AlfalfaGEDB | Msa0168720

M. sativa cultivar zhongmu-4 / Msa0168720

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168720	XP_004495182.1	82.424	165	22	1	1	158	1	165	2.72e-87	262

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168720	A0A1S2XVH9	82.424	165	22	1	1	158	1	165	1.30e-87	262

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004860	Msa0168720	0.806861	6.698446e-50	-8.615850e-47
Msa0004920	Msa0168720	0.800298	1.538673e-48	-8.615850e-47
Msa0009430	Msa0168720	0.806264	8.951464e-50	-8.615850e-47
Msa0010820	Msa0168720	0.802936	4.428871e-49	-8.615850e-47
Msa0028660	Msa0168720	0.821257	4.445057e-53	-8.615850e-47
Msa0057140	Msa0168720	0.802929	4.442161e-49	-8.615850e-47
Msa0073480	Msa0168720	0.801731	7.839640e-49	-8.615850e-47
Msa0076320	Msa0168720	0.800466	1.422560e-48	-8.615850e-47
Msa0084940	Msa0168720	0.826411	2.753531e-54	-8.615850e-47
Msa0149000	Msa0168720	0.804397	2.203519e-49	-8.615850e-47
Msa0168720	Msa0184780	0.811590	6.487338e-51	-8.615850e-47
Msa0168720	Msa0191050	0.819507	1.120326e-52	-8.615850e-47
Msa0168720	Msa0233350	0.816427	5.561042e-52	-8.615850e-47
Msa0168720	Msa0267310	0.824404	8.219542e-54	-8.615850e-47
Msa0168720	Msa0267970	0.803375	3.592089e-49	-8.615850e-47
Msa0168720	Msa0273900	0.812819	3.499735e-51	-8.615850e-47
Msa0168720	Msa0282250	0.805937	1.048789e-49	-8.615850e-47
Msa0168720	Msa0309770	0.839785	1.286933e-57	-8.615850e-47
Msa0168720	Msa0314720	0.810591	1.068350e-50	-8.615850e-47
Msa0168720	Msa0366890	0.820218	7.703077e-53	-8.615850e-47
Msa0168720	Msa0372670	0.804834	1.786031e-49	-8.615850e-47
Msa0168720	Msa0376300	0.804592	2.006375e-49	-8.615850e-47
Msa0168720	Msa0385580	0.819437	1.162176e-52	-8.615850e-47
Msa0168720	Msa0397540	0.803218	3.872088e-49	-8.615850e-47
Msa0168720	Msa0399340	0.813298	2.748011e-51	-8.615850e-47
Msa0168720	Msa0425220	0.800585	1.344885e-48	-8.615850e-47
Msa0168720	Msa0433360	0.803803	2.927689e-49	-8.615850e-47
Msa0168720	Msa0442200	0.821672	3.565715e-53	-8.615850e-47
Msa0168720	Msa0477080	0.847124	1.409814e-59	-8.615850e-47
Msa0168720	Msa0503200	0.815446	9.206735e-52	-8.615850e-47
Msa0168720	Msa0555200	0.808227	3.435687e-50	-8.615850e-47
Msa0168720	Msa0557070	0.808701	2.720751e-50	-8.615850e-47
Msa0168720	Msa0577500	0.803166	3.968082e-49	-8.615850e-47
Msa0168720	Msa0601290	0.808417	3.129421e-50	-8.615850e-47
Msa0168720	Msa0607050	0.822486	2.309306e-53	-8.615850e-47
Msa0168720	Msa0608710	0.824225	9.060151e-54	-8.615850e-47
Msa0168720	Msa0610430	0.824714	6.950976e-54	-8.615850e-47
Msa0168720	Msa0643180	0.837913	3.926757e-57	-8.615850e-47
Msa0168720	Msa0647500	0.836411	9.508284e-57	-8.615850e-47
Msa0168720	Msa0649490	0.811504	6.771887e-51	-8.615850e-47
Msa0168720	Msa0673460	0.812035	5.190854e-51	-8.615850e-47
Msa0168720	Msa0682840	0.822539	2.243713e-53	-8.615850e-47
Msa0168720	Msa0690150	0.825257	5.174329e-54	-8.615850e-47
Msa0168720	Msa0692830	0.808767	2.634611e-50	-8.615850e-47
Msa0168720	Msa0692950	0.810112	1.355126e-50	-8.615850e-47
Msa0168720	Msa0697940	0.801121	1.045646e-48	-8.615850e-47
Msa0168720	Msa0711780	0.804643	1.957210e-49	-8.615850e-47
Msa0168720	Msa0711890	0.818662	1.743473e-52	-8.615850e-47
Msa0168720	Msa0783790	0.810850	9.389491e-51	-8.615850e-47
Msa0168720	Msa0794670	0.824379	8.333112e-54	-8.615850e-47
Msa0168720	Msa0795920	0.800841	1.192809e-48	-8.615850e-47
Msa0168720	Msa0796530	0.803560	3.287983e-49	-8.615850e-47
Msa0168720	Msa0798440	0.804526	2.070320e-49	-8.615850e-47
Msa0168720	Msa0808270	0.814850	1.248882e-51	-8.615850e-47
Msa0168720	Msa0830540	0.806608	7.572922e-50	-8.615850e-47
Msa0168720	Msa0866550	0.801087	1.062456e-48	-8.615850e-47
Msa0168720	Msa0869120	0.824508	7.769473e-54	-8.615850e-47
Msa0168720	Msa0876200	0.802509	5.423583e-49	-8.615850e-47
Msa0168720	Msa0933310	0.806180	9.322708e-50	-8.615850e-47
Msa0168720	Msa0942070	0.823058	1.698672e-53	-8.615850e-47
Msa0168720	Msa0968590	0.800106	1.684176e-48	-8.615850e-47
Msa0168720	Msa0970030	0.833523	5.078370e-56	-8.615850e-47
Msa0168720	Msa0971090	0.803429	3.500466e-49	-8.615850e-47
Msa0168720	Msa1014420	0.804788	1.825666e-49	-8.615850e-47
Msa0168720	Msa1017630	0.822735	2.020681e-53	-8.615850e-47
Msa0168720	Msa1021540	0.810611	1.057655e-50	-8.615850e-47
Msa0168720	Msa1046020	0.811055	8.475094e-51	-8.615850e-47
Msa0168720	Msa1055410	0.802801	4.721287e-49	-8.615850e-47
Msa0168720	Msa1082500	0.804897	1.732319e-49	-8.615850e-47
Msa0168720	Msa1170410	0.807254	5.528672e-50	-8.615850e-47
Msa0168720	Msa1187840	0.803442	3.478662e-49	-8.615850e-47
Msa0168720	Msa1201560	0.817966	2.507239e-52	-8.615850e-47
Msa0168720	Msa1211890	0.803941	2.741594e-49	-8.615850e-47
Msa0168720	Msa1217470	0.814472	1.513848e-51	-8.615850e-47
Msa0168720	Msa1255040	-0.805662	1.197768e-49	-8.615850e-47
Msa0168720	Msa1294120	0.808964	2.390571e-50	-8.615850e-47
Msa0168720	Msa1356440	0.834039	3.774581e-56	-8.615850e-47
Msa0168720	Msa1375560	0.807143	5.838618e-50	-8.615850e-47
Msa0168720	Msa1386780	0.820066	8.347650e-53	-8.615850e-47
Msa0168720	Msa1391410	0.814886	1.226294e-51	-8.615850e-47
Msa0168720	Msa1394290	0.804159	2.469206e-49	-8.615850e-47
Msa0168720	Msa1403680	0.806297	8.808907e-50	-8.615850e-47
Msa0168720	Msa1426030	0.818342	2.061283e-52	-8.615850e-47
Msa0168720	Msa1435370	0.802587	5.227102e-49	-8.615850e-47
Msa0168720	Msa1444740	0.806329	8.674324e-50	-8.615850e-47
Msa0168720	Msa1449820	0.813412	2.593564e-51	-8.615850e-47
Msa0168720	Msa1454480	0.807504	4.893258e-50	-8.615850e-47
Msa0168720	Msa1457920	0.809571	1.771905e-50	-8.615850e-47
Msa0168720	Msa1461280	0.829218	5.820586e-55	-8.615850e-47
Msa0168720	Msa1466300	0.818298	2.108577e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168720	MtrunA17_Chr1g0185271	92.727	165	5	1	1	158	1	165	7.98e-88	253

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0168720	AT4G04614.1	59.167	120	44	3	40	158	61	176	2.93e-41	136
Msa0168720	AT4G04614.2	59.167	120	44	3	40	158	61	176	2.93e-41	136

Find 51 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCTTTGTGTCATCTTCTT+TGG	0.118453	1_4:+51582224	None:intergenic
GTCTGTCTCTGCTTCTTTCT+AGG	0.170078	1_4:-51583823	Msa0168720:intron
CTCTGTTCTTCTTTGTTGAT+TGG	0.201550	1_4:+51583851	None:intergenic
ATTCTGATTCTGATTCAAAA+AGG	0.206620	1_4:+51581779	None:intergenic
TTCTTTGTGTCATCTTCTTT+GGG	0.233840	1_4:+51582225	None:intergenic
GATTCCTGATTGTTGCTTGC+TGG	0.236203	1_4:+51583880	None:intergenic
AAGTCATTTACAATCTAAAA+TGG	0.237192	1_4:+51581811	None:intergenic
AGGGACAATGGAGTTTATTC+TGG	0.281268	1_4:-51581970	Msa0168720:CDS
CTGAAGCGATACGGCTATAA+AGG	0.293708	1_4:-51582276	Msa0168720:CDS
CAATCACAAACCCTAATTAC+TGG	0.327652	1_4:+51583910	None:intergenic
ATTCCTGATTGTTGCTTGCT+GGG	0.339631	1_4:+51583881	None:intergenic
AGGCGGGCCTTCTGTCTTAA+AGG	0.350155	1_4:-51582256	Msa0168720:CDS
TCTGAAAATGATAGTGAAAC+TGG	0.358513	1_4:-51583380	Msa0168720:CDS
CTCAGAAGGAAAAGAAGAAA+AGG	0.400791	1_4:-51582050	Msa0168720:CDS
GGGATCTTGGTCAAGCAAGC+AGG	0.419342	1_4:-51582029	Msa0168720:CDS
GAAAAGAAGAAAAGGGATCT+TGG	0.429119	1_4:-51582042	Msa0168720:CDS
TTCTGGTTTCGATTCTTGAT+AGG	0.432577	1_4:-51581953	Msa0168720:exon
TTCAGAGCTTCAAAGTCAAT+TGG	0.442566	1_4:+51582294	None:intergenic
AAGATGACACAAAGAAAGAT+TGG	0.453949	1_4:-51582218	Msa0168720:CDS
GTGTCATCTTCTTTGGGTGG+AGG	0.460313	1_4:+51582231	None:intergenic
GGACCCAGCAAGCAACAATC+AGG	0.472443	1_4:-51583884	Msa0168720:five_prime_UTR
CAGTTGGCATTTGCTCTCCT+AGG	0.493250	1_4:+51582109	None:intergenic
ATTATGTTGAAGAAGAGAAA+AGG	0.499802	1_4:-51581999	Msa0168720:CDS
ATTCCATTGCGATTCCTCAA+TGG	0.505348	1_4:+51583943	None:intergenic
GGATCTTGGTCAAGCAAGCA+GGG	0.515240	1_4:-51582028	Msa0168720:CDS
TTTGTGTCATCTTCTTTGGG+TGG	0.516808	1_4:+51582228	None:intergenic
TCAGAAGGAAAAGAAGAAAA+GGG	0.533332	1_4:-51582049	Msa0168720:CDS
AGAAGAGAAAAGGCTGTTGA+GGG	0.535745	1_4:-51581989	Msa0168720:CDS
TCATTCCTAGTCAGAACAGT+TGG	0.556209	1_4:+51582093	None:intergenic
ACACAAAGAAAGATTGGTCC+TGG	0.556354	1_4:-51582212	Msa0168720:CDS
ACAAGAGAGGCTCTTTCCCT+AGG	0.557271	1_4:-51582126	Msa0168720:CDS
AAATGTAGTAGATTCTAGCC+TGG	0.557710	1_4:+51581930	None:intergenic
GTTTCGATTCTTGATAGGCC+AGG	0.558267	1_4:-51581948	Msa0168720:exon
AAAAGGCTGTTGAGGGACAA+TGG	0.563867	1_4:-51581982	Msa0168720:CDS
TTTGAAGCTCTGAAGCGATA+CGG	0.565621	1_4:-51582285	Msa0168720:CDS
TTGGTCCTGGTCCAGTGGAA+AGG	0.567873	1_4:-51582199	Msa0168720:CDS
AGTTGGCATTTGCTCTCCTA+GGG	0.578927	1_4:+51582110	None:intergenic
AAGAAGAGAAAAGGCTGTTG+AGG	0.580825	1_4:-51581990	Msa0168720:CDS
GGAGGTACCTTTAAGACAGA+AGG	0.585907	1_4:+51582249	None:intergenic
AGCGATACGGCTATAAAGGC+GGG	0.593507	1_4:-51582272	Msa0168720:CDS
AAAGATTGGTCCTGGTCCAG+TGG	0.594354	1_4:-51582204	Msa0168720:CDS
AAATGCCAACTGTTCTGACT+AGG	0.603014	1_4:-51582098	Msa0168720:CDS
AATTAGGGTTTGTGATTGCG+AGG	0.603978	1_4:-51583905	Msa0168720:five_prime_UTR
CTATGAAGAGGACAATGCCA+TGG	0.617111	1_4:-51583433	Msa0168720:CDS
ATATAATATATACTATGAAG+AGG	0.621276	1_4:-51583445	Msa0168720:exon
AAACCATTGAGGAATCGCAA+TGG	0.625096	1_4:-51583946	Msa0168720:five_prime_UTR
ATCTTGGTCAAGCAAGCAGG+GGG	0.627378	1_4:-51582026	Msa0168720:CDS
GATCTTGGTCAAGCAAGCAG+GGG	0.638659	1_4:-51582027	Msa0168720:CDS
AGAGAGAAAGAAAACAAGAG+AGG	0.657420	1_4:-51582139	Msa0168720:CDS
AAGCGATACGGCTATAAAGG+CGG	0.666205	1_4:-51582273	Msa0168720:CDS
AAAGAAGCAGAGACAGACAG+AGG	0.721901	1_4:+51583828	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAGATTTAATCAATTATT+AGG	+	chr1_4:51582119-51582138	None:intergenic	10.0%
!!	AAATAAATAAAGTACAAAAA+TGG	+	chr1_4:51582172-51582191	None:intergenic	10.0%
!!!	TATTTATTAATCATTTTTTG+AGG	-	chr1_4:51582191-51582210	Msa0168720:CDS	10.0%
!!	AATAGATTTAATCAATTATT+AGG	+	chr1_4:51582119-51582138	None:intergenic	10.0%
!!	AAATAAATAAAGTACAAAAA+TGG	+	chr1_4:51582172-51582191	None:intergenic	10.0%
!!!	TATTTATTAATCATTTTTTG+AGG	-	chr1_4:51582191-51582210	Msa0168720:CDS	10.0%
!!!	AACAGTTTTCAAAATTTTAT+GGG	-	chr1_4:51582063-51582082	Msa0168720:CDS	15.0%
!!	ATATAATATATACTATGAAG+AGG	-	chr1_4:51582277-51582296	Msa0168720:CDS	15.0%
!!	ATTTAATTCAACATAGTTAT+AGG	+	chr1_4:51582404-51582423	None:intergenic	15.0%
!!	TGTTGAATTAAATGTTTAAA+TGG	-	chr1_4:51582411-51582430	Msa0168720:intron	15.0%
!!	CAATAATATATTGTTAATAG+AGG	+	chr1_4:51583202-51583221	None:intergenic	15.0%
!!!	AACAGTTTTCAAAATTTTAT+GGG	-	chr1_4:51582063-51582082	Msa0168720:CDS	15.0%
!!	ATATAATATATACTATGAAG+AGG	-	chr1_4:51582277-51582296	Msa0168720:CDS	15.0%
!!	ATTTAATTCAACATAGTTAT+AGG	+	chr1_4:51582404-51582423	None:intergenic	15.0%
!!	TGTTGAATTAAATGTTTAAA+TGG	-	chr1_4:51582411-51582430	Msa0168720:intron	15.0%
!!	CAATAATATATTGTTAATAG+AGG	+	chr1_4:51583202-51583221	None:intergenic	15.0%
!!!	TTATGCTTTTTTGTTTGTTT+TGG	-	chr1_4:51581955-51581974	Msa0168720:exon	20.0%
!!!	GAACAGTTTTCAAAATTTTA+TGG	-	chr1_4:51582062-51582081	Msa0168720:CDS	20.0%
!!!	TAATCATTTTTTGAGGTTTA+AGG	-	chr1_4:51582198-51582217	Msa0168720:CDS	20.0%
!!	TTGTTTATGTGTTAATTAAC+AGG	-	chr1_4:51582243-51582262	Msa0168720:CDS	20.0%
!!	TGTTTATGTGTTAATTAACA+GGG	-	chr1_4:51582244-51582263	Msa0168720:CDS	20.0%
!!	AAATGTATTTACTTGAATCT+AGG	-	chr1_4:51582650-51582669	Msa0168720:intron	20.0%
!!	AATGATAGCTGATAATATTA+TGG	-	chr1_4:51582860-51582879	Msa0168720:intron	20.0%
!!	TATTCTAATTTACATTTCCT+GGG	+	chr1_4:51583165-51583184	None:intergenic	20.0%
!!	ATATTCTAATTTACATTTCC+TGG	+	chr1_4:51583166-51583185	None:intergenic	20.0%
!!	GGAAATGTAAATTAGAATAT+CGG	-	chr1_4:51583166-51583185	Msa0168720:intron	20.0%
!!	GAAATGTAAATTAGAATATC+GGG	-	chr1_4:51583167-51583186	Msa0168720:intron	20.0%
!!	AAATGTAAATTAGAATATCG+GGG	-	chr1_4:51583168-51583187	Msa0168720:intron	20.0%
!!!	ATCTACTACATTTTGTATAA+AGG	-	chr1_4:51583802-51583821	Msa0168720:intron	20.0%
!!	AAGTCATTTACAATCTAAAA+TGG	+	chr1_4:51583914-51583933	None:intergenic	20.0%
!!!	ATTTTAGATTGTAAATGACT+TGG	-	chr1_4:51583913-51583932	Msa0168720:five_prime_UTR	20.0%
!!	ATAAAAATTAGAATGTTGTC+CGG	-	chr1_4:51583964-51583983	Msa0168720:five_prime_UTR	20.0%
!!!	TTATGCTTTTTTGTTTGTTT+TGG	-	chr1_4:51581955-51581974	Msa0168720:exon	20.0%
!!!	GAACAGTTTTCAAAATTTTA+TGG	-	chr1_4:51582062-51582081	Msa0168720:CDS	20.0%
!!!	TAATCATTTTTTGAGGTTTA+AGG	-	chr1_4:51582198-51582217	Msa0168720:CDS	20.0%
!!	TTGTTTATGTGTTAATTAAC+AGG	-	chr1_4:51582243-51582262	Msa0168720:CDS	20.0%
!!	TGTTTATGTGTTAATTAACA+GGG	-	chr1_4:51582244-51582263	Msa0168720:CDS	20.0%
!!	AAATGTATTTACTTGAATCT+AGG	-	chr1_4:51582650-51582669	Msa0168720:intron	20.0%
!!	AATGATAGCTGATAATATTA+TGG	-	chr1_4:51582860-51582879	Msa0168720:intron	20.0%
!!	TATTCTAATTTACATTTCCT+GGG	+	chr1_4:51583165-51583184	None:intergenic	20.0%
!!	ATATTCTAATTTACATTTCC+TGG	+	chr1_4:51583166-51583185	None:intergenic	20.0%
!!	GGAAATGTAAATTAGAATAT+CGG	-	chr1_4:51583166-51583185	Msa0168720:intron	20.0%
!!	GAAATGTAAATTAGAATATC+GGG	-	chr1_4:51583167-51583186	Msa0168720:intron	20.0%
!!	AAATGTAAATTAGAATATCG+GGG	-	chr1_4:51583168-51583187	Msa0168720:intron	20.0%
!!!	ATCTACTACATTTTGTATAA+AGG	-	chr1_4:51583802-51583821	Msa0168720:intron	20.0%
!!	AAGTCATTTACAATCTAAAA+TGG	+	chr1_4:51583914-51583933	None:intergenic	20.0%
!!!	ATTTTAGATTGTAAATGACT+TGG	-	chr1_4:51583913-51583932	Msa0168720:five_prime_UTR	20.0%
!	TAAAGCTGAAAAACAAAACA+TGG	+	chr1_4:51581938-51581957	None:intergenic	25.0%
!!	AACAGACATGAATGAATTTT+GGG	+	chr1_4:51581991-51582010	None:intergenic	25.0%
!!	AAACAGACATGAATGAATTT+TGG	+	chr1_4:51581992-51582011	None:intergenic	25.0%
!!!	CAAAATACCTTTGGATTTTT+TGG	+	chr1_4:51582370-51582389	None:intergenic	25.0%
!!!	CAAAAAATCCAAAGGTATTT+TGG	-	chr1_4:51582368-51582387	Msa0168720:intron	25.0%
!	TGATAGGTGAAAATAGTATT+TGG	-	chr1_4:51582625-51582644	Msa0168720:intron	25.0%
!	GATAGGTGAAAATAGTATTT+GGG	-	chr1_4:51582626-51582645	Msa0168720:intron	25.0%
!	AAAACGCAAACATTAATTGT+GGG	+	chr1_4:51582705-51582724	None:intergenic	25.0%
!!	ACAATTAATGTTTGCGTTTT+GGG	-	chr1_4:51582705-51582724	Msa0168720:intron	25.0%
!!!	ACTGTTTTAGATTTTGTTGT+TGG	-	chr1_4:51582962-51582981	Msa0168720:intron	25.0%
!!!	CTGTTTTAGATTTTGTTGTT+GGG	-	chr1_4:51582963-51582982	Msa0168720:intron	25.0%
!!!	TGTTTTAGATTTTGTTGTTG+GGG	-	chr1_4:51582964-51582983	Msa0168720:intron	25.0%
!!!	TTCTGAAATCTGTATTATGA+TGG	-	chr1_4:51583282-51583301	Msa0168720:intron	25.0%
!	ATTATGTTGAAGAAGAGAAA+AGG	-	chr1_4:51583723-51583742	Msa0168720:intron	25.0%
!!!	TCATGTCATTTTGTTATACA+AGG	-	chr1_4:51583840-51583859	Msa0168720:five_prime_UTR	25.0%
!!!	CATTTTGTTATACAAGGATT+TGG	-	chr1_4:51583846-51583865	Msa0168720:five_prime_UTR	25.0%
!	TTCTGATTCTGATTCAAAAA+GGG	+	chr1_4:51583945-51583964	None:intergenic	25.0%
!	ATTCTGATTCTGATTCAAAA+AGG	+	chr1_4:51583946-51583965	None:intergenic	25.0%
!	TAAAAATTAGAATGTTGTCC+GGG	-	chr1_4:51583965-51583984	Msa0168720:five_prime_UTR	25.0%
!	TAAAGCTGAAAAACAAAACA+TGG	+	chr1_4:51581938-51581957	None:intergenic	25.0%
!!	AACAGACATGAATGAATTTT+GGG	+	chr1_4:51581991-51582010	None:intergenic	25.0%
!!	AAACAGACATGAATGAATTT+TGG	+	chr1_4:51581992-51582011	None:intergenic	25.0%
!!!	CAAAATACCTTTGGATTTTT+TGG	+	chr1_4:51582370-51582389	None:intergenic	25.0%
!!!	CAAAAAATCCAAAGGTATTT+TGG	-	chr1_4:51582368-51582387	Msa0168720:intron	25.0%
!	TGATAGGTGAAAATAGTATT+TGG	-	chr1_4:51582625-51582644	Msa0168720:intron	25.0%
!	GATAGGTGAAAATAGTATTT+GGG	-	chr1_4:51582626-51582645	Msa0168720:intron	25.0%
!	AAAACGCAAACATTAATTGT+GGG	+	chr1_4:51582705-51582724	None:intergenic	25.0%
!!	ACAATTAATGTTTGCGTTTT+GGG	-	chr1_4:51582705-51582724	Msa0168720:intron	25.0%
!!!	ACTGTTTTAGATTTTGTTGT+TGG	-	chr1_4:51582962-51582981	Msa0168720:intron	25.0%
!!!	CTGTTTTAGATTTTGTTGTT+GGG	-	chr1_4:51582963-51582982	Msa0168720:intron	25.0%
!!!	TGTTTTAGATTTTGTTGTTG+GGG	-	chr1_4:51582964-51582983	Msa0168720:intron	25.0%
!!!	TTCTGAAATCTGTATTATGA+TGG	-	chr1_4:51583282-51583301	Msa0168720:intron	25.0%
!	ATTATGTTGAAGAAGAGAAA+AGG	-	chr1_4:51583723-51583742	Msa0168720:intron	25.0%
!!!	TCATGTCATTTTGTTATACA+AGG	-	chr1_4:51583840-51583859	Msa0168720:five_prime_UTR	25.0%
!!!	CATTTTGTTATACAAGGATT+TGG	-	chr1_4:51583846-51583865	Msa0168720:five_prime_UTR	25.0%
!	TTCTGATTCTGATTCAAAAA+GGG	+	chr1_4:51583945-51583964	None:intergenic	25.0%
!	ATTCTGATTCTGATTCAAAA+AGG	+	chr1_4:51583946-51583965	None:intergenic	25.0%
	GTAACTAACAAAAACCATTG+AGG	-	chr1_4:51581765-51581784	Msa0168720:three_prime_UTR	30.0%
	TACCCTAAAAACCAGTAATT+AGG	-	chr1_4:51581801-51581820	Msa0168720:three_prime_UTR	30.0%
	ACCCTAAAAACCAGTAATTA+GGG	-	chr1_4:51581802-51581821	Msa0168720:three_prime_UTR	30.0%
!!!	ACCCTAATTACTGGTTTTTA+GGG	+	chr1_4:51581806-51581825	None:intergenic	30.0%
!!!	AACCCTAATTACTGGTTTTT+AGG	+	chr1_4:51581807-51581826	None:intergenic	30.0%
!	ACAGACATGAATGAATTTTG+GGG	+	chr1_4:51581990-51582009	None:intergenic	30.0%
	TCAATTATTAGGAAGTGATG+AGG	+	chr1_4:51582108-51582127	None:intergenic	30.0%
!	TCTGAAAATGATAGTGAAAC+TGG	-	chr1_4:51582342-51582361	Msa0168720:intron	30.0%
!	GATTTTTGTAACACTAGCAA+CGG	-	chr1_4:51582475-51582494	Msa0168720:intron	30.0%
	TAATTGAATCTAATCGTGTG+TGG	-	chr1_4:51582545-51582564	Msa0168720:intron	30.0%
!	ATTTACTTGAATCTAGGATG+TGG	-	chr1_4:51582656-51582675	Msa0168720:intron	30.0%
	CAAAACGCAAACATTAATTG+TGG	+	chr1_4:51582706-51582725	None:intergenic	30.0%
!	CACAATTAATGTTTGCGTTT+TGG	-	chr1_4:51582704-51582723	Msa0168720:intron	30.0%
!!	CATTTTGTTGTAGCTGATAT+AGG	-	chr1_4:51582813-51582832	Msa0168720:intron	30.0%
!!!	TCCTTGTTTTTCCTTGTTAT+TGG	-	chr1_4:51582927-51582946	Msa0168720:intron	30.0%
	ACCAATAACAAGGAAAAACA+AGG	+	chr1_4:51582931-51582950	None:intergenic	30.0%
	ATCACAATACACCAATAACA+AGG	+	chr1_4:51582941-51582960	None:intergenic	30.0%
	TTCTTTGTGTCATCTTCTTT+GGG	+	chr1_4:51583500-51583519	None:intergenic	30.0%
	TTTCTTTGTGTCATCTTCTT+TGG	+	chr1_4:51583501-51583520	None:intergenic	30.0%
	AAGATGACACAAAGAAAGAT+TGG	-	chr1_4:51583504-51583523	Msa0168720:intron	30.0%
	TCAGAAGGAAAAGAAGAAAA+GGG	-	chr1_4:51583673-51583692	Msa0168720:intron	30.0%
	TCTGATTCTGATTCAAAAAG+GGG	+	chr1_4:51583944-51583963	None:intergenic	30.0%
	GTAACTAACAAAAACCATTG+AGG	-	chr1_4:51581765-51581784	Msa0168720:three_prime_UTR	30.0%
	TACCCTAAAAACCAGTAATT+AGG	-	chr1_4:51581801-51581820	Msa0168720:three_prime_UTR	30.0%
	ACCCTAAAAACCAGTAATTA+GGG	-	chr1_4:51581802-51581821	Msa0168720:three_prime_UTR	30.0%
!!!	ACCCTAATTACTGGTTTTTA+GGG	+	chr1_4:51581806-51581825	None:intergenic	30.0%
!!!	AACCCTAATTACTGGTTTTT+AGG	+	chr1_4:51581807-51581826	None:intergenic	30.0%
!	ACAGACATGAATGAATTTTG+GGG	+	chr1_4:51581990-51582009	None:intergenic	30.0%
	TCAATTATTAGGAAGTGATG+AGG	+	chr1_4:51582108-51582127	None:intergenic	30.0%
!	TCTGAAAATGATAGTGAAAC+TGG	-	chr1_4:51582342-51582361	Msa0168720:intron	30.0%
!	GATTTTTGTAACACTAGCAA+CGG	-	chr1_4:51582475-51582494	Msa0168720:intron	30.0%
	TAATTGAATCTAATCGTGTG+TGG	-	chr1_4:51582545-51582564	Msa0168720:intron	30.0%
!	ATTTACTTGAATCTAGGATG+TGG	-	chr1_4:51582656-51582675	Msa0168720:intron	30.0%
	CAAAACGCAAACATTAATTG+TGG	+	chr1_4:51582706-51582725	None:intergenic	30.0%
!	CACAATTAATGTTTGCGTTT+TGG	-	chr1_4:51582704-51582723	Msa0168720:intron	30.0%
!!	CATTTTGTTGTAGCTGATAT+AGG	-	chr1_4:51582813-51582832	Msa0168720:intron	30.0%
!!!	TCCTTGTTTTTCCTTGTTAT+TGG	-	chr1_4:51582927-51582946	Msa0168720:intron	30.0%
	ACCAATAACAAGGAAAAACA+AGG	+	chr1_4:51582931-51582950	None:intergenic	30.0%
	ATCACAATACACCAATAACA+AGG	+	chr1_4:51582941-51582960	None:intergenic	30.0%
	TTCTTTGTGTCATCTTCTTT+GGG	+	chr1_4:51583500-51583519	None:intergenic	30.0%
	TTTCTTTGTGTCATCTTCTT+TGG	+	chr1_4:51583501-51583520	None:intergenic	30.0%
	AAGATGACACAAAGAAAGAT+TGG	-	chr1_4:51583504-51583523	Msa0168720:intron	30.0%
	TCAGAAGGAAAAGAAGAAAA+GGG	-	chr1_4:51583673-51583692	Msa0168720:intron	30.0%
	TCTGATTCTGATTCAAAAAG+GGG	+	chr1_4:51583944-51583963	None:intergenic	30.0%
	CAATCACAAACCCTAATTAC+TGG	+	chr1_4:51581815-51581834	None:intergenic	35.0%
	CTCTGTTCTTCTTTGTTGAT+TGG	+	chr1_4:51581874-51581893	None:intergenic	35.0%
!!	TGAATGAATTTTGGGGGAAA+AGG	+	chr1_4:51581983-51582002	None:intergenic	35.0%
!	CAGACATGAATGAATTTTGG+GGG	+	chr1_4:51581989-51582008	None:intergenic	35.0%
	TGACACTTACACTTTGATGT+TGG	-	chr1_4:51582501-51582520	Msa0168720:intron	35.0%
	AACACTTCAGATTAAGAGTG+TGG	+	chr1_4:51582587-51582606	None:intergenic	35.0%
!	ACACTCTTAATCTGAAGTGT+TGG	-	chr1_4:51582586-51582605	Msa0168720:intron	35.0%
	AATATCTCATCGCTAGAATG+TGG	-	chr1_4:51582739-51582758	Msa0168720:intron	35.0%
	AAGGAATCTCTTCTACAATG+GGG	+	chr1_4:51582912-51582931	None:intergenic	35.0%
	CAAGGAATCTCTTCTACAAT+GGG	+	chr1_4:51582913-51582932	None:intergenic	35.0%
	ACAAGGAATCTCTTCTACAA+TGG	+	chr1_4:51582914-51582933	None:intergenic	35.0%
	AGATGGTTCATAAACAGTTG+TGG	-	chr1_4:51583025-51583044	Msa0168720:intron	35.0%
	CAAGAGTTTCTTGAGTTTCA+AGG	-	chr1_4:51583121-51583140	Msa0168720:intron	35.0%
	AACTAGAGTAGATATTTCCC+AGG	-	chr1_4:51583145-51583164	Msa0168720:intron	35.0%
	GCTAACTAAGTCACACAATA+TGG	+	chr1_4:51583236-51583255	None:intergenic	35.0%
	AGTAAACTAGTAGCTAAGCA+TGG	+	chr1_4:51583366-51583385	None:intergenic	35.0%
	TTTACTTACTTCATGTCTGC+AGG	-	chr1_4:51583380-51583399	Msa0168720:CDS	35.0%
	TTCAGAGCTTCAAAGTCAAT+TGG	+	chr1_4:51583431-51583450	None:intergenic	35.0%
	AGAGAGAAAGAAAACAAGAG+AGG	-	chr1_4:51583583-51583602	Msa0168720:intron	35.0%
!	GAATCTTTCCTTTTCTCAGA+AGG	-	chr1_4:51583658-51583677	Msa0168720:intron	35.0%
!!	CTTCTTTTCCTTCTGAGAAA+AGG	+	chr1_4:51583669-51583688	None:intergenic	35.0%
	CTCAGAAGGAAAAGAAGAAA+AGG	-	chr1_4:51583672-51583691	Msa0168720:intron	35.0%
	GAAAAGAAGAAAAGGGATCT+TGG	-	chr1_4:51583680-51583699	Msa0168720:intron	35.0%
!!	TTCTGGTTTCGATTCTTGAT+AGG	-	chr1_4:51583769-51583788	Msa0168720:intron	35.0%
	AAATGTAGTAGATTCTAGCC+TGG	+	chr1_4:51583795-51583814	None:intergenic	35.0%
	CTGATTCTGATTCAAAAAGG+GGG	+	chr1_4:51583943-51583962	None:intergenic	35.0%
	CAATCACAAACCCTAATTAC+TGG	+	chr1_4:51581815-51581834	None:intergenic	35.0%
	CTCTGTTCTTCTTTGTTGAT+TGG	+	chr1_4:51581874-51581893	None:intergenic	35.0%
!!	TGAATGAATTTTGGGGGAAA+AGG	+	chr1_4:51581983-51582002	None:intergenic	35.0%
!	CAGACATGAATGAATTTTGG+GGG	+	chr1_4:51581989-51582008	None:intergenic	35.0%
	TGACACTTACACTTTGATGT+TGG	-	chr1_4:51582501-51582520	Msa0168720:intron	35.0%
	AACACTTCAGATTAAGAGTG+TGG	+	chr1_4:51582587-51582606	None:intergenic	35.0%
!	ACACTCTTAATCTGAAGTGT+TGG	-	chr1_4:51582586-51582605	Msa0168720:intron	35.0%
	AATATCTCATCGCTAGAATG+TGG	-	chr1_4:51582739-51582758	Msa0168720:intron	35.0%
	AAGGAATCTCTTCTACAATG+GGG	+	chr1_4:51582912-51582931	None:intergenic	35.0%
	CAAGGAATCTCTTCTACAAT+GGG	+	chr1_4:51582913-51582932	None:intergenic	35.0%
	ACAAGGAATCTCTTCTACAA+TGG	+	chr1_4:51582914-51582933	None:intergenic	35.0%
	AGATGGTTCATAAACAGTTG+TGG	-	chr1_4:51583025-51583044	Msa0168720:intron	35.0%
	CAAGAGTTTCTTGAGTTTCA+AGG	-	chr1_4:51583121-51583140	Msa0168720:intron	35.0%
	AACTAGAGTAGATATTTCCC+AGG	-	chr1_4:51583145-51583164	Msa0168720:intron	35.0%
	GCTAACTAAGTCACACAATA+TGG	+	chr1_4:51583236-51583255	None:intergenic	35.0%
	AGTAAACTAGTAGCTAAGCA+TGG	+	chr1_4:51583366-51583385	None:intergenic	35.0%
	TTTACTTACTTCATGTCTGC+AGG	-	chr1_4:51583380-51583399	Msa0168720:CDS	35.0%
	TTCAGAGCTTCAAAGTCAAT+TGG	+	chr1_4:51583431-51583450	None:intergenic	35.0%
	AGAGAGAAAGAAAACAAGAG+AGG	-	chr1_4:51583583-51583602	Msa0168720:intron	35.0%
!	GAATCTTTCCTTTTCTCAGA+AGG	-	chr1_4:51583658-51583677	Msa0168720:intron	35.0%
!!	CTTCTTTTCCTTCTGAGAAA+AGG	+	chr1_4:51583669-51583688	None:intergenic	35.0%
	CTCAGAAGGAAAAGAAGAAA+AGG	-	chr1_4:51583672-51583691	Msa0168720:intron	35.0%
	GAAAAGAAGAAAAGGGATCT+TGG	-	chr1_4:51583680-51583699	Msa0168720:intron	35.0%
!!	TTCTGGTTTCGATTCTTGAT+AGG	-	chr1_4:51583769-51583788	Msa0168720:intron	35.0%
	AAATGTAGTAGATTCTAGCC+TGG	+	chr1_4:51583795-51583814	None:intergenic	35.0%
	CTGATTCTGATTCAAAAAGG+GGG	+	chr1_4:51583943-51583962	None:intergenic	35.0%
	AAACCATTGAGGAATCGCAA+TGG	-	chr1_4:51581776-51581795	Msa0168720:three_prime_UTR	40.0%
	ATTCCATTGCGATTCCTCAA+TGG	+	chr1_4:51581782-51581801	None:intergenic	40.0%
	AATTAGGGTTTGTGATTGCG+AGG	-	chr1_4:51581817-51581836	Msa0168720:three_prime_UTR	40.0%
!	ATTCCTGATTGTTGCTTGCT+GGG	+	chr1_4:51581844-51581863	None:intergenic	40.0%
	TCATCATCATCATCACTCCA+TGG	+	chr1_4:51582309-51582328	None:intergenic	40.0%
	ACTGGAGCCAAAAAATCCAA+AGG	-	chr1_4:51582360-51582379	Msa0168720:intron	40.0%
	AATCTAATCGTGTGTGGTGT+TGG	-	chr1_4:51582551-51582570	Msa0168720:intron	40.0%
!	CTTGAATCTAGGATGTGGAT+AGG	-	chr1_4:51582661-51582680	Msa0168720:intron	40.0%
	TCATCCAAGGTATGAAACCT+CGG	-	chr1_4:51582770-51582789	Msa0168720:intron	40.0%
	TTCAAGTAATTGCAACACCG+AGG	+	chr1_4:51582790-51582809	None:intergenic	40.0%
	TGTAGCTGATATAGGAGTTC+TGG	-	chr1_4:51582821-51582840	Msa0168720:intron	40.0%
!!	TTTGAAGCTCTGAAGCGATA+CGG	-	chr1_4:51583437-51583456	Msa0168720:exon	40.0%
	TTTGTGTCATCTTCTTTGGG+TGG	+	chr1_4:51583497-51583516	None:intergenic	40.0%
!	ACACAAAGAAAGATTGGTCC+TGG	-	chr1_4:51583510-51583529	Msa0168720:intron	40.0%
	AAAGGAAAAACGTGTCGAGA+AGG	-	chr1_4:51583541-51583560	Msa0168720:intron	40.0%
	AAATGCCAACTGTTCTGACT+AGG	-	chr1_4:51583624-51583643	Msa0168720:intron	40.0%
	TCATTCCTAGTCAGAACAGT+TGG	+	chr1_4:51583632-51583651	None:intergenic	40.0%
	AAGAAGAGAAAAGGCTGTTG+AGG	-	chr1_4:51583732-51583751	Msa0168720:intron	40.0%
	AGAAGAGAAAAGGCTGTTGA+GGG	-	chr1_4:51583733-51583752	Msa0168720:intron	40.0%
	AGGGACAATGGAGTTTATTC+TGG	-	chr1_4:51583752-51583771	Msa0168720:intron	40.0%
!	GGTTTTTGTTAGTTACACCC+CGG	+	chr1_4:51581761-51581780	None:intergenic	40.0%
	AAACCATTGAGGAATCGCAA+TGG	-	chr1_4:51581776-51581795	Msa0168720:three_prime_UTR	40.0%
	ATTCCATTGCGATTCCTCAA+TGG	+	chr1_4:51581782-51581801	None:intergenic	40.0%
	AATTAGGGTTTGTGATTGCG+AGG	-	chr1_4:51581817-51581836	Msa0168720:three_prime_UTR	40.0%
!	ATTCCTGATTGTTGCTTGCT+GGG	+	chr1_4:51581844-51581863	None:intergenic	40.0%
	TCATCATCATCATCACTCCA+TGG	+	chr1_4:51582309-51582328	None:intergenic	40.0%
	ACTGGAGCCAAAAAATCCAA+AGG	-	chr1_4:51582360-51582379	Msa0168720:intron	40.0%
	AATCTAATCGTGTGTGGTGT+TGG	-	chr1_4:51582551-51582570	Msa0168720:intron	40.0%
!	CTTGAATCTAGGATGTGGAT+AGG	-	chr1_4:51582661-51582680	Msa0168720:intron	40.0%
	TCATCCAAGGTATGAAACCT+CGG	-	chr1_4:51582770-51582789	Msa0168720:intron	40.0%
	TTCAAGTAATTGCAACACCG+AGG	+	chr1_4:51582790-51582809	None:intergenic	40.0%
	TGTAGCTGATATAGGAGTTC+TGG	-	chr1_4:51582821-51582840	Msa0168720:intron	40.0%
!!	TTTGAAGCTCTGAAGCGATA+CGG	-	chr1_4:51583437-51583456	Msa0168720:exon	40.0%
	TTTGTGTCATCTTCTTTGGG+TGG	+	chr1_4:51583497-51583516	None:intergenic	40.0%
!	ACACAAAGAAAGATTGGTCC+TGG	-	chr1_4:51583510-51583529	Msa0168720:intron	40.0%
	AAAGGAAAAACGTGTCGAGA+AGG	-	chr1_4:51583541-51583560	Msa0168720:intron	40.0%
	AAATGCCAACTGTTCTGACT+AGG	-	chr1_4:51583624-51583643	Msa0168720:intron	40.0%
	TCATTCCTAGTCAGAACAGT+TGG	+	chr1_4:51583632-51583651	None:intergenic	40.0%
	AAGAAGAGAAAAGGCTGTTG+AGG	-	chr1_4:51583732-51583751	Msa0168720:intron	40.0%
	AGAAGAGAAAAGGCTGTTGA+GGG	-	chr1_4:51583733-51583752	Msa0168720:intron	40.0%
	AGGGACAATGGAGTTTATTC+TGG	-	chr1_4:51583752-51583771	Msa0168720:intron	40.0%
!	GATTCCTGATTGTTGCTTGC+TGG	+	chr1_4:51581845-51581864	None:intergenic	45.0%
	AAAGAAGCAGAGACAGACAG+AGG	+	chr1_4:51581897-51581916	None:intergenic	45.0%
	GTCTGTCTCTGCTTCTTTCT+AGG	-	chr1_4:51581899-51581918	Msa0168720:three_prime_UTR	45.0%
	CTATGAAGAGGACAATGCCA+TGG	-	chr1_4:51582289-51582308	Msa0168720:CDS	45.0%
	GACGCACACCAAAATACCTT+TGG	+	chr1_4:51582379-51582398	None:intergenic	45.0%
	TGCTACAGAGTGTGTGTGAT+AGG	-	chr1_4:51582609-51582628	Msa0168720:intron	45.0%
!	TGTGGATTGACACTCATCCA+AGG	-	chr1_4:51582757-51582776	Msa0168720:intron	45.0%
	AACACCGAGGTTTCATACCT+TGG	+	chr1_4:51582777-51582796	None:intergenic	45.0%
	ACTGACTGAAGGTCAAGATG+GGG	+	chr1_4:51582997-51583016	None:intergenic	45.0%
!	CACTGACTGAAGGTCAAGAT+GGG	+	chr1_4:51582998-51583017	None:intergenic	45.0%
!!	TCTTGCATTGCACTGACTGA+AGG	+	chr1_4:51583008-51583027	None:intergenic	45.0%
	TCAGTCAGTGCAATGCAAGA+TGG	-	chr1_4:51583008-51583027	Msa0168720:intron	45.0%
	CTAGTAGCTAAGCATGGCAA+TGG	+	chr1_4:51583360-51583379	None:intergenic	45.0%
	CTGAAGCGATACGGCTATAA+AGG	-	chr1_4:51583446-51583465	Msa0168720:exon	45.0%
	AAGCGATACGGCTATAAAGG+CGG	-	chr1_4:51583449-51583468	Msa0168720:exon	45.0%
!!	GGAGGTACCTTTAAGACAGA+AGG	+	chr1_4:51583476-51583495	None:intergenic	45.0%
!	TTTTTCCTTTCCACTGGACC+AGG	+	chr1_4:51583531-51583550	None:intergenic	45.0%
!	GACACGTTTTTCCTTTCCAC+TGG	+	chr1_4:51583537-51583556	None:intergenic	45.0%
	AGTTGGCATTTGCTCTCCTA+GGG	+	chr1_4:51583615-51583634	None:intergenic	45.0%
	AAAAGGCTGTTGAGGGACAA+TGG	-	chr1_4:51583740-51583759	Msa0168720:intron	45.0%
	GTTTCGATTCTTGATAGGCC+AGG	-	chr1_4:51583774-51583793	Msa0168720:intron	45.0%
!	GATTCCTGATTGTTGCTTGC+TGG	+	chr1_4:51581845-51581864	None:intergenic	45.0%
	AAAGAAGCAGAGACAGACAG+AGG	+	chr1_4:51581897-51581916	None:intergenic	45.0%
	GTCTGTCTCTGCTTCTTTCT+AGG	-	chr1_4:51581899-51581918	Msa0168720:three_prime_UTR	45.0%
	CTATGAAGAGGACAATGCCA+TGG	-	chr1_4:51582289-51582308	Msa0168720:CDS	45.0%
	GACGCACACCAAAATACCTT+TGG	+	chr1_4:51582379-51582398	None:intergenic	45.0%
	TGCTACAGAGTGTGTGTGAT+AGG	-	chr1_4:51582609-51582628	Msa0168720:intron	45.0%
!	TGTGGATTGACACTCATCCA+AGG	-	chr1_4:51582757-51582776	Msa0168720:intron	45.0%
	AACACCGAGGTTTCATACCT+TGG	+	chr1_4:51582777-51582796	None:intergenic	45.0%
	ACTGACTGAAGGTCAAGATG+GGG	+	chr1_4:51582997-51583016	None:intergenic	45.0%
!	CACTGACTGAAGGTCAAGAT+GGG	+	chr1_4:51582998-51583017	None:intergenic	45.0%
!!	TCTTGCATTGCACTGACTGA+AGG	+	chr1_4:51583008-51583027	None:intergenic	45.0%
	TCAGTCAGTGCAATGCAAGA+TGG	-	chr1_4:51583008-51583027	Msa0168720:intron	45.0%
	CTAGTAGCTAAGCATGGCAA+TGG	+	chr1_4:51583360-51583379	None:intergenic	45.0%
	CTGAAGCGATACGGCTATAA+AGG	-	chr1_4:51583446-51583465	Msa0168720:exon	45.0%
	AAGCGATACGGCTATAAAGG+CGG	-	chr1_4:51583449-51583468	Msa0168720:exon	45.0%
!!	GGAGGTACCTTTAAGACAGA+AGG	+	chr1_4:51583476-51583495	None:intergenic	45.0%
!	TTTTTCCTTTCCACTGGACC+AGG	+	chr1_4:51583531-51583550	None:intergenic	45.0%
!	GACACGTTTTTCCTTTCCAC+TGG	+	chr1_4:51583537-51583556	None:intergenic	45.0%
	AGTTGGCATTTGCTCTCCTA+GGG	+	chr1_4:51583615-51583634	None:intergenic	45.0%
	AAAAGGCTGTTGAGGGACAA+TGG	-	chr1_4:51583740-51583759	Msa0168720:intron	45.0%
	GTTTCGATTCTTGATAGGCC+AGG	-	chr1_4:51583774-51583793	Msa0168720:intron	45.0%
!!	GCACTGACTGAAGGTCAAGA+TGG	+	chr1_4:51582999-51583018	None:intergenic	50.0%
	AGCGATACGGCTATAAAGGC+GGG	-	chr1_4:51583450-51583469	Msa0168720:exon	50.0%
	GTGTCATCTTCTTTGGGTGG+AGG	+	chr1_4:51583494-51583513	None:intergenic	50.0%
!	AAAGATTGGTCCTGGTCCAG+TGG	-	chr1_4:51583518-51583537	Msa0168720:intron	50.0%
	ACAAGAGAGGCTCTTTCCCT+AGG	-	chr1_4:51583596-51583615	Msa0168720:intron	50.0%
	CAGTTGGCATTTGCTCTCCT+AGG	+	chr1_4:51583616-51583635	None:intergenic	50.0%
	GGATCTTGGTCAAGCAAGCA+GGG	-	chr1_4:51583694-51583713	Msa0168720:intron	50.0%
	GATCTTGGTCAAGCAAGCAG+GGG	-	chr1_4:51583695-51583714	Msa0168720:intron	50.0%
	ATCTTGGTCAAGCAAGCAGG+GGG	-	chr1_4:51583696-51583715	Msa0168720:intron	50.0%
!!	GCACTGACTGAAGGTCAAGA+TGG	+	chr1_4:51582999-51583018	None:intergenic	50.0%
	AGCGATACGGCTATAAAGGC+GGG	-	chr1_4:51583450-51583469	Msa0168720:exon	50.0%
	GTGTCATCTTCTTTGGGTGG+AGG	+	chr1_4:51583494-51583513	None:intergenic	50.0%
!	AAAGATTGGTCCTGGTCCAG+TGG	-	chr1_4:51583518-51583537	Msa0168720:intron	50.0%
	ACAAGAGAGGCTCTTTCCCT+AGG	-	chr1_4:51583596-51583615	Msa0168720:intron	50.0%
	CAGTTGGCATTTGCTCTCCT+AGG	+	chr1_4:51583616-51583635	None:intergenic	50.0%
	GGATCTTGGTCAAGCAAGCA+GGG	-	chr1_4:51583694-51583713	Msa0168720:intron	50.0%
	GATCTTGGTCAAGCAAGCAG+GGG	-	chr1_4:51583695-51583714	Msa0168720:intron	50.0%
	ATCTTGGTCAAGCAAGCAGG+GGG	-	chr1_4:51583696-51583715	Msa0168720:intron	50.0%
	GGACCCAGCAAGCAACAATC+AGG	-	chr1_4:51581838-51581857	Msa0168720:three_prime_UTR	55.0%
	CGCGTGCAGCAGTAACATTG+AGG	+	chr1_4:51582018-51582037	None:intergenic	55.0%
	AATGTTACTGCTGCACGCGC+AGG	-	chr1_4:51582019-51582038	Msa0168720:CDS	55.0%
	AGGCGGGCCTTCTGTCTTAA+AGG	-	chr1_4:51583466-51583485	Msa0168720:intron	55.0%
	TTGGTCCTGGTCCAGTGGAA+AGG	-	chr1_4:51583523-51583542	Msa0168720:intron	55.0%
	GGGATCTTGGTCAAGCAAGC+AGG	-	chr1_4:51583693-51583712	Msa0168720:intron	55.0%
	GGACCCAGCAAGCAACAATC+AGG	-	chr1_4:51581838-51581857	Msa0168720:three_prime_UTR	55.0%
	CGCGTGCAGCAGTAACATTG+AGG	+	chr1_4:51582018-51582037	None:intergenic	55.0%
	AATGTTACTGCTGCACGCGC+AGG	-	chr1_4:51582019-51582038	Msa0168720:CDS	55.0%
	AGGCGGGCCTTCTGTCTTAA+AGG	-	chr1_4:51583466-51583485	Msa0168720:intron	55.0%
	TTGGTCCTGGTCCAGTGGAA+AGG	-	chr1_4:51583523-51583542	Msa0168720:intron	55.0%
	GGGATCTTGGTCAAGCAAGC+AGG	-	chr1_4:51583693-51583712	Msa0168720:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	51581760	51583984	51581760	ID=Msa0168720;Name=Msa0168720
chr1_4	mRNA	51581760	51583984	51581760	ID=Msa0168720-mRNA-1;Parent=Msa0168720;Name=Msa0168720-mRNA-1;_AED=0.29;_eAED=0.29;_QI=187\|1\|1\|1\|0.5\|0.33\|3\|197\|158
chr1_4	exon	51581760	51582342	51581760	ID=Msa0168720-mRNA-1:exon:15248;Parent=Msa0168720-mRNA-1
chr1_4	exon	51583363	51583479	51583363	ID=Msa0168720-mRNA-1:exon:15247;Parent=Msa0168720-mRNA-1
chr1_4	exon	51583824	51583984	51583824	ID=Msa0168720-mRNA-1:exon:15246;Parent=Msa0168720-mRNA-1
chr1_4	five_prime_UTR	51583824	51583984	51583824	ID=Msa0168720-mRNA-1:five_prime_utr;Parent=Msa0168720-mRNA-1
chr1_4	five_prime_UTR	51583454	51583479	51583454	ID=Msa0168720-mRNA-1:five_prime_utr;Parent=Msa0168720-mRNA-1
chr1_4	CDS	51583363	51583453	51583363	ID=Msa0168720-mRNA-1:cds;Parent=Msa0168720-mRNA-1
chr1_4	CDS	51581957	51582342	51581957	ID=Msa0168720-mRNA-1:cds;Parent=Msa0168720-mRNA-1
chr1_4	three_prime_UTR	51581760	51581956	51581760	ID=Msa0168720-mRNA-1:three_prime_utr;Parent=Msa0168720-mRNA-1

Gene Sequence

>Msa0168720

ATGAAGAGGACAATGCCATGGAGTGATGATGATGATGACTCATCTTCAGACTCTGAAAATGATAGTGAAACTGGAGCCAAAAAATCCAAAGGTAAATCTACAAAGCAGAAAAGTGCTCCAATTGACTTTGAAGCTCTGAAGCGATACGGCTATAAAGGCGGGCCTTCTGTCTTAAAGGTACCTCCACCCAAAGAAGATGACACAAAGAAAGATTGGTCCTGGTCCAGTGGAAAGGAAAAACGTGTCGAGAAGGAAGTTGAAGAAACATATGAAGAGAGAAAGAAAACAAGAGAGGCTCTTTCCCTAGGAGAGCAAATGCCAACTGTTCTGACTAGGAATGACAAGAAGAATCTTTCCTTTTCTCAGAAGGAAAAGAAGAAAAGGGATCTTGGTCAAGCAAGCAGGGGGAAAAATTATGTTGAAGAAGAGAAAAGGCTGTTGAGGGACAATGGAGTTTATTCTGGTTTCGATTCTTGA

Protein sequence

>Msa0168720

MKRTMPWSDDDDDSSSDSENDSETGAKKSKGKSTKQKSAPIDFEALKRYGYKGGPSVLKVPPPKEDDTKKDWSWSSGKEKRVEKEVEETYEERKKTREALSLGEQMPTVLTRNDKKNLSFSQKEKKKRDLGQASRGKNYVEEEKRLLRDNGVYSGFDS*