2:63677203-63677222 | MS.gene07431:intron | 25.0% |
| ! | AATCTAATAAAGCAAATGGA+GGG | + | chr1.2:63676594-63676613 | None:intergenic | 25.0% |
| ! | AATTTAATAACTCTAGTCAG+AGG | - | chr1.2:63676377-63676396 | MS.gene07431:CDS | 25.0% |
| ! | ATAATAAAGAAGTGATGCAT+TGG | + | chr1.2:63674587-63674606 | None:intergenic | 25.0% |
| ! | ATATGAAGATTTATGTTCCA+AGG | - | chr1.2:63678064-63678083 | MS.gene07431:intron | 25.0% |
| ! | ATGTAACTTCCATAAAATCA+GGG | + | chr1.2:63677952-63677971 | None:intergenic | 25.0% |
| ! | CACTTAAAAATTTAGTCTAG+TGG | - | chr1.2:63677301-63677320 | MS.gene07431:intron | 25.0% |
| ! | GCATATCATTCTTGAAAATA+AGG | + | chr1.2:63677542-63677561 | None:intergenic | 25.0% |
| ! | TATGTAACTTCCATAAAATC+AGG | + | chr1.2:63677953-63677972 | None:intergenic | 25.0% |
| ! | TCAACTGTGTTTAAAAGAAA+AGG | - | chr1.2:63676227-63676246 | MS.gene07431:CDS | 25.0% |
| ! | TCAATCAAGAAATCAAATGT+TGG | + | chr1.2:63676701-63676720 | None:intergenic | 25.0% |
| ! | TGTAATATATTTGGTCTGTT+TGG | - | chr1.2:63675184-63675203 | MS.gene07431:intron | 25.0% |
| ! | TTATAAGCCAAAATATGAGT+TGG | - | chr1.2:63677377-63677396 | MS.gene07431:CDS | 25.0% |
| ! | TTATATTTGGTCTAAACATC+AGG | - | chr1.2:63675107-63675126 | MS.gene07431:intron | 25.0% |
| ! | TTCTTGCATCTCTTATAATT+TGG | - | chr1.2:63675607-63675626 | MS.gene07431:CDS | 25.0% |
| !! | AAACTTATTCCCTGATTTTA+TGG | - | chr1.2:63677940-63677959 | MS.gene07431:intron | 25.0% |
| !! | AATGAGTGAAACAAATTTTC+AGG | + | chr1.2:63676465-63676484 | None:intergenic | 25.0% |
| !! | ACATATTTACATCCTTTTAC+TGG | + | chr1.2:63677200-63677219 | None:intergenic | 25.0% |
| !! | ATAATACTTCAAGTTCTAAC+CGG | - | chr1.2:63675014-63675033 | MS.gene07431:intron | 25.0% |
| !! | CATAAAACCAACTCATATTT+TGG | + | chr1.2:63677387-63677406 | None:intergenic | 25.0% |
| !! | GGTATAAACTTATACTTTTG+TGG | + | chr1.2:63677755-63677774 | None:intergenic | 25.0% |
| !! | TCAATATGTTGCTTATTTCA+GGG | - | chr1.2:63676278-63676297 | MS.gene07431:CDS | 25.0% |
| !! | TTTTCTGGGTATATTATGAT+AGG | + | chr1.2:63678189-63678208 | None:intergenic | 25.0% |
| !!! | AAGCTGTTTTAACAAATTCT+CGG | - | chr1.2:63675393-63675412 | MS.gene07431:intron | 25.0% |
| !!! | AATAAGCAACATATTGACTT+TGG | + | chr1.2:63676275-63676294 | None:intergenic | 25.0% |
| !!! | ATCTCAACTTTTTAAAAAGG+GGG | + | chr1.2:63676146-63676165 | None:intergenic | 25.0% |
| !!! | CTTTTCATTTATTTTGGTTG+TGG | - | chr1.2:63677603-63677622 | MS.gene07431:intron | 25.0% |
| !!! | GATCTCAACTTTTTAAAAAG+GGG | + | chr1.2:63676147-63676166 | None:intergenic | 25.0% |
| !!! | GATTAGTTTTGTTGATTGTT+TGG | - | chr1.2:63677272-63677291 | MS.gene07431:intron | 25.0% |
| !!! | GGATCTCAACTTTTTAAAAA+GGG | + | chr1.2:63676148-63676167 | None:intergenic | 25.0% |
| !!! | GTAGTTATATCGATTTTATG+TGG | - | chr1.2:63676249-63676268 | MS.gene07431:CDS | 25.0% |
| !!! | TGATCTATAACACTACTTTT+AGG | + | chr1.2:63675754-63675773 | None:intergenic | 25.0% |
| ACACTAATGTAATCCTAGTT+TGG | + | chr1.2:63677832-63677851 | None:intergenic | 30.0% | |
| AGATGAATTTCACAAAAGAG+TGG | - | chr1.2:63675691-63675710 | MS.gene07431:intron | 30.0% | |
| AGCCCATGATCTATTATAAA+TGG | - | chr1.2:63675471-63675490 | MS.gene07431:intron | 30.0% | |
| AGGCCTTTACGAATTTATTA+TGG | - | chr1.2:63676330-63676349 | MS.gene07431:CDS | 30.0% | |
| ATAAATATGCTCTGGTCATA+TGG | - | chr1.2:63678147-63678166 | MS.gene07431:intron | 30.0% | |
| ATAAATGACTCAATGAAGCT+AGG | + | chr1.2:63676170-63676189 | None:intergenic | 30.0% | |
| ATATAGATGACAAACCATTG+TGG | + | chr1.2:63677173-63677192 | None:intergenic | 30.0% | |
| ATATAGATGTGCATCATTCA+TGG | - | chr1.2:63674969-63674988 | MS.gene07431:intron | 30.0% | |
| ATCAAGAAATCAAATGTTGG+AGG | + | chr1.2:63676698-63676717 | None:intergenic | 30.0% | |
| ATGTTATTAACAGAAAACGG+TGG | + | chr1.2:63677105-63677124 | None:intergenic | 30.0% | |
| CAATCTAATAAAGCAAATGG+AGG | + | chr1.2:63676595-63676614 | None:intergenic | 30.0% | |
| CACCAATCTAATAAAGCAAA+TGG | + | chr1.2:63676598-63676617 | None:intergenic | 30.0% | |
| CATCAGGTTATATTGGATTT+GGG | - | chr1.2:63674400-63674419 | MS.gene07431:intron | 30.0% | |
| CATTCTTCATCAGGTTATAT+TGG | - | chr1.2:63674393-63674412 | MS.gene07431:intron | 30.0% | |
| CCATCCATCATATTGTTATA+TGG | - | chr1.2:63677058-63677077 | MS.gene07431:intron | 30.0% | |
| CCATTATCTAAGAAATTCTG+AGG | - | chr1.2:63674462-63674481 | MS.gene07431:intron | 30.0% | |
| CCTCAGAATTTCTTAGATAA+TGG | + | chr1.2:63674465-63674484 | None:intergenic | 30.0% | |
| CTTATAATTTGGATTCTTCC+AGG | - | chr1.2:63675618-63675637 | MS.gene07431:CDS | 30.0% | |
| GAAAGTTGTAAGAAAGGAAA+TGG | + | chr1.2:63674117-63674136 | None:intergenic | 30.0% | |
| GATCATAAACCATGTCAATA+TGG | + | chr1.2:63674908-63674927 | None:intergenic | 30.0% | |
| GCTTTCATTAACTTCACATT+GGG | - | chr1.2:63678013-63678032 | MS.gene07431:intron | 30.0% | |
| GTATAAGTTTATACCTAGCA+TGG | - | chr1.2:63677760-63677779 | MS.gene07431:intron | 30.0% | |
| GTGATTATAGTAGATGAGAT+TGG | - | chr1.2:63675953-63675972 | MS.gene07431:intron | 30.0% | |
| GTTGATACCAGTAATGAAAT+TGG | - | chr1.2:63675815-63675834 | MS.gene07431:intron | 30.0% | |
| GTTTATGATCTGCTTCAATA+TGG | - | chr1.2:63674918-63674937 | MS.gene07431:intron | 30.0% | |
| TAAATGACTCAATGAAGCTA+GGG | + | chr1.2:63676169-63676188 | None:intergenic | 30.0% | |
| TAATGTAATCCTAGTTTGGA+CGG | + | chr1.2:63677828-63677847 | None:intergenic | 30.0% | |
| TATAACCTGATGAAGAATGA+AGG | + | chr1.2:63674392-63674411 | None:intergenic | 30.0% | |
| TATGATAATCAAAACGAACC+AGG | + | chr1.2:63676093-63676112 | None:intergenic | 30.0% | |
| TCAGCCATATAACAATATGA+TGG | + | chr1.2:63677065-63677084 | None:intergenic | 30.0% | |
| TCATAATATACCCAGAAAAG+TGG | - | chr1.2:63678190-63678209 | MS.gene07431:intron | 30.0% | |
| TCATCAGGTTATATTGGATT+TGG | - | chr1.2:63674399-63674418 | MS.gene07431:intron | 30.0% | |
| TGAATTCTTTCAAATTGGGT+AGG | - | chr1.2:63675787-63675806 | MS.gene07431:intron | 30.0% | |
| TGCTTTCATTAACTTCACAT+TGG | - | chr1.2:63678012-63678031 | MS.gene07431:intron | 30.0% | |
| TGTTATTAACAGAAAACGGT+GGG | + | chr1.2:63677104-63677123 | None:intergenic | 30.0% | |
| ! | AAATCAGGGAATAAGTTTTG+TGG | + | chr1.2:63677938-63677957 | None:intergenic | 30.0% |
| ! | AATCGTCTAAAATATGATGC+AGG | + | chr1.2:63677256-63677275 | None:intergenic | 30.0% |
| ! | AATGGTTTGTCATCTATATC+GGG | - | chr1.2:63677174-63677193 | MS.gene07431:intron | 30.0% |
| ! | AATTCAATGATGTGTTGTTG+CGG | + | chr1.2:63674304-63674323 | None:intergenic | 30.0% |
| ! | ATTTGACATACATTTGGTGA+AGG | - | chr1.2:63676910-63676929 | MS.gene07431:intron | 30.0% |
| ! | CAATATATCTACGCTTTTGT+CGG | + | chr1.2:63677445-63677464 | None:intergenic | 30.0% |
| ! | CAATGGTTTGTCATCTATAT+CGG | - | chr1.2:63677173-63677192 | MS.gene07431:intron | 30.0% |
| ! | CATTTGCTTTATTAGATTGG+TGG | - | chr1.2:63676596-63676615 | MS.gene07431:intron | 30.0% |
| ! | CCATATAACAATATGATGGA+TGG | + | chr1.2:63677061-63677080 | None:intergenic | 30.0% |
| ! | CTCCATTTGCTTTATTAGAT+TGG | - | chr1.2:63676593-63676612 | MS.gene07431:intron | 30.0% |
| ! | GTCAATATGTTGCTTATTTC+AGG | - | chr1.2:63676277-63676296 | MS.gene07431:CDS | 30.0% |
| ! | TTAGTCTAGTGGAATTGTTT+TGG | - | chr1.2:63677312-63677331 | MS.gene07431:intron | 30.0% |
| ! | TTTGACATACATTTGGTGAA+GGG | - | chr1.2:63676911-63676930 | MS.gene07431:intron | 30.0% |
| ! | TTTGGTTCATAAATATGCTC+TGG | - | chr1.2:63678139-63678158 | MS.gene07431:intron | 30.0% |
| ! | TTTTGTGTGTGTTAAAGACT+TGG | - | chr1.2:63675135-63675154 | MS.gene07431:intron | 30.0% |
| !! | AGAAATTCTGAGGTAAAAGT+AGG | - | chr1.2:63674472-63674491 | MS.gene07431:intron | 30.0% |
| !! | AGAGCATTTTATTTCTTGGA+AGG | - | chr1.2:63674943-63674962 | MS.gene07431:intron | 30.0% |
| !! | GGGATCTCAACTTTTTAAAA+AGG | + | chr1.2:63676149-63676168 | None:intergenic | 30.0% |
| !! | TCTCAACTTTTTAAAAAGGG+GGG | + | chr1.2:63676145-63676164 | None:intergenic | 30.0% |
| !!! | AAACGGACTTTTTTAAGATG+TGG | + | chr1.2:63674527-63674546 | None:intergenic | 30.0% |
| !!! | GACTATTTGATTTTTGGTTG+AGG | - | chr1.2:63677671-63677690 | MS.gene07431:intron | 30.0% |
| AAGTTTATACCTAGCATGGT+TGG | - | chr1.2:63677764-63677783 | MS.gene07431:intron | 35.0% | |
| AATATTCCTCATGCAGCAAT+AGG | - | chr1.2:63675848-63675867 | MS.gene07431:intron | 35.0% | |
| AATGTAATCCTAGTTTGGAC+GGG | + | chr1.2:63677827-63677846 | None:intergenic | 35.0% | |
| AATTAGTAACAAAGAGACCG+TGG | - | chr1.2:63676861-63676880 | MS.gene07431:intron | 35.0% | |
| ACTAGGATTACATTAGTGTG+TGG | - | chr1.2:63677833-63677852 | MS.gene07431:CDS | 35.0% | |
| AGAAAGGAAATGGTTGAGAA+TGG | + | chr1.2:63674107-63674126 | None:intergenic | 35.0% | |
| AGATTGTGATGCAAATCTGA+AGG | + | chr1.2:63674165-63674184 | None:intergenic | 35.0% | |
| AGTAATGAAATTGGAGGTGA+TGG | - | chr1.2:63675824-63675843 | MS.gene07431:intron | 35.0% | |
| AGTAGAAAATCATATGCCTG+AGG | - | chr1.2:63675931-63675950 | MS.gene07431:intron | 35.0% | |
| ATCACCTCCAATTTCATTAC+TGG | + | chr1.2:63675825-63675844 | None:intergenic | 35.0% | |
| CATTGCAAATTAGGGGTTAT+AGG | + | chr1.2:63677883-63677902 | None:intergenic | 35.0% | |
| CCGGATACTTGAAATGAAAT+CGG | - | chr1.2:63675033-63675052 | MS.gene07431:intron | 35.0% | |
| CTTCTGGTAATAGCTAGTAA+AGG | - | chr1.2:63676934-63676953 | MS.gene07431:intron | 35.0% | |
| GAATATCAGCAATAAGGAGT+AGG | - | chr1.2:63674832-63674851 | MS.gene07431:CDS | 35.0% | |
| GACTATCCAATTATTCACCA+CGG | + | chr1.2:63676881-63676900 | None:intergenic | 35.0% | |
| GATACCAGTAATGAAATTGG+AGG | - | chr1.2:63675818-63675837 | MS.gene07431:intron | 35.0% | |
| GCTCTTCATAAACTCTAATC+CGG | + | chr1.2:63674498-63674517 | None:intergenic | 35.0% | |
| GGCATAGCATTTGAATTTGA+GGG | + | chr1.2:63674000-63674019 | None:intergenic | 35.0% | |
| GGGGTTATAGGAAATATAGA+TGG | + | chr1.2:63677871-63677890 | None:intergenic | 35.0% | |
| TAGCATTTGAATTTGAGGGT+CGG | + | chr1.2:63673996-63674015 | None:intergenic | 35.0% | |
| TCATCTACTATAATCACCTC+AGG | + | chr1.2:63675950-63675969 | None:intergenic | 35.0% | |
| TGCACAGAATATCAGCAATA+AGG | - | chr1.2:63674826-63674845 | MS.gene07431:CDS | 35.0% | |
| TGGTTGAGGTTTAGATGAAA+AGG | - | chr1.2:63677685-63677704 | MS.gene07431:intron | 35.0% | |
| TTAAAGACATGCTTGATGTG+TGG | - | chr1.2:63676522-63676541 | MS.gene07431:intron | 35.0% | |
| TTGAACCTTCATTCTTCATC+AGG | - | chr1.2:63674384-63674403 | MS.gene07431:intron | 35.0% | |
| TTGCTTATTTCAGGGTCTAA+AGG | - | chr1.2:63676286-63676305 | MS.gene07431:CDS | 35.0% | |
| TTGTGATATGATCTCATGTG+TGG | - | chr1.2:63674705-63674724 | MS.gene07431:intron | 35.0% | |
| TTGTTTCACTCATTCAGTTG+AGG | - | chr1.2:63676471-63676490 | MS.gene07431:CDS | 35.0% | |
| ! | AGCATACATGTTGCATGTTT+TGG | + | chr1.2:63677996-63678015 | None:intergenic | 35.0% |
| ! | CCGATTTCATTTCAAGTATC+CGG | + | chr1.2:63675036-63675055 | None:intergenic | 35.0% |
| ! | GATAATAGAGCTGGTATTGA+AGG | - | chr1.2:63674798-63674817 | MS.gene07431:intron | 35.0% |
| ! | TATGTTCCAAGGTTTAGAGT+TGG | - | chr1.2:63678075-63678094 | MS.gene07431:intron | 35.0% |
| !! | AAAAAAAAGTGCTGCCACAA+TGG | - | chr1.2:63677156-63677175 | MS.gene07431:intron | 35.0% |
| !! | AGAGTTGGTGTGTGATAAAT+CGG | - | chr1.2:63678090-63678109 | MS.gene07431:intron | 35.0% |
| !! | GGAATTGAAAGTGTTACTCT+GGG | - | chr1.2:63676617-63676636 | MS.gene07431:CDS | 35.0% |
| !! | TGGAATTGAAAGTGTTACTC+TGG | - | chr1.2:63676616-63676635 | MS.gene07431:CDS | 35.0% |
| !!! | ATGTCTCGTAACTTTTTTGC+AGG | - | chr1.2:63678312-63678331 | MS.gene07431:CDS | 35.0% |
| !!! | GGCAAGAGCATTTTATTTCT+TGG | - | chr1.2:63674939-63674958 | MS.gene07431:intron | 35.0% |
| AAGAATTACCTCAACCTGTG+GGG | + | chr1.2:63677481-63677500 | None:intergenic | 40.0% | |
| AAGAGACCGTGGTGAATAAT+TGG | - | chr1.2:63676872-63676891 | MS.gene07431:intron | 40.0% | |
| ACAATTAACAGCGCCAAACA+TGG | + | chr1.2:63675167-63675186 | None:intergenic | 40.0% | |
| AGAGAGTTGGAATATGCTGA+AGG | - | chr1.2:63674753-63674772 | MS.gene07431:intron | 40.0% | |
| AGATGAGAGATAGACACTAC+TGG | - | chr1.2:63676720-63676739 | MS.gene07431:intron | 40.0% | |
| AGCGTAGATATATTGCTTCG+AGG | - | chr1.2:63677450-63677469 | MS.gene07431:CDS | 40.0% | |
| ATCACGCTATGTTGCATTGA+TGG | + | chr1.2:63675902-63675921 | None:intergenic | 40.0% | |
| ATCTATATCGGGCCAGTAAA+AGG | - | chr1.2:63677185-63677204 | MS.gene07431:intron | 40.0% | |
| CGGCATAGCATTTGAATTTG+AGG | + | chr1.2:63674001-63674020 | None:intergenic | 40.0% | |
| CTAGGTAACAATGAGAGAGT+TGG | - | chr1.2:63674740-63674759 | MS.gene07431:intron | 40.0% | |
| GAAGAATTACCTCAACCTGT+GGG | + | chr1.2:63677482-63677501 | None:intergenic | 40.0% | |
| GATGAGAGATAGACACTACT+GGG | - | chr1.2:63676721-63676740 | MS.gene07431:intron | 40.0% | |
| GGTCCTGAACTAAAAAGTGA+GGG | - | chr1.2:63677333-63677352 | MS.gene07431:intron | 40.0% | |
| GTCAGAAGACTATTCTTGAG+AGG | - | chr1.2:63676666-63676685 | MS.gene07431:intron | 40.0% | |
| GTGTGTGATAAATCGGAGTA+TGG | - | chr1.2:63678097-63678116 | MS.gene07431:CDS | 40.0% | |
| TCAGCAATAAGGAGTAGGAA+TGG | - | chr1.2:63674837-63674856 | MS.gene07431:CDS | 40.0% | |
| TGAAGAATTACCTCAACCTG+TGG | + | chr1.2:63677483-63677502 | None:intergenic | 40.0% | |
| TGATATGATCTCATGTGTGG+AGG | - | chr1.2:63674708-63674727 | MS.gene07431:intron | 40.0% | |
| TGGTCCTGAACTAAAAAGTG+AGG | - | chr1.2:63677332-63677351 | MS.gene07431:intron | 40.0% | |
| TTGCAAATGCAATGGCATGT+TGG | - | chr1.2:63673913-63673932 | MS.gene07431:CDS | 40.0% | |
| TTTGGGAAGGATAATAGAGC+TGG | - | chr1.2:63674789-63674808 | MS.gene07431:intron | 40.0% | |
| ! | AAGGAGCAGTTGGAGATTTT+GGG | - | chr1.2:63674772-63674791 | MS.gene07431:intron | 40.0% |
| ! | CTTCTGACATTTTCTTGCTC+TGG | + | chr1.2:63676654-63676673 | None:intergenic | 40.0% |
| ! | GTGTGTGTTAAAGACTTGGT+CGG | - | chr1.2:63675139-63675158 | MS.gene07431:intron | 40.0% |
| !! | ATTCTGAGGTAAAAGTAGGC+CGG | - | chr1.2:63674476-63674495 | MS.gene07431:intron | 40.0% |
| !!! | GTACCCTCACTTTTTAGTTC+AGG | + | chr1.2:63677339-63677358 | None:intergenic | 40.0% |
| AATTTGGATTCTTCCAGGCC+TGG | - | chr1.2:63675623-63675642 | MS.gene07431:CDS | 45.0% | |
| ACAAGAGAACACTGTGACTG+TGG | + | chr1.2:63674038-63674057 | None:intergenic | 45.0% | |
| ACACTACTGGGTTACACATC+AGG | - | chr1.2:63676733-63676752 | MS.gene07431:intron | 45.0% | |
| AGGAAAAGACCAACCATGCT+AGG | + | chr1.2:63677776-63677795 | None:intergenic | 45.0% | |
| AGTAGGAATGGTGGCATTGT+TGG | - | chr1.2:63674849-63674868 | MS.gene07431:CDS | 45.0% | |
| ATGCTTATAGGGACTGCTCA+TGG | - | chr1.2:63676025-63676044 | MS.gene07431:intron | 45.0% | |
| ATTCCTCATGCAGCAATAGG+TGG | - | chr1.2:63675851-63675870 | MS.gene07431:intron | 45.0% | |
| ATTTGGATTCTTCCAGGCCT+GGG | - | chr1.2:63675624-63675643 | MS.gene07431:CDS | 45.0% | |
| CACACACCAACTCTAAACCT+TGG | + | chr1.2:63678084-63678103 | None:intergenic | 45.0% | |
| CAGAAAACGGTGGGATGATA+TGG | + | chr1.2:63677095-63677114 | None:intergenic | 45.0% | |
| CATTTGAATTTGAGGGTCGG+TGG | + | chr1.2:63673993-63674012 | None:intergenic | 45.0% | |
| CTAAAGGCCTGCTTATACCA+GGG | - | chr1.2:63676302-63676321 | MS.gene07431:CDS | 45.0% | |
| CTGCTTATACCAGGGTCTAA+AGG | - | chr1.2:63676310-63676329 | MS.gene07431:CDS | 45.0% | |
| CTTTAGACCCTGGTATAAGC+AGG | + | chr1.2:63676312-63676331 | None:intergenic | 45.0% | |
| GAATATGCTGAAGGAGCAGT+TGG | - | chr1.2:63674762-63674781 | MS.gene07431:intron | 45.0% | |
| GACCTACCTCCAAAAGTTGA+GGG | + | chr1.2:63674206-63674225 | None:intergenic | 45.0% | |
| GACGGGAAGAATGAGAATTC+GGG | + | chr1.2:63677810-63677829 | None:intergenic | 45.0% | |
| GATACCACGCTTCAGGAAAA+CGG | + | chr1.2:63674426-63674445 | None:intergenic | 45.0% | |
| GCAACATAGCGTGATGATTG+AGG | - | chr1.2:63675907-63675926 | MS.gene07431:intron | 45.0% | |
| GCAATAAGGAGTAGGAATGG+TGG | - | chr1.2:63674840-63674859 | MS.gene07431:CDS | 45.0% | |
| GGACGGGAAGAATGAGAATT+CGG | + | chr1.2:63677811-63677830 | None:intergenic | 45.0% | |
| GGCATGTTGGTCATGTTTGA+TGG | - | chr1.2:63673926-63673945 | MS.gene07431:CDS | 45.0% | |
| GTAGTACCTGTAAGAGAGCT+TGG | + | chr1.2:63674076-63674095 | None:intergenic | 45.0% | |
| TAACTCTAGTCAGAGGATGC+TGG | - | chr1.2:63676384-63676403 | MS.gene07431:CDS | 45.0% | |
| TCATTCTTCCCGTCCAAACT+AGG | - | chr1.2:63677816-63677835 | MS.gene07431:intron | 45.0% | |
| TCTAAAGGCCTGCTTATACC+AGG | - | chr1.2:63676301-63676320 | MS.gene07431:CDS | 45.0% | |
| TGTCACTGGCCATATTGACA+TGG | - | chr1.2:63674896-63674915 | MS.gene07431:intron | 45.0% | |
| TTTCCTGAAGCGTGGTATCT+AGG | - | chr1.2:63674427-63674446 | MS.gene07431:intron | 45.0% | |
| ! | AGCGAGGCATCATGCTTATA+GGG | - | chr1.2:63676014-63676033 | MS.gene07431:intron | 45.0% |
| ! | GAAGGAGCAGTTGGAGATTT+TGG | - | chr1.2:63674771-63674790 | MS.gene07431:intron | 45.0% |
| ! | GCTATGTTGCATTGATGGCT+CGG | + | chr1.2:63675897-63675916 | None:intergenic | 45.0% |
| ! | TACATTTGGTGAAGGGCTTC+TGG | - | chr1.2:63676918-63676937 | MS.gene07431:intron | 45.0% |
| ! | TTGGTTTGACGTGTCGGATT+GGG | - | chr1.2:63674868-63674887 | MS.gene07431:intron | 45.0% |
| !! | AGCAGTTGGAGATTTTGGGA+AGG | - | chr1.2:63674776-63674795 | MS.gene07431:intron | 45.0% |
| !! | CATTGGCTCAAAGCTCAATG+TGG | - | chr1.2:63677220-63677239 | MS.gene07431:intron | 45.0% |
| !! | GCATTGTTGGTTTGACGTGT+CGG | - | chr1.2:63674862-63674881 | MS.gene07431:intron | 45.0% |
| !!! | ACTTTCTAGGGCCACTTTTC+TGG | + | chr1.2:63678204-63678223 | None:intergenic | 45.0% |
| !!! | CATGGTTGGTCTTTTCCTCA+TGG | - | chr1.2:63677778-63677797 | MS.gene07431:intron | 45.0% |
| !!! | CTTTCTAGGGCCACTTTTCT+GGG | + | chr1.2:63678203-63678222 | None:intergenic | 45.0% |
| AAAGTTGAGGGCGGTTAGGT+TGG | + | chr1.2:63674194-63674213 | None:intergenic | 50.0% | |
| AAGCTGAAGCTCATGCATGC+CGG | - | chr1.2:63675981-63676000 | MS.gene07431:intron | 50.0% | |
| CAGCAACAACAGCAGCATCA+TGG | - | chr1.2:63673955-63673974 | MS.gene07431:CDS | 50.0% | |
| CTACCTCCAAAAGTTGAGGG+CGG | + | chr1.2:63674203-63674222 | None:intergenic | 50.0% | |
| GAATTCGGGCAAAAGCCATG+AGG | + | chr1.2:63677796-63677815 | None:intergenic | 50.0% | |
| GCGTGGTATCTAGGCAAACA+CGG | - | chr1.2:63674436-63674455 | MS.gene07431:intron | 50.0% | |
| GGACCTACCTCCAAAAGTTG+AGG | + | chr1.2:63674207-63674226 | None:intergenic | 50.0% | |
| GTACCTGTAAGAGAGCTTGG+AGG | + | chr1.2:63674073-63674092 | None:intergenic | 50.0% | |
| GTGTGGAGGAATGTGTAGCT+AGG | - | chr1.2:63674722-63674741 | MS.gene07431:intron | 50.0% | |
| TCCAAAAGTTGAGGGCGGTT+AGG | + | chr1.2:63674198-63674217 | None:intergenic | 50.0% | |
| TCGTAAAGGCCTTTAGACCC+TGG | + | chr1.2:63676322-63676341 | None:intergenic | 50.0% | |
| TTGCCTAGATACCACGCTTC+AGG | + | chr1.2:63674433-63674452 | None:intergenic | 50.0% | |
| TTTGGATTCTTCCAGGCCTG+GGG | - | chr1.2:63675625-63675644 | MS.gene07431:CDS | 50.0% | |
| ! | ACCTAACCGCCCTCAACTTT+TGG | - | chr1.2:63674194-63674213 | MS.gene07431:intron | 50.0% |
| ! | GACTTGGTCGGTTCCATGTT+TGG | - | chr1.2:63675151-63675170 | MS.gene07431:intron | 50.0% |
| ! | GAGCGAGGCATCATGCTTAT+AGG | - | chr1.2:63676013-63676032 | MS.gene07431:intron | 50.0% |
| ! | TAACCGCCCTCAACTTTTGG+AGG | - | chr1.2:63674197-63674216 | MS.gene07431:intron | 50.0% |
| ! | TTTGACGTGTCGGATTGGGA+GGG | - | chr1.2:63674872-63674891 | MS.gene07431:intron | 50.0% |
| !! | GTTGGTTTGACGTGTCGGAT+TGG | - | chr1.2:63674867-63674886 | MS.gene07431:intron | 50.0% |
| AGGTGGTGCACGTAGAATGC+AGG | - | chr1.2:63675868-63675887 | MS.gene07431:intron | 55.0% | |
| CGACCTCCAAGCTCTCTTAC+AGG | - | chr1.2:63674067-63674086 | MS.gene07431:intron | 55.0% | |
| GAACACTGTGACTGTGGCTG+TGG | + | chr1.2:63674032-63674051 | None:intergenic | 55.0% | |
| GAATCCTACGCTCTCTGACC+TGG | - | chr1.2:63676072-63676091 | MS.gene07431:intron | 55.0% | |
| GCACCACCTATTGCTGCATG+AGG | + | chr1.2:63675857-63675876 | None:intergenic | 55.0% | |
| ! | ACAGTAGTCTTGCCAACCCC+AGG | + | chr1.2:63675644-63675663 | None:intergenic | 55.0% |
| ! | GTTTGACGTGTCGGATTGGG+AGG | - | chr1.2:63674871-63674890 | MS.gene07431:intron | 55.0% |
| !! | CGCCCTCAACTTTTGGAGGT+AGG | - | chr1.2:63674201-63674220 | MS.gene07431:intron | 55.0% |
| AGGCAAGACCCCACAGGTTG+AGG | - | chr1.2:63677470-63677489 | MS.gene07431:CDS | 60.0% | |
| GATTCTTCCAGGCCTGGGGT+TGG | - | chr1.2:63675629-63675648 | MS.gene07431:CDS | 60.0% | |
| TGCCTCGCTCAGCAATCGAC+CGG | + | chr1.2:63676003-63676022 | None:intergenic | 60.0% | |
| ! | CGAACCAGGTCAGAGAGCGT+AGG | + | chr1.2:63676079-63676098 | None:intergenic | 60.0% |
| !! | TGGGCCGTTTTCCTGAAGCG+TGG | - | chr1.2:63674419-63674438 | MS.gene07431:intron | 60.0% |
| AGTCTTGCCAACCCCAGGCC+TGG | + | chr1.2:63675639-63675658 | None:intergenic | 65.0% | |
| CTGTGGCTGTGGCTGAGTCG+CGG | + | chr1.2:63674021-63674040 | None:intergenic | 65.0% | |
| GCTTCGAGGCAAGACCCCAC+AGG | - | chr1.2:63677464-63677483 | MS.gene07431:CDS | 65.0% | |
| TGCCGGTCGATTGCTGAGCG+AGG | - | chr1.2:63675998-63676017 | MS.gene07431:intron | 65.0% | |
| ! | CGGATTGGGAGGGCTGTCAC+TGG | - | chr1.2:63674882-63674901 | MS.gene07431:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 63673906 | 63678405 | 63673906 | ID=MS.gene07431 |
| chr1.2 | mRNA | 63673906 | 63678405 | 63673906 | ID=MS.gene07431.t1;Parent=MS.gene07431 |
| chr1.2 | exon | 63678223 | 63678405 | 63678223 | ID=MS.gene07431.t1.exon1;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63678223 | 63678405 | 63678223 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63678093 | 63678155 | 63678093 | ID=MS.gene07431.t1.exon2;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63678093 | 63678155 | 63678093 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63677828 | 63677905 | 63677828 | ID=MS.gene07431.t1.exon3;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63677828 | 63677905 | 63677828 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63677347 | 63677567 | 63677347 | ID=MS.gene07431.t1.exon4;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63677347 | 63677567 | 63677347 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63676599 | 63676671 | 63676599 | ID=MS.gene07431.t1.exon5;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63676599 | 63676671 | 63676599 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63676218 | 63676502 | 63676218 | ID=MS.gene07431.t1.exon6;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63676218 | 63676502 | 63676218 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63675557 | 63675700 | 63675557 | ID=MS.gene07431.t1.exon7;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63675557 | 63675700 | 63675557 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63674820 | 63674870 | 63674820 | ID=MS.gene07431.t1.exon8;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63674820 | 63674870 | 63674820 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| chr1.2 | exon | 63673906 | 63673977 | 63673906 | ID=MS.gene07431.t1.exon9;Parent=MS.gene07431.t1 |
| chr1.2 | CDS | 63673906 | 63673977 | 63673906 | ID=cds.MS.gene07431.t1;Parent=MS.gene07431.t1 |
| Gene Sequence |
| Protein sequence |
