Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39360.t1 | KEH17976.1 | 92.6 | 175 | 13 | 0 | 1 | 175 | 1 | 175 | 7.40E-91 | 343.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39360.t1 | Q9LTH7 | 54.5 | 167 | 68 | 5 | 15 | 175 | 12 | 176 | 1.4e-45 | 184.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39360.t1 | G7LCM1 | 92.6 | 175 | 13 | 0 | 1 | 175 | 1 | 175 | 5.3e-91 | 343.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene39360 | 0.82187 | 3.21E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene39360 | 0.816848 | 4.47E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene39360 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene39360 | 0.818007 | 2.45E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene39360 | 0.925919 | 9.54E-91 | -1.69E-46 |
| MS.gene049369 | MS.gene39360 | 0.911373 | 6.54E-83 | -1.69E-46 |
| MS.gene049396 | MS.gene39360 | 0.819013 | 1.45E-52 | -1.69E-46 |
| MS.gene049661 | MS.gene39360 | 0.850002 | 2.25E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene39360 | 0.84124 | 5.36E-58 | -1.69E-46 |
| MS.gene049681 | MS.gene39360 | 0.807658 | 4.54E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene39360 | 0.838026 | 3.67E-57 | -1.69E-46 |
| MS.gene049907 | MS.gene39360 | 0.810445 | 1.15E-50 | -1.69E-46 |
| MS.gene050122 | MS.gene39360 | 0.833016 | 6.79E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene39360 | 0.855894 | 4.64E-62 | -1.69E-46 |
| MS.gene050301 | MS.gene39360 | 0.859093 | 5.25E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene39360 | 0.83793 | 3.89E-57 | -1.69E-46 |
| MS.gene050432 | MS.gene39360 | 0.839356 | 1.66E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene39360 | 0.816882 | 4.40E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene39360 | 0.807081 | 6.02E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene39360 | 0.868153 | 8.07E-66 | -1.69E-46 |
| MS.gene050971 | MS.gene39360 | 0.85338 | 2.48E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene39360 | 0.868662 | 5.53E-66 | -1.69E-46 |
| MS.gene051255 | MS.gene39360 | 0.833165 | 6.24E-56 | -1.69E-46 |
| MS.gene051360 | MS.gene39360 | 0.85201 | 6.11E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene39360 | 0.817937 | 2.55E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene39360 | 0.815838 | 7.53E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene39360 | 0.822043 | 2.93E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene39360 | -0.810538 | 1.10E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene39360 | 0.833382 | 5.51E-56 | -1.69E-46 |
| MS.gene052078 | MS.gene39360 | 0.810563 | 1.08E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene39360 | 0.824563 | 7.54E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene39360 | 0.80987 | 1.53E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene39360 | 0.90719 | 6.63E-81 | -1.69E-46 |
| MS.gene052253 | MS.gene39360 | 0.863471 | 2.43E-64 | -1.69E-46 |
| MS.gene052255 | MS.gene39360 | 0.811202 | 7.88E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene39360 | 0.850834 | 1.31E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene39360 | 0.808302 | 3.31E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene39360 | 0.878897 | 1.94E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene39360 | 0.840668 | 7.57E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene39360 | 0.852092 | 5.79E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene39360 | 0.815213 | 1.04E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene39360 | 0.878529 | 2.61E-69 | -1.69E-46 |
| MS.gene053073 | MS.gene39360 | 0.810982 | 8.79E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene39360 | 0.87887 | 1.98E-69 | -1.69E-46 |
| MS.gene053209 | MS.gene39360 | 0.846236 | 2.47E-59 | -1.69E-46 |
| MS.gene053449 | MS.gene39360 | 0.862957 | 3.51E-64 | -1.69E-46 |
| MS.gene053557 | MS.gene39360 | 0.838375 | 2.99E-57 | -1.69E-46 |
| MS.gene053758 | MS.gene39360 | 0.865865 | 4.33E-65 | -1.69E-46 |
| MS.gene053813 | MS.gene39360 | 0.860637 | 1.80E-63 | -1.69E-46 |
| MS.gene053836 | MS.gene39360 | 0.830263 | 3.24E-55 | -1.69E-46 |
| MS.gene053912 | MS.gene39360 | 0.835163 | 1.97E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene39360 | 0.864202 | 1.44E-64 | -1.69E-46 |
| MS.gene054010 | MS.gene39360 | 0.826041 | 3.37E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene39360 | 0.835217 | 1.91E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene39360 | 0.830858 | 2.32E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene39360 | 0.829735 | 4.36E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene39360 | 0.870982 | 9.67E-67 | -1.69E-46 |
| MS.gene054183 | MS.gene39360 | 0.823106 | 1.66E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene39360 | 0.860407 | 2.11E-63 | -1.69E-46 |
| MS.gene054556 | MS.gene39360 | 0.811671 | 6.23E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene39360 | 0.802079 | 6.65E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene39360 | 0.815973 | 7.03E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene39360 | 0.850053 | 2.18E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene39360 | 0.890231 | 1.19E-73 | -1.69E-46 |
| MS.gene055277 | MS.gene39360 | 0.852673 | 3.96E-61 | -1.69E-46 |
| MS.gene055369 | MS.gene39360 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene39360 | 0.821097 | 4.84E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene39360 | 0.830909 | 2.25E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene39360 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene39360 | 0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene39360 | 0.856725 | 2.65E-62 | -1.69E-46 |
| MS.gene055666 | MS.gene39360 | 0.829923 | 3.92E-55 | -1.69E-46 |
| MS.gene055741 | MS.gene39360 | 0.816989 | 4.16E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene39360 | 0.821979 | 3.03E-53 | -1.69E-46 |
| MS.gene055802 | MS.gene39360 | 0.814991 | 1.16E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene39360 | 0.85215 | 5.57E-61 | -1.69E-46 |
| MS.gene055911 | MS.gene39360 | 0.856016 | 4.28E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene39360 | 0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene39360 | 0.853438 | 2.39E-61 | -1.69E-46 |
| MS.gene056407 | MS.gene39360 | 0.864668 | 1.03E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene39360 | 0.837362 | 5.43E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene39360 | 0.83543 | 1.69E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene39360 | 0.876475 | 1.36E-68 | -1.69E-46 |
| MS.gene056609 | MS.gene39360 | 0.867761 | 1.08E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene39360 | 0.805237 | 1.47E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene39360 | 0.830321 | 3.14E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene39360 | 0.876645 | 1.18E-68 | -1.69E-46 |
| MS.gene05666 | MS.gene39360 | 0.833139 | 6.33E-56 | -1.69E-46 |
| MS.gene056719 | MS.gene39360 | 0.806649 | 7.43E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene39360 | 0.814888 | 1.22E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene39360 | 0.828243 | 1.00E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene39360 | 0.861666 | 8.74E-64 | -1.69E-46 |
| MS.gene057076 | MS.gene39360 | 0.818506 | 1.89E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene39360 | 0.854433 | 1.24E-61 | -1.69E-46 |
| MS.gene05735 | MS.gene39360 | 0.856788 | 2.54E-62 | -1.69E-46 |
| MS.gene057396 | MS.gene39360 | 0.871529 | 6.37E-67 | -1.69E-46 |
| MS.gene057448 | MS.gene39360 | 0.880655 | 4.59E-70 | -1.69E-46 |
| MS.gene057449 | MS.gene39360 | 0.866806 | 2.18E-65 | -1.69E-46 |
| MS.gene057450 | MS.gene39360 | 0.880167 | 6.86E-70 | -1.69E-46 |
| MS.gene057469 | MS.gene39360 | 0.80911 | 2.23E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene39360 | 0.855516 | 5.99E-62 | -1.69E-46 |
| MS.gene057610 | MS.gene39360 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene39360 | 0.830652 | 2.60E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene39360 | 0.869056 | 4.12E-66 | -1.69E-46 |
| MS.gene057796 | MS.gene39360 | 0.827979 | 1.16E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene39360 | 0.875428 | 3.11E-68 | -1.69E-46 |
| MS.gene057825 | MS.gene39360 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene39360 | 0.814892 | 1.22E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene39360 | 0.879436 | 1.25E-69 | -1.69E-46 |
| MS.gene058002 | MS.gene39360 | 0.837523 | 4.94E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene39360 | 0.848356 | 6.46E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene39360 | 0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene39360 | 0.855086 | 7.99E-62 | -1.69E-46 |
| MS.gene058082 | MS.gene39360 | 0.822642 | 2.12E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene39360 | 0.838816 | 2.30E-57 | -1.69E-46 |
| MS.gene058120 | MS.gene39360 | 0.829578 | 4.76E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene39360 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene39360 | 0.818504 | 1.89E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene39360 | 0.872042 | 4.31E-67 | -1.69E-46 |
| MS.gene05842 | MS.gene39360 | 0.815459 | 9.15E-52 | -1.69E-46 |
| MS.gene058459 | MS.gene39360 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene05858 | MS.gene39360 | 0.80372 | 3.05E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene39360 | 0.844472 | 7.40E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene39360 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene39360 | 0.817978 | 2.49E-52 | -1.69E-46 |
| MS.gene058787 | MS.gene39360 | 0.816672 | 4.90E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene39360 | 0.807983 | 3.87E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene39360 | 0.87672 | 1.12E-68 | -1.69E-46 |
| MS.gene058948 | MS.gene39360 | 0.861088 | 1.31E-63 | -1.69E-46 |
| MS.gene058949 | MS.gene39360 | 0.884114 | 2.53E-71 | -1.69E-46 |
| MS.gene058995 | MS.gene39360 | 0.82123 | 4.51E-53 | -1.69E-46 |
| MS.gene059011 | MS.gene39360 | 0.820456 | 6.79E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene39360 | 0.870292 | 1.63E-66 | -1.69E-46 |
| MS.gene059082 | MS.gene39360 | 0.803577 | 3.26E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene39360 | 0.842869 | 1.99E-58 | -1.69E-46 |
| MS.gene059294 | MS.gene39360 | 0.850704 | 1.43E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene39360 | 0.888692 | 4.71E-73 | -1.69E-46 |
| MS.gene059368 | MS.gene39360 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene39360 | 0.873341 | 1.59E-67 | -1.69E-46 |
| MS.gene059455 | MS.gene39360 | 0.815231 | 1.03E-51 | -1.69E-46 |
| MS.gene059462 | MS.gene39360 | 0.81735 | 3.45E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene39360 | 0.852214 | 5.35E-61 | -1.69E-46 |
| MS.gene05959 | MS.gene39360 | 0.836295 | 1.02E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene39360 | 0.880242 | 6.45E-70 | -1.69E-46 |
| MS.gene059676 | MS.gene39360 | 0.862434 | 5.08E-64 | -1.69E-46 |
| MS.gene059688 | MS.gene39360 | 0.876357 | 1.49E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene39360 | 0.879404 | 1.28E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene39360 | 0.879268 | 1.43E-69 | -1.69E-46 |
| MS.gene059708 | MS.gene39360 | 0.837027 | 6.62E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene39360 | 0.869541 | 2.87E-66 | -1.69E-46 |
| MS.gene059807 | MS.gene39360 | 0.903661 | 2.76E-79 | -1.69E-46 |
| MS.gene05984 | MS.gene39360 | 0.828609 | 8.17E-55 | -1.69E-46 |
| MS.gene05986 | MS.gene39360 | 0.830046 | 3.66E-55 | -1.69E-46 |
| MS.gene059876 | MS.gene39360 | 0.847756 | 9.45E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene39360 | 0.822953 | 1.80E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene39360 | 0.833611 | 4.83E-56 | -1.69E-46 |
| MS.gene060005 | MS.gene39360 | 0.810914 | 9.09E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene39360 | 0.822363 | 2.47E-53 | -1.69E-46 |
| MS.gene060372 | MS.gene39360 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene39360 | 0.877324 | 6.88E-69 | -1.69E-46 |
| MS.gene060403 | MS.gene39360 | 0.841964 | 3.45E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene39360 | 0.87089 | 1.04E-66 | -1.69E-46 |
| MS.gene060496 | MS.gene39360 | 0.84416 | 8.98E-59 | -1.69E-46 |
| MS.gene060569 | MS.gene39360 | 0.838165 | 3.38E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene39360 | 0.849468 | 3.17E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene39360 | 0.823317 | 1.48E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene39360 | 0.831369 | 1.74E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene39360 | 0.870222 | 1.72E-66 | -1.69E-46 |
| MS.gene060971 | MS.gene39360 | 0.800127 | 1.67E-48 | -1.69E-46 |
| MS.gene060986 | MS.gene39360 | 0.819149 | 1.35E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene39360 | 0.857008 | 2.19E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene39360 | 0.879377 | 1.31E-69 | -1.69E-46 |
| MS.gene061051 | MS.gene39360 | -0.888837 | 4.14E-73 | -1.69E-46 |
| MS.gene061154 | MS.gene39360 | 0.860479 | 2.01E-63 | -1.69E-46 |
| MS.gene061159 | MS.gene39360 | 0.816305 | 5.92E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39360.t1 | MTR_8g009170 | 92.571 | 175 | 13 | 0 | 1 | 175 | 1 | 175 | 2.02e-119 | 340 |
| MS.gene39360.t1 | MTR_8g009170 | 92.571 | 175 | 13 | 0 | 1 | 175 | 1 | 175 | 1.15e-118 | 340 |
| MS.gene39360.t1 | MTR_8g009110 | 82.778 | 180 | 31 | 0 | 1 | 180 | 1 | 180 | 1.59e-109 | 317 |
| MS.gene39360.t1 | MTR_8g009150 | 85.143 | 175 | 26 | 0 | 1 | 175 | 1 | 175 | 5.04e-109 | 315 |
| MS.gene39360.t1 | MTR_8g009120 | 85.632 | 174 | 25 | 0 | 1 | 174 | 1 | 174 | 4.62e-108 | 313 |
| MS.gene39360.t1 | MTR_8g009160 | 81.564 | 179 | 32 | 1 | 1 | 179 | 1 | 178 | 1.27e-105 | 307 |
| MS.gene39360.t1 | MTR_8g028435 | 84.571 | 175 | 26 | 1 | 1 | 175 | 1 | 174 | 2.61e-104 | 304 |
| MS.gene39360.t1 | MTR_8g009090 | 81.143 | 175 | 32 | 1 | 1 | 175 | 1 | 174 | 5.60e-102 | 298 |
| MS.gene39360.t1 | MTR_8g008930 | 80.114 | 176 | 33 | 2 | 1 | 175 | 1 | 175 | 7.57e-100 | 292 |
| MS.gene39360.t1 | MTR_4g117880 | 70.556 | 180 | 51 | 2 | 1 | 179 | 1 | 179 | 1.07e-86 | 259 |
| MS.gene39360.t1 | MTR_2g069210 | 60.773 | 181 | 65 | 4 | 2 | 179 | 4 | 181 | 7.99e-72 | 221 |
| MS.gene39360.t1 | MTR_2g069090 | 65.854 | 164 | 51 | 3 | 15 | 175 | 20 | 181 | 1.45e-71 | 221 |
| MS.gene39360.t1 | MTR_2g069190 | 60.714 | 168 | 61 | 3 | 15 | 179 | 20 | 185 | 1.51e-67 | 210 |
| MS.gene39360.t1 | MTR_2g069300 | 60.494 | 162 | 59 | 3 | 17 | 175 | 8 | 167 | 5.38e-65 | 203 |
| MS.gene39360.t1 | MTR_8g009080 | 53.672 | 177 | 76 | 4 | 6 | 179 | 38 | 211 | 3.20e-58 | 185 |
| MS.gene39360.t1 | MTR_1g043770 | 55.556 | 171 | 68 | 5 | 14 | 179 | 2 | 169 | 3.67e-58 | 186 |
| MS.gene39360.t1 | MTR_1g043770 | 55.556 | 171 | 68 | 5 | 14 | 179 | 2 | 169 | 3.94e-58 | 184 |
| MS.gene39360.t1 | MTR_8g009080 | 54.913 | 173 | 72 | 4 | 6 | 175 | 38 | 207 | 5.12e-58 | 185 |
| MS.gene39360.t1 | MTR_1g043760 | 56.522 | 161 | 65 | 4 | 17 | 175 | 9 | 166 | 7.35e-58 | 185 |
| MS.gene39360.t1 | MTR_8g009080 | 54.913 | 173 | 72 | 4 | 6 | 175 | 38 | 207 | 1.86e-57 | 185 |
| MS.gene39360.t1 | MTR_1g044105 | 54.819 | 166 | 64 | 5 | 17 | 174 | 9 | 171 | 4.45e-55 | 172 |
| MS.gene39360.t1 | MTR_1g043775 | 54.217 | 166 | 70 | 5 | 17 | 179 | 9 | 171 | 5.54e-55 | 176 |
| MS.gene39360.t1 | MTR_1g043775 | 54.217 | 166 | 70 | 5 | 17 | 179 | 9 | 171 | 9.53e-55 | 177 |
| MS.gene39360.t1 | MTR_1g043810 | 51.807 | 166 | 74 | 5 | 17 | 179 | 9 | 171 | 2.86e-52 | 170 |
| MS.gene39360.t1 | MTR_1g043810 | 51.807 | 166 | 74 | 5 | 17 | 179 | 9 | 171 | 4.10e-52 | 170 |
| MS.gene39360.t1 | MTR_8g041600 | 51.479 | 169 | 73 | 4 | 17 | 179 | 22 | 187 | 5.26e-52 | 169 |
| MS.gene39360.t1 | MTR_8g041600 | 51.479 | 169 | 73 | 4 | 17 | 179 | 22 | 187 | 3.38e-51 | 169 |
| MS.gene39360.t1 | MTR_8g041620 | 52.121 | 165 | 70 | 4 | 17 | 175 | 22 | 183 | 2.73e-50 | 166 |
| MS.gene39360.t1 | MTR_4g119410 | 45.087 | 173 | 88 | 5 | 12 | 179 | 14 | 184 | 1.85e-48 | 161 |
| MS.gene39360.t1 | MTR_8g006930 | 44.578 | 166 | 88 | 3 | 16 | 179 | 21 | 184 | 5.04e-48 | 160 |
| MS.gene39360.t1 | MTR_7g056347 | 44.910 | 167 | 88 | 4 | 15 | 179 | 20 | 184 | 1.94e-47 | 159 |
| MS.gene39360.t1 | MTR_7g078010 | 44.048 | 168 | 86 | 4 | 16 | 179 | 21 | 184 | 3.28e-47 | 156 |
| MS.gene39360.t1 | MTR_1g093120 | 45.930 | 172 | 81 | 5 | 16 | 179 | 17 | 184 | 4.17e-47 | 157 |
| MS.gene39360.t1 | MTR_1g093140 | 44.944 | 178 | 81 | 5 | 15 | 179 | 17 | 190 | 1.30e-46 | 156 |
| MS.gene39360.t1 | MTR_8g063070 | 44.242 | 165 | 88 | 4 | 17 | 179 | 22 | 184 | 1.84e-46 | 156 |
| MS.gene39360.t1 | MTR_7g078010 | 44.048 | 168 | 86 | 4 | 16 | 179 | 21 | 184 | 2.07e-46 | 156 |
| MS.gene39360.t1 | MTR_8g062600 | 44.444 | 171 | 88 | 4 | 10 | 175 | 12 | 180 | 3.12e-43 | 147 |
| MS.gene39360.t1 | MTR_4g024660 | 41.758 | 182 | 99 | 5 | 3 | 179 | 5 | 184 | 8.76e-43 | 146 |
| MS.gene39360.t1 | MTR_1g093110 | 41.808 | 177 | 83 | 5 | 16 | 179 | 18 | 187 | 1.38e-41 | 143 |
| MS.gene39360.t1 | MTR_7g056393 | 43.210 | 162 | 88 | 4 | 16 | 175 | 21 | 180 | 1.62e-41 | 143 |
| MS.gene39360.t1 | MTR_7g029655 | 41.667 | 168 | 86 | 3 | 15 | 175 | 15 | 177 | 8.07e-41 | 141 |
| MS.gene39360.t1 | MTR_4g099380 | 42.683 | 164 | 83 | 3 | 16 | 175 | 126 | 282 | 1.40e-40 | 138 |
| MS.gene39360.t1 | MTR_2g069010 | 42.331 | 163 | 88 | 4 | 16 | 174 | 21 | 181 | 4.24e-39 | 137 |
| MS.gene39360.t1 | MTR_0032s0040 | 42.775 | 173 | 82 | 4 | 15 | 175 | 15 | 182 | 6.70e-39 | 136 |
| MS.gene39360.t1 | MTR_2g068950 | 40.000 | 180 | 97 | 5 | 1 | 174 | 1 | 175 | 1.03e-38 | 135 |
| MS.gene39360.t1 | MTR_2g069020 | 42.331 | 163 | 88 | 4 | 16 | 174 | 19 | 179 | 1.09e-38 | 135 |
| MS.gene39360.t1 | MTR_2g068960 | 41.111 | 180 | 95 | 6 | 1 | 174 | 1 | 175 | 1.97e-38 | 135 |
| MS.gene39360.t1 | MTR_2g069020 | 42.331 | 163 | 88 | 4 | 16 | 174 | 19 | 179 | 2.46e-38 | 135 |
| MS.gene39360.t1 | MTR_2g069060 | 45.181 | 166 | 69 | 5 | 16 | 179 | 21 | 166 | 5.07e-37 | 131 |
| MS.gene39360.t1 | MTR_2g069070 | 42.236 | 161 | 75 | 3 | 16 | 176 | 21 | 163 | 4.31e-36 | 124 |
| MS.gene39360.t1 | MTR_7g056370 | 35.758 | 165 | 102 | 4 | 18 | 180 | 2 | 164 | 1.68e-35 | 124 |
| MS.gene39360.t1 | MTR_7g105070 | 40.000 | 160 | 90 | 3 | 19 | 175 | 15 | 171 | 4.91e-35 | 126 |
| MS.gene39360.t1 | MTR_8g469400 | 42.442 | 172 | 80 | 7 | 5 | 171 | 7 | 164 | 8.00e-35 | 125 |
| MS.gene39360.t1 | MTR_1g070185 | 39.752 | 161 | 92 | 2 | 17 | 175 | 23 | 180 | 2.28e-34 | 124 |
| MS.gene39360.t1 | MTR_2g069060 | 46.825 | 126 | 65 | 2 | 54 | 179 | 21 | 144 | 4.90e-33 | 118 |
| MS.gene39360.t1 | MTR_1g032220 | 37.267 | 161 | 92 | 3 | 19 | 175 | 28 | 183 | 1.88e-31 | 117 |
| MS.gene39360.t1 | MTR_1g032250 | 36.646 | 161 | 93 | 3 | 19 | 175 | 28 | 183 | 5.62e-31 | 115 |
| MS.gene39360.t1 | MTR_1g032140 | 35.795 | 176 | 104 | 3 | 4 | 175 | 6 | 176 | 1.90e-30 | 114 |
| MS.gene39360.t1 | MTR_1g043840 | 62.162 | 74 | 27 | 1 | 71 | 144 | 256 | 328 | 7.82e-26 | 101 |
| MS.gene39360.t1 | MTR_7g056353 | 33.129 | 163 | 79 | 5 | 16 | 177 | 23 | 156 | 6.56e-22 | 92.0 |
| MS.gene39360.t1 | MTR_7g068650 | 32.121 | 165 | 104 | 4 | 15 | 172 | 2 | 165 | 1.98e-21 | 89.7 |
| MS.gene39360.t1 | MTR_2g068850 | 36.641 | 131 | 74 | 5 | 27 | 153 | 21 | 146 | 3.72e-17 | 76.3 |
| MS.gene39360.t1 | MTR_4g015790 | 29.870 | 154 | 83 | 4 | 28 | 161 | 14 | 162 | 4.27e-16 | 75.1 |
| MS.gene39360.t1 | MTR_2g068840 | 36.641 | 131 | 74 | 5 | 27 | 153 | 21 | 146 | 7.14e-16 | 74.3 |
| MS.gene39360.t1 | MTR_8g009180 | 64.000 | 50 | 17 | 1 | 132 | 181 | 46 | 94 | 3.25e-15 | 72.0 |
| MS.gene39360.t1 | MTR_5g048850 | 31.579 | 152 | 87 | 4 | 27 | 171 | 12 | 153 | 3.44e-15 | 72.0 |
| MS.gene39360.t1 | MTR_5g048850 | 31.579 | 152 | 87 | 4 | 27 | 171 | 12 | 153 | 5.48e-15 | 72.0 |
| MS.gene39360.t1 | MTR_1g032230 | 32.836 | 134 | 63 | 2 | 19 | 148 | 22 | 132 | 7.12e-15 | 70.9 |
| MS.gene39360.t1 | MTR_3g091350 | 34.109 | 129 | 71 | 3 | 3 | 126 | 6 | 125 | 7.34e-15 | 71.6 |
| MS.gene39360.t1 | MTR_3g070860 | 27.108 | 166 | 114 | 3 | 19 | 178 | 6 | 170 | 1.16e-14 | 70.9 |
| MS.gene39360.t1 | MTR_5g055690 | 29.286 | 140 | 93 | 2 | 27 | 164 | 12 | 147 | 3.04e-14 | 69.3 |
| MS.gene39360.t1 | MTR_5g055690 | 28.188 | 149 | 101 | 2 | 27 | 173 | 12 | 156 | 4.79e-14 | 69.3 |
| MS.gene39360.t1 | MTR_2g068800 | 39.560 | 91 | 51 | 2 | 27 | 116 | 21 | 108 | 6.04e-14 | 68.6 |
| MS.gene39360.t1 | MTR_5g048740 | 32.667 | 150 | 90 | 6 | 28 | 173 | 11 | 153 | 1.19e-13 | 68.2 |
| MS.gene39360.t1 | MTR_5g048550 | 29.870 | 154 | 91 | 4 | 27 | 173 | 12 | 155 | 1.67e-13 | 67.8 |
| MS.gene39360.t1 | MTR_5g082750 | 30.952 | 126 | 83 | 2 | 56 | 178 | 45 | 169 | 2.37e-13 | 67.4 |
| MS.gene39360.t1 | MTR_0009s0050 | 31.579 | 152 | 87 | 5 | 27 | 171 | 12 | 153 | 3.16e-13 | 67.0 |
| MS.gene39360.t1 | MTR_0009s0050 | 31.579 | 152 | 87 | 5 | 27 | 171 | 12 | 153 | 3.69e-13 | 66.6 |
| MS.gene39360.t1 | MTR_3g092890 | 31.193 | 109 | 69 | 1 | 60 | 168 | 38 | 140 | 4.80e-13 | 66.2 |
| MS.gene39360.t1 | MTR_0009s0410 | 28.859 | 149 | 97 | 4 | 28 | 173 | 12 | 154 | 6.38e-13 | 63.9 |
| MS.gene39360.t1 | MTR_5g048570 | 28.667 | 150 | 92 | 3 | 27 | 171 | 12 | 151 | 1.12e-12 | 65.5 |
| MS.gene39360.t1 | MTR_5g055800 | 28.859 | 149 | 99 | 4 | 27 | 173 | 12 | 155 | 1.26e-12 | 65.1 |
| MS.gene39360.t1 | MTR_1g062110 | 29.054 | 148 | 92 | 4 | 27 | 165 | 26 | 169 | 1.97e-12 | 64.7 |
| MS.gene39360.t1 | MTR_1g062110 | 29.054 | 148 | 92 | 4 | 27 | 165 | 26 | 169 | 2.00e-12 | 64.3 |
| MS.gene39360.t1 | MTR_5g055820 | 27.922 | 154 | 94 | 5 | 27 | 173 | 12 | 155 | 2.98e-12 | 64.3 |
| MS.gene39360.t1 | MTR_1g033810 | 32.456 | 114 | 70 | 3 | 60 | 171 | 47 | 155 | 3.51e-12 | 63.9 |
| MS.gene39360.t1 | MTR_1g034140 | 36.458 | 96 | 52 | 3 | 60 | 155 | 27 | 113 | 7.60e-12 | 62.8 |
| MS.gene39360.t1 | MTR_5g065010 | 25.362 | 138 | 100 | 2 | 27 | 161 | 3 | 140 | 8.32e-12 | 62.8 |
| MS.gene39360.t1 | MTR_1g034120 | 38.053 | 113 | 61 | 5 | 60 | 167 | 26 | 134 | 8.73e-12 | 62.8 |
| MS.gene39360.t1 | MTR_5g055900 | 29.787 | 141 | 82 | 4 | 38 | 171 | 23 | 153 | 1.23e-11 | 62.4 |
| MS.gene39360.t1 | MTR_0009s0480 | 29.605 | 152 | 94 | 6 | 27 | 173 | 11 | 154 | 1.35e-11 | 61.6 |
| MS.gene39360.t1 | MTR_4g087140 | 29.839 | 124 | 80 | 3 | 36 | 155 | 1 | 121 | 1.37e-11 | 62.4 |
| MS.gene39360.t1 | MTR_3g091360 | 40.299 | 67 | 40 | 0 | 60 | 126 | 52 | 118 | 1.59e-11 | 62.0 |
| MS.gene39360.t1 | MTR_0009s0480 | 29.801 | 151 | 93 | 6 | 28 | 173 | 12 | 154 | 1.75e-11 | 62.0 |
| MS.gene39360.t1 | MTR_4g087120 | 34.234 | 111 | 66 | 3 | 60 | 167 | 26 | 132 | 2.02e-11 | 61.6 |
| MS.gene39360.t1 | MTR_3g045230 | 29.487 | 156 | 95 | 4 | 27 | 175 | 17 | 164 | 2.26e-11 | 61.6 |
| MS.gene39360.t1 | MTR_8g024120 | 29.245 | 106 | 72 | 1 | 56 | 161 | 38 | 140 | 2.51e-11 | 61.6 |
| MS.gene39360.t1 | MTR_4g087130 | 35.294 | 85 | 52 | 1 | 60 | 141 | 26 | 110 | 2.76e-11 | 61.2 |
| MS.gene39360.t1 | MTR_1g034060 | 38.614 | 101 | 54 | 4 | 60 | 155 | 26 | 123 | 3.00e-11 | 61.2 |
| MS.gene39360.t1 | MTR_2g069130 | 38.000 | 100 | 50 | 3 | 65 | 156 | 6 | 101 | 6.54e-11 | 57.8 |
| MS.gene39360.t1 | MTR_5g011250 | 34.906 | 106 | 66 | 2 | 60 | 163 | 47 | 151 | 7.27e-11 | 60.1 |
| MS.gene39360.t1 | MTR_3g063180 | 27.027 | 148 | 101 | 3 | 28 | 171 | 10 | 154 | 7.96e-11 | 60.1 |
| MS.gene39360.t1 | MTR_5g032870 | 33.645 | 107 | 66 | 3 | 60 | 163 | 38 | 142 | 8.14e-11 | 60.1 |
| MS.gene39360.t1 | MTR_5g032880 | 31.132 | 106 | 70 | 3 | 60 | 163 | 376 | 480 | 8.20e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39360.t1 | AT5G59540 | 53.892 | 167 | 69 | 5 | 15 | 175 | 12 | 176 | 3.26e-56 | 179 |
| MS.gene39360.t1 | AT5G59540 | 53.892 | 167 | 69 | 5 | 15 | 175 | 12 | 176 | 1.72e-55 | 179 |
| MS.gene39360.t1 | AT1G06650 | 48.824 | 170 | 80 | 2 | 16 | 179 | 14 | 182 | 1.20e-54 | 176 |
| MS.gene39360.t1 | AT1G06650 | 48.824 | 170 | 80 | 2 | 16 | 179 | 14 | 182 | 4.10e-54 | 176 |
| MS.gene39360.t1 | AT1G06640 | 48.387 | 186 | 82 | 5 | 4 | 179 | 1 | 182 | 2.68e-53 | 171 |
| MS.gene39360.t1 | AT1G06640 | 48.387 | 186 | 82 | 5 | 4 | 179 | 1 | 182 | 4.50e-53 | 172 |
| MS.gene39360.t1 | AT1G06640 | 48.387 | 186 | 82 | 5 | 4 | 179 | 1 | 182 | 1.32e-52 | 172 |
| MS.gene39360.t1 | AT1G06645 | 49.143 | 175 | 81 | 3 | 9 | 176 | 21 | 194 | 2.04e-52 | 172 |
| MS.gene39360.t1 | AT1G06620 | 48.171 | 164 | 80 | 3 | 19 | 179 | 18 | 179 | 3.61e-51 | 166 |
| MS.gene39360.t1 | AT1G04350 | 49.102 | 167 | 75 | 4 | 14 | 175 | 8 | 169 | 9.23e-51 | 167 |
| MS.gene39360.t1 | AT5G43440 | 46.784 | 171 | 83 | 2 | 15 | 179 | 11 | 179 | 1.03e-50 | 165 |
| MS.gene39360.t1 | AT1G06620 | 49.686 | 159 | 75 | 3 | 19 | 174 | 18 | 174 | 3.72e-50 | 166 |
| MS.gene39360.t1 | AT5G43440 | 46.784 | 171 | 83 | 2 | 15 | 179 | 11 | 179 | 9.05e-50 | 164 |
| MS.gene39360.t1 | AT5G59530 | 52.410 | 166 | 72 | 7 | 15 | 175 | 11 | 174 | 7.45e-49 | 162 |
| MS.gene39360.t1 | AT2G30830 | 46.061 | 165 | 87 | 2 | 16 | 179 | 9 | 172 | 2.64e-48 | 160 |
| MS.gene39360.t1 | AT1G03410 | 47.273 | 165 | 79 | 4 | 16 | 174 | 8 | 170 | 1.07e-46 | 156 |
| MS.gene39360.t1 | AT2G30840 | 45.122 | 164 | 84 | 3 | 16 | 174 | 9 | 171 | 1.32e-46 | 155 |
| MS.gene39360.t1 | AT1G03410 | 47.273 | 165 | 79 | 4 | 16 | 174 | 45 | 207 | 2.36e-46 | 156 |
| MS.gene39360.t1 | AT2G30840 | 45.122 | 164 | 84 | 3 | 16 | 174 | 9 | 171 | 2.73e-46 | 155 |
| MS.gene39360.t1 | AT2G30840 | 45.122 | 164 | 84 | 3 | 16 | 174 | 9 | 171 | 2.86e-46 | 155 |
| MS.gene39360.t1 | AT2G25450 | 47.205 | 161 | 81 | 3 | 16 | 174 | 9 | 167 | 4.44e-46 | 155 |
| MS.gene39360.t1 | AT3G61400 | 41.011 | 178 | 97 | 3 | 4 | 174 | 1 | 177 | 1.32e-43 | 147 |
| MS.gene39360.t1 | AT5G43450 | 42.105 | 171 | 88 | 4 | 15 | 179 | 11 | 176 | 3.41e-43 | 145 |
| MS.gene39360.t1 | AT3G61400 | 41.011 | 178 | 97 | 3 | 4 | 174 | 1 | 177 | 4.81e-43 | 147 |
| MS.gene39360.t1 | AT5G43450 | 43.114 | 167 | 84 | 4 | 15 | 175 | 11 | 172 | 1.54e-42 | 145 |
| MS.gene39360.t1 | AT1G04380 | 43.478 | 161 | 72 | 4 | 16 | 175 | 13 | 155 | 6.01e-41 | 139 |
| MS.gene39360.t1 | AT1G04380 | 43.478 | 161 | 72 | 4 | 16 | 175 | 13 | 155 | 2.84e-40 | 139 |
| MS.gene39360.t1 | AT1G03400 | 42.945 | 163 | 79 | 3 | 16 | 174 | 8 | 160 | 7.16e-39 | 136 |
| MS.gene39360.t1 | AT1G03400 | 42.945 | 163 | 79 | 3 | 16 | 174 | 8 | 160 | 1.78e-38 | 135 |
| MS.gene39360.t1 | AT3G13610 | 32.468 | 154 | 91 | 5 | 27 | 175 | 26 | 171 | 3.94e-18 | 80.9 |
| MS.gene39360.t1 | AT1G55290 | 33.333 | 132 | 77 | 3 | 27 | 153 | 25 | 150 | 4.68e-17 | 77.8 |
| MS.gene39360.t1 | AT3G12900 | 32.680 | 153 | 98 | 4 | 27 | 177 | 21 | 170 | 2.64e-16 | 75.9 |
| MS.gene39360.t1 | AT2G38240 | 28.205 | 156 | 102 | 3 | 20 | 171 | 4 | 153 | 2.47e-15 | 72.8 |
| MS.gene39360.t1 | AT5G05600 | 26.923 | 182 | 115 | 6 | 4 | 177 | 10 | 181 | 2.10e-13 | 67.0 |
| MS.gene39360.t1 | AT5G05600 | 26.923 | 182 | 115 | 6 | 4 | 177 | 10 | 181 | 3.30e-13 | 67.0 |
| MS.gene39360.t1 | AT4G10500 | 27.350 | 117 | 81 | 2 | 55 | 171 | 39 | 151 | 1.95e-12 | 64.7 |
| MS.gene39360.t1 | AT2G36690 | 29.139 | 151 | 93 | 4 | 25 | 165 | 18 | 164 | 2.04e-12 | 64.7 |
| MS.gene39360.t1 | AT2G36690 | 29.139 | 151 | 93 | 4 | 25 | 165 | 18 | 164 | 2.04e-12 | 64.7 |
| MS.gene39360.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.69e-12 | 63.9 |
| MS.gene39360.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.69e-12 | 63.9 |
| MS.gene39360.t1 | AT4G22880 | 28.767 | 146 | 92 | 4 | 28 | 163 | 7 | 150 | 3.69e-12 | 63.9 |
| MS.gene39360.t1 | AT1G17020 | 33.333 | 117 | 65 | 3 | 60 | 171 | 53 | 161 | 5.85e-12 | 63.5 |
| MS.gene39360.t1 | AT3G55970 | 25.786 | 159 | 108 | 4 | 28 | 177 | 14 | 171 | 1.33e-11 | 62.0 |
| MS.gene39360.t1 | AT3G55970 | 25.786 | 159 | 108 | 4 | 28 | 177 | 14 | 171 | 1.46e-11 | 62.4 |
| MS.gene39360.t1 | AT3G19010 | 41.333 | 75 | 38 | 2 | 55 | 125 | 23 | 95 | 2.18e-11 | 61.6 |
| MS.gene39360.t1 | AT3G19010 | 41.333 | 75 | 38 | 2 | 55 | 125 | 23 | 95 | 2.21e-11 | 61.6 |
| MS.gene39360.t1 | AT3G19010 | 41.333 | 75 | 38 | 2 | 55 | 125 | 23 | 95 | 2.21e-11 | 61.6 |
| MS.gene39360.t1 | AT3G19010 | 41.333 | 75 | 38 | 2 | 55 | 125 | 23 | 95 | 2.24e-11 | 61.6 |
| MS.gene39360.t1 | AT2G44800 | 22.535 | 142 | 104 | 2 | 16 | 153 | 4 | 143 | 2.97e-11 | 61.2 |
Find 41 sgRNAs with CRISPR-Local
Find 43 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTGGTTTGAGAGTATC+AGG | 0.295106 | 8.3:+79855783 | None:intergenic |
| GAAACAAAAGCAGGTGTAAA+AGG | 0.300249 | 8.3:-79856200 | MS.gene39360:CDS |
| CTCAATTGGAAGGATAGTTT+TGG | 0.336725 | 8.3:-79855822 | MS.gene39360:CDS |
| CATACTACAGGAAACTCTTC+TGG | 0.350265 | 8.3:+79855768 | None:intergenic |
| GTTAGGTTTGGTTGTATCAA+TGG | 0.379115 | 8.3:+79856259 | None:intergenic |
| GGTTGATGATGGAATAATTC+AGG | 0.384299 | 8.3:+79856149 | None:intergenic |
| AATAACATTGCTTGTGTTGT+TGG | 0.393117 | 8.3:+79856109 | None:intergenic |
| CGTATTTGTCAGGTTGATGA+TGG | 0.404579 | 8.3:+79856138 | None:intergenic |
| TCAAGGAAGCATGTGAAACT+TGG | 0.407695 | 8.3:-79856019 | MS.gene39360:CDS |
| CTGAATGTGGAATCAAGGTT+AGG | 0.417776 | 8.3:+79856242 | None:intergenic |
| ATAGCTCCCCAGCACTCAAT+TGG | 0.419090 | 8.3:-79855836 | MS.gene39360:CDS |
| TTGGCTTTCTCGTATTTGTC+AGG | 0.425112 | 8.3:+79856128 | None:intergenic |
| ACTATCCCTTGGTGAATACT+TGG | 0.435000 | 8.3:+79856050 | None:intergenic |
| GTTCTTGAGGAGTTGAAAGA+TGG | 0.453205 | 8.3:-79855957 | MS.gene39360:CDS |
| TGACTTTCTCAACTATCCCT+TGG | 0.453903 | 8.3:+79856039 | None:intergenic |
| CTATCCTTCCAATTGAGTGC+TGG | 0.480825 | 8.3:+79855828 | None:intergenic |
| TATCCTTCCAATTGAGTGCT+GGG | 0.483226 | 8.3:+79855829 | None:intergenic |
| GGTGTAAAAGGACTTGTTGA+TGG | 0.488743 | 8.3:-79856188 | MS.gene39360:CDS |
| CAAGGAAGCATGTGAAACTT+GGG | 0.490551 | 8.3:-79856018 | MS.gene39360:CDS |
| TGTGGAATCAAGGTTAGGTT+TGG | 0.492547 | 8.3:+79856247 | None:intergenic |
| AGTTGAAAGATGGGGTGAAA+AGG | 0.500490 | 8.3:-79855947 | MS.gene39360:CDS |
| AACTCCTCAAGAACACTCAA+AGG | 0.516232 | 8.3:+79855966 | None:intergenic |
| TGCTTTGCGTTCACTGAATG+TGG | 0.522597 | 8.3:+79856229 | None:intergenic |
| ACTCCTCAAGAACACTCAAA+GGG | 0.527377 | 8.3:+79855967 | None:intergenic |
| CTTTATTATCAATATCATCA+AGG | 0.531884 | 8.3:+79856075 | None:intergenic |
| GTTCACTGAATGTGGAATCA+AGG | 0.532410 | 8.3:+79856237 | None:intergenic |
| AAGAGTTTCCTGTAGTATGC+AGG | 0.544361 | 8.3:-79855764 | MS.gene39360:CDS |
| TAAACATACCTGCATACTAC+AGG | 0.544570 | 8.3:+79855756 | None:intergenic |
| AATCCCTTTGAGTGTTCTTG+AGG | 0.545874 | 8.3:-79855970 | MS.gene39360:CDS |
| TTCTTGAGGAGTTGAAAGAT+GGG | 0.560902 | 8.3:-79855956 | MS.gene39360:CDS |
| CTCCCCAGCACTCAATTGGA+AGG | 0.579306 | 8.3:-79855832 | MS.gene39360:CDS |
| ATATCATCAAGGTCTATGAC+AGG | 0.589876 | 8.3:+79856086 | None:intergenic |
| GCATTTGATGAAACAAAAGC+AGG | 0.595830 | 8.3:-79856209 | MS.gene39360:CDS |
| AGGGATAGTTGAGAAAGTCA+AGG | 0.633105 | 8.3:-79856036 | MS.gene39360:CDS |
| TCTGGTTTGAGAGTATCAGG+TGG | 0.638557 | 8.3:+79855786 | None:intergenic |
| AAGATCCAAGTATTCACCAA+GGG | 0.638816 | 8.3:-79856055 | MS.gene39360:CDS |
| AAGGAAGCATGTGAAACTTG+GGG | 0.645602 | 8.3:-79856017 | MS.gene39360:CDS |
| ATCCTTCCAATTGAGTGCTG+GGG | 0.645721 | 8.3:+79855830 | None:intergenic |
| GTAAAAGGACTTGTTGATGG+AGG | 0.671654 | 8.3:-79856185 | MS.gene39360:CDS |
| AAAGATCCAAGTATTCACCA+AGG | 0.675646 | 8.3:-79856056 | MS.gene39360:CDS |
| TCTTGAGGAGTTGAAAGATG+GGG | 0.685762 | 8.3:-79855955 | MS.gene39360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTTATTATCAATATCATCA+AGG | + | chr8.3:79855937-79855956 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAGTTGTCAATCA+TGG | - | chr8.3:79856016-79856035 | MS.gene39360:CDS | 25.0% |
| AATAACATTGCTTGTGTTGT+TGG | + | chr8.3:79855903-79855922 | None:intergenic | 30.0% | |
| AAAGATCCAAGTATTCACCA+AGG | - | chr8.3:79855953-79855972 | MS.gene39360:CDS | 35.0% | |
| AAGATCCAAGTATTCACCAA+GGG | - | chr8.3:79855954-79855973 | MS.gene39360:CDS | 35.0% | |
| ATATCATCAAGGTCTATGAC+AGG | + | chr8.3:79855926-79855945 | None:intergenic | 35.0% | |
| GAAACAAAAGCAGGTGTAAA+AGG | - | chr8.3:79855809-79855828 | MS.gene39360:CDS | 35.0% | |
| GCATTTGATGAAACAAAAGC+AGG | - | chr8.3:79855800-79855819 | MS.gene39360:CDS | 35.0% | |
| TAAACATACCTGCATACTAC+AGG | + | chr8.3:79856256-79856275 | None:intergenic | 35.0% | |
| TTCTTGAGGAGTTGAAAGAT+GGG | - | chr8.3:79856053-79856072 | MS.gene39360:CDS | 35.0% | |
| ! | CTCAATTGGAAGGATAGTTT+TGG | - | chr8.3:79856187-79856206 | MS.gene39360:CDS | 35.0% |
| ! | GTTAGGTTTGGTTGTATCAA+TGG | + | chr8.3:79855753-79855772 | None:intergenic | 35.0% |
| !! | GGTTGATGATGGAATAATTC+AGG | + | chr8.3:79855863-79855882 | None:intergenic | 35.0% |
| !!! | GGATAGTTTTGGTTGTAACT+TGG | - | chr8.3:79856198-79856217 | MS.gene39360:CDS | 35.0% |
| AACTCCTCAAGAACACTCAA+AGG | + | chr8.3:79856046-79856065 | None:intergenic | 40.0% | |
| AAGAGTTTCCTGTAGTATGC+AGG | - | chr8.3:79856245-79856264 | MS.gene39360:CDS | 40.0% | |
| AATCCCTTTGAGTGTTCTTG+AGG | - | chr8.3:79856039-79856058 | MS.gene39360:CDS | 40.0% | |
| ACTATCCCTTGGTGAATACT+TGG | + | chr8.3:79855962-79855981 | None:intergenic | 40.0% | |
| ACTCCTCAAGAACACTCAAA+GGG | + | chr8.3:79856045-79856064 | None:intergenic | 40.0% | |
| AGGGATAGTTGAGAAAGTCA+AGG | - | chr8.3:79855973-79855992 | MS.gene39360:CDS | 40.0% | |
| AGTTGAAAGATGGGGTGAAA+AGG | - | chr8.3:79856062-79856081 | MS.gene39360:CDS | 40.0% | |
| CATACTACAGGAAACTCTTC+TGG | + | chr8.3:79856244-79856263 | None:intergenic | 40.0% | |
| CTGAATGTGGAATCAAGGTT+AGG | + | chr8.3:79855770-79855789 | None:intergenic | 40.0% | |
| GTTCACTGAATGTGGAATCA+AGG | + | chr8.3:79855775-79855794 | None:intergenic | 40.0% | |
| GTTCTTGAGGAGTTGAAAGA+TGG | - | chr8.3:79856052-79856071 | MS.gene39360:CDS | 40.0% | |
| TATCCTTCCAATTGAGTGCT+GGG | + | chr8.3:79856183-79856202 | None:intergenic | 40.0% | |
| TCTTGAGGAGTTGAAAGATG+GGG | - | chr8.3:79856054-79856073 | MS.gene39360:CDS | 40.0% | |
| TGACTTTCTCAACTATCCCT+TGG | + | chr8.3:79855973-79855992 | None:intergenic | 40.0% | |
| TGTGGAATCAAGGTTAGGTT+TGG | + | chr8.3:79855765-79855784 | None:intergenic | 40.0% | |
| ! | AAGGAAGCATGTGAAACTTG+GGG | - | chr8.3:79855992-79856011 | MS.gene39360:CDS | 40.0% |
| ! | CAAGGAAGCATGTGAAACTT+GGG | - | chr8.3:79855991-79856010 | MS.gene39360:CDS | 40.0% |
| ! | TCAAGGAAGCATGTGAAACT+TGG | - | chr8.3:79855990-79856009 | MS.gene39360:CDS | 40.0% |
| ! | TTGGCTTTCTCGTATTTGTC+AGG | + | chr8.3:79855884-79855903 | None:intergenic | 40.0% |
| !! | CGTATTTGTCAGGTTGATGA+TGG | + | chr8.3:79855874-79855893 | None:intergenic | 40.0% |
| !! | GGTGTAAAAGGACTTGTTGA+TGG | - | chr8.3:79855821-79855840 | MS.gene39360:CDS | 40.0% |
| !! | GTAAAAGGACTTGTTGATGG+AGG | - | chr8.3:79855824-79855843 | MS.gene39360:CDS | 40.0% |
| !! | TCTTCTGGTTTGAGAGTATC+AGG | + | chr8.3:79856229-79856248 | None:intergenic | 40.0% |
| CTATCCTTCCAATTGAGTGC+TGG | + | chr8.3:79856184-79856203 | None:intergenic | 45.0% | |
| TGCTTTGCGTTCACTGAATG+TGG | + | chr8.3:79855783-79855802 | None:intergenic | 45.0% | |
| ! | ATCCTTCCAATTGAGTGCTG+GGG | + | chr8.3:79856182-79856201 | None:intergenic | 45.0% |
| !! | TCTGGTTTGAGAGTATCAGG+TGG | + | chr8.3:79856226-79856245 | None:intergenic | 45.0% |
| ATAGCTCCCCAGCACTCAAT+TGG | - | chr8.3:79856173-79856192 | MS.gene39360:CDS | 50.0% | |
| CTCCCCAGCACTCAATTGGA+AGG | - | chr8.3:79856177-79856196 | MS.gene39360:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79855743 | 79856288 | 79855743 | ID=MS.gene39360 |
| chr8.3 | mRNA | 79855743 | 79856288 | 79855743 | ID=MS.gene39360.t1;Parent=MS.gene39360 |
| chr8.3 | exon | 79855743 | 79856288 | 79855743 | ID=MS.gene39360.t1.exon1;Parent=MS.gene39360.t1 |
| chr8.3 | CDS | 79855743 | 79856288 | 79855743 | ID=cds.MS.gene39360.t1;Parent=MS.gene39360.t1 |
| Gene Sequence |
| Protein sequence |
