AlfalfaGEDB | MS.gene77196

M. sativa cultivar XinJiangDaYe / MS.gene77196

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77196.t1	XP_013448803.1	98.8	81	1	0	6	86	94	174	3.90E-34	153.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77196.t1	A0A072UAI2	98.8	81	1	0	6	86	94	174	2.8e-34	153.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene77196	0.833848	4.21E-56	-1.69E-46
MS.gene049171	MS.gene77196	0.823051	1.71E-53	-1.69E-46
MS.gene049217	MS.gene77196	0.836967	6.86E-57	-1.69E-46
MS.gene049222	MS.gene77196	0.854873	9.21E-62	-1.69E-46
MS.gene049285	MS.gene77196	0.819365	1.21E-52	-1.69E-46
MS.gene049320	MS.gene77196	0.805965	1.03E-49	-1.69E-46
MS.gene049609	MS.gene77196	0.858876	6.10E-63	-1.69E-46
MS.gene049805	MS.gene77196	0.838817	2.30E-57	-1.69E-46
MS.gene050333	MS.gene77196	0.8099	1.51E-50	-1.69E-46
MS.gene050380	MS.gene77196	-0.801472	8.86E-49	-1.69E-46
MS.gene050381	MS.gene77196	-0.807538	4.81E-50	-1.69E-46
MS.gene050444	MS.gene77196	0.804877	1.75E-49	-1.69E-46
MS.gene050538	MS.gene77196	0.836337	9.93E-57	-1.69E-46
MS.gene050593	MS.gene77196	0.847991	8.15E-60	-1.69E-46
MS.gene050670	MS.gene77196	0.814852	1.25E-51	-1.69E-46
MS.gene050747	MS.gene77196	0.859786	3.25E-63	-1.69E-46
MS.gene050772	MS.gene77196	0.864565	1.11E-64	-1.69E-46
MS.gene05080	MS.gene77196	0.828754	7.54E-55	-1.69E-46
MS.gene05081	MS.gene77196	0.808818	2.57E-50	-1.69E-46
MS.gene050868	MS.gene77196	0.817218	3.70E-52	-1.69E-46
MS.gene050871	MS.gene77196	0.816961	4.22E-52	-1.69E-46
MS.gene050950	MS.gene77196	0.846287	2.39E-59	-1.69E-46
MS.gene05105	MS.gene77196	0.830571	2.72E-55	-1.69E-46
MS.gene051387	MS.gene77196	0.840624	7.77E-58	-1.69E-46
MS.gene051666	MS.gene77196	0.850845	1.30E-60	-1.69E-46
MS.gene051694	MS.gene77196	0.869237	3.60E-66	-1.69E-46
MS.gene051734	MS.gene77196	0.80576	1.14E-49	-1.69E-46
MS.gene051838	MS.gene77196	0.818828	1.60E-52	-1.69E-46
MS.gene051858	MS.gene77196	0.867969	9.25E-66	-1.69E-46
MS.gene051874	MS.gene77196	0.820677	6.04E-53	-1.69E-46
MS.gene052164	MS.gene77196	0.806899	6.57E-50	-1.69E-46
MS.gene05234	MS.gene77196	-0.801055	1.08E-48	-1.69E-46
MS.gene052379	MS.gene77196	0.815011	1.15E-51	-1.69E-46
MS.gene052421	MS.gene77196	0.807576	4.73E-50	-1.69E-46
MS.gene052481	MS.gene77196	0.807128	5.88E-50	-1.69E-46
MS.gene052484	MS.gene77196	0.807755	4.33E-50	-1.69E-46
MS.gene052501	MS.gene77196	0.812394	4.33E-51	-1.69E-46
MS.gene052503	MS.gene77196	0.815544	8.75E-52	-1.69E-46
MS.gene052505	MS.gene77196	0.812616	3.88E-51	-1.69E-46
MS.gene052615	MS.gene77196	0.82408	9.80E-54	-1.69E-46
MS.gene052823	MS.gene77196	0.810239	1.27E-50	-1.69E-46
MS.gene052825	MS.gene77196	0.809542	1.80E-50	-1.69E-46
MS.gene052870	MS.gene77196	0.821585	3.73E-53	-1.69E-46
MS.gene052872	MS.gene77196	0.830604	2.67E-55	-1.69E-46
MS.gene052916	MS.gene77196	0.813472	2.52E-51	-1.69E-46
MS.gene052966	MS.gene77196	0.81516	1.07E-51	-1.69E-46
MS.gene052982	MS.gene77196	0.800044	1.73E-48	-1.69E-46
MS.gene053103	MS.gene77196	0.810207	1.29E-50	-1.69E-46
MS.gene053104	MS.gene77196	0.831134	1.98E-55	-1.69E-46
MS.gene053203	MS.gene77196	0.813671	2.27E-51	-1.69E-46
MS.gene053207	MS.gene77196	0.816871	4.42E-52	-1.69E-46
MS.gene053213	MS.gene77196	0.834293	3.26E-56	-1.69E-46
MS.gene053286	MS.gene77196	0.81736	3.43E-52	-1.69E-46
MS.gene053322	MS.gene77196	0.821365	4.20E-53	-1.69E-46
MS.gene053420	MS.gene77196	-0.801964	7.02E-49	-1.69E-46
MS.gene053436	MS.gene77196	0.809013	2.33E-50	-1.69E-46
MS.gene053449	MS.gene77196	0.819531	1.11E-52	-1.69E-46
MS.gene053479	MS.gene77196	0.816565	5.18E-52	-1.69E-46
MS.gene053574	MS.gene77196	0.850309	1.85E-60	-1.69E-46
MS.gene053579	MS.gene77196	0.800453	1.43E-48	-1.69E-46
MS.gene053626	MS.gene77196	0.806585	7.66E-50	-1.69E-46
MS.gene053632	MS.gene77196	0.821577	3.75E-53	-1.69E-46
MS.gene053824	MS.gene77196	0.842744	2.14E-58	-1.69E-46
MS.gene053912	MS.gene77196	0.809085	2.25E-50	-1.69E-46
MS.gene053916	MS.gene77196	0.810453	1.14E-50	-1.69E-46
MS.gene054003	MS.gene77196	0.812026	5.21E-51	-1.69E-46
MS.gene054408	MS.gene77196	0.821861	3.22E-53	-1.69E-46
MS.gene054595	MS.gene77196	0.808319	3.28E-50	-1.69E-46
MS.gene054600	MS.gene77196	0.818706	1.70E-52	-1.69E-46
MS.gene054642	MS.gene77196	0.823387	1.42E-53	-1.69E-46
MS.gene054706	MS.gene77196	-0.820062	8.37E-53	-1.69E-46
MS.gene054707	MS.gene77196	-0.830305	3.17E-55	-1.69E-46
MS.gene054927	MS.gene77196	0.821389	4.14E-53	-1.69E-46
MS.gene05494	MS.gene77196	0.826861	2.15E-54	-1.69E-46
MS.gene05505	MS.gene77196	0.836064	1.16E-56	-1.69E-46
MS.gene055206	MS.gene77196	0.826387	2.79E-54	-1.69E-46
MS.gene055212	MS.gene77196	0.806479	8.06E-50	-1.69E-46
MS.gene055224	MS.gene77196	0.815544	8.76E-52	-1.69E-46
MS.gene055289	MS.gene77196	0.841798	3.82E-58	-1.69E-46
MS.gene055362	MS.gene77196	0.806307	8.77E-50	-1.69E-46
MS.gene055502	MS.gene77196	0.840724	7.32E-58	-1.69E-46
MS.gene055577	MS.gene77196	0.843971	1.01E-58	-1.69E-46
MS.gene055722	MS.gene77196	0.845864	3.11E-59	-1.69E-46
MS.gene05592	MS.gene77196	0.821466	3.98E-53	-1.69E-46
MS.gene055941	MS.gene77196	0.85107	1.13E-60	-1.69E-46
MS.gene056083	MS.gene77196	0.80043	1.45E-48	-1.69E-46
MS.gene056166	MS.gene77196	0.805678	1.19E-49	-1.69E-46
MS.gene056448	MS.gene77196	0.834499	2.89E-56	-1.69E-46
MS.gene056511	MS.gene77196	0.831593	1.53E-55	-1.69E-46
MS.gene056657	MS.gene77196	0.80922	2.11E-50	-1.69E-46
MS.gene056692	MS.gene77196	0.803714	3.06E-49	-1.69E-46
MS.gene056946	MS.gene77196	0.805426	1.34E-49	-1.69E-46
MS.gene057076	MS.gene77196	0.826115	3.24E-54	-1.69E-46
MS.gene057146	MS.gene77196	0.840655	7.63E-58	-1.69E-46
MS.gene057331	MS.gene77196	0.806194	9.26E-50	-1.69E-46
MS.gene057416	MS.gene77196	0.838552	2.69E-57	-1.69E-46
MS.gene057658	MS.gene77196	0.81294	3.29E-51	-1.69E-46
MS.gene057734	MS.gene77196	0.806342	8.62E-50	-1.69E-46
MS.gene057831	MS.gene77196	0.820346	7.20E-53	-1.69E-46
MS.gene057926	MS.gene77196	0.808288	3.33E-50	-1.69E-46
MS.gene058019	MS.gene77196	0.801093	1.06E-48	-1.69E-46
MS.gene058130	MS.gene77196	0.820022	8.54E-53	-1.69E-46
MS.gene058157	MS.gene77196	0.805675	1.19E-49	-1.69E-46
MS.gene058338	MS.gene77196	0.824643	7.22E-54	-1.69E-46
MS.gene058376	MS.gene77196	0.819127	1.37E-52	-1.69E-46
MS.gene05837	MS.gene77196	0.859062	5.36E-63	-1.69E-46
MS.gene058419	MS.gene77196	0.828243	1.00E-54	-1.69E-46
MS.gene058544	MS.gene77196	0.819397	1.19E-52	-1.69E-46
MS.gene058700	MS.gene77196	0.806296	8.81E-50	-1.69E-46
MS.gene058773	MS.gene77196	0.825269	5.14E-54	-1.69E-46
MS.gene058838	MS.gene77196	0.831588	1.53E-55	-1.69E-46
MS.gene058840	MS.gene77196	-0.816031	6.82E-52	-1.69E-46
MS.gene059023	MS.gene77196	0.836346	9.88E-57	-1.69E-46
MS.gene05913	MS.gene77196	0.826757	2.28E-54	-1.69E-46
MS.gene05934	MS.gene77196	0.851911	6.52E-61	-1.69E-46
MS.gene059536	MS.gene77196	0.856036	4.22E-62	-1.69E-46
MS.gene059667	MS.gene77196	0.801712	7.91E-49	-1.69E-46
MS.gene059677	MS.gene77196	0.810828	9.49E-51	-1.69E-46
MS.gene059718	MS.gene77196	0.840015	1.12E-57	-1.69E-46
MS.gene059801	MS.gene77196	0.814846	1.25E-51	-1.69E-46
MS.gene059902	MS.gene77196	0.866576	2.58E-65	-1.69E-46
MS.gene059960	MS.gene77196	0.816877	4.41E-52	-1.69E-46
MS.gene060403	MS.gene77196	0.801323	9.51E-49	-1.69E-46
MS.gene060482	MS.gene77196	0.818052	2.40E-52	-1.69E-46
MS.gene060762	MS.gene77196	0.824379	8.33E-54	-1.69E-46
MS.gene06077	MS.gene77196	0.802706	4.94E-49	-1.69E-46
MS.gene060804	MS.gene77196	0.826513	2.60E-54	-1.69E-46
MS.gene060818	MS.gene77196	0.822537	2.25E-53	-1.69E-46
MS.gene060835	MS.gene77196	0.806743	7.09E-50	-1.69E-46
MS.gene060837	MS.gene77196	0.83465	2.65E-56	-1.69E-46
MS.gene06092	MS.gene77196	0.853427	2.41E-61	-1.69E-46
MS.gene061041	MS.gene77196	0.822296	2.56E-53	-1.69E-46
MS.gene061150	MS.gene77196	0.819749	9.86E-53	-1.69E-46
MS.gene061200	MS.gene77196	0.813075	3.07E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77196.t1	MTR_7g059255	98.765	81	1	0	6	86	94	174	3.03e-53	163

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene77196.t1	AT4G13220	60.976	82	30	1	7	86	95	176	4.64e-29	102

Find 24 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCTACAGCTTTCTTTATTT+TGG	0.099548	7.2:-37782146	MS.gene77196:intron
GTTACTGAAATCCTTGCTAT+TGG	0.328579	7.2:+37782214	None:intergenic
ATCCTTTGGAAGAGGCTAAT+AGG	0.388720	7.2:-37781320	MS.gene77196:CDS
CTTGATCTTTATTGAATGCT+AGG	0.393502	7.2:+37781388	None:intergenic
GAAATCCTTGCTATTGGTCT+TGG	0.422289	7.2:+37782220	None:intergenic
CAAAGGATCATCCATAGGTT+TGG	0.442636	7.2:+37781335	None:intergenic
CAAACCTATGGATGATCCTT+TGG	0.442745	7.2:-37781334	MS.gene77196:CDS
GGAAGAGGCTAATAGGATAA+TGG	0.446378	7.2:-37781313	MS.gene77196:CDS
CAAGAACCACCTAGCGGGAA+TGG	0.467436	7.2:-37781369	MS.gene77196:CDS
GTTTGTTCATAGGCTACCAT+AGG	0.522734	7.2:-37781429	MS.gene77196:intron
CTGCAGAATGCATGGAGAGT+TGG	0.536539	7.2:-37782588	None:intergenic
AGGAACTACGACCAAACCTA+TGG	0.545163	7.2:-37781346	MS.gene77196:CDS
TGCAAAGTATGCAAGTCCTA+TGG	0.552339	7.2:+37781413	None:intergenic
AGATAGTTCTGCAGAATGCA+TGG	0.555735	7.2:-37782596	None:intergenic
AAGATCAAGAACCACCTAGC+GGG	0.560815	7.2:-37781374	MS.gene77196:CDS
ATCCTATTAGCCTCTTCCAA+AGG	0.564567	7.2:+37781318	None:intergenic
TATGGATGATCCTTTGGAAG+AGG	0.564870	7.2:-37781328	MS.gene77196:CDS
GTAGTTCCTCCATTCCCGCT+AGG	0.572693	7.2:+37781360	None:intergenic
TCTTCCAAAGGATCATCCAT+AGG	0.581655	7.2:+37781330	None:intergenic
AAATAAAGAAAGCTGTAGAG+AGG	0.616626	7.2:+37782149	None:intergenic
GTTCCTCCATTCCCGCTAGG+TGG	0.621366	7.2:+37781363	None:intergenic
GAACCACCTAGCGGGAATGG+AGG	0.633606	7.2:-37781366	MS.gene77196:CDS
CTGTACCAAGACCAATAGCA+AGG	0.633937	7.2:-37782225	MS.gene77196:CDS
AAAGATCAAGAACCACCTAG+CGG	0.725332	7.2:-37781375	MS.gene77196:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTAATATGATATGAAAAA+TGG	+	chr7.2:37781768-37781787	None:intergenic	10.0%
!!	AATAGTTGAGACTTATTTAT+AGG	+	chr7.2:37781927-37781946	None:intergenic	20.0%
!!	ATAGTTGAGACTTATTTATA+GGG	+	chr7.2:37781926-37781945	None:intergenic	20.0%
!!	TTCCCTTTAATAACATAATA+TGG	+	chr7.2:37782121-37782140	None:intergenic	20.0%
!	AAAAAATTCAACCCTACAAA+AGG	+	chr7.2:37782173-37782192	None:intergenic	25.0%
!	AAAAATTCAACCCTACAAAA+GGG	+	chr7.2:37782172-37782191	None:intergenic	25.0%
!	ATAGTGAATAAACCATAGTT+AGG	-	chr7.2:37781838-37781857	MS.gene77196:intron	25.0%
!	GGCCATATTATGTTATTAAA+GGG	-	chr7.2:37782116-37782135	MS.gene77196:intron	25.0%
!	GTAAAAAACTTGAAAACAAC+AGG	+	chr7.2:37781566-37781585	None:intergenic	25.0%
!	GTTAGGTTATATGTAAACTA+TGG	-	chr7.2:37781855-37781874	MS.gene77196:intron	25.0%
!	GTTTACATATAACCTAACTA+TGG	+	chr7.2:37781853-37781872	None:intergenic	25.0%
!	TAGTTGAGACTTATTTATAG+GGG	+	chr7.2:37781925-37781944	None:intergenic	25.0%
!	TGGCCATATTATGTTATTAA+AGG	-	chr7.2:37782115-37782134	MS.gene77196:intron	25.0%
!	TTGTACTAAATCACTTATTG+CGG	+	chr7.2:37781442-37781461	None:intergenic	25.0%
!!	AACATCAATGCTATATTTTG+TGG	-	chr7.2:37782412-37782431	MS.gene77196:intron	25.0%
!!!	TACAAAGTATTGTCAAACAA+CGG	-	chr7.2:37782275-37782294	MS.gene77196:intron	25.0%
	AAATAAAGAAAGCTGTAGAG+AGG	+	chr7.2:37781734-37781753	None:intergenic	30.0%
	AAATGGTAATTGTGACTTAC+AGG	+	chr7.2:37781352-37781371	None:intergenic	30.0%
	AATGGTAATTGTGACTTACA+GGG	+	chr7.2:37781351-37781370	None:intergenic	30.0%
	ATATTTGTGCTATATGGTAG+CGG	-	chr7.2:37781393-37781412	MS.gene77196:CDS	30.0%
	ATCCTAAAGTCTTAACCATT+GGG	+	chr7.2:37782378-37782397	None:intergenic	30.0%
	CAAGTACATTGTTTGTTCAT+AGG	-	chr7.2:37782441-37782460	MS.gene77196:intron	30.0%
	CTTGATCTTTATTGAATGCT+AGG	+	chr7.2:37782495-37782514	None:intergenic	30.0%
	GAGAAACATGAAAAACTAGA+AGG	+	chr7.2:37781602-37781621	None:intergenic	30.0%
	TAAGTCACAATTACCATTTC+CGG	-	chr7.2:37781353-37781372	MS.gene77196:CDS	30.0%
	TAGCAGATATTTGTGCTATA+TGG	-	chr7.2:37781387-37781406	MS.gene77196:CDS	30.0%
	TATCCTAAAGTCTTAACCAT+TGG	+	chr7.2:37782379-37782398	None:intergenic	30.0%
	TGGTTTCATGTTATGAATCA+TGG	+	chr7.2:37782073-37782092	None:intergenic	30.0%
!	AAGGATTTCAGTAACTTTTG+TGG	-	chr7.2:37781674-37781693	MS.gene77196:intron	30.0%
!	ATATGTCTTTTCCCTTTTGT+AGG	-	chr7.2:37782158-37782177	MS.gene77196:CDS	30.0%
!	CTATGGTTAGTTAGTTAGTT+AGG	-	chr7.2:37781872-37781891	MS.gene77196:intron	30.0%
!	TATGTCTTTTCCCTTTTGTA+GGG	-	chr7.2:37782159-37782178	MS.gene77196:CDS	30.0%
!!	CTCTACAGCTTTCTTTATTT+TGG	-	chr7.2:37781734-37781753	MS.gene77196:intron	30.0%
	AAGTCACAATTACCATTTCC+GGG	-	chr7.2:37781354-37781373	MS.gene77196:CDS	35.0%
	ACATGAATGAACATGGCAAT+TGG	+	chr7.2:37782093-37782112	None:intergenic	35.0%
	ACTCTACTATGAGTCACTAT+GGG	-	chr7.2:37781980-37781999	MS.gene77196:intron	35.0%
	ATAGCATAGGTGTATTCATG+TGG	+	chr7.2:37782012-37782031	None:intergenic	35.0%
	ATCAGCAAGAAAGATAGCAT+AGG	+	chr7.2:37782025-37782044	None:intergenic	35.0%
	ATCATTATGACCTTTATCCC+TGG	-	chr7.2:37782043-37782062	MS.gene77196:intron	35.0%
	ATTGACAACAAGTTTCCCAA+TGG	-	chr7.2:37782360-37782379	MS.gene77196:intron	35.0%
	TACTCTACTATGAGTCACTA+TGG	-	chr7.2:37781979-37781998	MS.gene77196:intron	35.0%
	TAGCATAGGTGTATTCATGT+GGG	+	chr7.2:37782011-37782030	None:intergenic	35.0%
	TCATTATGACCTTTATCCCT+GGG	-	chr7.2:37782044-37782063	MS.gene77196:intron	35.0%
	TCTAGCATCAGCAAAAAGAA+GGG	+	chr7.2:37781632-37781651	None:intergenic	35.0%
	TTATGAATCATGGAATCCCA+GGG	+	chr7.2:37782063-37782082	None:intergenic	35.0%
	TTCCCAATGGTTAAGACTTT+AGG	-	chr7.2:37782373-37782392	MS.gene77196:intron	35.0%
	TTCTAGCATCAGCAAAAAGA+AGG	+	chr7.2:37781633-37781652	None:intergenic	35.0%
!	GTTACTGAAATCCTTGCTAT+TGG	+	chr7.2:37781669-37781688	None:intergenic	35.0%
!	TACAAAGTCTTGTCGAATAG+TGG	-	chr7.2:37781457-37781476	MS.gene77196:intron	35.0%
!!	GGGAAACTTGTTGTCAATTA+CGG	+	chr7.2:37782358-37782377	None:intergenic	35.0%
	AAAGATCAAGAACCACCTAG+CGG	-	chr7.2:37782505-37782524	MS.gene77196:intron	40.0%
	ATCACTTATTGCGGAACAAC+AGG	+	chr7.2:37781433-37781452	None:intergenic	40.0%
	CAAACCTATGGATGATCCTT+TGG	-	chr7.2:37782546-37782565	MS.gene77196:intron	40.0%
	CAAAGGATCATCCATAGGTT+TGG	+	chr7.2:37782548-37782567	None:intergenic	40.0%
	GGAAGAGGCTAATAGGATAA+TGG	-	chr7.2:37782567-37782586	MS.gene77196:intron	40.0%
	GTTATGAATCATGGAATCCC+AGG	+	chr7.2:37782064-37782083	None:intergenic	40.0%
	GTTTGTTCATAGGCTACCAT+AGG	-	chr7.2:37782451-37782470	MS.gene77196:intron	40.0%
	TATTTGACAATGCCCGGAAA+TGG	+	chr7.2:37781369-37781388	None:intergenic	40.0%
	TCGAATAGTGGCTATAACAG+TGG	-	chr7.2:37781469-37781488	MS.gene77196:intron	40.0%
	TCTTCCAAAGGATCATCCAT+AGG	+	chr7.2:37782553-37782572	None:intergenic	40.0%
	TGCAAAGTATGCAAGTCCTA+TGG	+	chr7.2:37782470-37782489	None:intergenic	40.0%
	TGCCATGTTCATTCATGTAC+TGG	-	chr7.2:37782095-37782114	MS.gene77196:intron	40.0%
!	ATAGCTGCTGTTTGAAACAG+TGG	+	chr7.2:37782206-37782225	None:intergenic	40.0%
!	ATCCTATTAGCCTCTTCCAA+AGG	+	chr7.2:37782565-37782584	None:intergenic	40.0%
!	ATCCTTTGGAAGAGGCTAAT+AGG	-	chr7.2:37782560-37782579	MS.gene77196:intron	40.0%
!	ATCTGCTATTTGACAATGCC+CGG	+	chr7.2:37781375-37781394	None:intergenic	40.0%
!	TATGGATGATCCTTTGGAAG+AGG	-	chr7.2:37782552-37782571	MS.gene77196:intron	40.0%
!!	GAAATCCTTGCTATTGGTCT+TGG	+	chr7.2:37781663-37781682	None:intergenic	40.0%
!!!	ACAGGCAGTTTTTTCAATCG+CGG	+	chr7.2:37781548-37781567	None:intergenic	40.0%
	AAGATCAAGAACCACCTAGC+GGG	-	chr7.2:37782506-37782525	MS.gene77196:intron	45.0%
	AGGAACTACGACCAAACCTA+TGG	-	chr7.2:37782534-37782553	MS.gene77196:intron	45.0%
	CAATCGCGGATCACAGAAAA+TGG	+	chr7.2:37781534-37781553	None:intergenic	45.0%
	CTGTACCAAGACCAATAGCA+AGG	-	chr7.2:37781655-37781674	MS.gene77196:intron	45.0%
	GGCCAGTACATGAATGAACA+TGG	+	chr7.2:37782100-37782119	None:intergenic	45.0%
	GGTAAGGATGGAATTGATGC+AGG	-	chr7.2:37781313-37781332	MS.gene77196:CDS	45.0%
	GTTATAGCACTGCAGTGTAG+CGG	-	chr7.2:37781493-37781512	MS.gene77196:intron	45.0%
	TCATGGAATCCCAGGGATAA+AGG	+	chr7.2:37782056-37782075	None:intergenic	45.0%
!!	GCATGGAGAGTTGGTAAGGA+TGG	-	chr7.2:37781301-37781320	MS.gene77196:CDS	50.0%
	CAAGAACCACCTAGCGGGAA+TGG	-	chr7.2:37782511-37782530	MS.gene77196:intron	55.0%
	GTAGTTCCTCCATTCCCGCT+AGG	+	chr7.2:37782523-37782542	None:intergenic	55.0%
	GAACCACCTAGCGGGAATGG+AGG	-	chr7.2:37782514-37782533	MS.gene77196:intron	60.0%
	GTTCCTCCATTCCCGCTAGG+TGG	+	chr7.2:37782520-37782539	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	37781299	37782603	37781299	ID=MS.gene77196
chr7.2	mRNA	37781299	37782603	37781299	ID=MS.gene77196.t1;Parent=MS.gene77196
chr7.2	exon	37782589	37782603	37782589	ID=MS.gene77196.t1.exon1;Parent=MS.gene77196.t1
chr7.2	CDS	37782589	37782603	37782589	ID=cds.MS.gene77196.t1;Parent=MS.gene77196.t1
chr7.2	exon	37782147	37782251	37782147	ID=MS.gene77196.t1.exon2;Parent=MS.gene77196.t1
chr7.2	CDS	37782147	37782251	37782147	ID=cds.MS.gene77196.t1;Parent=MS.gene77196.t1
chr7.2	exon	37781299	37781439	37781299	ID=MS.gene77196.t1.exon3;Parent=MS.gene77196.t1
chr7.2	CDS	37781299	37781439	37781299	ID=cds.MS.gene77196.t1;Parent=MS.gene77196.t1

Gene Sequence

>MS.gene77196

ATGCATGGAGAGTTGGTAAGGATGGAATTGATGCAGGCACAAATCTAGTCCCTGTAAGTCACAATTACCATTTCCGGGCATTGTCAAATAGCAGATATTTGTGCTATATGGTAGCGGAATTTTAACAAATTCCTGTTGTTCCGCAATAAGTGATTTAGTACAAAGTCTTGTCGAATAGTGGCTATAACAGTGGCGTTATAGCACTGCAGTGTAGCGGAATTTGAACAAATCGCCATTTTCTGTGATCCGCGATTGAAAAAACTGCCTGTTGTTTTCAAGTTTTTTACAAGTACTAGAATACCTTCTAGTTTTTCATGTTTCTCTTTTCTTCCCTTCTTTTTGCTGATGCTAGAATTCTGTACCAAGACCAATAGCAAGGATTTCAGTAACTTTTGTGGCTCTGAGTGCTTTGCTTTTTGTGTTCAAGTCTCTCCTCTCTACAGCTTTCTTTATTTTGGTAAGTCATCCATTTTTCATATCATATTAAAATATCAGATTATTGTTTTAAAATTTTGTATTGCTATAGTATATATTAGAGTATAGTGAATAAACCATAGTTAGGTTATATGTAAACTATGGTTAGTTAGTTAGTTAGGTAGTTGTGAGTTAGTTAGACTAACTCACCCCTATAAATAAGTCTCAACTATTGTACTATCTTTCATCTTTTATCAAATCTAGTTTACTCTACTATGAGTCACTATGGGTATCTCCCACATGAATACACCTATGCTATCTTTCTTGCTGATCATTATGACCTTTATCCCTGGGATTCCATGATTCATAACATGAAACCAATTGCCATGTTCATTCATGTACTGGCCATATTATGTTATTAAAGGGAACTTGTGCATCGAAAAGAATATGTCTTTTCCCTTTTGTAGGGTTGAATTTTTTTTACTTAAAGCCACTGTTTCAAACAGCAGCTATGATTATAGCATAATTTGAACAAATCACTATTCTGCAATACGCTATTTAATACAAAGTATTGTCAAACAACGGCTATAGTTGTGCACTATAGTGTCTCAAAAATTTGAACAAATCACTAATTTCTGCAATCCGTAATTGACAACAAGTTTCCCAATGGTTAAGACTTTAGGATAGTTCTAAGCTTTAAACATCAATGCTATATTTTGTGGTTAACACAAGTACATTGTTTGTTCATAGGCTACCATAGGACTTGCATACTTTGCATACCTAGCATTCAATAAAGATCAAGAACCACCTAGCGGGAATGGAGGAACTACGACCAAACCTATGGATGATCCTTTGGAAGAGGCTAATAGGATAATGGATAAATACAAGTAG

Protein sequence

>MS.gene77196.t1

MHGELNSVPRPIARISVTFVALSALLFVFKSLLSTAFFILATIGLAYFAYLAFNKDQEPPSGNGGTTTKPMDDPLEEANRIMDKYK