AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034451.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034451.01.T02 MTR_6g068990 95.370 216 9 1 64 279 13 227 5.10e-147 411
MsG0680034451.01.T02 MTR_6g068990 72.043 279 20 4 1 279 1 221 3.68e-107 310
MsG0680034451.01.T02 MTR_6g068990 86.339 183 8 2 97 279 16 181 1.82e-93 274
MsG0680034451.01.T02 MTR_6g068990 85.207 169 8 2 111 279 1 152 2.81e-84 249
MsG0680034451.01.T01 MTR_6g068990 95.370 216 9 1 64 279 13 227 5.10e-147 411
MsG0680034451.01.T01 MTR_6g068990 72.043 279 20 4 1 279 1 221 3.68e-107 310
MsG0680034451.01.T01 MTR_6g068990 86.339 183 8 2 97 279 16 181 1.82e-93 274
MsG0680034451.01.T01 MTR_6g068990 85.207 169 8 2 111 279 1 152 2.81e-84 249
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034451.01.T02 AT1G73350 47.350 283 72 7 1 279 1 210 9.34e-54 174
MsG0680034451.01.T02 AT1G73350 46.643 283 72 7 1 279 1 208 1.31e-51 168
MsG0680034451.01.T02 AT1G73350 46.667 240 67 6 68 279 7 213 1.12e-40 140
MsG0680034451.01.T02 AT1G73350 51.596 188 57 4 96 279 31 188 8.47e-36 127
MsG0680034451.01.T02 AT1G73350 51.337 187 57 4 97 279 16 172 8.63e-36 126
MsG0680034451.01.T02 AT1G73350 51.337 187 57 4 97 279 16 172 8.63e-36 126
MsG0680034451.01.T02 AT1G73350 51.087 184 56 4 100 279 17 170 2.13e-34 122
MsG0680034451.01.T01 AT1G73350 47.350 283 72 7 1 279 1 210 9.34e-54 174
MsG0680034451.01.T01 AT1G73350 46.643 283 72 7 1 279 1 208 1.31e-51 168
MsG0680034451.01.T01 AT1G73350 46.667 240 67 6 68 279 7 213 1.12e-40 140
MsG0680034451.01.T01 AT1G73350 51.596 188 57 4 96 279 31 188 8.47e-36 127
MsG0680034451.01.T01 AT1G73350 51.337 187 57 4 97 279 16 172 8.63e-36 126
MsG0680034451.01.T01 AT1G73350 51.337 187 57 4 97 279 16 172 8.63e-36 126
MsG0680034451.01.T01 AT1G73350 51.087 184 56 4 100 279 17 170 2.13e-34 122

Find 10 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAAATCATAGTTGATTA+TGG 0.281143 6:-87855007 MsG0680034451.01.T01:exon
ACCTTTGGGGTCGGTAAGAT+TGG 0.364856 6:+87854960 None:intergenic
AAGAAGATAGATAGAGAGAA+TGG 0.425678 6:+87855054 None:intergenic
TGAGATGAGAGACACTGAAA+GGG 0.489570 6:+87855115 None:intergenic
AAATCATAGTTGATTATGGC+AGG 0.531760 6:-87855003 MsG0680034451.01.T01:exon
ATTATATATACCTTTGGGGT+CGG 0.541483 6:+87854951 None:intergenic
ATGAGATGAGAGACACTGAA+AGG 0.588462 6:+87855114 None:intergenic
GAGAATTATATATACCTTTG+GGG 0.622345 6:+87854947 None:intergenic
ACCAATCTTACCGACCCCAA+AGG 0.660181 6:-87854961 MsG0680034451.01.T01:intron
GAGATGAGAGACACTGAAAG+GGG 0.683928 6:+87855116 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTATATATATGTATTATT+TGG - Chr6:87854378-87854397 MsG0680034451.01.T01:intron 10.0%
!! ATAAAAAAAAAATGCATAAT+TGG - Chr6:87850403-87850422 MsG0680034451.01.T01:intron 10.0%
!! TAAAAAAAAAATGAAAATTG+AGG + Chr6:87849992-87850011 None:intergenic 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + Chr6:87852337-87852356 None:intergenic 10.0%
!!! TATTAATTTATGATTTTCTT+AGG - Chr6:87852289-87852308 MsG0680034451.01.T01:intron 10.0%
!!! TTTTGATTTTTATTGAATTT+TGG - Chr6:87850040-87850059 MsG0680034451.01.T01:CDS 10.0%
!! AAAAAAAAAAAAAGAAGAGA+AGG + Chr6:87850180-87850199 None:intergenic 15.0%
!! AGAATTGATTATATTATGTT+TGG - Chr6:87853895-87853914 MsG0680034451.01.T01:intron 15.0%
!! ATCATAAATATATTCAATTC+TGG + Chr6:87853573-87853592 None:intergenic 15.0%
!! CAAGATAAAAAAAAAAAAAC+TGG + Chr6:87855148-87855167 None:intergenic 15.0%
!! GAAGATAAATCATAAATTAT+TGG + Chr6:87853791-87853810 None:intergenic 15.0%
!! TCTCAAATAAAAGATTTAAA+AGG + Chr6:87853764-87853783 None:intergenic 15.0%
!! TGAGAAATAAAAAAATAATG+AGG - Chr6:87850697-87850716 MsG0680034451.01.T01:intron 15.0%
!! TTTAAATGTATGAAACATTT+AGG - Chr6:87855018-87855037 MsG0680034451.01.T01:five_prime_UTR 15.0%
!!! AAATGTAAGTGTTTTATAAA+AGG + Chr6:87851874-87851893 None:intergenic 15.0%
!!! AATTTTACAGATAAGAAATT+GGG - Chr6:87850079-87850098 MsG0680034451.01.T01:CDS 15.0%
!!! ACTGTTTTTTCTAAAATAAA+AGG + Chr6:87852548-87852567 None:intergenic 15.0%
!!! AGTTTTTCAATTTTTTACAT+TGG - Chr6:87852365-87852384 MsG0680034451.01.T01:intron 15.0%
!!! TAATTTTACAGATAAGAAAT+TGG - Chr6:87850078-87850097 MsG0680034451.01.T01:CDS 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG + Chr6:87852403-87852422 None:intergenic 15.0%
!!! TTTAAATCTTTTATTTGAGA+AGG - Chr6:87853764-87853783 MsG0680034451.01.T01:intron 15.0%
!! AAAAAAAATGCATAATTGGA+AGG - Chr6:87850407-87850426 MsG0680034451.01.T01:intron 20.0%
!! AAACTCTTTGAATTAATACT+CGG + Chr6:87852441-87852460 None:intergenic 20.0%
!! AACAAATTGATTAGAGAAAA+GGG + Chr6:87851337-87851356 None:intergenic 20.0%
!! AATATATTTATGATCCAGTA+AGG - Chr6:87853579-87853598 MsG0680034451.01.T01:intron 20.0%
!! ACAGTGTAAAGATAATATTT+AGG - Chr6:87853709-87853728 MsG0680034451.01.T01:intron 20.0%
!! ATATATTTATGATCCAGTAA+GGG - Chr6:87853580-87853599 MsG0680034451.01.T01:intron 20.0%
!! CTCTTTAAATTAATAATGTC+AGG - Chr6:87851979-87851998 MsG0680034451.01.T01:intron 20.0%
!! TAAAAAAATAATGAGGTAGA+AGG - Chr6:87850704-87850723 MsG0680034451.01.T01:intron 20.0%
!! TAAAGATAATATTTAGGAGT+GGG - Chr6:87853715-87853734 MsG0680034451.01.T01:intron 20.0%
!!! AATTTGCTACATTCTTAATA+GGG + Chr6:87850772-87850791 None:intergenic 20.0%
!!! AGATTAGATTTTTTTTATCG+TGG - Chr6:87854188-87854207 MsG0680034451.01.T01:intron 20.0%
!!! GTTTATTTTCCTTTTCATTA+GGG - Chr6:87853822-87853841 MsG0680034451.01.T01:intron 20.0%
!!! TAAGTGTTTTATAAAAGGTA+AGG + Chr6:87851869-87851888 None:intergenic 20.0%
!!! TATCTATATTTTTGCAATAC+AGG - Chr6:87854566-87854585 MsG0680034451.01.T01:intron 20.0%
!!! TCTCGTTTTTTATACAATAT+TGG + Chr6:87851661-87851680 None:intergenic 20.0%
!!! TTATAAAAGGTAAGGTATTT+CGG + Chr6:87851861-87851880 None:intergenic 20.0%
!!! TTGAGTTTTCAACATTTATT+TGG + Chr6:87852874-87852893 None:intergenic 20.0%
!!! TTTATTGAATTTTGGTTACT+GGG - Chr6:87850048-87850067 MsG0680034451.01.T01:CDS 20.0%
!!! TTTTATTGAATTTTGGTTAC+TGG - Chr6:87850047-87850066 MsG0680034451.01.T01:CDS 20.0%
!!! TTTTTCTAAAATAAAAGGCA+TGG + Chr6:87852543-87852562 None:intergenic 20.0%
! AAAAAAAAAACTGGCACATT+AGG + Chr6:87855139-87855158 None:intergenic 25.0%
! AAAAAAAAACTGGCACATTA+GGG + Chr6:87855138-87855157 None:intergenic 25.0%
! AAATATAGCTTCCATGAAAT+AGG + Chr6:87854306-87854325 None:intergenic 25.0%
! AACAAGTTTACAGGAAAATA+AGG - Chr6:87851185-87851204 MsG0680034451.01.T01:intron 25.0%
! AAGTAATTAGCTCATTGAAT+TGG - Chr6:87852922-87852941 MsG0680034451.01.T01:intron 25.0%
! AATGAAAAGGAAAATAAACG+AGG + Chr6:87853821-87853840 None:intergenic 25.0%
! ACATTAAAGTAGATTGAGAA+GGG - Chr6:87851686-87851705 MsG0680034451.01.T01:intron 25.0%
! AGAAAGGAAATGAACATAAA+AGG + Chr6:87853388-87853407 None:intergenic 25.0%
! AGAAGATATACTTACTTACT+TGG - Chr6:87850312-87850331 MsG0680034451.01.T01:CDS 25.0%
! AGGAGAATTATATATACCTT+TGG + Chr6:87849972-87849991 None:intergenic 25.0%
! AGTAAATGATACTATGGAAA+GGG - Chr6:87851148-87851167 MsG0680034451.01.T01:intron 25.0%
! ATAAGTAGCAATAACTTATC+AGG - Chr6:87854073-87854092 MsG0680034451.01.T01:intron 25.0%
! ATTGTATAAAAAACGAGATC+TGG - Chr6:87851663-87851682 MsG0680034451.01.T01:intron 25.0%
! CAACAAATTGATTAGAGAAA+AGG + Chr6:87851338-87851357 None:intergenic 25.0%
! CCAATGATTGCAATATATAA+CGG + Chr6:87851268-87851287 None:intergenic 25.0%
! CTATTAAGAATGTAGCAAAT+TGG - Chr6:87850771-87850790 MsG0680034451.01.T01:intron 25.0%
! GAGAATTATATATACCTTTG+GGG + Chr6:87849970-87849989 None:intergenic 25.0%
! GGAAATAGTAAATGATACTA+TGG - Chr6:87851142-87851161 MsG0680034451.01.T01:intron 25.0%
! GGAGAATTATATATACCTTT+GGG + Chr6:87849971-87849990 None:intergenic 25.0%
! GTAAAGATAATATTTAGGAG+TGG - Chr6:87853714-87853733 MsG0680034451.01.T01:intron 25.0%
! TAAATTAATAATGTCAGGAC+AGG - Chr6:87851984-87852003 MsG0680034451.01.T01:intron 25.0%
! TACCAATTAATGCAGTATAA+GGG - Chr6:87851067-87851086 MsG0680034451.01.T01:intron 25.0%
! TAGTAAATGATACTATGGAA+AGG - Chr6:87851147-87851166 MsG0680034451.01.T01:intron 25.0%
! TATATTTATGATCCAGTAAG+GGG - Chr6:87853581-87853600 MsG0680034451.01.T01:intron 25.0%
! TATTTCAATCCCTAATGAAA+AGG + Chr6:87853834-87853853 None:intergenic 25.0%
! TTAGGACCGAAAATTATAAA+GGG - Chr6:87852307-87852326 MsG0680034451.01.T01:intron 25.0%
! TTCAAATAGAATCCACTTTA+AGG - Chr6:87854041-87854060 MsG0680034451.01.T01:intron 25.0%
! TTCATTCAAACTAGTATGTT+TGG - Chr6:87853624-87853643 MsG0680034451.01.T01:intron 25.0%
! TTCTTAAAACTGCTTGAAAA+CGG - Chr6:87853534-87853553 MsG0680034451.01.T01:intron 25.0%
!! AACATACTAGTTTGAATGAA+TGG + Chr6:87853624-87853643 None:intergenic 25.0%
!! AGAATGTTTGACTTATTTAG+AGG - Chr6:87854958-87854977 MsG0680034451.01.T01:intron 25.0%
!! CTTTTCTCTAATCAATTTGT+TGG - Chr6:87851336-87851355 MsG0680034451.01.T01:intron 25.0%
!! GAATAAGCTTTGTAATTTGT+AGG - Chr6:87850731-87850750 MsG0680034451.01.T01:intron 25.0%
!! TCTTTACATGATTCAGTTTT+GGG - Chr6:87850983-87851002 MsG0680034451.01.T01:intron 25.0%
!! TTCAATGAGCTAATTACTTT+TGG + Chr6:87852921-87852940 None:intergenic 25.0%
!! TTCTTTACATGATTCAGTTT+TGG - Chr6:87850982-87851001 MsG0680034451.01.T01:intron 25.0%
!! TTTTCCTTTTTCCTATTTCA+TGG - Chr6:87854292-87854311 MsG0680034451.01.T01:intron 25.0%
!!! ACCATAACAAGTTGTTTTTT+TGG - Chr6:87851394-87851413 MsG0680034451.01.T01:intron 25.0%
!!! CAATTTGCTACATTCTTAAT+AGG + Chr6:87850773-87850792 None:intergenic 25.0%
!!! CCATAACAAGTTGTTTTTTT+GGG - Chr6:87851395-87851414 MsG0680034451.01.T01:intron 25.0%
!!! CGTTTATTTTCCTTTTCATT+AGG - Chr6:87853821-87853840 MsG0680034451.01.T01:intron 25.0%
!!! TGAAATACTGGTTTCAATTT+TGG - Chr6:87853847-87853866 MsG0680034451.01.T01:intron 25.0%
AAAAGAAGAAAATGAGGAGT+TGG - Chr6:87855052-87855071 MsG0680034451.01.T01:five_prime_UTR 30.0%
AAAAGGAAAATAAACGAGGA+TGG + Chr6:87853817-87853836 None:intergenic 30.0%
AAATCATAGTTGATTATGGC+AGG - Chr6:87849911-87849930 MsG0680034451.01.T01:three_prime_UTR 30.0%
AAGAAGATAGATAGAGAGAA+TGG + Chr6:87849863-87849882 None:intergenic 30.0%
AAGTACCATTGTAATGGTTA+TGG - Chr6:87851027-87851046 MsG0680034451.01.T01:intron 30.0%
ACAGATAAGAAATTGGGTAA+AGG - Chr6:87850085-87850104 MsG0680034451.01.T01:CDS 30.0%
ACTGTACATACCAAACAAAA+AGG - Chr6:87852085-87852104 MsG0680034451.01.T01:intron 30.0%
AGATGTATGTGAAAGAAACA+TGG + Chr6:87853424-87853443 None:intergenic 30.0%
AGTTAGGTTAAACTTGTAGA+AGG - Chr6:87851803-87851822 MsG0680034451.01.T01:CDS 30.0%
ATAATCGATGACAAGACAAT+AGG + Chr6:87852824-87852843 None:intergenic 30.0%
ATACTATGGAAAGGGAAATA+TGG - Chr6:87851156-87851175 MsG0680034451.01.T01:intron 30.0%
ATCACGTGTTAAAAAAGCTT+TGG + Chr6:87854269-87854288 None:intergenic 30.0%
ATTCTTAATAGGGAGTTCAA+AGG + Chr6:87850762-87850781 None:intergenic 30.0%
CAATTAGATCATTGTAACCA+AGG - Chr6:87851511-87851530 MsG0680034451.01.T01:intron 30.0%
CCGTTATATATTGCAATCAT+TGG - Chr6:87851265-87851284 MsG0680034451.01.T01:intron 30.0%
CTACCAATTAATGCAGTATA+AGG - Chr6:87851066-87851085 MsG0680034451.01.T01:intron 30.0%
CTTAGGACCGAAAATTATAA+AGG - Chr6:87852306-87852325 MsG0680034451.01.T01:intron 30.0%
CTTATCAGGCAAACTATTTA+AGG - Chr6:87854087-87854106 MsG0680034451.01.T01:intron 30.0%
CTTGGTTACAATGATCTAAT+TGG + Chr6:87851513-87851532 None:intergenic 30.0%
GACATTAAAGTAGATTGAGA+AGG - Chr6:87851685-87851704 MsG0680034451.01.T01:intron 30.0%
GATGTATGTGAAAGAAACAT+GGG + Chr6:87853423-87853442 None:intergenic 30.0%
GCAGAAATCATAGTTGATTA+TGG - Chr6:87849907-87849926 MsG0680034451.01.T01:three_prime_UTR 30.0%
GGTTGTAAAAGAAGAAAATG+AGG - Chr6:87855046-87855065 MsG0680034451.01.T01:five_prime_UTR 30.0%
GTACAGTAAATGTAAACAAG+AGG - Chr6:87852216-87852235 MsG0680034451.01.T01:intron 30.0%
GTATGAAACATTTAGGAAGA+AGG - Chr6:87855025-87855044 MsG0680034451.01.T01:five_prime_UTR 30.0%
GTGATGCTTCTATTACTAAT+CGG - Chr6:87854671-87854690 MsG0680034451.01.T01:intron 30.0%
TAAGGAGAATTTGTAGCTAT+TGG - Chr6:87854105-87854124 MsG0680034451.01.T01:intron 30.0%
TATCAGAATTCTCCTTAAAG+TGG + Chr6:87854056-87854075 None:intergenic 30.0%
TATCGTGGACAAATCTTAAT+AGG - Chr6:87854203-87854222 MsG0680034451.01.T01:intron 30.0%
TGTAAAAATAGAACTTCCGA+TGG + Chr6:87852850-87852869 None:intergenic 30.0%
TGTTTCTTTCACATACATCT+TGG - Chr6:87853424-87853443 MsG0680034451.01.T01:intron 30.0%
TTACAATGGTACTTTCATCA+AGG + Chr6:87851021-87851040 None:intergenic 30.0%
TTCATTAGGGATTGAAATAC+TGG - Chr6:87853835-87853854 MsG0680034451.01.T01:intron 30.0%
TTCCCTTATACTGCATTAAT+TGG + Chr6:87851072-87851091 None:intergenic 30.0%
! AAAAAAGCTTTGGTTTCATG+TGG + Chr6:87854259-87854278 None:intergenic 30.0%
! AAGCTAGAATTTGTAGCTTT+TGG + Chr6:87854023-87854042 None:intergenic 30.0%
! AGATATATGTTTTGCAATCG+CGG - Chr6:87850525-87850544 MsG0680034451.01.T01:intron 30.0%
! ATTGGTAGTTCAGATCTTTA+AGG + Chr6:87851054-87851073 None:intergenic 30.0%
! GGAGATCCCTTTATAATTTT+CGG + Chr6:87852316-87852335 None:intergenic 30.0%
! TATGTACCTATTTGTTACTG+TGG - Chr6:87850205-87850224 MsG0680034451.01.T01:CDS 30.0%
! TGGATTGATAACAAGTTTAC+AGG - Chr6:87851176-87851195 MsG0680034451.01.T01:intron 30.0%
! TGTCATCGATTATTATCCAT+CGG - Chr6:87852831-87852850 MsG0680034451.01.T01:intron 30.0%
! TGTTAAGATTGCTACTTATC+AGG - Chr6:87854155-87854174 MsG0680034451.01.T01:intron 30.0%
!! ATTATATATACCTTTGGGGT+CGG + Chr6:87849966-87849985 None:intergenic 30.0%
!! CCCAAAAAAACAACTTGTTA+TGG + Chr6:87851398-87851417 None:intergenic 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + Chr6:87852098-87852117 None:intergenic 30.0%
!! TGATGAAAGTACCATTGTAA+TGG - Chr6:87851021-87851040 MsG0680034451.01.T01:intron 30.0%
!! TTAGTAATAGAAGCATCACT+AGG + Chr6:87854670-87854689 None:intergenic 30.0%
!!! AATACTGGTTTCAATTTTGG+AGG - Chr6:87853850-87853869 MsG0680034451.01.T01:intron 30.0%
AAGGTCCATAACCATTACAA+TGG + Chr6:87851035-87851054 None:intergenic 35.0%
ACGACATAAACAGTGTTTAG+TGG - Chr6:87851426-87851445 MsG0680034451.01.T01:intron 35.0%
ACTACTGTGTTCATATGCAT+TGG - Chr6:87852172-87852191 MsG0680034451.01.T01:intron 35.0%
ACTATATCTCAAGGAGCAAA+TGG - Chr6:87853293-87853312 MsG0680034451.01.T01:intron 35.0%
AGAGATTCCTTCATTCCAAT+TGG + Chr6:87851095-87851114 None:intergenic 35.0%
ATACACTGAAACCAGAAAAC+AGG + Chr6:87854540-87854559 None:intergenic 35.0%
CATATATCTCCTCACTCATT+AGG + Chr6:87850514-87850533 None:intergenic 35.0%
CTTCAACCACAGTAACAAAT+AGG + Chr6:87850214-87850233 None:intergenic 35.0%
CTTTACCATTAGATACAGAG+CGG - Chr6:87854405-87854424 MsG0680034451.01.T01:intron 35.0%
CTTTCGTATCACTTTCTCAA+TGG - Chr6:87851121-87851140 MsG0680034451.01.T01:intron 35.0%
GCTTCCATGAAATAGGAAAA+AGG + Chr6:87854299-87854318 None:intergenic 35.0%
GGAATTACATGTGTTAGTGT+CGG - Chr6:87850428-87850447 MsG0680034451.01.T01:intron 35.0%
TAACGGAAGTTTGAGAAGAT+AGG + Chr6:87851251-87851270 None:intergenic 35.0%
TAGAAGGCTTATCTCTTGTT+TGG - Chr6:87851819-87851838 MsG0680034451.01.T01:CDS 35.0%
TCAAACTAGTATGTTTGGTC+TGG - Chr6:87853629-87853648 MsG0680034451.01.T01:intron 35.0%
TCTGTTAGCAATTCTCTGAA+TGG - Chr6:87851295-87851314 MsG0680034451.01.T01:intron 35.0%
TGACGATCTACTATATCTCA+AGG - Chr6:87853284-87853303 MsG0680034451.01.T01:intron 35.0%
TGATTGTAACCGCTTATGTA+GGG - Chr6:87852794-87852813 MsG0680034451.01.T01:intron 35.0%
TTACAACTTTGCCTTTGAGT+AGG - Chr6:87852686-87852705 MsG0680034451.01.T01:intron 35.0%
TTGATTGTAACCGCTTATGT+AGG - Chr6:87852793-87852812 MsG0680034451.01.T01:intron 35.0%
! AAAGTTTAAGTTTGCAGCCT+TGG - Chr6:87853257-87853276 MsG0680034451.01.T01:intron 35.0%
! AACAGACAAACAAAGCATTC+TGG + Chr6:87852974-87852993 None:intergenic 35.0%
! AAGGTAAGGTATTTCGGTAT+TGG + Chr6:87851855-87851874 None:intergenic 35.0%
! AAGGTTGATCTCTTAGCATA+TGG + Chr6:87850488-87850507 None:intergenic 35.0%
! AGAAGGCTTATCTCTTGTTT+GGG - Chr6:87851820-87851839 MsG0680034451.01.T01:CDS 35.0%
! AGGTAAGGTATTTCGGTATT+GGG + Chr6:87851854-87851873 None:intergenic 35.0%
!! ATGATTGATGATGTGCTTGA+TGG - Chr6:87854894-87854913 MsG0680034451.01.T01:intron 35.0%
!! TCAATTTGTTGGCTCTACTT+TGG - Chr6:87851347-87851366 MsG0680034451.01.T01:intron 35.0%
!! TGGCGTGTTTTGTTAAAAGA+AGG + Chr6:87852472-87852491 None:intergenic 35.0%
!!! ATGATTCAGTTTTGGGAGTT+GGG - Chr6:87850990-87851009 MsG0680034451.01.T01:intron 35.0%
!!! CAGACACAATTTTTTGTTCC+TGG - Chr6:87853450-87853469 MsG0680034451.01.T01:intron 35.0%
!!! TTTTTTACATTGGCCCAAGT+CGG - Chr6:87852375-87852394 MsG0680034451.01.T01:intron 35.0%
AAACCAGAAAACAGGCATAG+GGG + Chr6:87854532-87854551 None:intergenic 40.0%
AACCTTTCACCTAATGAGTG+AGG - Chr6:87850502-87850521 MsG0680034451.01.T01:intron 40.0%
AAGGGAACCAATTGGAATGA+AGG - Chr6:87851085-87851104 MsG0680034451.01.T01:intron 40.0%
AAGTTCTTCTCCCTGACTTA+AGG - Chr6:87850844-87850863 MsG0680034451.01.T01:intron 40.0%
AGATTAAACCTAAGCGACCA+AGG - Chr6:87854617-87854636 MsG0680034451.01.T01:intron 40.0%
AGTCAGGGAGAAGAACTTAA+AGG + Chr6:87850842-87850861 None:intergenic 40.0%
ATAGGTATGCCCTACATAAG+CGG + Chr6:87852806-87852825 None:intergenic 40.0%
ATGAGATGAGAGACACTGAA+AGG + Chr6:87849803-87849822 None:intergenic 40.0%
ATTTATGATCCAGTAAGGGG+AGG - Chr6:87853584-87853603 MsG0680034451.01.T01:intron 40.0%
CGCTCTGTATCTAATGGTAA+AGG + Chr6:87854407-87854426 None:intergenic 40.0%
CGGTTACAATCAATGTAGTC+AGG + Chr6:87852786-87852805 None:intergenic 40.0%
CGTCTGTGTTAGTACTTCAT+AGG + Chr6:87850340-87850359 None:intergenic 40.0%
CTCAAAGAAGAAAACCAGCA+AGG + Chr6:87850809-87850828 None:intergenic 40.0%
CTTAATAGGGAGTTCAAAGG+AGG + Chr6:87850759-87850778 None:intergenic 40.0%
GAAACCAGAAAACAGGCATA+GGG + Chr6:87854533-87854552 None:intergenic 40.0%
GTAATTTACGTTGAGTCCCA+AGG + Chr6:87852150-87852169 None:intergenic 40.0%
GTAGATTGAGAAGGGAAACA+CGG - Chr6:87851694-87851713 MsG0680034451.01.T01:intron 40.0%
GTGTACTTGCATAGCTATCT+TGG + Chr6:87853691-87853710 None:intergenic 40.0%
GTTCGTAAGAACCTACTCAA+AGG + Chr6:87852700-87852719 None:intergenic 40.0%
TGAAACCAGAAAACAGGCAT+AGG + Chr6:87854534-87854553 None:intergenic 40.0%
TGAGATGAGAGACACTGAAA+GGG + Chr6:87849802-87849821 None:intergenic 40.0%
TGCAGTATAAGGGAACCAAT+TGG - Chr6:87851077-87851096 MsG0680034451.01.T01:intron 40.0%
TGGGACTGTTATCTACAGAA+AGG + Chr6:87853404-87853423 None:intergenic 40.0%
TTGTATCAACCAGCCAATAG+AGG + Chr6:87853073-87853092 None:intergenic 40.0%
! ATATGTTTTGCAATCGCGGT+TGG - Chr6:87850529-87850548 MsG0680034451.01.T01:intron 40.0%
! TATTTCGGTATTGGGCCTTA+GGG + Chr6:87851846-87851865 None:intergenic 40.0%
! TTTTTACATTGGCCCAAGTC+GGG - Chr6:87852376-87852395 MsG0680034451.01.T01:intron 40.0%
!! AATGGTAAAGGTACTGATGC+AGG + Chr6:87854451-87854470 None:intergenic 40.0%
!! CCTAAAGTTGATAACTCTGC+CGG - Chr6:87854829-87854848 MsG0680034451.01.T01:intron 40.0%
!! TAGGAAGTATCAATCTCCTC+TGG - Chr6:87850922-87850941 MsG0680034451.01.T01:intron 40.0%
!!! CAGTCTATGCTTGTTTTTGC+TGG - Chr6:87854354-87854373 MsG0680034451.01.T01:intron 40.0%
!!! CATGATTCAGTTTTGGGAGT+TGG - Chr6:87850989-87851008 MsG0680034451.01.T01:intron 40.0%
!!! CTTGCTGGTTTTCTTCTTTG+AGG - Chr6:87850807-87850826 MsG0680034451.01.T01:intron 40.0%
!!! CTTGTTTTCTGTTTCTGCTG+CGG - Chr6:87851749-87851768 MsG0680034451.01.T01:intron 40.0%
!!! TCGTTTTTGGTCGATTTCGT+GGG - Chr6:87851617-87851636 MsG0680034451.01.T01:CDS 40.0%
!!! TGATTCAGTTTTGGGAGTTG+GGG - Chr6:87850991-87851010 MsG0680034451.01.T01:intron 40.0%
AAGCAGATGCAAGAAGTTGC+TGG - Chr6:87853091-87853110 MsG0680034451.01.T01:intron 45.0%
AATTACGTTGCAGCGAACCT+TGG - Chr6:87852130-87852149 MsG0680034451.01.T01:intron 45.0%
AATTGTCACCTTGTTGCCAG+AGG + Chr6:87850941-87850960 None:intergenic 45.0%
ACTAACACAGACGTGAACAC+CGG - Chr6:87850347-87850366 MsG0680034451.01.T01:intron 45.0%
ACTTGCCGCTCTGTATCTAA+TGG + Chr6:87854413-87854432 None:intergenic 45.0%
AGATGAAAGCAAGAGGTGAG+GGG + Chr6:87853197-87853216 None:intergenic 45.0%
AGCAGATGCAAGAAGTTGCT+GGG - Chr6:87853092-87853111 MsG0680034451.01.T01:intron 45.0%
AGCGTGGAGGTTATCTTCAT+GGG - Chr6:87853116-87853135 MsG0680034451.01.T01:intron 45.0%
AGTTCCTACGTAGGTTCGAT+TGG + Chr6:87852759-87852778 None:intergenic 45.0%
ATCAACCTGATCCCACTCTT+TGG + Chr6:87854490-87854509 None:intergenic 45.0%
ATCAATCTCCTCTGGCAACA+AGG - Chr6:87850930-87850949 MsG0680034451.01.T01:intron 45.0%
ATTACGTTGCAGCGAACCTT+GGG - Chr6:87852131-87852150 MsG0680034451.01.T01:intron 45.0%
CAGATGAAAGCAAGAGGTGA+GGG + Chr6:87853198-87853217 None:intergenic 45.0%
CCGGCAGAGTTATCAACTTT+AGG + Chr6:87854832-87854851 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG + Chr6:87852125-87852144 None:intergenic 45.0%
CGTCACTATTGGACAACACT+TGG - Chr6:87850666-87850685 MsG0680034451.01.T01:intron 45.0%
CTCCTCACTCATTAGGTGAA+AGG + Chr6:87850507-87850526 None:intergenic 45.0%
CTGGTGAAGGGATGTAAAGT+CGG + Chr6:87852736-87852755 None:intergenic 45.0%
GAAAGGGGTAAAACGAGAAG+AGG + Chr6:87849786-87849805 None:intergenic 45.0%
GAAGAGGACTAGGTCAAGTT+AGG - Chr6:87851787-87851806 MsG0680034451.01.T01:intron 45.0%
GACAGCAATCAGTGTTTGTC+AGG - Chr6:87854718-87854737 MsG0680034451.01.T01:intron 45.0%
GAGAAGATAGGTGTGTGTGT+GGG + Chr6:87851239-87851258 None:intergenic 45.0%
GAGATGAGAGACACTGAAAG+GGG + Chr6:87849801-87849820 None:intergenic 45.0%
GATCGCTCCTCAACTTTCTT+TGG + Chr6:87854745-87854764 None:intergenic 45.0%
GGAAAAATTCTGCCACGCTA+TGG - Chr6:87850553-87850572 MsG0680034451.01.T01:intron 45.0%
GGAGGTCAAAAGTGATCTAG+AGG - Chr6:87853868-87853887 MsG0680034451.01.T01:intron 45.0%
GGCTCAACACGTAATGGTAA+AGG + Chr6:87854463-87854482 None:intergenic 45.0%
GGCTTATTGCCTTCAAACCT+TGG + Chr6:87854637-87854656 None:intergenic 45.0%
GTCAGGACCAAAGAAAGTTG+AGG - Chr6:87854735-87854754 MsG0680034451.01.T01:intron 45.0%
GTCTGGATCGAAGAAAGTAG+AGG - Chr6:87854768-87854787 MsG0680034451.01.T01:intron 45.0%
TAAAGTCGGGGAACGTAACA+CGG + Chr6:87852722-87852741 None:intergenic 45.0%
TAACCTTTGCAACCATGCGT+TGG + Chr6:87850144-87850163 None:intergenic 45.0%
TAATGTGTCAGTGTCGTGTC+CGG + Chr6:87850369-87850388 None:intergenic 45.0%
TAGTAGATCGTCACTGTCCA+AGG + Chr6:87853277-87853296 None:intergenic 45.0%
TCATTGTAACCAAGGTAGCC+AGG - Chr6:87851519-87851538 MsG0680034451.01.T01:CDS 45.0%
TGAGAAGATAGGTGTGTGTG+TGG + Chr6:87851240-87851259 None:intergenic 45.0%
TGGTGAAGGGATGTAAAGTC+GGG + Chr6:87852735-87852754 None:intergenic 45.0%
TTGAGCCAAAGCCAAAGAGT+GGG - Chr6:87854476-87854495 MsG0680034451.01.T01:intron 45.0%
TTTCATGCAACCCTGACACT+GGG + Chr6:87854798-87854817 None:intergenic 45.0%
TTTCCAACGCATGGTTGCAA+AGG - Chr6:87850138-87850157 MsG0680034451.01.T01:CDS 45.0%
! AGACGTTACTTTCCAACGCA+TGG - Chr6:87850129-87850148 MsG0680034451.01.T01:CDS 45.0%
! GTATTTCGGTATTGGGCCTT+AGG + Chr6:87851847-87851866 None:intergenic 45.0%
! TATCTCTTGTTTGGGCCCTA+AGG - Chr6:87851828-87851847 MsG0680034451.01.T01:CDS 45.0%
! TTACCCCTATGCCTGTTTTC+TGG - Chr6:87854526-87854545 MsG0680034451.01.T01:intron 45.0%
! TTAGTGTCGGACACTGACAT+GGG - Chr6:87850441-87850460 MsG0680034451.01.T01:CDS 45.0%
!! AAAGTTGATAACTCTGCCGG+AGG - Chr6:87854832-87854851 MsG0680034451.01.T01:intron 45.0%
!! ACTTTGCTCTGGGTCGTTTT+TGG - Chr6:87851604-87851623 MsG0680034451.01.T01:CDS 45.0%
!! GGAGCTTTGTTTATCCTTGC+TGG - Chr6:87850792-87850811 MsG0680034451.01.T01:intron 45.0%
!! TGGGTTGGTGCTATAGAGAT+TGG - Chr6:87850460-87850479 MsG0680034451.01.T01:CDS 45.0%
!!! GTCGTTTTTGGTCGATTTCG+TGG - Chr6:87851616-87851635 MsG0680034451.01.T01:CDS 45.0%
!!! GTGGGCAGATCGAGTTTTTT+TGG - Chr6:87851635-87851654 MsG0680034451.01.T01:CDS 45.0%
!!! ATAATAAGATAATAATTTTT+CGG + Chr6:87852338-87852357 None:intergenic 5.0%
!!! TTTTTTTTTTAATGTTTTTA+CGG - Chr6:87850001-87850020 MsG0680034451.01.T01:three_prime_UTR 5.0%
!!! TTTTTTTTTTATATTTTTAC+TGG + Chr6:87850395-87850414 None:intergenic 5.0%
AAACAGGCATAGGGGTAAGC+TGG + Chr6:87854524-87854543 None:intergenic 50.0%
AAATTTGTCCGGTCCCGACT+TGG + Chr6:87852392-87852411 None:intergenic 50.0%
AACAGGCATAGGGGTAAGCT+GGG + Chr6:87854523-87854542 None:intergenic 50.0%
AACTCTGCCGGAGGATTACT+AGG - Chr6:87854841-87854860 MsG0680034451.01.T01:intron 50.0%
AAGATAGGTGTGTGTGTGGG+TGG + Chr6:87851236-87851255 None:intergenic 50.0%
AATTTGTCCGGTCCCGACTT+GGG + Chr6:87852391-87852410 None:intergenic 50.0%
ACCAATCTTACCGACCCCAA+AGG - Chr6:87849953-87849972 MsG0680034451.01.T01:three_prime_UTR 50.0%
ACCCAGCAGTACCTTAAGTC+AGG + Chr6:87850858-87850877 None:intergenic 50.0%
CAAAGCCAAAGAGTGGGATC+AGG - Chr6:87854482-87854501 MsG0680034451.01.T01:intron 50.0%
CAAGGAGCAAATGGAAGCTG+AGG - Chr6:87853302-87853321 MsG0680034451.01.T01:intron 50.0%
CATCTGAGCTAGCATATGCC+AGG + Chr6:87854867-87854886 None:intergenic 50.0%
CCAGATGAAAGCAAGAGGTG+AGG + Chr6:87853199-87853218 None:intergenic 50.0%
CCCAGCAGTACCTTAAGTCA+GGG + Chr6:87850857-87850876 None:intergenic 50.0%
CCTAAGCGACCAAGGTTTGA+AGG - Chr6:87854625-87854644 MsG0680034451.01.T01:intron 50.0%
CCTCACCTCTTGCTTTCATC+TGG - Chr6:87853196-87853215 MsG0680034451.01.T01:intron 50.0%
CCTTCAAACCTTGGTCGCTT+AGG + Chr6:87854628-87854647 None:intergenic 50.0%
CTATGGGGAAGAAGAGGACT+AGG - Chr6:87851777-87851796 MsG0680034451.01.T01:intron 50.0%
CTGCACGATAGCGTCACTAT+TGG - Chr6:87850655-87850674 MsG0680034451.01.T01:intron 50.0%
CTTTCATGCAACCCTGACAC+TGG + Chr6:87854799-87854818 None:intergenic 50.0%
GAGCACCAGATGAAAGCAAG+AGG + Chr6:87853204-87853223 None:intergenic 50.0%
GAGCGTGGAGGTTATCTTCA+TGG - Chr6:87853115-87853134 MsG0680034451.01.T01:intron 50.0%
GATGAAAGCAAGAGGTGAGG+GGG + Chr6:87853196-87853215 None:intergenic 50.0%
GCAGATGCAAGAAGTTGCTG+GGG - Chr6:87853093-87853112 MsG0680034451.01.T01:intron 50.0%
GCATCACTAGGAGCTTGCAT+TGG + Chr6:87854658-87854677 None:intergenic 50.0%
GGGATCTTGGCTTCCTCTAT+TGG - Chr6:87853057-87853076 MsG0680034451.01.T01:intron 50.0%
GGTGAAGGGATGTAAAGTCG+GGG + Chr6:87852734-87852753 None:intergenic 50.0%
GTTGAGCCAAAGCCAAAGAG+TGG - Chr6:87854475-87854494 MsG0680034451.01.T01:intron 50.0%
GTTGAGGAGCGATCTTTGTC+TGG - Chr6:87854751-87854770 MsG0680034451.01.T01:intron 50.0%
TAGAGGAACACCCAGTGTCA+GGG - Chr6:87854785-87854804 MsG0680034451.01.T01:CDS 50.0%
TATGATCCAGTAAGGGGAGG+TGG - Chr6:87853587-87853606 MsG0680034451.01.T01:intron 50.0%
TCAGGATCGAGTTCCTACGT+AGG + Chr6:87852768-87852787 None:intergenic 50.0%
TCCTGCGTCGCACTGAAAAA+CGG - Chr6:87853340-87853359 MsG0680034451.01.T01:intron 50.0%
TCTTGGCTTCCTCTATTGGC+TGG - Chr6:87853061-87853080 MsG0680034451.01.T01:intron 50.0%
TGACCTGTGCATTCAGAGCA+AGG + Chr6:87852495-87852514 None:intergenic 50.0%
TGTAAACCACCTCCCCTTAC+TGG + Chr6:87853596-87853615 None:intergenic 50.0%
! AGGTTCGATTGGCTGGTGAA+GGG + Chr6:87852748-87852767 None:intergenic 50.0%
! CTGATCCCACTCTTTGGCTT+TGG + Chr6:87854484-87854503 None:intergenic 50.0%
! GGCTTTGGCTCAACACGTAA+TGG + Chr6:87854469-87854488 None:intergenic 50.0%
! GTTAGTGTCGGACACTGACA+TGG - Chr6:87850440-87850459 MsG0680034451.01.T01:CDS 50.0%
! TAGGTTCGATTGGCTGGTGA+AGG + Chr6:87852749-87852768 None:intergenic 50.0%
! TGTTTTGCAATCGCGGTTGG+CGG - Chr6:87850532-87850551 MsG0680034451.01.T01:intron 50.0%
!! AAGAGCGTCGTTCAACGTCT+AGG - Chr6:87850903-87850922 MsG0680034451.01.T01:intron 50.0%
!! ACCTTTGGGGTCGGTAAGAT+TGG + Chr6:87849957-87849976 None:intergenic 50.0%
!! ACTTAAGGTACTGCTGGGTC+AGG - Chr6:87850859-87850878 MsG0680034451.01.T01:intron 50.0%
!! CCCTGACTTAAGGTACTGCT+GGG - Chr6:87850854-87850873 MsG0680034451.01.T01:intron 50.0%
!! TCCCTGACTTAAGGTACTGC+TGG - Chr6:87850853-87850872 MsG0680034451.01.T01:intron 50.0%
ACAGGCATAGGGGTAAGCTG+GGG + Chr6:87854522-87854541 None:intergenic 55.0%
ACGTTGAACGACGCTCTTCC+TGG + Chr6:87850901-87850920 None:intergenic 55.0%
AGAGCAAAGTCGAAGCACGG+CGG + Chr6:87851594-87851613 None:intergenic 55.0%
AGGAAGCCAAGATCCCTGTC+GGG + Chr6:87853053-87853072 None:intergenic 55.0%
AGGTGTGTGTGTGGGTGGTT+GGG + Chr6:87851231-87851250 None:intergenic 55.0%
ATCGTGCGATCCTACGAGCT+GGG + Chr6:87851552-87851571 None:intergenic 55.0%
CCAGCCAATCGAACCTACGT+AGG - Chr6:87852752-87852771 MsG0680034451.01.T01:intron 55.0%
CCCAGAGCAAAGTCGAAGCA+CGG + Chr6:87851597-87851616 None:intergenic 55.0%
CCGTGCTTCGACTTTGCTCT+GGG - Chr6:87851594-87851613 MsG0680034451.01.T01:CDS 55.0%
CCTACGTAGGTTCGATTGGC+TGG + Chr6:87852755-87852774 None:intergenic 55.0%
CCTGCGTCGCACTGAAAAAC+GGG - Chr6:87853341-87853360 MsG0680034451.01.T01:intron 55.0%
CCTGTGCATTCAGAGCAAGG+TGG + Chr6:87852492-87852511 None:intergenic 55.0%
GAACGACGCTCTTCCTGGTT+CGG + Chr6:87850896-87850915 None:intergenic 55.0%
GAGGAAGCCAAGATCCCTGT+CGG + Chr6:87853054-87853073 None:intergenic 55.0%
GCAGCTCTATGGGGAAGAAG+AGG - Chr6:87851771-87851790 MsG0680034451.01.T01:intron 55.0%
GCTATTGCAGCTCCATAGCG+TGG + Chr6:87850568-87850587 None:intergenic 55.0%
GGAAGAAACCTGTCCGAACC+AGG - Chr6:87850880-87850899 MsG0680034451.01.T01:intron 55.0%
GGAGGTTATCTTCATGGGCG+AGG - Chr6:87853121-87853140 MsG0680034451.01.T01:intron 55.0%
GGGTGGTTGGGGGATTAAGT+CGG + Chr6:87851219-87851238 None:intergenic 55.0%
GGTTATCTTCATGGGCGAGG+CGG - Chr6:87853124-87853143 MsG0680034451.01.T01:intron 55.0%
GTAGAGGAACACCCAGTGTC+AGG - Chr6:87854784-87854803 MsG0680034451.01.T01:CDS 55.0%
TAGGTGTGTGTGTGGGTGGT+TGG + Chr6:87851232-87851251 None:intergenic 55.0%
TGCCAGGCCTAGTAATCCTC+CGG + Chr6:87854851-87854870 None:intergenic 55.0%
TGTCGGACACTGACATGGGT+TGG - Chr6:87850445-87850464 MsG0680034451.01.T01:CDS 55.0%
TTCTGCTGCGGCAGCTCTAT+GGG - Chr6:87851761-87851780 MsG0680034451.01.T01:intron 55.0%
TTTCTGCTGCGGCAGCTCTA+TGG - Chr6:87851760-87851779 MsG0680034451.01.T01:intron 55.0%
! CCACCTTGCTCTGAATGCAC+AGG - Chr6:87852489-87852508 MsG0680034451.01.T01:intron 55.0%
! TCTGATAACGTGCCCCGACA+GGG - Chr6:87853037-87853056 MsG0680034451.01.T01:intron 55.0%
! TTCTGATAACGTGCCCCGAC+AGG - Chr6:87853036-87853055 MsG0680034451.01.T01:intron 55.0%
!! GTTTTTCAGTGCGACGCAGG+AGG + Chr6:87853341-87853360 None:intergenic 55.0%
AAAGTCGAAGCACGGCGGAG+TGG + Chr6:87851589-87851608 None:intergenic 60.0%
ACATTGGCCCAAGTCGGGAC+CGG - Chr6:87852381-87852400 MsG0680034451.01.T01:intron 60.0%
AGGATCGAGTCCCAGCTCGT+AGG - Chr6:87851539-87851558 MsG0680034451.01.T01:CDS 60.0%
CAAGAAGTTGCTGGGGAGCG+TGG - Chr6:87853100-87853119 MsG0680034451.01.T01:intron 60.0%
CAGCAGCGAACACAGACTCC+AGG + Chr6:87853471-87853490 None:intergenic 60.0%
GATCGTGCGATCCTACGAGC+TGG + Chr6:87851553-87851572 None:intergenic 60.0%
GCCGTGCTTCGACTTTGCTC+TGG - Chr6:87851593-87851612 MsG0680034451.01.T01:CDS 60.0%
GGAAGCCAAGATCCCTGTCG+GGG + Chr6:87853052-87853071 None:intergenic 60.0%
GGACTCGATCCTGGCTACCT+TGG + Chr6:87851531-87851550 None:intergenic 60.0%
GGTGTGTGTGTGGGTGGTTG+GGG + Chr6:87851230-87851249 None:intergenic 60.0%
GTGTGTGTGTGGGTGGTTGG+GGG + Chr6:87851229-87851248 None:intergenic 60.0%
TACGAGCTGGGACTCGATCC+TGG + Chr6:87851540-87851559 None:intergenic 60.0%
TCTGCTGCGGCAGCTCTATG+GGG - Chr6:87851762-87851781 MsG0680034451.01.T01:intron 60.0%
TGCCGGAGGATTACTAGGCC+TGG - Chr6:87854846-87854865 MsG0680034451.01.T01:intron 60.0%
!! ACGCTCTTCCTGGTTCGGAC+AGG + Chr6:87850891-87850910 None:intergenic 60.0%
!! CCCGTTTTTCAGTGCGACGC+AGG + Chr6:87853344-87853363 None:intergenic 60.0%
ACGTGCCCCGACAGGGATCT+TGG - Chr6:87853044-87853063 MsG0680034451.01.T01:intron 65.0%
GGCATAGGGGTAAGCTGGGG+TGG + Chr6:87854519-87854538 None:intergenic 65.0%
! GAAGTTGCTGGGGAGCGTGG+AGG - Chr6:87853103-87853122 MsG0680034451.01.T01:intron 65.0%
GAAGCACGGCGGAGTGGCTG+AGG + Chr6:87851583-87851602 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 87849761 87855175 87849761 ID=MsG0680034451.01;Name=MsG0680034451.01
Chr6 mRNA 87849761 87855175 87849761 ID=MsG0680034451.01.T01;Parent=MsG0680034451.01;Name=MsG0680034451.01.T01;_AED=0.44;_eAED=0.51;_QI=115|0.42|0.5|1|0.28|0.5|8|278|279
Chr6 exon 87854962 87855109 87854962 ID=MsG0680034451.01.T01:exon:18320;Parent=MsG0680034451.01.T01
Chr6 exon 87855160 87855175 87855160 ID=MsG0680034451.01.T01:exon:18319;Parent=MsG0680034451.01.T01
Chr6 five_prime_UTR 87855160 87855175 87855160 ID=MsG0680034451.01.T01:five_prime_utr;Parent=MsG0680034451.01.T01
Chr6 five_prime_UTR 87855011 87855109 87855011 ID=MsG0680034451.01.T01:five_prime_utr;Parent=MsG0680034451.01.T01
Chr6 CDS 87854962 87855010 87854962 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87854777 87854847 87854777 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87853985 87854055 87853985 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87851791 87851878 87851791 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87851512 87851675 87851512 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87850433 87850519 87850433 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 CDS 87850039 87850348 87850039 ID=MsG0680034451.01.T01:cds;Parent=MsG0680034451.01.T01
Chr6 three_prime_UTR 87849761 87850038 87849761 ID=MsG0680034451.01.T01:three_prime_utr;Parent=MsG0680034451.01.T01
Chr6 mRNA 87849761 87855139 87849761 ID=MsG0680034451.01.T02;Parent=MsG0680034451.01;Name=MsG0680034451.01.T02;_AED=0.43;_eAED=0.51;_QI=129|0.33|0.42|1|0.33|0.57|7|278|279
Chr6 exon 87854962 87855139 87854962 ID=MsG0680034451.01.T02:exon:18327;Parent=MsG0680034451.01.T02
Chr6 five_prime_UTR 87855011 87855139 87855011 ID=MsG0680034451.01.T02:five_prime_utr;Parent=MsG0680034451.01.T02
Chr6 CDS 87854962 87855010 87854962 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87854777 87854847 87854777 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87853985 87854055 87853985 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87851791 87851878 87851791 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87851512 87851675 87851512 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87850433 87850519 87850433 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 CDS 87850039 87850348 87850039 ID=MsG0680034451.01.T02:cds;Parent=MsG0680034451.01.T02
Chr6 three_prime_UTR 87849761 87850038 87849761 ID=MsG0680034451.01.T02:three_prime_utr;Parent=MsG0680034451.01.T02
Gene Sequence

>MsG0680034451.01.T02

ATGGCAGGAAGAGAAGTTCGTGAATACACCAATCTTACCGACCCCAAAGATAAGAAATTGGGTAAAGGAAAAGATAAGATTGATGATGAAGACGTTACTTTCCAACGCATGGTTGCAAAGGAAGAAACCTGTCCGAACCAGGAAGAGCGTCGTTCAACGTCTAGGAAGTATCAATCTCCTCTGGCAACAAGGGATCTTGGCTTCCTCTATTGGCTGGTTGATACAAGCAGATGCAAGAAGTTGCTGGGGAGCGTGGAGGTTATCTTCATGGGCGAGGCGTTTAAGTTTGCAGCCTTGGACAGTGACGATCTACTATATCTCAAGGAGCAAATGGAAGCTGAGGAAGATGCAGAACGCCTCCTGCGTCGCACTGAAAAACGGGCATTTGCTGCTTTTAAGATATCCTTTTATGTTCATTTCCTTTCTGTAGATAACAGTCCCATATACAGAGCGGCAAGTTTAGCAGATTCTTCACCTGCATCAGTACCTTTACCATTACGTGTTGAGCCAAAGCCAAAGAGTGGGATCAGGCAGCAAGATCTGCTGAAAAAAGTTGTTGAGATTAAACCTAAGCGACCAAGGTTTGAAGGCAATAAGCCAATGCAAGCTCCTAGTGATGCTTCTATTACTAATCGGCAGCATGATCGTGATAAGTTGAAAGACAGCAATCAGTGTTTGTCAGGACCAAAGAAAGTTGAGGAGCGATCTTTGTCTGGATCGAAGAAAGTAGAGGAACACCCAGTGTCAGGGTTGCATGAAAGTGAAACTAAGCCTAAAGTTGATAACTCTGCCGGAGGATTACTAGGCCTGGCATATGCTAGCTCAGATGACGATGAATGA

>MsG0680034451.01.T01

ATGGCAGGAAGAGAAGTTCGTGAATACACCAATCTTACCGACCCCAAAGATAAGAAATTGGGTAAAGGAAAAGATAAGATTGATGATGAAGACGTTACTTTCCAACGCATGGTTGCAAAGGAAGAAACCTGTCCGAACCAGGAAGAGCGTCGTTCAACGTCTAGGAAGTATCAATCTCCTCTGGCAACAAGGGATCTTGGCTTCCTCTATTGGCTGGTTGATACAAGCAGATGCAAGAAGTTGCTGGGGAGCGTGGAGGTTATCTTCATGGGCGAGGCGTTTAAGTTTGCAGCCTTGGACAGTGACGATCTACTATATCTCAAGGAGCAAATGGAAGCTGAGGAAGATGCAGAACGCCTCCTGCGTCGCACTGAAAAACGGGCATTTGCTGCTTTTAAGATATCCTTTTATGTTCATTTCCTTTCTGTAGATAACAGTCCCATATACAGAGCGGCAAGTTTAGCAGATTCTTCACCTGCATCAGTACCTTTACCATTACGTGTTGAGCCAAAGCCAAAGAGTGGGATCAGGCAGCAAGATCTGCTGAAAAAAGTTGTTGAGATTAAACCTAAGCGACCAAGGTTTGAAGGCAATAAGCCAATGCAAGCTCCTAGTGATGCTTCTATTACTAATCGGCAGCATGATCGTGATAAGTTGAAAGACAGCAATCAGTGTTTGTCAGGACCAAAGAAAGTTGAGGAGCGATCTTTGTCTGGATCGAAGAAAGTAGAGGAACACCCAGTGTCAGGGTTGCATGAAAGTGAAACTAAGCCTAAAGTTGATAACTCTGCCGGAGGATTACTAGGCCTGGCATATGCTAGCTCAGATGACGATGAATGA

Protein sequence

>MsG0680034451.01.T02

MAGREVREYTNLTDPKDKKLGKGKDKIDDEDVTFQRMVAKEETCPNQEERRSTSRKYQSPLATRDLGFLYWLVDTSRCKKLLGSVEVIFMGEAFKFAALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFYVHFLSVDNSPIYRAASLADSSPASVPLPLRVEPKPKSGIRQQDLLKKVVEIKPKRPRFEGNKPMQAPSDASITNRQHDRDKLKDSNQCLSGPKKVEERSLSGSKKVEEHPVSGLHESETKPKVDNSAGGLLGLAYASSDDDE*

>MsG0680034451.01.T01

MAGREVREYTNLTDPKDKKLGKGKDKIDDEDVTFQRMVAKEETCPNQEERRSTSRKYQSPLATRDLGFLYWLVDTSRCKKLLGSVEVIFMGEAFKFAALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFYVHFLSVDNSPIYRAASLADSSPASVPLPLRVEPKPKSGIRQQDLLKKVVEIKPKRPRFEGNKPMQAPSDASITNRQHDRDKLKDSNQCLSGPKKVEERSLSGSKKVEEHPVSGLHESETKPKVDNSAGGLLGLAYASSDDDE*