Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022176.01.T01 | XP_003607878.1 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 7.34E-124 | 356 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022176.01.T01 | Q93VA3 | 73.485 | 132 | 35 | 0 | 40 | 171 | 44 | 175 | 7.68E-73 | 219 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022176.01.T01 | A2Q293 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 3.51e-124 | 356 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047910.01 | MsG0480022176.01 | 0.822782 | 1.970201e-53 | 1.665330e-50 |
MsG0080048611.01 | MsG0480022176.01 | 0.808536 | 2.951313e-50 | 1.691810e-47 |
MsG0080048917.01 | MsG0480022176.01 | 0.810479 | 1.129358e-50 | 6.815009e-48 |
MsG0080048929.01 | MsG0480022176.01 | 0.838433 | 2.883454e-57 | 3.861712e-54 |
MsG0080048978.01 | MsG0480022176.01 | 0.830310 | 3.156826e-55 | 3.313504e-52 |
MsG0080049053.01 | MsG0480022176.01 | 0.824958 | 6.087382e-54 | 5.473505e-51 |
MsG0080049062.01 | MsG0480022176.01 | 0.803593 | 3.237373e-49 | 1.633413e-46 |
MsG0180000193.01 | MsG0480022176.01 | 0.846771 | 1.761972e-59 | 3.065686e-56 |
MsG0180000194.01 | MsG0480022176.01 | 0.840592 | 7.925709e-58 | 1.134309e-54 |
MsG0180000305.01 | MsG0480022176.01 | 0.825648 | 4.179209e-54 | 3.832213e-51 |
MsG0180000306.01 | MsG0480022176.01 | 0.830721 | 2.504455e-55 | 2.660753e-52 |
MsG0180000325.01 | MsG0480022176.01 | 0.856239 | 3.679319e-62 | 8.722998e-59 |
MsG0180000352.01 | MsG0480022176.01 | 0.823582 | 1.282039e-53 | 1.108380e-50 |
MsG0180001249.01 | MsG0480022176.01 | 0.808318 | 3.285810e-50 | 1.872883e-47 |
MsG0180001772.01 | MsG0480022176.01 | 0.808272 | 3.360321e-50 | 1.913104e-47 |
MsG0180002809.01 | MsG0480022176.01 | 0.818788 | 1.632571e-52 | 1.233906e-49 |
MsG0180003114.01 | MsG0480022176.01 | 0.803380 | 3.584000e-49 | 1.798294e-46 |
MsG0180003296.01 | MsG0480022176.01 | 0.850194 | 1.988031e-60 | 3.863114e-57 |
MsG0180003453.01 | MsG0480022176.01 | 0.810962 | 8.881435e-51 | 5.429496e-48 |
MsG0180003759.01 | MsG0480022176.01 | 0.814933 | 1.197002e-51 | 8.139346e-49 |
MsG0180003933.01 | MsG0480022176.01 | 0.826219 | 3.059090e-54 | 2.851020e-51 |
MsG0180003980.01 | MsG0480022176.01 | 0.814808 | 1.275675e-51 | 8.645700e-49 |
MsG0180003985.01 | MsG0480022176.01 | 0.810051 | 1.396715e-50 | 8.334366e-48 |
MsG0180004163.01 | MsG0480022176.01 | 0.804818 | 1.799513e-49 | 9.370473e-47 |
MsG0180004177.01 | MsG0480022176.01 | 0.829856 | 4.072564e-55 | 4.220001e-52 |
MsG0180004292.01 | MsG0480022176.01 | 0.828690 | 7.813769e-55 | 7.823626e-52 |
MsG0180004302.01 | MsG0480022176.01 | 0.812408 | 4.304924e-51 | 2.735064e-48 |
MsG0180004739.01 | MsG0480022176.01 | 0.800358 | 1.495993e-48 | 6.951863e-46 |
MsG0180004852.01 | MsG0480022176.01 | 0.821311 | 4.319954e-53 | 3.502060e-50 |
MsG0180005291.01 | MsG0480022176.01 | 0.820265 | 7.513404e-53 | 5.916552e-50 |
MsG0180005431.01 | MsG0480022176.01 | 0.809983 | 1.444623e-50 | 8.605173e-48 |
MsG0180005760.01 | MsG0480022176.01 | 0.802410 | 5.684055e-49 | 2.782457e-46 |
MsG0180005879.01 | MsG0480022176.01 | 0.827560 | 1.462326e-54 | 1.416667e-51 |
MsG0180006159.01 | MsG0480022176.01 | 0.812697 | 3.721328e-51 | 2.382317e-48 |
MsG0280006307.01 | MsG0480022176.01 | 0.806559 | 7.757254e-50 | 4.223484e-47 |
MsG0280006336.01 | MsG0480022176.01 | 0.821307 | 4.328633e-53 | 3.508777e-50 |
MsG0280010704.01 | MsG0480022176.01 | 0.813340 | 2.689021e-51 | 1.751401e-48 |
MsG0280011162.01 | MsG0480022176.01 | 0.826194 | 3.101157e-54 | 2.888247e-51 |
MsG0280011197.01 | MsG0480022176.01 | 0.809570 | 1.773054e-50 | 1.044693e-47 |
MsG0280011200.01 | MsG0480022176.01 | 0.806510 | 7.944595e-50 | 4.319989e-47 |
MsG0280011276.01 | MsG0480022176.01 | 0.814447 | 1.533361e-51 | 1.029139e-48 |
MsG0280011279.01 | MsG0480022176.01 | 0.835129 | 2.007939e-56 | 2.432563e-53 |
MsG0380012625.01 | MsG0480022176.01 | 0.806213 | 9.174261e-50 | 4.951281e-47 |
MsG0380014053.01 | MsG0480022176.01 | 0.815298 | 9.929980e-52 | 6.819971e-49 |
MsG0380014729.01 | MsG0480022176.01 | 0.816881 | 4.400574e-52 | 3.156265e-49 |
MsG0480019376.01 | MsG0480022176.01 | 0.811565 | 6.569648e-51 | 4.080315e-48 |
MsG0480021039.01 | MsG0480022176.01 | 0.810413 | 1.167248e-50 | 7.031069e-48 |
MsG0480021143.01 | MsG0480022176.01 | 0.809994 | 1.437243e-50 | 8.563634e-48 |
MsG0480021254.01 | MsG0480022176.01 | 0.824516 | 7.738565e-54 | 6.869921e-51 |
MsG0480021303.01 | MsG0480022176.01 | 0.824306 | 8.671776e-54 | 7.651360e-51 |
MsG0480021307.01 | MsG0480022176.01 | 0.807122 | 5.896769e-50 | 3.257404e-47 |
MsG0480021308.01 | MsG0480022176.01 | 0.806768 | 7.005471e-50 | 3.834643e-47 |
MsG0480021314.01 | MsG0480022176.01 | 0.806932 | 6.467970e-50 | 3.555531e-47 |
MsG0480021317.01 | MsG0480022176.01 | 0.811456 | 6.938500e-51 | 4.297140e-48 |
MsG0480021521.01 | MsG0480022176.01 | 0.819004 | 1.458033e-52 | 1.108712e-49 |
MsG0480021709.01 | MsG0480022176.01 | 0.803958 | 2.718973e-49 | 1.384777e-46 |
MsG0480022176.01 | MsG0480022286.01 | 0.823648 | 1.236901e-53 | 1.071439e-50 |
MsG0480022176.01 | MsG0480022295.01 | 0.837606 | 4.708185e-57 | 6.147706e-54 |
MsG0480022176.01 | MsG0480022296.01 | 0.804127 | 2.507885e-49 | 1.282771e-46 |
MsG0480022176.01 | MsG0480022366.01 | 0.818809 | 1.614394e-52 | 1.220851e-49 |
MsG0480022176.01 | MsG0480022417.01 | 0.828524 | 8.571887e-55 | 8.541538e-52 |
MsG0480022176.01 | MsG0480022466.01 | 0.824459 | 7.978459e-54 | 7.070819e-51 |
MsG0480022176.01 | MsG0480022584.01 | 0.810136 | 1.339450e-50 | 8.010118e-48 |
MsG0480022176.01 | MsG0480022665.01 | 0.834598 | 2.732211e-56 | 3.257978e-53 |
MsG0480022176.01 | MsG0480022837.01 | 0.821565 | 3.773368e-53 | 3.080843e-50 |
MsG0480022176.01 | MsG0480023298.01 | 0.816265 | 6.046262e-52 | 4.264239e-49 |
MsG0480022176.01 | MsG0480023371.01 | 0.800730 | 1.256599e-48 | 5.894476e-46 |
MsG0480022176.01 | MsG0480023482.01 | 0.800715 | 1.265553e-48 | 5.934036e-46 |
MsG0480022176.01 | MsG0480023483.01 | 0.814149 | 1.784182e-51 | 1.187836e-48 |
MsG0480022176.01 | MsG0480023502.01 | 0.801934 | 7.123046e-49 | 3.444644e-46 |
MsG0480022176.01 | MsG0480023749.01 | 0.803119 | 4.058246e-49 | 2.022653e-46 |
MsG0480022176.01 | MsG0480023881.01 | 0.826624 | 2.450013e-54 | 2.309795e-51 |
MsG0480022176.01 | MsG0480023993.01 | 0.800650 | 1.304936e-48 | 6.108974e-46 |
MsG0480022176.01 | MsG0580024054.01 | 0.809075 | 2.263360e-50 | 1.316076e-47 |
MsG0480022176.01 | MsG0580024327.01 | 0.827349 | 1.643589e-54 | 1.582811e-51 |
MsG0480022176.01 | MsG0580024571.01 | 0.822823 | 1.927043e-53 | 1.630773e-50 |
MsG0480022176.01 | MsG0580024875.01 | 0.810838 | 9.447772e-51 | 5.756309e-48 |
MsG0480022176.01 | MsG0580024982.01 | 0.837835 | 4.111616e-57 | 5.406965e-54 |
MsG0480022176.01 | MsG0580025513.01 | 0.830206 | 3.345612e-55 | 3.501529e-52 |
MsG0480022176.01 | MsG0580025738.01 | 0.821822 | 3.290927e-53 | 2.706676e-50 |
MsG0480022176.01 | MsG0580025983.01 | 0.807509 | 4.883170e-50 | 2.724956e-47 |
MsG0480022176.01 | MsG0580025997.01 | 0.804433 | 2.165832e-49 | 1.116521e-46 |
MsG0480022176.01 | MsG0580027095.01 | 0.810617 | 1.054611e-50 | 6.387441e-48 |
MsG0480022176.01 | MsG0580027983.01 | 0.809709 | 1.654709e-50 | 9.785848e-48 |
MsG0480022176.01 | MsG0580030203.01 | 0.813956 | 1.968838e-51 | 1.303883e-48 |
MsG0480022176.01 | MsG0680030290.01 | 0.835970 | 1.230137e-56 | 1.528479e-53 |
MsG0480022176.01 | MsG0680032055.01 | 0.856671 | 2.747754e-62 | 6.607987e-59 |
MsG0480022176.01 | MsG0780036064.01 | 0.812841 | 3.461199e-51 | 2.223983e-48 |
MsG0480022176.01 | MsG0780036068.01 | 0.809099 | 2.236351e-50 | 1.301252e-47 |
MsG0480022176.01 | MsG0780036909.01 | 0.841409 | 4.836720e-58 | 7.100930e-55 |
MsG0480022176.01 | MsG0780038496.01 | 0.819672 | 1.026925e-52 | 7.954226e-50 |
MsG0480022176.01 | MsG0780038839.01 | 0.823378 | 1.430499e-53 | 1.229497e-50 |
MsG0480022176.01 | MsG0780039596.01 | 0.813969 | 1.955130e-51 | 1.295296e-48 |
MsG0480022176.01 | MsG0780039860.01 | 0.804702 | 1.903312e-49 | 9.880456e-47 |
MsG0480022176.01 | MsG0780040072.01 | 0.817568 | 3.083065e-52 | 2.253193e-49 |
MsG0480022176.01 | MsG0780040158.01 | 0.800102 | 1.687358e-48 | 7.789905e-46 |
MsG0480022176.01 | MsG0780040159.01 | 0.809726 | 1.641222e-50 | 9.710397e-48 |
MsG0480022176.01 | MsG0780040315.01 | 0.817450 | 3.277166e-52 | 2.387492e-49 |
MsG0480022176.01 | MsG0780040567.01 | 0.801770 | 7.696592e-49 | 3.706477e-46 |
MsG0480022176.01 | MsG0780040644.01 | 0.822842 | 1.907619e-53 | 1.615163e-50 |
MsG0480022176.01 | MsG0780040804.01 | 0.810142 | 1.335271e-50 | 7.986327e-48 |
MsG0480022176.01 | MsG0780040884.01 | 0.848154 | 7.345474e-60 | 1.335473e-56 |
MsG0480022176.01 | MsG0780040894.01 | 0.801984 | 6.955896e-49 | 3.368027e-46 |
MsG0480022176.01 | MsG0780041106.01 | 0.816050 | 6.752565e-52 | 4.734538e-49 |
MsG0480022176.01 | MsG0780041289.01 | 0.824009 | 1.018265e-53 | 8.909274e-51 |
MsG0480022176.01 | MsG0880042889.01 | 0.818879 | 1.556782e-52 | 1.179633e-49 |
MsG0480022176.01 | MsG0880042895.01 | 0.811766 | 5.940802e-51 | 3.709311e-48 |
MsG0480022176.01 | MsG0880042921.01 | 0.815334 | 9.752578e-52 | 6.704768e-49 |
MsG0480022176.01 | MsG0880043032.01 | 0.839210 | 1.815641e-57 | 2.489900e-54 |
MsG0480022176.01 | MsG0880043148.01 | 0.824428 | 8.117346e-54 | 7.187413e-51 |
MsG0480022176.01 | MsG0880044352.01 | 0.867312 | 1.501150e-65 | 5.217957e-62 |
MsG0480022176.01 | MsG0880044440.01 | 0.820271 | 7.492434e-53 | 5.900948e-50 |
MsG0480022176.01 | MsG0880045246.01 | 0.812103 | 5.016370e-51 | 3.160783e-48 |
MsG0480022176.01 | MsG0880045252.01 | 0.845607 | 3.655056e-59 | 6.124047e-56 |
MsG0480022176.01 | MsG0880045778.01 | 0.824665 | 7.138098e-54 | 6.364949e-51 |
MsG0480022176.01 | MsG0880046040.01 | 0.818056 | 2.391516e-52 | 1.771335e-49 |
MsG0480022176.01 | MsG0880046104.01 | 0.835551 | 1.570738e-56 | 1.927221e-53 |
MsG0480022176.01 | MsG0880046151.01 | 0.812264 | 4.626945e-51 | 2.928224e-48 |
MsG0480022176.01 | MsG0880046462.01 | 0.825771 | 3.909574e-54 | 3.597546e-51 |
MsG0480022176.01 | MsG0880046854.01 | 0.821765 | 3.392404e-53 | 2.785464e-50 |
MsG0480022176.01 | MsG0880046866.01 | 0.807890 | 4.052935e-50 | 2.284038e-47 |
MsG0480022176.01 | MsG0880047536.01 | 0.822286 | 2.569920e-53 | 2.141794e-50 |
MsG0480022176.01 | MsG0880047567.01 | 0.841591 | 4.331735e-58 | 6.395497e-55 |
MsG0480022176.01 | MsG0880047616.01 | 0.828799 | 7.351965e-55 | 7.384416e-52 |
MsG0480022176.01 | MsG0880047628.01 | 0.825634 | 4.212202e-54 | 3.860878e-51 |
MsG0480022176.01 | MsG0880047661.01 | 0.830703 | 2.529979e-55 | 2.686388e-52 |
MsG0480022176.01 | MsG0880047669.01 | 0.812521 | 4.066816e-51 | 2.591463e-48 |
MsG0380015081.01 | MsG0480022176.01 | 0.800090 | 1.696336e-48 | 7.829125e-46 |
MsG0380015111.01 | MsG0480022176.01 | 0.807244 | 5.556945e-50 | 3.079623e-47 |
MsG0380015546.01 | MsG0480022176.01 | 0.805405 | 1.356257e-49 | 7.169317e-47 |
MsG0380015900.01 | MsG0480022176.01 | 0.809379 | 1.948379e-50 | 1.142191e-47 |
MsG0380016478.01 | MsG0480022176.01 | 0.803145 | 4.007911e-49 | 1.998928e-46 |
MsG0380016896.01 | MsG0480022176.01 | 0.818218 | 2.197971e-52 | 1.635270e-49 |
MsG0380016960.01 | MsG0480022176.01 | 0.804378 | 2.223249e-49 | 1.144556e-46 |
MsG0380017018.01 | MsG0480022176.01 | 0.807584 | 4.706703e-50 | 2.631338e-47 |
MsG0380017141.01 | MsG0480022176.01 | 0.833577 | 4.924705e-56 | 5.694771e-53 |
MsG0380017309.01 | MsG0480022176.01 | 0.835444 | 1.671764e-56 | 2.044684e-53 |
MsG0380017472.01 | MsG0480022176.01 | 0.827629 | 1.407391e-54 | 1.366109e-51 |
MsG0380017474.01 | MsG0480022176.01 | 0.827932 | 1.190593e-54 | 1.166043e-51 |
MsG0380017647.01 | MsG0480022176.01 | 0.829446 | 5.125737e-55 | 5.247032e-52 |
MsG0380017651.01 | MsG0480022176.01 | 0.843297 | 1.527925e-58 | 2.380121e-55 |
MsG0380017727.01 | MsG0480022176.01 | 0.830355 | 3.077308e-55 | 3.234509e-52 |
MsG0380017884.01 | MsG0480022176.01 | 0.800596 | 1.337912e-48 | 6.254712e-46 |
MsG0380017966.01 | MsG0480022176.01 | 0.831440 | 1.667016e-55 | 1.809109e-52 |
MsG0380018066.01 | MsG0480022176.01 | 0.821735 | 3.446987e-53 | 2.827815e-50 |
MsG0380018072.01 | MsG0480022176.01 | 0.806318 | 8.718375e-50 | 4.717601e-47 |
MsG0480018190.01 | MsG0480022176.01 | 0.813621 | 2.332765e-51 | 1.531008e-48 |
MsG0280007102.01 | MsG0480022176.01 | 0.809214 | 2.113835e-50 | 1.233719e-47 |
MsG0280007136.01 | MsG0480022176.01 | 0.821670 | 3.569311e-53 | 2.922794e-50 |
MsG0280007247.01 | MsG0480022176.01 | 0.800350 | 1.502189e-48 | 6.979050e-46 |
MsG0280007322.01 | MsG0480022176.01 | 0.801777 | 7.670860e-49 | 3.694820e-46 |
MsG0280008379.01 | MsG0480022176.01 | 0.807692 | 4.464760e-50 | 2.503187e-47 |
MsG0280008430.01 | MsG0480022176.01 | 0.817196 | 3.738066e-52 | 2.704163e-49 |
MsG0280008935.01 | MsG0480022176.01 | 0.820485 | 6.689202e-53 | 5.299706e-50 |
MsG0280009751.01 | MsG0480022176.01 | 0.810080 | 1.376789e-50 | 8.221363e-48 |
MsG0280009776.01 | MsG0480022176.01 | 0.800855 | 1.185074e-48 | 5.576827e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022176.01.T01 | MTR_4g083990 | 98.844 | 173 | 2 | 0 | 1 | 173 | 1 | 173 | 8.89e-128 | 356 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480022176.01.T01 | AT5G45040 | 73.485 | 132 | 35 | 0 | 40 | 171 | 44 | 175 | 7.83e-74 | 219 |
Find 42 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGCTTGCTTGTCTGATTTC+TGG | 0.156602 | 4:-69309387 | MsG0480022176.01.T01:CDS |
CTCTTTGGATATCTATTGTT+TGG | 0.198050 | 4:+69307124 | None:intergenic |
GGCTGAGTTTGTCAAGTTAC+AGG | 0.238541 | 4:-69306417 | MsG0480022176.01.T01:CDS |
GTCAAGTTACAGGCTGATAA+AGG | 0.319514 | 4:-69306407 | MsG0480022176.01.T01:CDS |
CAACCTGGAGTGGCGCAAAT+TGG | 0.326523 | 4:+69309121 | None:intergenic |
TGAACAATGTTGCTCCTCTT+TGG | 0.345483 | 4:+69307109 | None:intergenic |
CCACGAGGGCAGTGCACATT+TGG | 0.345899 | 4:-69306473 | MsG0480022176.01.T01:CDS |
TCTTTGGATATCTATTGTTT+GGG | 0.347185 | 4:+69307125 | None:intergenic |
ATCTACCGTGTCACGTACTA+TGG | 0.365275 | 4:-69306693 | MsG0480022176.01.T01:CDS |
GTGCACATTTGGTGCTCGTT+TGG | 0.375964 | 4:-69306462 | MsG0480022176.01.T01:CDS |
TCAGACAAGCAAGCTTCATT+TGG | 0.389961 | 4:+69309394 | None:intergenic |
CAATAATCCTGTCTCCATAA+AGG | 0.416161 | 4:-69309361 | MsG0480022176.01.T01:intron |
TTGTTCAGCCAAACATGTAT+TGG | 0.417027 | 4:-69307093 | MsG0480022176.01.T01:CDS |
AGATGAAGATATCAAGATAT+TGG | 0.420639 | 4:-69306438 | MsG0480022176.01.T01:CDS |
CGTGACATCCAATACATGTT+TGG | 0.423635 | 4:+69307085 | None:intergenic |
ATTACAGGATAACGTGAAAC+GGG | 0.448174 | 4:-69309245 | MsG0480022176.01.T01:intron |
CTAAAATGCAGAAGTTTGCT+TGG | 0.449090 | 4:-69306153 | MsG0480022176.01.T01:three_prime_UTR |
TATAGTTCTACGCAGGGGTT+TGG | 0.449832 | 4:-69306509 | MsG0480022176.01.T01:intron |
TCAAGTTACAGGCTGATAAA+GGG | 0.462996 | 4:-69306406 | MsG0480022176.01.T01:CDS |
TCTCCAATTTGCGCCACTCC+AGG | 0.479406 | 4:-69309124 | MsG0480022176.01.T01:intron |
GATTACAGGATAACGTGAAA+CGG | 0.480757 | 4:-69309246 | MsG0480022176.01.T01:intron |
ACCAATCCATAATGAAAAGA+TGG | 0.486136 | 4:+69306331 | None:intergenic |
CAATATGTGGAAGTTCCAAC+TGG | 0.497926 | 4:-69306185 | MsG0480022176.01.T01:three_prime_UTR |
GAAGTGAATACTTCAATATG+TGG | 0.522700 | 4:-69306198 | MsG0480022176.01.T01:three_prime_UTR |
TTGAAGTATTCACTTCTATG+AGG | 0.523286 | 4:+69306205 | None:intergenic |
AGAAAGGCAGCCGCAAGAGG+AGG | 0.570107 | 4:+69309154 | None:intergenic |
CCAAATGTGCACTGCCCTCG+TGG | 0.576137 | 4:+69306473 | None:intergenic |
CAACTTGGCTCCTCCTCTTG+CGG | 0.582072 | 4:-69309164 | MsG0480022176.01.T01:CDS |
AGCAGAAAGGCAGCCGCAAG+AGG | 0.590194 | 4:+69309151 | None:intergenic |
TGTATTGGATGTCACGATGC+AGG | 0.593033 | 4:-69307078 | MsG0480022176.01.T01:CDS |
AAAGAGTAACCAACCTGGAG+TGG | 0.599652 | 4:+69309111 | None:intergenic |
CGTGTCACGTACTATGGCAA+AGG | 0.616930 | 4:-69306687 | MsG0480022176.01.T01:CDS |
CAAACAATAGATATCCAAAG+AGG | 0.625176 | 4:-69307123 | MsG0480022176.01.T01:CDS |
CTATGGCAAAGGAAGAATGC+CGG | 0.626553 | 4:-69306676 | MsG0480022176.01.T01:intron |
AATTGGAGAAAATAGCAGAA+AGG | 0.628466 | 4:+69309138 | None:intergenic |
CTTTGCCATAGTACGTGACA+CGG | 0.648192 | 4:+69306688 | None:intergenic |
TATTCACAAAGGATTTACAA+AGG | 0.666724 | 4:-69306922 | MsG0480022176.01.T01:intron |
GGTAAAGAGTGCATGCCACG+AGG | 0.676403 | 4:-69306488 | MsG0480022176.01.T01:CDS |
GTAAAGAGTGCATGCCACGA+GGG | 0.681699 | 4:-69306487 | MsG0480022176.01.T01:CDS |
AGTTACAGGCTGATAAAGGG+TGG | 0.682583 | 4:-69306403 | MsG0480022176.01.T01:CDS |
GGGGTCAACTCTATTCACAA+AGG | 0.702168 | 4:-69306933 | MsG0480022176.01.T01:CDS |
ATTGGATGTCACGATGCAGG+TGG | 0.703936 | 4:-69307075 | MsG0480022176.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTATCAAAAAAACATAT+TGG | - | Chr4:69308177-69308196 | MsG0480022176.01.T01:intron | 10.0% |
!! | AAAAAAAAAACTCTACAATA+AGG | + | Chr4:69307825-69307844 | None:intergenic | 15.0% |
!! | ACATAACAATTAATATACTA+AGG | + | Chr4:69307860-69307879 | None:intergenic | 15.0% |
!! | CATTTCTAAATTAAATTGAA+GGG | + | Chr4:69307099-69307118 | None:intergenic | 15.0% |
!! | AAGCACTAAATTTATCAAAA+GGG | - | Chr4:69308682-69308701 | MsG0480022176.01.T01:intron | 20.0% |
!! | ACTTTGCATAAATTTCAATA+TGG | + | Chr4:69307572-69307591 | None:intergenic | 20.0% |
!! | ATATTGAAATTTATGCAAAG+TGG | - | Chr4:69307571-69307590 | MsG0480022176.01.T01:intron | 20.0% |
!! | CCATTTCTAAATTAAATTGA+AGG | + | Chr4:69307100-69307119 | None:intergenic | 20.0% |
!! | CTATATAGAGAAAATTGAAT+GGG | - | Chr4:69306698-69306717 | MsG0480022176.01.T01:CDS | 20.0% |
!! | TAAATGTTGTTCTATAGAAA+TGG | - | Chr4:69308839-69308858 | MsG0480022176.01.T01:intron | 20.0% |
!! | TCTATATAGAGAAAATTGAA+TGG | - | Chr4:69306697-69306716 | MsG0480022176.01.T01:CDS | 20.0% |
!! | TTAATAAGACATTTGATTAC+AGG | - | Chr4:69306314-69306333 | MsG0480022176.01.T01:three_prime_UTR | 20.0% |
!!! | AAAGCACTAAATTTATCAAA+AGG | - | Chr4:69308681-69308700 | MsG0480022176.01.T01:intron | 20.0% |
!!! | AAGAAAAAGCTTTGATTTAA+TGG | + | Chr4:69306832-69306851 | None:intergenic | 20.0% |
!!! | CCTTCAATTTAATTTAGAAA+TGG | - | Chr4:69307097-69307116 | MsG0480022176.01.T01:CDS | 20.0% |
!!! | GTCTTATTAATTATATTGTG+AGG | + | Chr4:69306304-69306323 | None:intergenic | 20.0% |
!!! | TTTTTTTAAAACTCAGTATC+CGG | + | Chr4:69306775-69306794 | None:intergenic | 20.0% |
! | AAGGAGAAAAAAAAAGGAAA+GGG | + | Chr4:69308618-69308637 | None:intergenic | 25.0% |
! | ACAAAACAAATAAGAGTGAA+TGG | + | Chr4:69306544-69306563 | None:intergenic | 25.0% |
! | AGATGAAGATATCAAGATAT+TGG | - | Chr4:69309136-69309155 | MsG0480022176.01.T01:CDS | 25.0% |
! | ATCAATGTTAAGATTGAAAG+AGG | + | Chr4:69307603-69307622 | None:intergenic | 25.0% |
! | CTATTCATATAAAATTGCTC+TGG | - | Chr4:69308763-69308782 | MsG0480022176.01.T01:intron | 25.0% |
! | TATTCACAAAGGATTTACAA+AGG | - | Chr4:69308652-69308671 | MsG0480022176.01.T01:intron | 25.0% |
! | TCTTTCAATCTTAACATTGA+TGG | - | Chr4:69307602-69307621 | MsG0480022176.01.T01:intron | 25.0% |
! | TCTTTGGATATCTATTGTTT+GGG | + | Chr4:69308452-69308471 | None:intergenic | 25.0% |
! | TGTGGAGAAATTTATAAGTA+TGG | - | Chr4:69307280-69307299 | MsG0480022176.01.T01:intron | 25.0% |
! | TTCTAAATTAAATTGAAGGG+AGG | + | Chr4:69307096-69307115 | None:intergenic | 25.0% |
!! | AGCATATTTTACTGTTTTAC+TGG | + | Chr4:69306871-69306890 | None:intergenic | 25.0% |
!! | TTGACTCGTTGAAAAAATTA+AGG | - | Chr4:69307147-69307166 | MsG0480022176.01.T01:intron | 25.0% |
!!! | AACAAATCAACTAGTTTTTC+AGG | - | Chr4:69307444-69307463 | MsG0480022176.01.T01:intron | 25.0% |
!!! | ATATATCTAGCTTTATGTTC+TGG | - | Chr4:69308562-69308581 | MsG0480022176.01.T01:intron | 25.0% |
!!! | ATTTATTTTTCCTCTTGAAC+TGG | + | Chr4:69308209-69308228 | None:intergenic | 25.0% |
!!! | ATTTTTTCAACGAGTCAATT+TGG | + | Chr4:69307145-69307164 | None:intergenic | 25.0% |
!!! | CATTGATTAGCTTTCATTTT+AGG | + | Chr4:69308789-69308808 | None:intergenic | 25.0% |
!!! | GAAACATCATTTTGTTTTGA+GGG | - | Chr4:69307236-69307255 | MsG0480022176.01.T01:intron | 25.0% |
!!! | GTTGCTAAATCATTTTTGTT+CGG | + | Chr4:69309210-69309229 | None:intergenic | 25.0% |
!!! | TGAAGTTAGTTTTTTAGTCT+TGG | - | Chr4:69307314-69307333 | MsG0480022176.01.T01:intron | 25.0% |
!!! | TGTTAGTATTTTTTCCTTCA+CGG | - | Chr4:69307877-69307896 | MsG0480022176.01.T01:intron | 25.0% |
!!! | TTTATTTTTCCTCTTGAACT+GGG | + | Chr4:69308208-69308227 | None:intergenic | 25.0% |
!!! | TTTTAGGATATTATTCCAGT+TGG | + | Chr4:69309407-69309426 | None:intergenic | 25.0% |
AAAATGAGTTTCAGCTAAGA+GGG | + | Chr4:69308112-69308131 | None:intergenic | 30.0% | |
AAACATCTTGGACATACATT+AGG | + | Chr4:69307206-69307225 | None:intergenic | 30.0% | |
AAACTGTAAAGAACCATCTT+AGG | - | Chr4:69306981-69307000 | MsG0480022176.01.T01:intron | 30.0% | |
AACTTAAAAACTCCCAAAGT+TGG | - | Chr4:69307359-69307378 | MsG0480022176.01.T01:intron | 30.0% | |
AATGTTAAGATTGAAAGAGG+TGG | + | Chr4:69307600-69307619 | None:intergenic | 30.0% | |
AATTGGAGAAAATAGCAGAA+AGG | + | Chr4:69306439-69306458 | None:intergenic | 30.0% | |
ACATCTCAAACATCTTCTTA+CGG | - | Chr4:69307949-69307968 | MsG0480022176.01.T01:intron | 30.0% | |
ACCAATCCATAATGAAAAGA+TGG | + | Chr4:69309246-69309265 | None:intergenic | 30.0% | |
AGCAATTTGAACAAAAAAGC+GGG | + | Chr4:69306507-69306526 | None:intergenic | 30.0% | |
AGGATAATCATTAAAGCAGA+AGG | + | Chr4:69308962-69308981 | None:intergenic | 30.0% | |
ATTAATCAGAATCCTGAGTA+TGG | + | Chr4:69308292-69308311 | None:intergenic | 30.0% | |
CAAACAATAGATATCCAAAG+AGG | - | Chr4:69308451-69308470 | MsG0480022176.01.T01:intron | 30.0% | |
CAAGGAGAAAAAAAAAGGAA+AGG | + | Chr4:69308619-69308638 | None:intergenic | 30.0% | |
CAATAACCATATGTATCGTA+AGG | - | Chr4:69308012-69308031 | MsG0480022176.01.T01:intron | 30.0% | |
CTCTTTGGATATCTATTGTT+TGG | + | Chr4:69308453-69308472 | None:intergenic | 30.0% | |
CTTACGATACATATGGTTAT+TGG | + | Chr4:69308014-69308033 | None:intergenic | 30.0% | |
GAAGTGAATACTTCAATATG+TGG | - | Chr4:69309376-69309395 | MsG0480022176.01.T01:CDS | 30.0% | |
GAGCAATTTGAACAAAAAAG+CGG | + | Chr4:69306508-69306527 | None:intergenic | 30.0% | |
GTTAAATCACAAACCTAAGA+TGG | + | Chr4:69306997-69307016 | None:intergenic | 30.0% | |
TAAAATGAGTTTCAGCTAAG+AGG | + | Chr4:69308113-69308132 | None:intergenic | 30.0% | |
TAAAGATGCCAAAAATTGTC+AGG | + | Chr4:69307483-69307502 | None:intergenic | 30.0% | |
TAATGTTCAAAGATCCTACA+TGG | + | Chr4:69307019-69307038 | None:intergenic | 30.0% | |
TATAACAACTTCAAGTCGAT+TGG | + | Chr4:69308371-69308390 | None:intergenic | 30.0% | |
TGGACATACATTAGGAATTT+AGG | + | Chr4:69307198-69307217 | None:intergenic | 30.0% | |
TGGTCAATCAACTTCTATAT+TGG | - | Chr4:69307715-69307734 | MsG0480022176.01.T01:intron | 30.0% | |
TTAAAAAAGAGTAACCAACC+TGG | + | Chr4:69306471-69306490 | None:intergenic | 30.0% | |
TTAATTATATTGTGAGGCTG+AGG | + | Chr4:69306298-69306317 | None:intergenic | 30.0% | |
TTGTACAAACTAGAAAGTAG+TGG | - | Chr4:69306590-69306609 | MsG0480022176.01.T01:intron | 30.0% | |
! | AGCAATGTCTTTTACCTTTA+TGG | + | Chr4:69306230-69306249 | None:intergenic | 30.0% |
! | ATATAGAAGTTGATTGACCA+AGG | + | Chr4:69307715-69307734 | None:intergenic | 30.0% |
! | GATGTTTGAGATGTAAACTA+AGG | + | Chr4:69307943-69307962 | None:intergenic | 30.0% |
! | TCCATCTTTTCATTATGGAT+TGG | - | Chr4:69309242-69309261 | MsG0480022176.01.T01:intron | 30.0% |
! | TCTCTTCCATCTTTTCATTA+TGG | - | Chr4:69309237-69309256 | MsG0480022176.01.T01:CDS | 30.0% |
! | TCTTTTCGAATTTGTGTAGA+CGG | - | Chr4:69308729-69308748 | MsG0480022176.01.T01:intron | 30.0% |
! | TTGAAGTATTCACTTCTATG+AGG | + | Chr4:69309372-69309391 | None:intergenic | 30.0% |
! | TTGTTTTCACTATAAAGCAG+GGG | + | Chr4:69307549-69307568 | None:intergenic | 30.0% |
!! | AGTCAAGTTTTTCAACAACT+TGG | - | Chr4:69306395-69306414 | MsG0480022176.01.T01:CDS | 30.0% |
!! | GAAAAAATTAAGGAGCATTG+TGG | - | Chr4:69307157-69307176 | MsG0480022176.01.T01:intron | 30.0% |
!! | GTTGTTTTCACTATAAAGCA+GGG | + | Chr4:69307550-69307569 | None:intergenic | 30.0% |
!!! | GGAAACATCATTTTGTTTTG+AGG | - | Chr4:69307235-69307254 | MsG0480022176.01.T01:intron | 30.0% |
AAATAAGAGTGAATGGCATG+GGG | + | Chr4:69306537-69306556 | None:intergenic | 35.0% | |
ACAAATAAGAGTGAATGGCA+TGG | + | Chr4:69306539-69306558 | None:intergenic | 35.0% | |
ACCCACATAAATAGATTGCA+GGG | + | Chr4:69307795-69307814 | None:intergenic | 35.0% | |
AGCCCAACTAATTTGGTATT+GGG | + | Chr4:69306675-69306694 | None:intergenic | 35.0% | |
AGCTAGATATATCATGCCAA+AGG | + | Chr4:69308554-69308573 | None:intergenic | 35.0% | |
ATTAAATTGAAGGGAGGACA+AGG | + | Chr4:69307090-69307109 | None:intergenic | 35.0% | |
ATTACAGGATAACGTGAAAC+GGG | - | Chr4:69306329-69306348 | MsG0480022176.01.T01:three_prime_UTR | 35.0% | |
CAAATAAGAGTGAATGGCAT+GGG | + | Chr4:69306538-69306557 | None:intergenic | 35.0% | |
CAAATAGTCATGAGCATGTA+AGG | - | Chr4:69308240-69308259 | MsG0480022176.01.T01:intron | 35.0% | |
CAATAATCCTGTCTCCATAA+AGG | - | Chr4:69306213-69306232 | MsG0480022176.01.T01:three_prime_UTR | 35.0% | |
CCAAAAATTGTCAGGATCAA+AGG | + | Chr4:69307475-69307494 | None:intergenic | 35.0% | |
CCATAAGGCATAAACTATGA+AGG | + | Chr4:69308982-69309001 | None:intergenic | 35.0% | |
CCTTCATAGTTTATGCCTTA+TGG | - | Chr4:69308979-69308998 | MsG0480022176.01.T01:intron | 35.0% | |
CTAGATATATCATGCCAAAG+GGG | + | Chr4:69308552-69308571 | None:intergenic | 35.0% | |
CTTACATGCTCATGACTATT+TGG | + | Chr4:69308242-69308261 | None:intergenic | 35.0% | |
CTTACTTAGACTTCAGACAT+AGG | - | Chr4:69308929-69308948 | MsG0480022176.01.T01:intron | 35.0% | |
GATTACAGGATAACGTGAAA+CGG | - | Chr4:69306328-69306347 | MsG0480022176.01.T01:three_prime_UTR | 35.0% | |
GCAAGTAGCAAGTGATAAAT+AGG | - | Chr4:69308313-69308332 | MsG0480022176.01.T01:intron | 35.0% | |
GCAATTTGAACAAAAAAGCG+GGG | + | Chr4:69306506-69306525 | None:intergenic | 35.0% | |
GCTAGATATATCATGCCAAA+GGG | + | Chr4:69308553-69308572 | None:intergenic | 35.0% | |
GGTTCTCATTACAGTGTTAA+TGG | - | Chr4:69307623-69307642 | MsG0480022176.01.T01:intron | 35.0% | |
GGTTTGTGATTTAACCATGT+AGG | - | Chr4:69307002-69307021 | MsG0480022176.01.T01:intron | 35.0% | |
GTCATGATACCAAATACCAT+TGG | + | Chr4:69307408-69307427 | None:intergenic | 35.0% | |
GTCTAAGTAAGACATCTTAC+CGG | + | Chr4:69308920-69308939 | None:intergenic | 35.0% | |
GTGTAACTCAAAGTAATGCA+AGG | - | Chr4:69306949-69306968 | MsG0480022176.01.T01:intron | 35.0% | |
TAAACAAGGAAATTCCGTGA+AGG | + | Chr4:69307894-69307913 | None:intergenic | 35.0% | |
TAGCCCAACTAATTTGGTAT+TGG | + | Chr4:69306676-69306695 | None:intergenic | 35.0% | |
TCAAGTTACAGGCTGATAAA+GGG | - | Chr4:69309168-69309187 | MsG0480022176.01.T01:CDS | 35.0% | |
TCCAAGATGTTTGTAAGTTC+AGG | - | Chr4:69307214-69307233 | MsG0480022176.01.T01:intron | 35.0% | |
TCCCTGCAATCTATTTATGT+GGG | - | Chr4:69307791-69307810 | MsG0480022176.01.T01:intron | 35.0% | |
TCCTGAACTTACAAACATCT+TGG | + | Chr4:69307218-69307237 | None:intergenic | 35.0% | |
TGAAGATATCATCATACCCA+AGG | + | Chr4:69308066-69308085 | None:intergenic | 35.0% | |
TGGGTATGATGATATCTTCA+AGG | - | Chr4:69308066-69308085 | MsG0480022176.01.T01:intron | 35.0% | |
TTGACTGTGTGAACTAAACA+AGG | + | Chr4:69307908-69307927 | None:intergenic | 35.0% | |
TTGTTCAGCCAAACATGTAT+TGG | - | Chr4:69308481-69308500 | MsG0480022176.01.T01:intron | 35.0% | |
! | AAAAACTCCCAAAGTTGGTT+CGG | - | Chr4:69307364-69307383 | MsG0480022176.01.T01:intron | 35.0% |
! | ATAGACTAGCCCAACTAATT+TGG | + | Chr4:69306682-69306701 | None:intergenic | 35.0% |
! | CAAGCAAACTTCTGCATTTT+AGG | + | Chr4:69309423-69309442 | None:intergenic | 35.0% |
! | CCTTTGATCCTGACAATTTT+TGG | - | Chr4:69307472-69307491 | MsG0480022176.01.T01:intron | 35.0% |
! | CTAAAATGCAGAAGTTTGCT+TGG | - | Chr4:69309421-69309440 | MsG0480022176.01.T01:five_prime_UTR | 35.0% |
! | TCTTTTACCTTTATGGAGAC+AGG | + | Chr4:69306223-69306242 | None:intergenic | 35.0% |
! | TGTTTTCACTATAAAGCAGG+GGG | + | Chr4:69307548-69307567 | None:intergenic | 35.0% |
! | TTTTGTTCGGTTTCAATGCT+TGG | + | Chr4:69309197-69309216 | None:intergenic | 35.0% |
!! | GGTTGTTTTCACTATAAAGC+AGG | + | Chr4:69307551-69307570 | None:intergenic | 35.0% |
!! | TTAGTCTTGGTCTGTTTCAA+TGG | - | Chr4:69307327-69307346 | MsG0480022176.01.T01:intron | 35.0% |
!!! | CCTTTTTTTTTCTCCTTGCA+GGG | - | Chr4:69308621-69308640 | MsG0480022176.01.T01:intron | 35.0% |
!!! | CGCTTTTAATTTCTTGAGTG+TGG | - | Chr4:69306255-69306274 | MsG0480022176.01.T01:three_prime_UTR | 35.0% |
!!! | CTTTTTTTTTCTCCTTGCAG+GGG | - | Chr4:69308622-69308641 | MsG0480022176.01.T01:intron | 35.0% |
!!! | TCCTTTTTTTTTCTCCTTGC+AGG | - | Chr4:69308620-69308639 | MsG0480022176.01.T01:intron | 35.0% |
AAGCCACGAACAAGACTTTA+AGG | + | Chr4:69307746-69307765 | None:intergenic | 40.0% | |
AATAGCTAACTAGCTAAGCG+AGG | + | Chr4:69308143-69308162 | None:intergenic | 40.0% | |
AATGAAACTCAGACCTAGAG+AGG | + | Chr4:69306650-69306669 | None:intergenic | 40.0% | |
AGATTGCAGGGACAAATACT+TGG | + | Chr4:69307783-69307802 | None:intergenic | 40.0% | |
ATAGCTAACTAGCTAAGCGA+GGG | + | Chr4:69308142-69308161 | None:intergenic | 40.0% | |
CAATATGTGGAAGTTCCAAC+TGG | - | Chr4:69309389-69309408 | MsG0480022176.01.T01:CDS | 40.0% | |
CCCCCAATACCAAATTAGTT+GGG | - | Chr4:69306670-69306689 | MsG0480022176.01.T01:intron | 40.0% | |
CCCTGCAAGGAGAAAAAAAA+AGG | + | Chr4:69308624-69308643 | None:intergenic | 40.0% | |
CCTAAGCTTAGCTAACCATA+AGG | + | Chr4:69308997-69309016 | None:intergenic | 40.0% | |
CGTGACATCCAATACATGTT+TGG | + | Chr4:69308492-69308511 | None:intergenic | 40.0% | |
CTCTCAATCAATCAGCATCA+GGG | + | Chr4:69307978-69307997 | None:intergenic | 40.0% | |
CTGATGAGTTAGCAAACCTT+GGG | - | Chr4:69308047-69308066 | MsG0480022176.01.T01:intron | 40.0% | |
CTTGAATTATGCACCTCTCT+AGG | - | Chr4:69306634-69306653 | MsG0480022176.01.T01:intron | 40.0% | |
GACCCACATAAATAGATTGC+AGG | + | Chr4:69307796-69307815 | None:intergenic | 40.0% | |
GCCCAACTAATTTGGTATTG+GGG | + | Chr4:69306674-69306693 | None:intergenic | 40.0% | |
GTAACGTGACTATGGATTTG+TGG | - | Chr4:69307262-69307281 | MsG0480022176.01.T01:intron | 40.0% | |
GTCAAGTTACAGGCTGATAA+AGG | - | Chr4:69309167-69309186 | MsG0480022176.01.T01:CDS | 40.0% | |
GTCCCTGCAATCTATTTATG+TGG | - | Chr4:69307790-69307809 | MsG0480022176.01.T01:intron | 40.0% | |
TAAAACTCAGTATCCGGCTA+AGG | + | Chr4:69306769-69306788 | None:intergenic | 40.0% | |
TAAGGACTGACTAATCCGAA+GGG | + | Chr4:69306751-69306770 | None:intergenic | 40.0% | |
TAAGGCCTCTACAAGCTAAA+AGG | + | Chr4:69307649-69307668 | None:intergenic | 40.0% | |
TAGACAAGATCTCCATACTC+AGG | - | Chr4:69308277-69308296 | MsG0480022176.01.T01:intron | 40.0% | |
TCAGACAAGCAAGCTTCATT+TGG | + | Chr4:69306183-69306202 | None:intergenic | 40.0% | |
TCCCCCAATACCAAATTAGT+TGG | - | Chr4:69306669-69306688 | MsG0480022176.01.T01:intron | 40.0% | |
TCTCTCAATCAATCAGCATC+AGG | + | Chr4:69307979-69307998 | None:intergenic | 40.0% | |
TGAACAATGTTGCTCCTCTT+TGG | + | Chr4:69308468-69308487 | None:intergenic | 40.0% | |
TGTTCGCCTTACGATACATA+TGG | + | Chr4:69308021-69308040 | None:intergenic | 40.0% | |
TTGGAAAATCCCAGTTCAAG+AGG | - | Chr4:69308196-69308215 | MsG0480022176.01.T01:intron | 40.0% | |
! | AAGCTTGCTTGTCTGATTTC+TGG | - | Chr4:69306187-69306206 | MsG0480022176.01.T01:three_prime_UTR | 40.0% |
! | AGTCATGTATAGTTCTACGC+AGG | - | Chr4:69309058-69309077 | MsG0480022176.01.T01:intron | 40.0% |
! | CCCAACTAATTTGGTATTGG+GGG | + | Chr4:69306673-69306692 | None:intergenic | 40.0% |
! | CCTTATGGTTAGCTAAGCTT+AGG | - | Chr4:69308994-69309013 | MsG0480022176.01.T01:intron | 40.0% |
! | CTAGAGAGGTGCATAATTCA+AGG | + | Chr4:69306636-69306655 | None:intergenic | 40.0% |
! | GCTTTTGCAACAGATGTTGA+TGG | + | Chr4:69307526-69307545 | None:intergenic | 40.0% |
! | GTCATGTATAGTTCTACGCA+GGG | - | Chr4:69309059-69309078 | MsG0480022176.01.T01:intron | 40.0% |
! | TCATGTATAGTTCTACGCAG+GGG | - | Chr4:69309060-69309079 | MsG0480022176.01.T01:intron | 40.0% |
! | TGCTGATTGATTGAGAGAGA+CGG | - | Chr4:69307981-69308000 | MsG0480022176.01.T01:intron | 40.0% |
!! | ACGAACAAGACTTTAAGGCT+CGG | + | Chr4:69307741-69307760 | None:intergenic | 40.0% |
!!! | AATGGCCTTTTAGCTTGTAG+AGG | - | Chr4:69307641-69307660 | MsG0480022176.01.T01:intron | 40.0% |
!!! | TCTGAGGGTCGTTTTATTTG+TGG | - | Chr4:69307677-69307696 | MsG0480022176.01.T01:intron | 40.0% |
AAAACGACCCTCAGAATCCT+TGG | + | Chr4:69307672-69307691 | None:intergenic | 45.0% | |
AAAGAGTAACCAACCTGGAG+TGG | + | Chr4:69306466-69306485 | None:intergenic | 45.0% | |
AATTTGGCCAGGGGAAAGTT+TGG | + | Chr4:69307129-69307148 | None:intergenic | 45.0% | |
AGTTACAGGCTGATAAAGGG+TGG | - | Chr4:69309171-69309190 | MsG0480022176.01.T01:CDS | 45.0% | |
ATCTACCGTGTCACGTACTA+TGG | - | Chr4:69308881-69308900 | MsG0480022176.01.T01:intron | 45.0% | |
ATTTGGCCAGGGGAAAGTTT+GGG | + | Chr4:69307128-69307147 | None:intergenic | 45.0% | |
CAGGGACAAATACTTGGTTC+TGG | + | Chr4:69307777-69307796 | None:intergenic | 45.0% | |
CTAAGGACTGACTAATCCGA+AGG | + | Chr4:69306752-69306771 | None:intergenic | 45.0% | |
CTATGGCAAAGGAAGAATGC+CGG | - | Chr4:69308898-69308917 | MsG0480022176.01.T01:intron | 45.0% | |
CTTTGCCATAGTACGTGACA+CGG | + | Chr4:69308889-69308908 | None:intergenic | 45.0% | |
GAGGGATTGTAACGTGACTA+TGG | - | Chr4:69307254-69307273 | MsG0480022176.01.T01:intron | 45.0% | |
GATCCATCCGAACCAACTTT+GGG | + | Chr4:69307374-69307393 | None:intergenic | 45.0% | |
GCTGATGAGTTAGCAAACCT+TGG | - | Chr4:69308046-69308065 | MsG0480022176.01.T01:intron | 45.0% | |
GGCTGAGTTTGTCAAGTTAC+AGG | - | Chr4:69309157-69309176 | MsG0480022176.01.T01:CDS | 45.0% | |
GGGGTCAACTCTATTCACAA+AGG | - | Chr4:69308641-69308660 | MsG0480022176.01.T01:intron | 45.0% | |
GGTGCATAATTCAAGGTCAC+AGG | + | Chr4:69306629-69306648 | None:intergenic | 45.0% | |
TCAACGAGTCAATTTGGCCA+GGG | + | Chr4:69307139-69307158 | None:intergenic | 45.0% | |
TGATCCATCCGAACCAACTT+TGG | + | Chr4:69307375-69307394 | None:intergenic | 45.0% | |
TGTATTGGATGTCACGATGC+AGG | - | Chr4:69308496-69308515 | MsG0480022176.01.T01:intron | 45.0% | |
TGTGGCTTCGTTTGTATCCT+TGG | - | Chr4:69307695-69307714 | MsG0480022176.01.T01:intron | 45.0% | |
TTCAACGAGTCAATTTGGCC+AGG | + | Chr4:69307140-69307159 | None:intergenic | 45.0% | |
! | TATAGTTCTACGCAGGGGTT+TGG | - | Chr4:69309065-69309084 | MsG0480022176.01.T01:intron | 45.0% |
! | TTTACACAGCCAGCTTGCTT+TGG | - | Chr4:69307499-69307518 | MsG0480022176.01.T01:intron | 45.0% |
!! | GAGCCTTAAAGTCTTGTTCG+TGG | - | Chr4:69307740-69307759 | MsG0480022176.01.T01:intron | 45.0% |
!! | TGGCATTGGCCAATGGTATT+TGG | - | Chr4:69307396-69307415 | MsG0480022176.01.T01:intron | 45.0% |
AGCTTGTAGAGGCCTTACCA+AGG | - | Chr4:69307652-69307671 | MsG0480022176.01.T01:intron | 50.0% | |
AGGCCTTACCAAGGATTCTG+AGG | - | Chr4:69307661-69307680 | MsG0480022176.01.T01:intron | 50.0% | |
ATTGGATGTCACGATGCAGG+TGG | - | Chr4:69308499-69308518 | MsG0480022176.01.T01:intron | 50.0% | |
CAACGAGTCAATTTGGCCAG+GGG | + | Chr4:69307138-69307157 | None:intergenic | 50.0% | |
CCAAAGGGGATGATGCTTAC+TGG | + | Chr4:69308538-69308557 | None:intergenic | 50.0% | |
CCAGTAAGCATCATCCCCTT+TGG | - | Chr4:69308535-69308554 | MsG0480022176.01.T01:intron | 50.0% | |
CGTGTCACGTACTATGGCAA+AGG | - | Chr4:69308887-69308906 | MsG0480022176.01.T01:intron | 50.0% | |
GAATAGAGTTGACCCCTGCA+AGG | + | Chr4:69308637-69308656 | None:intergenic | 50.0% | |
GACCCTCAGAATCCTTGGTA+AGG | + | Chr4:69307667-69307686 | None:intergenic | 50.0% | |
GGCCTTACCAAGGATTCTGA+GGG | - | Chr4:69307662-69307681 | MsG0480022176.01.T01:intron | 50.0% | |
TCTCATTGTGCTGCACAGAC+TGG | + | Chr4:69307053-69307072 | None:intergenic | 50.0% | |
TTCGGATGGATCAGTGGCAT+TGG | - | Chr4:69307382-69307401 | MsG0480022176.01.T01:intron | 50.0% | |
TTTGGCCAGGGGAAAGTTTG+GGG | + | Chr4:69307127-69307146 | None:intergenic | 50.0% | |
! | GTAAAGAGTGCATGCCACGA+GGG | - | Chr4:69309087-69309106 | MsG0480022176.01.T01:intron | 50.0% |
! | GTTGATGGACCAAAGCAAGC+TGG | + | Chr4:69307511-69307530 | None:intergenic | 50.0% |
!! | ACTCCCAAAGTTGGTTCGGA+TGG | - | Chr4:69307368-69307387 | MsG0480022176.01.T01:intron | 50.0% |
!! | AGTTGGTTCGGATGGATCAG+TGG | - | Chr4:69307376-69307395 | MsG0480022176.01.T01:intron | 50.0% |
!! | CGGATTAGTCAGTCCTTAGC+CGG | - | Chr4:69306753-69306772 | MsG0480022176.01.T01:intron | 50.0% |
!! | GTGCACATTTGGTGCTCGTT+TGG | - | Chr4:69309112-69309131 | MsG0480022176.01.T01:intron | 50.0% |
AATCCCACCGTCCACTTGTG+GGG | + | Chr4:69306725-69306744 | None:intergenic | 55.0% | |
ATTGAATGGGCCCCCACAAG+TGG | - | Chr4:69306711-69306730 | MsG0480022176.01.T01:CDS | 55.0% | |
CAACCTGGAGTGGCGCAAAT+TGG | + | Chr4:69306456-69306475 | None:intergenic | 55.0% | |
CAACTTGGCTCCTCCTCTTG+CGG | - | Chr4:69306410-69306429 | MsG0480022176.01.T01:CDS | 55.0% | |
CAATCCCACCGTCCACTTGT+GGG | + | Chr4:69306726-69306745 | None:intergenic | 55.0% | |
CAATTTGCGCCACTCCAGGT+TGG | - | Chr4:69306454-69306473 | MsG0480022176.01.T01:CDS | 55.0% | |
GTAAGCCCCAAACTTTCCCC+TGG | - | Chr4:69307119-69307138 | MsG0480022176.01.T01:CDS | 55.0% | |
TCTCCAATTTGCGCCACTCC+AGG | - | Chr4:69306450-69306469 | MsG0480022176.01.T01:CDS | 55.0% | |
! | GGTAAAGAGTGCATGCCACG+AGG | - | Chr4:69309086-69309105 | MsG0480022176.01.T01:intron | 55.0% |
!! | GGATCAGTGGCATTGGCCAA+TGG | - | Chr4:69307389-69307408 | MsG0480022176.01.T01:intron | 55.0% |
AATGGGCCCCCACAAGTGGA+CGG | - | Chr4:69306715-69306734 | MsG0480022176.01.T01:CDS | 60.0% | |
AGAAAGGCAGCCGCAAGAGG+AGG | + | Chr4:69306423-69306442 | None:intergenic | 60.0% | |
AGCAGAAAGGCAGCCGCAAG+AGG | + | Chr4:69306426-69306445 | None:intergenic | 60.0% | |
ATCCCACCGTCCACTTGTGG+GGG | + | Chr4:69306724-69306743 | None:intergenic | 60.0% | |
CCAAATGTGCACTGCCCTCG+TGG | + | Chr4:69309104-69309123 | None:intergenic | 60.0% | |
CCAATCCCACCGTCCACTTG+TGG | + | Chr4:69306727-69306746 | None:intergenic | 60.0% | |
CCACAAGTGGACGGTGGGAT+TGG | - | Chr4:69306724-69306743 | MsG0480022176.01.T01:intron | 60.0% | |
CCACGAGGGCAGTGCACATT+TGG | - | Chr4:69309101-69309120 | MsG0480022176.01.T01:intron | 60.0% | |
GACGGTGGGATTGGACCCTT+CGG | - | Chr4:69306733-69306752 | MsG0480022176.01.T01:intron | 60.0% | |
GGCCCCCACAAGTGGACGGT+GGG | - | Chr4:69306719-69306738 | MsG0480022176.01.T01:CDS | 70.0% | |
GGGCCCCCACAAGTGGACGG+TGG | - | Chr4:69306718-69306737 | MsG0480022176.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 69306153 | 69309443 | 69306153 | ID=MsG0480022176.01;Name=MsG0480022176.01 |
Chr4 | mRNA | 69306153 | 69309443 | 69306153 | ID=MsG0480022176.01.T01;Parent=MsG0480022176.01;Name=MsG0480022176.01.T01;_AED=0.49;_eAED=0.49;_QI=31|1|1|1|0.4|0.5|6|223|173 |
Chr4 | exon | 69306153 | 69306516 | 69306153 | ID=MsG0480022176.01.T01:exon:55531;Parent=MsG0480022176.01.T01 |
Chr4 | exon | 69306677 | 69306740 | 69306677 | ID=MsG0480022176.01.T01:exon:55530;Parent=MsG0480022176.01.T01 |
Chr4 | exon | 69306923 | 69306954 | 69306923 | ID=MsG0480022176.01.T01:exon:55529;Parent=MsG0480022176.01.T01 |
Chr4 | exon | 69307059 | 69307156 | 69307059 | ID=MsG0480022176.01.T01:exon:55528;Parent=MsG0480022176.01.T01 |
Chr4 | exon | 69309125 | 69309260 | 69309125 | ID=MsG0480022176.01.T01:exon:55527;Parent=MsG0480022176.01.T01 |
Chr4 | exon | 69309362 | 69309443 | 69309362 | ID=MsG0480022176.01.T01:exon:55526;Parent=MsG0480022176.01.T01 |
Chr4 | five_prime_UTR | 69309413 | 69309443 | 69309413 | ID=MsG0480022176.01.T01:five_prime_utr;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69309362 | 69309412 | 69309362 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69309125 | 69309260 | 69309125 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69307059 | 69307156 | 69307059 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69306923 | 69306954 | 69306923 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69306677 | 69306740 | 69306677 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | CDS | 69306376 | 69306516 | 69306376 | ID=MsG0480022176.01.T01:cds;Parent=MsG0480022176.01.T01 |
Chr4 | three_prime_UTR | 69306153 | 69306375 | 69306153 | ID=MsG0480022176.01.T01:three_prime_utr;Parent=MsG0480022176.01.T01 |
Gene Sequence |
Protein sequence |