Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449820 | A0A072U5F3 | 98.077 | 52 | 1 | 0 | 18 | 69 | 545 | 596 | 2.18e-27 | 113 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1449820 | 0.814930 | 1.198620e-51 | -8.615850e-47 |
| Msa0004860 | Msa1449820 | 0.809187 | 2.141414e-50 | -8.615850e-47 |
| Msa0004880 | Msa1449820 | 0.804882 | 1.744818e-49 | -8.615850e-47 |
| Msa0004920 | Msa1449820 | 0.826890 | 2.116448e-54 | -8.615850e-47 |
| Msa0006070 | Msa1449820 | 0.804618 | 1.980836e-49 | -8.615850e-47 |
| Msa0014710 | Msa1449820 | 0.802711 | 4.928034e-49 | -8.615850e-47 |
| Msa0017510 | Msa1449820 | 0.845890 | 3.062506e-59 | -8.615850e-47 |
| Msa0037700 | Msa1449820 | 0.825495 | 4.545165e-54 | -8.615850e-47 |
| Msa0040450 | Msa1449820 | 0.810811 | 9.572570e-51 | -8.615850e-47 |
| Msa0044020 | Msa1449820 | 0.802329 | 5.908370e-49 | -8.615850e-47 |
| Msa0051770 | Msa1449820 | 0.825390 | 4.811765e-54 | -8.615850e-47 |
| Msa0067620 | Msa1449820 | 0.807952 | 3.931875e-50 | -8.615850e-47 |
| Msa0068680 | Msa1449820 | 0.818159 | 2.267272e-52 | -8.615850e-47 |
| Msa0074700 | Msa1449820 | 0.809820 | 1.566579e-50 | -8.615850e-47 |
| Msa0081930 | Msa1449820 | 0.800146 | 1.652399e-48 | -8.615850e-47 |
| Msa0086650 | Msa1449820 | 0.806234 | 9.082109e-50 | -8.615850e-47 |
| Msa0101710 | Msa1449820 | 0.804819 | 1.798453e-49 | -8.615850e-47 |
| Msa0110970 | Msa1449820 | 0.804170 | 2.456540e-49 | -8.615850e-47 |
| Msa0112750 | Msa1449820 | 0.825865 | 3.712563e-54 | -8.615850e-47 |
| Msa0113750 | Msa1449820 | 0.807033 | 6.158346e-50 | -8.615850e-47 |
| Msa0119850 | Msa1449820 | 0.824891 | 6.312061e-54 | -8.615850e-47 |
| Msa0120040 | Msa1449820 | -0.809093 | 2.243698e-50 | -8.615850e-47 |
| Msa1351730 | Msa1449820 | 0.801457 | 8.921670e-49 | -8.615850e-47 |
| Msa1357530 | Msa1449820 | 0.804637 | 1.963447e-49 | -8.615850e-47 |
| Msa1359040 | Msa1449820 | 0.843104 | 1.720538e-58 | -8.615850e-47 |
| Msa1384350 | Msa1449820 | 0.810369 | 1.193120e-50 | -8.615850e-47 |
| Msa1385670 | Msa1449820 | 0.803786 | 2.952062e-49 | -8.615850e-47 |
| Msa1386780 | Msa1449820 | 0.803595 | 3.233569e-49 | -8.615850e-47 |
| Msa1390050 | Msa1449820 | 0.803472 | 3.430412e-49 | -8.615850e-47 |
| Msa1392260 | Msa1449820 | 0.822700 | 2.058280e-53 | -8.615850e-47 |
| Msa1411020 | Msa1449820 | 0.808796 | 2.597500e-50 | -8.615850e-47 |
| Msa1424290 | Msa1449820 | 0.806587 | 7.651172e-50 | -8.615850e-47 |
| Msa1424450 | Msa1449820 | 0.824898 | 6.289040e-54 | -8.615850e-47 |
| Msa1425010 | Msa1449820 | 0.822877 | 1.872303e-53 | -8.615850e-47 |
| Msa1426030 | Msa1449820 | 0.810537 | 1.097214e-50 | -8.615850e-47 |
| Msa1427230 | Msa1449820 | 0.807038 | 6.142797e-50 | -8.615850e-47 |
| Msa1429900 | Msa1449820 | 0.823999 | 1.023602e-53 | -8.615850e-47 |
| Msa1434350 | Msa1449820 | 0.806492 | 8.012734e-50 | -8.615850e-47 |
| Msa1435370 | Msa1449820 | 0.814774 | 1.298215e-51 | -8.615850e-47 |
| Msa1439320 | Msa1449820 | 0.806212 | 9.177931e-50 | -8.615850e-47 |
| Msa1440000 | Msa1449820 | 0.833747 | 4.465792e-56 | -8.615850e-47 |
| Msa1440910 | Msa1449820 | 0.810636 | 1.044316e-50 | -8.615850e-47 |
| Msa1445610 | Msa1449820 | -0.807649 | 4.560365e-50 | -8.615850e-47 |
| Msa1449820 | Msa1452240 | 0.829574 | 4.769947e-55 | -8.615850e-47 |
| Msa1449820 | Msa1454120 | 0.825633 | 4.214330e-54 | -8.615850e-47 |
| Msa1449820 | Msa1460830 | 0.805328 | 1.407750e-49 | -8.615850e-47 |
| Msa1449820 | Msa1461280 | 0.814779 | 1.295049e-51 | -8.615850e-47 |
| Msa1449820 | Msa1463670 | 0.826019 | 3.412471e-54 | -8.615850e-47 |
| Msa1449820 | Msa1464940 | 0.813591 | 2.368369e-51 | -8.615850e-47 |
| Msa1449820 | Msa1466540 | 0.803719 | 3.047962e-49 | -8.615850e-47 |
| Msa0607050 | Msa1449820 | 0.830942 | 2.209832e-55 | -8.615850e-47 |
| Msa0610430 | Msa1449820 | 0.831811 | 1.351127e-55 | -8.615850e-47 |
| Msa0631120 | Msa1449820 | 0.825921 | 3.601310e-54 | -8.615850e-47 |
| Msa0631200 | Msa1449820 | 0.816493 | 5.376044e-52 | -8.615850e-47 |
| Msa0633840 | Msa1449820 | 0.833721 | 4.533236e-56 | -8.615850e-47 |
| Msa0638070 | Msa1449820 | 0.808373 | 3.197324e-50 | -8.615850e-47 |
| Msa0638320 | Msa1449820 | 0.803033 | 4.228775e-49 | -8.615850e-47 |
| Msa0643180 | Msa1449820 | 0.819835 | 9.428259e-53 | -8.615850e-47 |
| Msa0643220 | Msa1449820 | 0.812417 | 4.284016e-51 | -8.615850e-47 |
| Msa0657970 | Msa1449820 | 0.843682 | 1.205476e-58 | -8.615850e-47 |
| Msa0661190 | Msa1449820 | -0.815885 | 7.351727e-52 | -8.615850e-47 |
| Msa0663390 | Msa1449820 | 0.810642 | 1.041669e-50 | -8.615850e-47 |
| Msa0669440 | Msa1449820 | 0.839737 | 1.325043e-57 | -8.615850e-47 |
| Msa0673460 | Msa1449820 | 0.814409 | 1.563444e-51 | -8.615850e-47 |
| Msa0682840 | Msa1449820 | 0.812074 | 5.091084e-51 | -8.615850e-47 |
| Msa0682900 | Msa1449820 | 0.813085 | 3.059399e-51 | -8.615850e-47 |
| Msa0690150 | Msa1449820 | 0.825613 | 4.259735e-54 | -8.615850e-47 |
| Msa0691380 | Msa1449820 | 0.810650 | 1.037513e-50 | -8.615850e-47 |
| Msa0692230 | Msa1449820 | 0.805752 | 1.146866e-49 | -8.615850e-47 |
| Msa0692950 | Msa1449820 | 0.802115 | 6.538186e-49 | -8.615850e-47 |
| Msa0693380 | Msa1449820 | 0.811032 | 8.575870e-51 | -8.615850e-47 |
| Msa0693600 | Msa1449820 | 0.803810 | 2.918906e-49 | -8.615850e-47 |
| Msa0696640 | Msa1449820 | 0.810489 | 1.124033e-50 | -8.615850e-47 |
| Msa0709500 | Msa1449820 | 0.815480 | 9.046574e-52 | -8.615850e-47 |
| Msa0711780 | Msa1449820 | 0.803847 | 2.867120e-49 | -8.615850e-47 |
| Msa0716840 | Msa1449820 | 0.816267 | 6.038276e-52 | -8.615850e-47 |
| Msa0739120 | Msa1449820 | 0.819085 | 1.397549e-52 | -8.615850e-47 |
| Msa0745790 | Msa1449820 | 0.816740 | 4.732217e-52 | -8.615850e-47 |
| Msa0750430 | Msa1449820 | 0.804642 | 1.958529e-49 | -8.615850e-47 |
| Msa0756630 | Msa1449820 | -0.814581 | 1.432483e-51 | -8.615850e-47 |
| Msa0762970 | Msa1449820 | 0.801247 | 9.851963e-49 | -8.615850e-47 |
| Msa0769920 | Msa1449820 | 0.830284 | 3.202586e-55 | -8.615850e-47 |
| Msa0771720 | Msa1449820 | 0.810705 | 1.009281e-50 | -8.615850e-47 |
| Msa0788710 | Msa1449820 | 0.810502 | 1.116371e-50 | -8.615850e-47 |
| Msa0790510 | Msa1449820 | 0.812968 | 3.246006e-51 | -8.615850e-47 |
| Msa0790850 | Msa1449820 | 0.812834 | 3.472982e-51 | -8.615850e-47 |
| Msa0794670 | Msa1449820 | 0.802372 | 5.787781e-49 | -8.615850e-47 |
| Msa0796700 | Msa1449820 | 0.808963 | 2.391581e-50 | -8.615850e-47 |
| Msa0808270 | Msa1449820 | 0.822309 | 2.537291e-53 | -8.615850e-47 |
| Msa0816590 | Msa1449820 | 0.805515 | 1.286391e-49 | -8.615850e-47 |
| Msa0840820 | Msa1449820 | 0.800469 | 1.420328e-48 | -8.615850e-47 |
| Msa0122590 | Msa1449820 | 0.805953 | 1.040851e-49 | -8.615850e-47 |
| Msa0133130 | Msa1449820 | 0.811423 | 7.052718e-51 | -8.615850e-47 |
| Msa0140780 | Msa1449820 | 0.818359 | 2.042215e-52 | -8.615850e-47 |
| Msa0142660 | Msa1449820 | 0.806201 | 9.229786e-50 | -8.615850e-47 |
| Msa0157290 | Msa1449820 | 0.844678 | 6.513484e-59 | -8.615850e-47 |
| Msa0159930 | Msa1449820 | 0.802283 | 6.037287e-49 | -8.615850e-47 |
| Msa0166870 | Msa1449820 | 0.800062 | 1.719110e-48 | -8.615850e-47 |
| Msa0168720 | Msa1449820 | 0.813412 | 2.593564e-51 | -8.615850e-47 |
| Msa0173990 | Msa1449820 | 0.818631 | 1.772639e-52 | -8.615850e-47 |
| Msa0178930 | Msa1449820 | 0.800487 | 1.408584e-48 | -8.615850e-47 |
| Msa0184960 | Msa1449820 | 0.805140 | 1.541130e-49 | -8.615850e-47 |
| Msa0188830 | Msa1449820 | 0.820329 | 7.267117e-53 | -8.615850e-47 |
| Msa0200260 | Msa1449820 | 0.813693 | 2.249706e-51 | -8.615850e-47 |
| Msa0202950 | Msa1449820 | 0.810607 | 1.059669e-50 | -8.615850e-47 |
| Msa0216240 | Msa1449820 | 0.817232 | 3.669279e-52 | -8.615850e-47 |
| Msa0220580 | Msa1449820 | 0.827989 | 1.153381e-54 | -8.615850e-47 |
| Msa0223740 | Msa1449820 | 0.807269 | 5.489462e-50 | -8.615850e-47 |
| Msa0233350 | Msa1449820 | 0.802586 | 5.229066e-49 | -8.615850e-47 |
| Msa1233500 | Msa1449820 | 0.836172 | 1.093252e-56 | -8.615850e-47 |
| Msa1233890 | Msa1449820 | 0.809890 | 1.512784e-50 | -8.615850e-47 |
| Msa1247250 | Msa1449820 | 0.817617 | 3.005213e-52 | -8.615850e-47 |
| Msa1249240 | Msa1449820 | 0.802039 | 6.778665e-49 | -8.615850e-47 |
| Msa1250890 | Msa1449820 | 0.825321 | 4.997198e-54 | -8.615850e-47 |
| Msa1252140 | Msa1449820 | 0.806486 | 8.035050e-50 | -8.615850e-47 |
| Msa1253020 | Msa1449820 | 0.806480 | 8.058965e-50 | -8.615850e-47 |
| Msa1267430 | Msa1449820 | 0.812661 | 3.788561e-51 | -8.615850e-47 |
| Msa1267960 | Msa1449820 | 0.801477 | 8.840913e-49 | -8.615850e-47 |
| Msa1279210 | Msa1449820 | 0.812139 | 4.926155e-51 | -8.615850e-47 |
| Msa1283860 | Msa1449820 | 0.803963 | 2.712228e-49 | -8.615850e-47 |
| Msa1293280 | Msa1449820 | 0.811845 | 5.710895e-51 | -8.615850e-47 |
| Msa1294480 | Msa1449820 | 0.803631 | 3.178471e-49 | -8.615850e-47 |
| Msa1302190 | Msa1449820 | -0.803546 | 3.310959e-49 | -8.615850e-47 |
| Msa1305190 | Msa1449820 | 0.814166 | 1.769296e-51 | -8.615850e-47 |
| Msa1305340 | Msa1449820 | 0.840419 | 8.797238e-58 | -8.615850e-47 |
| Msa1306430 | Msa1449820 | 0.838084 | 3.546712e-57 | -8.615850e-47 |
| Msa1306840 | Msa1449820 | 0.832121 | 1.132744e-55 | -8.615850e-47 |
| Msa1306850 | Msa1449820 | 0.801632 | 8.216679e-49 | -8.615850e-47 |
| Msa1314340 | Msa1449820 | 0.827690 | 1.361122e-54 | -8.615850e-47 |
| Msa1320620 | Msa1449820 | 0.813861 | 2.066001e-51 | -8.615850e-47 |
| Msa1322190 | Msa1449820 | 0.808381 | 3.185774e-50 | -8.615850e-47 |
| Msa1327550 | Msa1449820 | 0.818037 | 2.415667e-52 | -8.615850e-47 |
| Msa1331910 | Msa1449820 | 0.817464 | 3.253281e-52 | -8.615850e-47 |
| Msa1333410 | Msa1449820 | 0.837340 | 5.507169e-57 | -8.615850e-47 |
| Msa1340260 | Msa1449820 | 0.805071 | 1.593507e-49 | -8.615850e-47 |
| Msa1340650 | Msa1449820 | 0.825503 | 4.523338e-54 | -8.615850e-47 |
| Msa1343070 | Msa1449820 | 0.815470 | 9.094058e-52 | -8.615850e-47 |
| Msa0373930 | Msa1449820 | 0.842231 | 2.933697e-58 | -8.615850e-47 |
| Msa0379640 | Msa1449820 | 0.812264 | 4.627515e-51 | -8.615850e-47 |
| Msa0380740 | Msa1449820 | 0.811264 | 7.635358e-51 | -8.615850e-47 |
| Msa0385580 | Msa1449820 | 0.805726 | 1.161334e-49 | -8.615850e-47 |
| Msa0389340 | Msa1449820 | 0.804090 | 2.552608e-49 | -8.615850e-47 |
| Msa0398710 | Msa1449820 | 0.816092 | 6.607222e-52 | -8.615850e-47 |
| Msa0410650 | Msa1449820 | 0.819824 | 9.481544e-53 | -8.615850e-47 |
| Msa0426360 | Msa1449820 | 0.813334 | 2.698417e-51 | -8.615850e-47 |
| Msa0426400 | Msa1449820 | 0.812385 | 4.355003e-51 | -8.615850e-47 |
| Msa0433640 | Msa1449820 | 0.815657 | 8.261545e-52 | -8.615850e-47 |
| Msa0440750 | Msa1449820 | 0.800645 | 1.307787e-48 | -8.615850e-47 |
| Msa0442200 | Msa1449820 | 0.811694 | 6.160186e-51 | -8.615850e-47 |
| Msa0443920 | Msa1449820 | 0.807399 | 5.150598e-50 | -8.615850e-47 |
| Msa0466390 | Msa1449820 | 0.802380 | 5.766467e-49 | -8.615850e-47 |
| Msa0477080 | Msa1449820 | 0.817506 | 3.184004e-52 | -8.615850e-47 |
| Msa0477130 | Msa1449820 | -0.800953 | 1.131432e-48 | -8.615850e-47 |
| Msa0479970 | Msa1449820 | 0.834817 | 2.406853e-56 | -8.615850e-47 |
| Msa0481530 | Msa1449820 | 0.816657 | 4.939503e-52 | -8.615850e-47 |
| Msa0993290 | Msa1449820 | 0.823478 | 1.355513e-53 | -8.615850e-47 |
| Msa0993600 | Msa1449820 | 0.819446 | 1.156405e-52 | -8.615850e-47 |
| Msa1002480 | Msa1449820 | 0.805117 | 1.558495e-49 | -8.615850e-47 |
| Msa1012320 | Msa1449820 | 0.803721 | 3.045694e-49 | -8.615850e-47 |
| Msa1014540 | Msa1449820 | 0.820346 | 7.199645e-53 | -8.615850e-47 |
| Msa1021540 | Msa1449820 | 0.801784 | 7.646414e-49 | -8.615850e-47 |
| Msa1023920 | Msa1449820 | 0.800938 | 1.139296e-48 | -8.615850e-47 |
| Msa1044420 | Msa1449820 | 0.814888 | 1.224656e-51 | -8.615850e-47 |
| Msa1075540 | Msa1449820 | 0.805613 | 1.226819e-49 | -8.615850e-47 |
| Msa1079590 | Msa1449820 | 0.804081 | 2.562920e-49 | -8.615850e-47 |
| Msa1082500 | Msa1449820 | 0.839912 | 1.192852e-57 | -8.615850e-47 |
| Msa1085200 | Msa1449820 | 0.821895 | 3.166216e-53 | -8.615850e-47 |
| Msa1097840 | Msa1449820 | 0.807500 | 4.903034e-50 | -8.615850e-47 |
| Msa1098400 | Msa1449820 | 0.801151 | 1.030634e-48 | -8.615850e-47 |
| Msa0243100 | Msa1449820 | 0.820212 | 7.727178e-53 | -8.615850e-47 |
| Msa0243710 | Msa1449820 | 0.804557 | 2.040680e-49 | -8.615850e-47 |
| Msa0244810 | Msa1449820 | 0.809112 | 2.222144e-50 | -8.615850e-47 |
| Msa0246430 | Msa1449820 | 0.815439 | 9.240253e-52 | -8.615850e-47 |
| Msa0249690 | Msa1449820 | 0.801512 | 8.696401e-49 | -8.615850e-47 |
| Msa0259370 | Msa1449820 | 0.816983 | 4.174832e-52 | -8.615850e-47 |
| Msa0262510 | Msa1449820 | 0.801686 | 8.010659e-49 | -8.615850e-47 |
| Msa0270100 | Msa1449820 | 0.825917 | 3.608769e-54 | -8.615850e-47 |
| Msa0280090 | Msa1449820 | 0.810863 | 9.327495e-51 | -8.615850e-47 |
| Msa0282250 | Msa1449820 | 0.824185 | 9.256648e-54 | -8.615850e-47 |
| Msa0284420 | Msa1449820 | 0.811307 | 7.473224e-51 | -8.615850e-47 |
| Msa0287650 | Msa1449820 | 0.829234 | 5.769858e-55 | -8.615850e-47 |
| Msa0298700 | Msa1449820 | 0.807555 | 4.774745e-50 | -8.615850e-47 |
| Msa0309770 | Msa1449820 | 0.823217 | 1.559834e-53 | -8.615850e-47 |
| Msa0311860 | Msa1449820 | 0.808311 | 3.296286e-50 | -8.615850e-47 |
| Msa0333030 | Msa1449820 | 0.826338 | 2.864992e-54 | -8.615850e-47 |
| Msa0334360 | Msa1449820 | 0.802243 | 6.153963e-49 | -8.615850e-47 |
| Msa0336420 | Msa1449820 | 0.830268 | 3.232448e-55 | -8.615850e-47 |
| Msa0342360 | Msa1449820 | 0.804400 | 2.200017e-49 | -8.615850e-47 |
| Msa0345970 | Msa1449820 | 0.800509 | 1.394146e-48 | -8.615850e-47 |
| Msa1116130 | Msa1449820 | -0.804293 | 2.315979e-49 | -8.615850e-47 |
| Msa1121440 | Msa1449820 | 0.811476 | 6.867863e-51 | -8.615850e-47 |
| Msa1125760 | Msa1449820 | 0.813536 | 2.435081e-51 | -8.615850e-47 |
| Msa1131220 | Msa1449820 | 0.833679 | 4.643176e-56 | -8.615850e-47 |
| Msa1143930 | Msa1449820 | -0.801388 | 9.218022e-49 | -8.615850e-47 |
| Msa1147280 | Msa1449820 | 0.801585 | 8.398623e-49 | -8.615850e-47 |
| Msa1154280 | Msa1449820 | 0.804153 | 2.476232e-49 | -8.615850e-47 |
| Msa1170410 | Msa1449820 | 0.803946 | 2.734412e-49 | -8.615850e-47 |
| Msa1170730 | Msa1449820 | 0.812770 | 3.586654e-51 | -8.615850e-47 |
| Msa1171360 | Msa1449820 | 0.815835 | 7.541549e-52 | -8.615850e-47 |
| Msa1171870 | Msa1449820 | 0.832739 | 7.958529e-56 | -8.615850e-47 |
| Msa1172670 | Msa1449820 | 0.806621 | 7.527123e-50 | -8.615850e-47 |
| Msa1179460 | Msa1449820 | 0.805480 | 1.307773e-49 | -8.615850e-47 |
| Msa1183100 | Msa1449820 | -0.805124 | 1.553105e-49 | -8.615850e-47 |
| Msa1197410 | Msa1449820 | 0.810286 | 1.243065e-50 | -8.615850e-47 |
| Msa1199220 | Msa1449820 | 0.813655 | 2.292641e-51 | -8.615850e-47 |
| Msa1203250 | Msa1449820 | 0.801361 | 9.335809e-49 | -8.615850e-47 |
| Msa1205130 | Msa1449820 | 0.803683 | 3.100948e-49 | -8.615850e-47 |
| Msa1214890 | Msa1449820 | 0.825285 | 5.094522e-54 | -8.615850e-47 |
| Msa0484780 | Msa1449820 | 0.842219 | 2.956119e-58 | -8.615850e-47 |
| Msa0493630 | Msa1449820 | 0.814676 | 1.364738e-51 | -8.615850e-47 |
| Msa0500360 | Msa1449820 | 0.815084 | 1.107851e-51 | -8.615850e-47 |
| Msa0503200 | Msa1449820 | 0.816105 | 6.562738e-52 | -8.615850e-47 |
| Msa0507680 | Msa1449820 | 0.813505 | 2.474624e-51 | -8.615850e-47 |
| Msa0509390 | Msa1449820 | 0.816837 | 4.500994e-52 | -8.615850e-47 |
| Msa0512900 | Msa1449820 | 0.815589 | 8.558162e-52 | -8.615850e-47 |
| Msa0515010 | Msa1449820 | 0.805345 | 1.396214e-49 | -8.615850e-47 |
| Msa0517110 | Msa1449820 | 0.812438 | 4.240078e-51 | -8.615850e-47 |
| Msa0519740 | Msa1449820 | 0.805379 | 1.373682e-49 | -8.615850e-47 |
| Msa0521430 | Msa1449820 | 0.818965 | 1.488555e-52 | -8.615850e-47 |
| Msa0521540 | Msa1449820 | 0.809868 | 1.529432e-50 | -8.615850e-47 |
| Msa0523460 | Msa1449820 | 0.814673 | 1.366490e-51 | -8.615850e-47 |
| Msa0536220 | Msa1449820 | 0.808299 | 3.315876e-50 | -8.615850e-47 |
| Msa0547360 | Msa1449820 | 0.804309 | 2.297859e-49 | -8.615850e-47 |
| Msa0550430 | Msa1449820 | 0.816748 | 4.711809e-52 | -8.615850e-47 |
| Msa0551890 | Msa1449820 | 0.805900 | 1.067762e-49 | -8.615850e-47 |
| Msa0555020 | Msa1449820 | 0.805321 | 1.412365e-49 | -8.615850e-47 |
| Msa0558690 | Msa1449820 | 0.805847 | 1.095418e-49 | -8.615850e-47 |
| Msa0563840 | Msa1449820 | 0.820197 | 7.789563e-53 | -8.615850e-47 |
| Msa0577500 | Msa1449820 | 0.832209 | 1.077090e-55 | -8.615850e-47 |
| Msa0585300 | Msa1449820 | 0.816602 | 5.082669e-52 | -8.615850e-47 |
| Msa0585560 | Msa1449820 | 0.805898 | 1.068881e-49 | -8.615850e-47 |
| Msa0597330 | Msa1449820 | 0.809169 | 2.160905e-50 | -8.615850e-47 |
| Msa0601850 | Msa1449820 | 0.801916 | 7.182756e-49 | -8.615850e-47 |
| Msa0871270 | Msa1449820 | 0.806165 | 9.391654e-50 | -8.615850e-47 |
| Msa0877410 | Msa1449820 | 0.809907 | 1.500066e-50 | -8.615850e-47 |
| Msa0880140 | Msa1449820 | 0.844194 | 8.790288e-59 | -8.615850e-47 |
| Msa0888530 | Msa1449820 | 0.826131 | 3.210362e-54 | -8.615850e-47 |
| Msa0896750 | Msa1449820 | 0.802681 | 4.999625e-49 | -8.615850e-47 |
| Msa0923330 | Msa1449820 | 0.802590 | 5.219573e-49 | -8.615850e-47 |
| Msa0933230 | Msa1449820 | 0.805859 | 1.089152e-49 | -8.615850e-47 |
| Msa0933310 | Msa1449820 | 0.805819 | 1.110521e-49 | -8.615850e-47 |
| Msa0938220 | Msa1449820 | 0.803801 | 2.931133e-49 | -8.615850e-47 |
| Msa0945970 | Msa1449820 | 0.801298 | 9.618603e-49 | -8.615850e-47 |
| Msa0947660 | Msa1449820 | 0.811698 | 6.146236e-51 | -8.615850e-47 |
| Msa0954130 | Msa1449820 | 0.804671 | 1.931044e-49 | -8.615850e-47 |
| Msa0954530 | Msa1449820 | 0.806135 | 9.526575e-50 | -8.615850e-47 |
| Msa0968590 | Msa1449820 | 0.804104 | 2.535244e-49 | -8.615850e-47 |
| Msa0968680 | Msa1449820 | 0.827938 | 1.186178e-54 | -8.615850e-47 |
| Msa0971090 | Msa1449820 | 0.810952 | 8.923609e-51 | -8.615850e-47 |
| Msa0975340 | Msa1449820 | 0.803132 | 4.034207e-49 | -8.615850e-47 |
| Msa0978250 | Msa1449820 | 0.807830 | 4.173750e-50 | -8.615850e-47 |
| Msa0979100 | Msa1449820 | 0.802723 | 4.900683e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1449820 | MtrunA17_Chr8g0387141 | 98.077 | 52 | 1 | 0 | 18 | 69 | 545 | 596 | 4.21e-31 | 113 |
| Msa1449820 | MtrunA17_Chr8g0387181 | 78.846 | 52 | 11 | 0 | 18 | 69 | 577 | 628 | 2.49e-25 | 96.7 |
| Msa1449820 | MtrunA17_Chr8g0387161 | 71.154 | 52 | 15 | 0 | 18 | 69 | 246 | 297 | 3.46e-21 | 83.6 |
| Msa1449820 | MtrunA17_Chr1g0186281 | 76.087 | 46 | 11 | 0 | 18 | 63 | 534 | 579 | 2.84e-18 | 76.6 |
| Msa1449820 | MtrunA17_Chr1g0186261 | 76.087 | 46 | 11 | 0 | 18 | 63 | 537 | 582 | 4.11e-18 | 76.3 |
| Msa1449820 | MtrunA17_Chr5g0420461 | 75.610 | 41 | 10 | 0 | 29 | 69 | 157 | 197 | 1.93e-17 | 72.0 |
| Msa1449820 | MtrunA17_Chr1g0186191 | 73.913 | 46 | 12 | 0 | 18 | 63 | 544 | 589 | 4.27e-17 | 73.6 |
| Msa1449820 | MtrunA17_Chr6g0479271 | 78.378 | 37 | 8 | 0 | 33 | 69 | 292 | 328 | 1.00e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 12 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATGACGAAGTGGAATT+TGG | 0.312152 | tig0032705:-38442 | Msa1449820:CDS |
| AGCTATCAGGCATCCATCTA+TGG | 0.376521 | tig0032705:-38392 | Msa1449820:CDS |
| GCATCCATCTATGGAATTCA+TGG | 0.384589 | tig0032705:-38383 | Msa1449820:CDS |
| CACTCCATGAATTCCATAGA+TGG | 0.401034 | tig0032705:+38379 | None:intergenic |
| GTTTCGGAAGGAAAGCTATC+AGG | 0.412531 | tig0032705:-38405 | Msa1449820:CDS |
| TTGCCTTCCTTCGAAAGCAT+TGG | 0.437415 | tig0032705:+38555 | None:intergenic |
| TCATCACTGTCAACAGCATT+CGG | 0.478391 | tig0032705:+38460 | None:intergenic |
| CATCCAATGCTTTCGAAGGA+AGG | 0.521611 | tig0032705:-38558 | None:intergenic |
| AATCCATCCAATGCTTTCGA+AGG | 0.574078 | tig0032705:-38562 | None:intergenic |
| AAGGAAGGCAAGAAAAGACT+TGG | 0.584242 | tig0032705:-38543 | Msa1449820:CDS |
| AGGCAAGAAAAGACTTGGTG+AGG | 0.649236 | tig0032705:-38538 | Msa1449820:CDS |
| TGACAGTGATGATGACGAAG+TGG | 0.678639 | tig0032705:-38449 | Msa1449820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAATTTGGATCTTTTGATGA+TGG | - | tig0032705:38470-38489 | Msa1449820:CDS | 30.0% |
| !!! | GGATCTTTTGATGATGGTTT+CGG | - | tig0032705:38476-38495 | Msa1449820:CDS | 35.0% |
| AAGGAAGGCAAGAAAAGACT+TGG | - | tig0032705:38354-38373 | Msa1449820:CDS | 40.0% | |
| TCATCACTGTCAACAGCATT+CGG | + | tig0032705:38440-38459 | None:intergenic | 40.0% | |
| ! | GATGATGACGAAGTGGAATT+TGG | - | tig0032705:38455-38474 | Msa1449820:CDS | 40.0% |
| !!! | CTTTTGATGATGGTTTCGGA+AGG | - | tig0032705:38480-38499 | Msa1449820:CDS | 40.0% |
| GCATCCATCTATGGAATTCA+TGG | - | tig0032705:38514-38533 | Msa1449820:intron | 40.0% | |
| CACTCCATGAATTCCATAGA+TGG | + | tig0032705:38521-38540 | None:intergenic | 40.0% | |
| !! | AGGCAAGAAAAGACTTGGTG+AGG | - | tig0032705:38359-38378 | Msa1449820:CDS | 45.0% |
| ! | TGACAGTGATGATGACGAAG+TGG | - | tig0032705:38448-38467 | Msa1449820:CDS | 45.0% |
| GTTTCGGAAGGAAAGCTATC+AGG | - | tig0032705:38492-38511 | Msa1449820:intron | 45.0% | |
| AGCTATCAGGCATCCATCTA+TGG | - | tig0032705:38505-38524 | Msa1449820:intron | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032705 | gene | 38345 | 38574 | 38345 | ID=Msa1449820;Name=Msa1449820 |
| tig0032705 | mRNA | 38345 | 38574 | 38345 | ID=Msa1449820-mRNA-1;Parent=Msa1449820;Name=Msa1449820-mRNA-1;_AED=0.49;_eAED=0.61;_QI=0|0|0|1|0|0.5|2|0|69 |
| tig0032705 | exon | 38525 | 38574 | 38525 | ID=Msa1449820-mRNA-1:exon:17147;Parent=Msa1449820-mRNA-1 |
| tig0032705 | exon | 38345 | 38504 | 38345 | ID=Msa1449820-mRNA-1:exon:17146;Parent=Msa1449820-mRNA-1 |
| tig0032705 | CDS | 38525 | 38574 | 38525 | ID=Msa1449820-mRNA-1:cds;Parent=Msa1449820-mRNA-1 |
| tig0032705 | CDS | 38345 | 38504 | 38345 | ID=Msa1449820-mRNA-1:cds;Parent=Msa1449820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
