Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89984.t1 | XP_003606253.1 | 97.3 | 484 | 13 | 0 | 147 | 630 | 26 | 509 | 2.60E-276 | 961.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89984.t1 | Q9FNJ9 | 68.0 | 447 | 129 | 4 | 182 | 623 | 44 | 481 | 1.7e-175 | 617.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89984.t1 | G7JKZ0 | 97.3 | 484 | 13 | 0 | 147 | 630 | 26 | 509 | 1.9e-276 | 961.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene89984 | 0.807731 | 4.38E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene89984 | 0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene89984 | 0.805095 | 1.57E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene89984 | 0.836988 | 6.77E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene89984 | 0.838924 | 2.15E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene89984 | 0.800256 | 1.57E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene89984 | 0.83833 | 3.07E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene89984 | 0.85342 | 2.42E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene89984 | 0.81528 | 1.00E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene89984 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene89984 | 0.892056 | 2.26E-74 | -1.69E-46 |
| MS.gene049633 | MS.gene89984 | 0.803492 | 3.40E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene89984 | 0.826181 | 3.12E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene89984 | 0.812547 | 4.01E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene89984 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene89984 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene89984 | 0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene89984 | 0.810817 | 9.55E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene89984 | 0.804034 | 2.62E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene89984 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene89984 | 0.857148 | 1.99E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene89984 | 0.831828 | 1.34E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene89984 | 0.8297 | 4.45E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene89984 | 0.831966 | 1.24E-55 | -1.69E-46 |
| MS.gene050690 | MS.gene89984 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene89984 | 0.816682 | 4.88E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene89984 | 0.818388 | 2.01E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene89984 | 0.901222 | 3.33E-78 | -1.69E-46 |
| MS.gene05080 | MS.gene89984 | 0.820006 | 8.61E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene89984 | 0.822089 | 2.85E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene89984 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene050871 | MS.gene89984 | 0.800331 | 1.52E-48 | -1.69E-46 |
| MS.gene050950 | MS.gene89984 | 0.814321 | 1.64E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene89984 | 0.825108 | 5.61E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene89984 | 0.845042 | 5.20E-59 | -1.69E-46 |
| MS.gene051228 | MS.gene89984 | 0.834455 | 2.97E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene89984 | 0.807841 | 4.15E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene89984 | 0.81022 | 1.28E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene89984 | 0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene89984 | 0.808574 | 2.90E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene89984 | 0.848946 | 4.43E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene89984 | 0.837942 | 3.86E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene89984 | 0.84149 | 4.60E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene89984 | 0.813279 | 2.77E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene89984 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene89984 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene89984 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene89984 | 0.821777 | 3.37E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene89984 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene89984 | 0.802478 | 5.51E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene89984 | 0.820571 | 6.39E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene89984 | 0.808852 | 2.53E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene89984 | 0.821388 | 4.15E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene89984 | 0.808471 | 3.05E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene89984 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene89984 | 0.820549 | 6.47E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene89984 | 0.810419 | 1.16E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene89984 | 0.826116 | 3.24E-54 | -1.69E-46 |
| MS.gene052986 | MS.gene89984 | 0.802214 | 6.24E-49 | -1.69E-46 |
| MS.gene052987 | MS.gene89984 | 0.807896 | 4.04E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene89984 | 0.816556 | 5.20E-52 | -1.69E-46 |
| MS.gene053117 | MS.gene89984 | 0.825941 | 3.56E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene89984 | 0.812126 | 4.96E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene89984 | 0.880091 | 7.30E-70 | -1.69E-46 |
| MS.gene053209 | MS.gene89984 | 0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene89984 | 0.85856 | 7.58E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene89984 | 0.850124 | 2.08E-60 | -1.69E-46 |
| MS.gene053420 | MS.gene89984 | -0.811125 | 8.19E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene89984 | 0.819217 | 1.30E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene89984 | 0.806513 | 7.93E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene89984 | 0.861769 | 8.13E-64 | -1.69E-46 |
| MS.gene053632 | MS.gene89984 | 0.835181 | 1.95E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene89984 | 0.818688 | 1.72E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene89984 | 0.853323 | 2.58E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene89984 | 0.800105 | 1.68E-48 | -1.69E-46 |
| MS.gene054600 | MS.gene89984 | 0.862135 | 6.28E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene89984 | 0.857367 | 1.71E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene89984 | -0.810721 | 1.00E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene89984 | 0.813843 | 2.08E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene89984 | 0.821352 | 4.23E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene89984 | 0.811485 | 6.84E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene89984 | 0.8585 | 7.89E-63 | -1.69E-46 |
| MS.gene055206 | MS.gene89984 | 0.840458 | 8.59E-58 | -1.69E-46 |
| MS.gene055212 | MS.gene89984 | 0.810717 | 1.00E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene89984 | 0.826658 | 2.40E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene89984 | 0.838822 | 2.29E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene89984 | 0.849497 | 3.11E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene89984 | 0.828655 | 7.97E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene89984 | 0.851064 | 1.13E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene89984 | 0.853843 | 1.83E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene89984 | 0.854287 | 1.36E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene89984 | 0.827225 | 1.76E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene89984 | 0.813995 | 1.93E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene89984 | 0.81328 | 2.77E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene89984 | 0.865896 | 4.23E-65 | -1.69E-46 |
| MS.gene056504 | MS.gene89984 | 0.820284 | 7.44E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene89984 | 0.833172 | 6.21E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene89984 | 0.812897 | 3.36E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene89984 | 0.855374 | 6.59E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene89984 | 0.808038 | 3.77E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene89984 | 0.839153 | 1.88E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene89984 | 0.856094 | 4.06E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene89984 | 0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene89984 | 0.869693 | 2.56E-66 | -1.69E-46 |
| MS.gene057416 | MS.gene89984 | 0.84227 | 2.87E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene89984 | 0.829788 | 4.23E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene89984 | 0.825164 | 5.44E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene89984 | 0.821002 | 5.09E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene89984 | 0.85098 | 1.20E-60 | -1.69E-46 |
| MS.gene058338 | MS.gene89984 | 0.824797 | 6.64E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene89984 | 0.811742 | 6.01E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene89984 | 0.845639 | 3.58E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene89984 | 0.81137 | 7.24E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene89984 | 0.868918 | 4.57E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene89984 | 0.853968 | 1.68E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene89984 | 0.847752 | 9.48E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene89984 | 0.832291 | 1.03E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene89984 | 0.838273 | 3.17E-57 | -1.69E-46 |
| MS.gene059029 | MS.gene89984 | 0.822115 | 2.81E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene89984 | 0.838267 | 3.18E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene89984 | 0.831828 | 1.34E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene89984 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene89984 | 0.84756 | 1.07E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene89984 | 0.865257 | 6.73E-65 | -1.69E-46 |
| MS.gene059865 | MS.gene89984 | 0.823525 | 1.32E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene89984 | 0.83772 | 4.40E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene89984 | 0.808305 | 3.31E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene89984 | 0.833767 | 4.41E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene89984 | 0.84734 | 1.23E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene89984 | 0.817531 | 3.14E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene89984 | 0.869672 | 2.60E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene89984 | 0.826768 | 2.26E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene89984 | 0.851855 | 6.76E-61 | -1.69E-46 |
| MS.gene060982 | MS.gene89984 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene89984 | 0.832093 | 1.15E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene89984 | 0.815031 | 1.14E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene89984 | 0.800963 | 1.13E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89984.t1 | MTR_4g055260 | 97.314 | 484 | 13 | 0 | 147 | 630 | 26 | 509 | 0.0 | 979 |
| MS.gene89984.t1 | MTR_4g055270 | 94.595 | 148 | 8 | 0 | 1 | 148 | 1 | 148 | 6.60e-93 | 283 |
| MS.gene89984.t1 | MTR_2g084925 | 77.703 | 148 | 32 | 1 | 1 | 148 | 1 | 147 | 1.89e-74 | 236 |
| MS.gene89984.t1 | MTR_2g013570 | 44.920 | 187 | 103 | 0 | 185 | 371 | 79 | 265 | 4.69e-50 | 176 |
| MS.gene89984.t1 | MTR_2g013570 | 46.341 | 164 | 88 | 0 | 185 | 348 | 79 | 242 | 1.88e-45 | 162 |
| MS.gene89984.t1 | MTR_2g013570 | 51.546 | 97 | 47 | 0 | 185 | 281 | 79 | 175 | 3.12e-26 | 106 |
| MS.gene89984.t1 | MTR_6g007350 | 50.000 | 88 | 44 | 0 | 185 | 272 | 36 | 123 | 2.07e-21 | 90.5 |
| MS.gene89984.t1 | MTR_7g446330 | 50.000 | 88 | 44 | 0 | 185 | 272 | 52 | 139 | 2.58e-21 | 90.9 |
| MS.gene89984.t1 | MTR_1g061670 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 3.25e-16 | 77.0 |
| MS.gene89984.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 4.10e-16 | 76.6 |
| MS.gene89984.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 4.10e-16 | 76.6 |
| MS.gene89984.t1 | MTR_7g103320 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 4.10e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89984.t1 | AT5G22620 | 68.009 | 447 | 129 | 4 | 182 | 623 | 44 | 481 | 0.0 | 631 |
| MS.gene89984.t1 | AT5G22620 | 68.009 | 447 | 129 | 4 | 182 | 623 | 44 | 481 | 0.0 | 631 |
| MS.gene89984.t1 | AT5G22620 | 68.009 | 447 | 129 | 4 | 182 | 623 | 44 | 481 | 0.0 | 631 |
| MS.gene89984.t1 | AT5G22620 | 67.494 | 443 | 129 | 5 | 182 | 623 | 44 | 472 | 0.0 | 614 |
| MS.gene89984.t1 | AT5G22620 | 66.591 | 443 | 120 | 4 | 182 | 623 | 44 | 459 | 0.0 | 606 |
| MS.gene89984.t1 | AT5G22620 | 66.591 | 443 | 120 | 4 | 182 | 623 | 44 | 459 | 0.0 | 606 |
| MS.gene89984.t1 | AT2G44860 | 71.429 | 147 | 38 | 1 | 1 | 147 | 1 | 143 | 3.37e-69 | 222 |
| MS.gene89984.t1 | AT2G44860 | 71.429 | 147 | 38 | 1 | 1 | 147 | 1 | 143 | 3.37e-69 | 222 |
| MS.gene89984.t1 | AT3G53020 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 3.09e-15 | 74.3 |
| MS.gene89984.t1 | AT2G36620 | 36.842 | 95 | 58 | 1 | 1 | 95 | 3 | 95 | 7.18e-15 | 73.2 |
| MS.gene89984.t1 | AT3G50520 | 29.630 | 162 | 109 | 5 | 188 | 345 | 16 | 176 | 5.62e-11 | 63.5 |
Find 174 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGAGAATGTAGAGTTAT+TGG | 0.166217 | 4.2:+48102631 | MS.gene89984:CDS |
| TCCTCAGTTGGTCTTGTAAT+AGG | 0.238461 | 4.2:-48107835 | None:intergenic |
| TTAAGCGATTAAGGCAAATA+TGG | 0.259672 | 4.2:-48105126 | None:intergenic |
| GCTTGGATCTTAGCAATCTT+TGG | 0.263538 | 4.2:-48101123 | None:intergenic |
| ATACCTGATTTAAGCGATTA+AGG | 0.268375 | 4.2:-48105135 | None:intergenic |
| AAAAGCCTGGCAATCCCTTT+TGG | 0.280013 | 4.2:+48107585 | MS.gene89984:CDS |
| ATGAATTCAGAACAGCATTA+TGG | 0.285681 | 4.2:+48107551 | MS.gene89984:CDS |
| TCTTCTTTCATTTAGTCCTT+TGG | 0.294396 | 4.2:+48103776 | MS.gene89984:intron |
| GAGAGCCACCGTCCGGTCTC+GGG | 0.309020 | 4.2:-48105102 | None:intergenic |
| ACTCTCTTTGCCACTTTCAA+TGG | 0.319254 | 4.2:-48102674 | None:intergenic |
| CCTGTTGCCGGAGGGAAATC+TGG | 0.327424 | 4.2:+48105477 | MS.gene89984:CDS |
| GGAATCCTCGGAAAGTAAAA+TGG | 0.330997 | 4.2:+48100874 | MS.gene89984:CDS |
| CTGATTACGCCTCTTCCCTT+AGG | 0.332020 | 4.2:-48107772 | None:intergenic |
| GTGATTCACCCCTGCTGGCT+TGG | 0.333600 | 4.2:-48101140 | None:intergenic |
| GGAGAGCCACCGTCCGGTCT+CGG | 0.339574 | 4.2:-48105103 | None:intergenic |
| AGAAAACCGCTGAAATCATT+TGG | 0.339933 | 4.2:+48103808 | MS.gene89984:CDS |
| CAAAGAGAGTGGTGCTTGTT+AGG | 0.341702 | 4.2:+48102687 | MS.gene89984:CDS |
| TATATTTAAACAATCCAAAA+AGG | 0.354844 | 4.2:+48107089 | MS.gene89984:CDS |
| TGCTCACAATGCTGTTAATC+AGG | 0.362385 | 4.2:+48104892 | MS.gene89984:CDS |
| TTGCCTTAATCGCTTAAATC+AGG | 0.367710 | 4.2:+48105132 | MS.gene89984:CDS |
| GAAAACCGCTGAAATCATTT+GGG | 0.370490 | 4.2:+48103809 | MS.gene89984:CDS |
| CGGTGAGCTTACCTGGGATA+TGG | 0.370501 | 4.2:-48106644 | None:intergenic |
| GAAGAGGGAAAAGCGAGATT+TGG | 0.378423 | 4.2:+48104731 | MS.gene89984:CDS |
| AGTCTCAGGCTGAGACTTCT+AGG | 0.383341 | 4.2:+48102786 | MS.gene89984:CDS |
| ACGCCTGGTTCACCTGTTGC+CGG | 0.383600 | 4.2:+48105465 | MS.gene89984:CDS |
| AGGCTGAAATGGAGGAAAAC+TGG | 0.383659 | 4.2:-48107506 | None:intergenic |
| CATCGGATATTTCATCCAAA+AGG | 0.385034 | 4.2:-48107600 | None:intergenic |
| CCTCAGTTGGTCTTGTAATA+GGG | 0.385522 | 4.2:-48107834 | None:intergenic |
| CCTCTTCCCTTAGGGCCATC+GGG | 0.388137 | 4.2:-48107763 | None:intergenic |
| GAAGAGAATGTAGAGTTATT+GGG | 0.390847 | 4.2:+48102632 | MS.gene89984:CDS |
| ATAGACAGACCTGGAGAAAC+AGG | 0.394054 | 4.2:-48102837 | None:intergenic |
| CAGATGGAGCTTTAAGTAGA+TGG | 0.394379 | 4.2:-48101330 | None:intergenic |
| TGAATTCAGAACAGCATTAT+GGG | 0.395369 | 4.2:+48107552 | MS.gene89984:CDS |
| GCCTCTTCCCTTAGGGCCAT+CGG | 0.403434 | 4.2:-48107764 | None:intergenic |
| ATGTACTCAGAGCAGTGTTC+AGG | 0.406442 | 4.2:+48102604 | MS.gene89984:CDS |
| GCTCTTGTTGCCACAGCAAT+TGG | 0.407190 | 4.2:+48104914 | MS.gene89984:CDS |
| GAACATGCTTGGTGTTATAC+AGG | 0.408528 | 4.2:+48106461 | MS.gene89984:CDS |
| TTCATCCAAAAGGGATTGCC+AGG | 0.409965 | 4.2:-48107590 | None:intergenic |
| CCAGATTTCCCTCCGGCAAC+AGG | 0.412487 | 4.2:-48105477 | None:intergenic |
| GTGAATCACACCACGCTAAC+AGG | 0.412925 | 4.2:+48101154 | MS.gene89984:CDS |
| CTAAGGGAAGAGGCGTAATC+AGG | 0.416834 | 4.2:+48107773 | MS.gene89984:CDS |
| ACTCAGGAATAATTTGTTGT+TGG | 0.422257 | 4.2:-48103839 | None:intergenic |
| TTTAACCATCCAGGCTGAAA+TGG | 0.424105 | 4.2:-48107517 | None:intergenic |
| TGCGATTCACATAGGACTAA+TGG | 0.424880 | 4.2:+48107663 | MS.gene89984:CDS |
| CATAAATTATACTGCACACT+TGG | 0.431161 | 4.2:+48107798 | MS.gene89984:CDS |
| TAAGCGATTAAGGCAAATAT+GGG | 0.435727 | 4.2:-48105125 | None:intergenic |
| ACAAGAGGCTGCAGATTGCT+TGG | 0.435741 | 4.2:+48107005 | MS.gene89984:CDS |
| ACTTTGATGCCTGTTTCTCC+AGG | 0.440476 | 4.2:+48102828 | MS.gene89984:CDS |
| TACATCGAACGATGATGAAT+CGG | 0.444206 | 4.2:-48102586 | None:intergenic |
| CGACTTCCCCGATGGCCCTA+AGG | 0.448276 | 4.2:+48107756 | MS.gene89984:CDS |
| TGATTACGCCTCTTCCCTTA+GGG | 0.450519 | 4.2:-48107771 | None:intergenic |
| GCCATTGCTCGGTCAAGTTA+AGG | 0.452356 | 4.2:-48107693 | None:intergenic |
| TAAAATGGACCAAGGCATAT+AGG | 0.453354 | 4.2:+48100889 | MS.gene89984:CDS |
| TAGGGTTTGTTGAAGGAAGA+GGG | 0.454048 | 4.2:+48104716 | MS.gene89984:intron |
| TAGCATCATTACGAACAAAC+TGG | 0.456216 | 4.2:-48099526 | None:intergenic |
| GTCTCAATAGAAGATTTGTT+AGG | 0.456589 | 4.2:-48106613 | None:intergenic |
| TAACTTGACCGAGCAATGGC+TGG | 0.457774 | 4.2:+48107696 | MS.gene89984:CDS |
| CTTGTTTCCTCCATTGAAAG+TGG | 0.458735 | 4.2:+48102664 | MS.gene89984:CDS |
| TACTAAGAAAGGTGAGTCTC+AGG | 0.462085 | 4.2:+48102772 | MS.gene89984:CDS |
| GAATCATTTCATCTTGATGC+AGG | 0.464848 | 4.2:+48107718 | MS.gene89984:CDS |
| TCTACTGTATACCCTGGTCA+TGG | 0.468506 | 4.2:+48099500 | MS.gene89984:CDS |
| TTCCTCCATTTCAGCCTGGA+TGG | 0.476357 | 4.2:+48107512 | MS.gene89984:CDS |
| TCCATCTGCTGTGCTTGCGC+CGG | 0.476430 | 4.2:+48101345 | MS.gene89984:CDS |
| ATCGGATATTTCATCCAAAA+GGG | 0.480025 | 4.2:-48107599 | None:intergenic |
| TCAACTTTATTTAACCATCC+AGG | 0.481598 | 4.2:-48107526 | None:intergenic |
| TTAGGGTTTGTTGAAGGAAG+AGG | 0.483503 | 4.2:+48104715 | MS.gene89984:intron |
| TTAGGCATGGGCAGAGTACA+TGG | 0.485010 | 4.2:+48102705 | MS.gene89984:CDS |
| TTTGTTAGGACTGCTAATTA+CGG | 0.487442 | 4.2:-48106599 | None:intergenic |
| CCTCCGGCAACAGGTGAACC+AGG | 0.488230 | 4.2:-48105468 | None:intergenic |
| ACAGCATTATGGGATCAATC+TGG | 0.491217 | 4.2:+48107562 | MS.gene89984:CDS |
| ATACTGCACACTTGGGAAGA+TGG | 0.493742 | 4.2:+48107806 | MS.gene89984:CDS |
| AATGCTGAAGGGAGGATTCA+AGG | 0.496684 | 4.2:+48102728 | MS.gene89984:CDS |
| GTGCACCCGCCTATATGCCT+TGG | 0.497127 | 4.2:-48100898 | None:intergenic |
| CAAGAGGCTGCAGATTGCTT+GGG | 0.497705 | 4.2:+48107006 | MS.gene89984:CDS |
| TTGCTAAGATCCAAGCCAGC+AGG | 0.500416 | 4.2:+48101130 | MS.gene89984:CDS |
| CTCTTTGCCACTTTCAATGG+AGG | 0.501348 | 4.2:-48102671 | None:intergenic |
| GATCTTAGCAATCTTTGGAA+TGG | 0.502280 | 4.2:-48101118 | None:intergenic |
| GCAGAAGGTGCGGAAGGAAG+CGG | 0.510082 | 4.2:+48101285 | MS.gene89984:CDS |
| AACTCTTCAACATCCTCAGT+TGG | 0.510224 | 4.2:-48107847 | None:intergenic |
| AGTACAAATCGATTTCCCTT+AGG | 0.513537 | 4.2:-48103866 | None:intergenic |
| CCCGATGGCCCTAAGGGAAG+AGG | 0.514495 | 4.2:+48107763 | MS.gene89984:CDS |
| AGATTCCTGTCGTATCTCTC+AGG | 0.514561 | 4.2:-48101075 | None:intergenic |
| GTCTCCTGATCTAGATTCAT+CGG | 0.516209 | 4.2:-48107617 | None:intergenic |
| TTCCAAACAACCAGGTTTGG+AGG | 0.519057 | 4.2:+48105021 | MS.gene89984:intron |
| TGATAGCAGGTCTGTTCTTG+TGG | 0.523560 | 4.2:+48104868 | MS.gene89984:CDS |
| TCCGGCGCAAGCACAGCAGA+TGG | 0.523709 | 4.2:-48101346 | None:intergenic |
| GGGATCGTGCTAGAAGCTGC+TGG | 0.524848 | 4.2:+48104828 | MS.gene89984:CDS |
| AAATCCTAGCTCATGATAGC+AGG | 0.525513 | 4.2:+48104855 | MS.gene89984:CDS |
| AAATGAGATTAGAGAAGTGT+TGG | 0.527939 | 4.2:+48099468 | None:intergenic |
| CAAACTGAAACTTACTTGAA+AGG | 0.530301 | 4.2:-48103889 | None:intergenic |
| ACATCGAACGATGATGAATC+GGG | 0.535001 | 4.2:-48102585 | None:intergenic |
| ACCGCCACCTTGATCTTCTC+CGG | 0.535052 | 4.2:-48101364 | None:intergenic |
| GACTTCCCCGATGGCCCTAA+GGG | 0.535234 | 4.2:+48107757 | MS.gene89984:CDS |
| GTGGTGTGATTCACCCCTGC+TGG | 0.542077 | 4.2:-48101145 | None:intergenic |
| GACAGCCATGGCCATATCCC+AGG | 0.542139 | 4.2:+48106633 | MS.gene89984:CDS |
| AGAGCCACCGTCCGGTCTCG+GGG | 0.543269 | 4.2:-48105101 | None:intergenic |
| GGGATCAATCTGGAAAAGCC+TGG | 0.546375 | 4.2:+48107572 | MS.gene89984:CDS |
| GCTGGATTTCACCCCGAGAC+CGG | 0.547070 | 4.2:+48105090 | MS.gene89984:CDS |
| ATATCCGATGAATCTAGATC+AGG | 0.548576 | 4.2:+48107613 | MS.gene89984:CDS |
| AGAGTGGTGCTTGTTAGGCA+TGG | 0.549142 | 4.2:+48102692 | MS.gene89984:CDS |
| CAAGAAGCAGAAGGTGCGGA+AGG | 0.551683 | 4.2:+48101279 | MS.gene89984:CDS |
| CTACTGTATACCCTGGTCAT+GGG | 0.551883 | 4.2:+48099501 | MS.gene89984:CDS |
| CAATTGTGGTGTAAGTGTGC+TGG | 0.553525 | 4.2:+48105072 | MS.gene89984:CDS |
| CAGACCTGCTATCATGAGCT+AGG | 0.555413 | 4.2:-48104859 | None:intergenic |
| GAGTGGTGCTTGTTAGGCAT+GGG | 0.556816 | 4.2:+48102693 | MS.gene89984:CDS |
| TCAAAATGAAGAGGAATCCT+CGG | 0.559408 | 4.2:+48100862 | MS.gene89984:CDS |
| TTATTCCTGAGTATGACCTA+AGG | 0.560311 | 4.2:+48103850 | MS.gene89984:CDS |
| GTTTGTTCGTAATGATGCTA+AGG | 0.562939 | 4.2:+48099529 | MS.gene89984:CDS |
| TGTCATCCTGCGATTCACAT+AGG | 0.563323 | 4.2:+48107655 | MS.gene89984:CDS |
| TATTCCTGAGTATGACCTAA+GGG | 0.563674 | 4.2:+48103851 | MS.gene89984:CDS |
| ATTAGTCCTATGTGAATCGC+AGG | 0.564925 | 4.2:-48107661 | None:intergenic |
| CCTGGTTCACCTGTTGCCGG+AGG | 0.565582 | 4.2:+48105468 | MS.gene89984:CDS |
| ATATGGGGAGAGCCACCGTC+CGG | 0.566177 | 4.2:-48105109 | None:intergenic |
| GCTTACCTGGGATATGGCCA+TGG | 0.566287 | 4.2:-48106638 | None:intergenic |
| CGGATTGTACTTGTTTGCAA+CGG | 0.567474 | 4.2:+48105519 | MS.gene89984:CDS |
| CAGAGTACATGGAATGCTGA+AGG | 0.569870 | 4.2:+48102716 | MS.gene89984:CDS |
| ACAAGAACTTCAAAATGAAG+AGG | 0.570899 | 4.2:+48100853 | MS.gene89984:CDS |
| AAATGATTCCAGCCATTGCT+CGG | 0.571401 | 4.2:-48107704 | None:intergenic |
| AGCGTCCTCGACTTCCCCGA+TGG | 0.572360 | 4.2:+48107748 | MS.gene89984:CDS |
| CAATCTTTGGAATGGCCTTG+AGG | 0.574848 | 4.2:-48101110 | None:intergenic |
| ACTTTACTTCAGAGCAATTG+TGG | 0.577088 | 4.2:+48105058 | MS.gene89984:CDS |
| TTATCCTGTGAGAGAGCTGT+GGG | 0.579291 | 4.2:+48104808 | MS.gene89984:CDS |
| ACAAACTGGATCCCATGACC+AGG | 0.582418 | 4.2:-48099512 | None:intergenic |
| GCTTGCGCCGGAGAAGATCA+AGG | 0.582872 | 4.2:+48101357 | MS.gene89984:CDS |
| TCTACCTCCAGATTTCCCTC+CGG | 0.583778 | 4.2:-48105484 | None:intergenic |
| AGTTGGTCTTGTAATAGGGA+TGG | 0.585922 | 4.2:-48107830 | None:intergenic |
| AACCATCCAGGCTGAAATGG+AGG | 0.587394 | 4.2:-48107514 | None:intergenic |
| CGATCCCACAGCTCTCTCAC+AGG | 0.588043 | 4.2:-48104812 | None:intergenic |
| AAGGCATATAGGCGGGTGCA+CGG | 0.588735 | 4.2:+48100900 | MS.gene89984:CDS |
| ATGGACCAAGGCATATAGGC+GGG | 0.589542 | 4.2:+48100893 | MS.gene89984:CDS |
| ATTTCCCTTAGGTCATACTC+AGG | 0.591208 | 4.2:-48103855 | None:intergenic |
| ATATAGGCGGGTGCACGGAA+AGG | 0.591224 | 4.2:+48100905 | MS.gene89984:CDS |
| TAGGGCCATCGGGGAAGTCG+AGG | 0.592788 | 4.2:-48107753 | None:intergenic |
| ATAACACCAAGCATGTTCAA+TGG | 0.594462 | 4.2:-48106456 | None:intergenic |
| TGTTCTTCTACTGTATACCC+TGG | 0.595309 | 4.2:+48099494 | MS.gene89984:CDS |
| GAACTATTAATGCAGACGCC+TGG | 0.601208 | 4.2:+48105450 | MS.gene89984:intron |
| GTTTGCAACGGATCTACTCA+AGG | 0.603864 | 4.2:+48105531 | MS.gene89984:CDS |
| ATTGAAAGTGGCAAAGAGAG+TGG | 0.607739 | 4.2:+48102676 | MS.gene89984:CDS |
| GATCAACCATTGAACATGCT+TGG | 0.608336 | 4.2:+48106450 | MS.gene89984:CDS |
| CTCTTCCCTTAGGGCCATCG+GGG | 0.609582 | 4.2:-48107762 | None:intergenic |
| AATCATTTCATCTTGATGCA+GGG | 0.611035 | 4.2:+48107719 | MS.gene89984:CDS |
| GATGAGCGGCAAGAAGCAGA+AGG | 0.613802 | 4.2:+48101270 | MS.gene89984:CDS |
| ATAAATTATACTGCACACTT+GGG | 0.614541 | 4.2:+48107799 | MS.gene89984:CDS |
| TGCTAAGATCCAAGCCAGCA+GGG | 0.615872 | 4.2:+48101131 | MS.gene89984:CDS |
| CCCTATTACAAGACCAACTG+AGG | 0.616960 | 4.2:+48107834 | MS.gene89984:CDS |
| CTGGTTCACCTGTTGCCGGA+GGG | 0.618360 | 4.2:+48105469 | MS.gene89984:CDS |
| TCTTACTGAGGAAGTCCTCA+AGG | 0.619553 | 4.2:+48101095 | MS.gene89984:CDS |
| GCCTTAACTTGACCGAGCAA+TGG | 0.620035 | 4.2:+48107692 | MS.gene89984:CDS |
| AAAACCGCTGAAATCATTTG+GGG | 0.626544 | 4.2:+48103810 | MS.gene89984:CDS |
| GATTTCACCCCGAGACCGGA+CGG | 0.629070 | 4.2:+48105094 | MS.gene89984:CDS |
| ATTATCCTGTGAGAGAGCTG+TGG | 0.631732 | 4.2:+48104807 | MS.gene89984:CDS |
| AGATCCCCAAATGATTTCAG+CGG | 0.632339 | 4.2:-48103814 | None:intergenic |
| AGAGTACATGGAATGCTGAA+GGG | 0.633308 | 4.2:+48102717 | MS.gene89984:CDS |
| GCGGCAAGAAGCAGAAGGTG+CGG | 0.634205 | 4.2:+48101275 | MS.gene89984:CDS |
| CTATGTTGAGACGAAGCAGA+AGG | 0.640264 | 4.2:+48107047 | MS.gene89984:CDS |
| ACAGACCTGAGAGATACGAC+AGG | 0.640425 | 4.2:+48101070 | MS.gene89984:CDS |
| GAGGTAGAGAAGCAAGTAAG+CGG | 0.642011 | 4.2:+48105499 | MS.gene89984:CDS |
| ATCTTCTATTGAGACAGCCA+TGG | 0.648332 | 4.2:+48106621 | MS.gene89984:CDS |
| TGCTTCGTCTCAACATAGCG+TGG | 0.649383 | 4.2:-48107042 | None:intergenic |
| TTAATCTCCCATAGGATGAG+CGG | 0.649799 | 4.2:+48101256 | MS.gene89984:intron |
| TGTTGAGACGAAGCAGAAGG+AGG | 0.653414 | 4.2:+48107050 | MS.gene89984:CDS |
| AAGCGATTAAGGCAAATATG+GGG | 0.655265 | 4.2:-48105124 | None:intergenic |
| GAAACAGGTACCAATTGCTG+TGG | 0.666188 | 4.2:-48104924 | None:intergenic |
| GCTAAGATCCAAGCCAGCAG+GGG | 0.666858 | 4.2:+48101132 | MS.gene89984:CDS |
| AAGAGAATAACCTGTTAGCG+TGG | 0.670988 | 4.2:-48101164 | None:intergenic |
| TTCACCCCGAGACCGGACGG+TGG | 0.674530 | 4.2:+48105097 | MS.gene89984:CDS |
| AATGGACCAAGGCATATAGG+CGG | 0.680334 | 4.2:+48100892 | MS.gene89984:CDS |
| GTACATGGAATGCTGAAGGG+AGG | 0.686892 | 4.2:+48102720 | MS.gene89984:CDS |
| TCGGAAAGTAAAATGGACCA+AGG | 0.688428 | 4.2:+48100881 | MS.gene89984:CDS |
| GCACGGAAAGGACATGACAC+AGG | 0.700411 | 4.2:+48100917 | MS.gene89984:CDS |
| GTTGCCGGAGGGAAATCTGG+AGG | 0.702980 | 4.2:+48105480 | MS.gene89984:CDS |
| ATCTACTCAAGGAAATACAG+AGG | 0.718527 | 4.2:+48105542 | MS.gene89984:CDS |
| ATACGACAGGAATCTTACTG+AGG | 0.719986 | 4.2:+48101083 | MS.gene89984:CDS |
| CAAACTGGATCCCATGACCA+GGG | 0.724383 | 4.2:-48099511 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 48099470 | 48107873 | 48099470 | ID=MS.gene89984 |
| chr4.2 | mRNA | 48099470 | 48107873 | 48099470 | ID=MS.gene89984.t1;Parent=MS.gene89984 |
| chr4.2 | exon | 48099470 | 48099550 | 48099470 | ID=MS.gene89984.t1.exon1;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48099470 | 48099550 | 48099470 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48100825 | 48100938 | 48100825 | ID=MS.gene89984.t1.exon2;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48100825 | 48100938 | 48100825 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48101039 | 48101175 | 48101039 | ID=MS.gene89984.t1.exon3;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48101039 | 48101175 | 48101039 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48101270 | 48101378 | 48101270 | ID=MS.gene89984.t1.exon4;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48101270 | 48101378 | 48101270 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48102575 | 48102849 | 48102575 | ID=MS.gene89984.t1.exon5;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48102575 | 48102849 | 48102575 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48103791 | 48103896 | 48103791 | ID=MS.gene89984.t1.exon6;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48103791 | 48103896 | 48103791 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48104719 | 48104935 | 48104719 | ID=MS.gene89984.t1.exon7;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48104719 | 48104935 | 48104719 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48105035 | 48105153 | 48105035 | ID=MS.gene89984.t1.exon8;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48105035 | 48105153 | 48105035 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48105465 | 48105563 | 48105465 | ID=MS.gene89984.t1.exon9;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48105465 | 48105563 | 48105465 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48106429 | 48106482 | 48106429 | ID=MS.gene89984.t1.exon10;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48106429 | 48106482 | 48106429 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48106556 | 48106654 | 48106556 | ID=MS.gene89984.t1.exon11;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48106556 | 48106654 | 48106556 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48107003 | 48107110 | 48107003 | ID=MS.gene89984.t1.exon12;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48107003 | 48107110 | 48107003 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| chr4.2 | exon | 48107499 | 48107873 | 48107499 | ID=MS.gene89984.t1.exon13;Parent=MS.gene89984.t1 |
| chr4.2 | CDS | 48107499 | 48107873 | 48107499 | ID=cds.MS.gene89984.t1;Parent=MS.gene89984.t1 |
| Gene Sequence |
| Protein sequence |
