AlfalfaGEDB | Msa0196380

M. sativa cultivar zhongmu-4 / Msa0196380

KEGG: K05350
GO: GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657
PFAM: PF00232.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0196380	AFK42730.1	91.549	142	10	1	18	159	70	209	5.37e-90	271

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0196380	sp\|O80689\|BGL45_ARATH	53.237	139	65	0	14	152	378	516	3.37e-46	160

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0196380	I3SR38	91.549	142	10	1	18	159	70	209	2.57e-90	271

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0030990	Msa0196380	0.800449	1.433806e-48	-8.615850e-47
Msa0036140	Msa0196380	0.840974	6.294700e-58	-8.615850e-47
Msa0051020	Msa0196380	0.818308	2.097399e-52	-8.615850e-47
Msa0061340	Msa0196380	0.840975	6.289822e-58	-8.615850e-47
Msa0077450	Msa0196380	0.800859	1.182878e-48	-8.615850e-47
Msa0084080	Msa0196380	0.828701	7.764768e-55	-8.615850e-47
Msa0095560	Msa0196380	0.814683	1.359914e-51	-8.615850e-47
Msa0100160	Msa0196380	0.802586	5.228322e-49	-8.615850e-47
Msa0101270	Msa0196380	0.813962	1.962233e-51	-8.615850e-47
Msa0138360	Msa0196380	0.805853	1.092269e-49	-8.615850e-47
Msa0141570	Msa0196380	0.809479	1.854543e-50	-8.615850e-47
Msa0144360	Msa0196380	0.807420	5.099500e-50	-8.615850e-47
Msa0145580	Msa0196380	0.823308	1.485122e-53	-8.615850e-47
Msa0152400	Msa0196380	0.839830	1.253055e-57	-8.615850e-47
Msa0170140	Msa0196380	0.810375	1.189106e-50	-8.615850e-47
Msa0196380	Msa0212990	0.824620	7.314537e-54	-8.615850e-47
Msa0196380	Msa0213520	0.816647	4.965885e-52	-8.615850e-47
Msa0196380	Msa0225460	0.801077	1.067537e-48	-8.615850e-47
Msa0196380	Msa0225680	0.809062	2.278283e-50	-8.615850e-47
Msa0196380	Msa0237310	0.803912	2.779179e-49	-8.615850e-47
Msa0196380	Msa0253290	0.819991	8.683691e-53	-8.615850e-47
Msa0196380	Msa0258310	0.807756	4.327889e-50	-8.615850e-47
Msa0196380	Msa0259500	0.819247	1.284090e-52	-8.615850e-47
Msa0196380	Msa0260780	0.805561	1.257787e-49	-8.615850e-47
Msa0196380	Msa0267920	0.805939	1.047495e-49	-8.615850e-47
Msa0196380	Msa0274730	0.803060	4.174598e-49	-8.615850e-47
Msa0196380	Msa0292120	0.816699	4.832604e-52	-8.615850e-47
Msa0196380	Msa0292930	0.804495	2.101519e-49	-8.615850e-47
Msa0196380	Msa0305700	0.822516	2.272136e-53	-8.615850e-47
Msa0196380	Msa0315530	0.802945	4.409075e-49	-8.615850e-47
Msa0196380	Msa0330340	0.813144	2.970540e-51	-8.615850e-47
Msa0196380	Msa0341540	0.824899	6.285842e-54	-8.615850e-47
Msa0196380	Msa0363790	0.811315	7.445013e-51	-8.615850e-47
Msa0196380	Msa0367870	0.812245	4.671730e-51	-8.615850e-47
Msa0196380	Msa0369850	0.801624	8.245572e-49	-8.615850e-47
Msa0196380	Msa0376350	0.819212	1.307434e-52	-8.615850e-47
Msa0196380	Msa0376630	0.812550	4.006512e-51	-8.615850e-47
Msa0196380	Msa0393080	0.802433	5.623011e-49	-8.615850e-47
Msa0196380	Msa0410500	0.807710	4.424394e-50	-8.615850e-47
Msa0196380	Msa0417270	0.800954	1.131231e-48	-8.615850e-47
Msa0196380	Msa0417880	0.808144	3.577864e-50	-8.615850e-47
Msa0196380	Msa0424790	0.810272	1.251698e-50	-8.615850e-47
Msa0196380	Msa0432160	0.800355	1.498317e-48	-8.615850e-47
Msa0196380	Msa0439970	0.802032	6.799264e-49	-8.615850e-47
Msa0196380	Msa0440750	0.807791	4.252949e-50	-8.615850e-47
Msa0196380	Msa0460590	0.813935	1.989759e-51	-8.615850e-47
Msa0196380	Msa0467430	0.821278	4.395980e-53	-8.615850e-47
Msa0196380	Msa0469160	0.815092	1.103725e-51	-8.615850e-47
Msa0196380	Msa0476680	0.800852	1.186809e-48	-8.615850e-47
Msa0196380	Msa0479170	0.813484	2.500524e-51	-8.615850e-47
Msa0196380	Msa0495320	0.820025	8.530675e-53	-8.615850e-47
Msa0196380	Msa0495330	0.807270	5.485280e-50	-8.615850e-47
Msa0196380	Msa0503060	0.806609	7.569399e-50	-8.615850e-47
Msa0196380	Msa0507680	0.800964	1.125783e-48	-8.615850e-47
Msa0196380	Msa0516170	0.813594	2.364655e-51	-8.615850e-47
Msa0196380	Msa0527190	0.815136	1.078820e-51	-8.615850e-47
Msa0196380	Msa0545210	0.810381	1.185700e-50	-8.615850e-47
Msa0196380	Msa0574390	0.801379	9.259049e-49	-8.615850e-47
Msa0196380	Msa0576880	0.823424	1.395937e-53	-8.615850e-47
Msa0196380	Msa0598160	0.810034	1.409044e-50	-8.615850e-47
Msa0196380	Msa0622650	0.807506	4.888312e-50	-8.615850e-47
Msa0196380	Msa0626450	0.800340	1.508715e-48	-8.615850e-47
Msa0196380	Msa0627450	0.803412	3.529256e-49	-8.615850e-47
Msa0196380	Msa0633700	0.815411	9.373010e-52	-8.615850e-47
Msa0196380	Msa0637900	0.804013	2.648409e-49	-8.615850e-47
Msa0196380	Msa0664600	0.804684	1.919639e-49	-8.615850e-47
Msa0196380	Msa0683510	0.808111	3.636993e-50	-8.615850e-47
Msa0196380	Msa0703050	0.827963	1.170444e-54	-8.615850e-47
Msa0196380	Msa0709270	0.809731	1.637031e-50	-8.615850e-47
Msa0196380	Msa0720690	0.838962	2.106004e-57	-8.615850e-47
Msa0196380	Msa0740510	0.822529	2.256823e-53	-8.615850e-47
Msa0196380	Msa0767300	0.827206	1.777755e-54	-8.615850e-47
Msa0196380	Msa0784480	0.826476	2.656985e-54	-8.615850e-47
Msa0196380	Msa0790510	0.808412	3.136724e-50	-8.615850e-47
Msa0196380	Msa0795070	0.806283	8.869663e-50	-8.615850e-47
Msa0196380	Msa0818060	0.815580	8.596236e-52	-8.615850e-47
Msa0196380	Msa0820770	0.820393	7.025085e-53	-8.615850e-47
Msa0196380	Msa0832340	0.843526	1.327330e-58	-8.615850e-47
Msa0196380	Msa0834770	0.802379	5.768460e-49	-8.615850e-47
Msa0196380	Msa0844240	0.802270	6.074478e-49	-8.615850e-47
Msa0196380	Msa0861090	0.823657	1.231175e-53	-8.615850e-47
Msa0196380	Msa0861540	0.816239	6.125460e-52	-8.615850e-47
Msa0196380	Msa0875290	0.807386	5.184680e-50	-8.615850e-47
Msa0196380	Msa0900620	0.804690	1.914321e-49	-8.615850e-47
Msa0196380	Msa0926470	0.818730	1.682965e-52	-8.615850e-47
Msa0196380	Msa0969520	0.822071	2.882170e-53	-8.615850e-47
Msa0196380	Msa0986510	0.806945	6.428073e-50	-8.615850e-47
Msa0196380	Msa1034500	0.821818	3.297987e-53	-8.615850e-47
Msa0196380	Msa1041670	0.827402	1.595873e-54	-8.615850e-47
Msa0196380	Msa1050910	0.802746	4.847798e-49	-8.615850e-47
Msa0196380	Msa1059960	0.836100	1.140677e-56	-8.615850e-47
Msa0196380	Msa1084950	0.800331	1.515080e-48	-8.615850e-47
Msa0196380	Msa1102770	0.804392	2.208327e-49	-8.615850e-47
Msa0196380	Msa1105160	0.828109	1.078924e-54	-8.615850e-47
Msa0196380	Msa1166560	0.819995	8.666104e-53	-8.615850e-47
Msa0196380	Msa1179940	0.816788	4.615174e-52	-8.615850e-47
Msa0196380	Msa1179970	0.808292	3.328052e-50	-8.615850e-47
Msa0196380	Msa1188710	0.818582	1.818417e-52	-8.615850e-47
Msa0196380	Msa1199570	0.845379	4.212996e-59	-8.615850e-47
Msa0196380	Msa1226460	0.808806	2.584418e-50	-8.615850e-47
Msa0196380	Msa1250530	0.804266	2.345683e-49	-8.615850e-47
Msa0196380	Msa1276660	0.806310	8.751775e-50	-8.615850e-47
Msa0196380	Msa1297290	0.812427	4.262783e-51	-8.615850e-47
Msa0196380	Msa1328640	0.841173	5.579310e-58	-8.615850e-47
Msa0196380	Msa1328710	0.840187	1.011547e-57	-8.615850e-47
Msa0196380	Msa1331000	0.807289	5.435843e-50	-8.615850e-47
Msa0196380	Msa1353470	0.801124	1.043850e-48	-8.615850e-47
Msa0196380	Msa1353980	0.807501	4.902119e-50	-8.615850e-47
Msa0196380	Msa1355450	0.803403	3.544777e-49	-8.615850e-47
Msa0196380	Msa1360440	0.803035	4.223471e-49	-8.615850e-47
Msa0196380	Msa1368430	0.805890	1.072981e-49	-8.615850e-47
Msa0196380	Msa1371520	0.809677	1.681318e-50	-8.615850e-47
Msa0196380	Msa1372760	0.801957	7.045066e-49	-8.615850e-47
Msa0196380	Msa1374040	0.803544	3.313901e-49	-8.615850e-47
Msa0196380	Msa1382400	0.824669	7.121457e-54	-8.615850e-47
Msa0196380	Msa1385000	0.813643	2.306969e-51	-8.615850e-47
Msa0196380	Msa1402400	0.810105	1.360153e-50	-8.615850e-47
Msa0196380	Msa1429680	0.802695	4.965944e-49	-8.615850e-47
Msa0196380	Msa1435270	0.808658	2.779935e-50	-8.615850e-47
Msa0196380	Msa1439610	0.800197	1.613839e-48	-8.615850e-47
Msa0196380	Msa1443850	0.810604	1.061473e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0196380	MtrunA17_Chr2g0288021	91.549	142	10	1	18	159	382	521	1.14e-89	270
Msa0196380	MtrunA17_Chr4g0074561	60.448	134	53	0	15	148	382	515	1.58e-54	179
Msa0196380	MtrunA17_Chr2g0288071	62.963	135	50	0	13	147	410	544	1.66e-53	177
Msa0196380	MtrunA17_Chr4g0074551	55.797	138	61	0	10	147	389	526	3.25e-48	163
Msa0196380	MtrunA17_Chr2g0317821	48.571	140	72	0	5	144	365	504	5.85e-41	143
Msa0196380	MtrunA17_Chr2g0317841	47.857	140	73	0	5	144	365	504	1.20e-40	142
Msa0196380	MtrunA17_Chr4g0042171	44.531	128	69	2	18	143	371	498	1.40e-32	120
Msa0196380	MtrunA17_Chr4g0043091	42.361	144	76	2	5	147	368	505	2.00e-32	120
Msa0196380	MtrunA17_Chr4g0006111	41.985	131	75	1	19	148	398	528	3.52e-31	117
Msa0196380	MtrunA17_Chr4g0033311	44.361	133	73	1	18	149	387	519	3.55e-31	117
Msa0196380	MtrunA17_Chr3g0087271	40.278	144	85	1	6	148	370	513	4.77e-31	116
Msa0196380	MtrunA17_Chr3g0090111	42.222	135	76	2	18	151	354	487	7.75e-31	115
Msa0196380	MtrunA17_Chr2g0301231	42.276	123	70	1	24	145	270	392	2.98e-30	113
Msa0196380	MtrunA17_Chr5g0430451	39.583	144	84	3	4	145	356	498	7.18e-30	113
Msa0196380	MtrunA17_Chr3g0090131	42.963	135	75	2	18	151	357	490	8.50e-30	112
Msa0196380	MtrunA17_Chr4g0006131	41.481	135	76	2	19	151	373	506	1.12e-29	112
Msa0196380	MtrunA17_Chr3g0087261	40.559	143	82	3	8	148	371	512	1.44e-29	112
Msa0196380	MtrunA17_Chr6g0482081	43.704	135	72	4	18	150	385	517	2.19e-28	109
Msa0196380	MtrunA17_Chr2g0329191	40.741	135	79	1	13	146	376	510	2.23e-28	109
Msa0196380	MtrunA17_Chr4g0033271	41.860	129	74	1	18	145	383	511	2.75e-28	108
Msa0196380	MtrunA17_Chr4g0033201	42.636	129	73	1	18	145	384	512	3.44e-28	108
Msa0196380	MtrunA17_Chr3g0088441	41.791	134	75	3	18	149	386	518	3.88e-28	108
Msa0196380	MtrunA17_Chr6g0482071	39.695	131	78	1	18	147	385	515	1.14e-27	107
Msa0196380	MtrunA17_Chr4g0033191	41.860	129	74	1	18	145	391	519	1.78e-27	106
Msa0196380	MtrunA17_Chr6g0482951	43.548	124	68	1	24	147	393	514	1.90e-27	106
Msa0196380	MtrunA17_Chr6g0482131	40.625	128	75	1	18	144	384	511	2.36e-27	106
Msa0196380	MtrunA17_Chr6g0482941	43.089	123	68	1	25	147	394	514	3.84e-27	105
Msa0196380	MtrunA17_Chr4g0033331	40.625	128	75	1	18	144	387	514	9.13e-27	104
Msa0196380	MtrunA17_Chr2g0329321	38.760	129	78	1	18	145	360	488	9.37e-27	104
Msa0196380	MtrunA17_Chr4g0010501	38.849	139	80	2	8	145	360	494	1.03e-26	104
Msa0196380	MtrunA17_Chr4g0033401	40.625	128	75	1	18	144	382	509	3.25e-26	103
Msa0196380	MtrunA17_Chr4g0033321	40.625	128	75	1	18	144	381	508	3.95e-26	102
Msa0196380	MtrunA17_Chr2g0329201	36.806	144	90	1	4	146	365	508	1.04e-25	101
Msa0196380	MtrunA17_Chr3g0087201	34.266	143	89	2	4	145	206	344	1.16e-25	100
Msa0196380	MtrunA17_Chr4g0033261	39.535	129	77	1	18	145	365	493	1.33e-25	101
Msa0196380	MtrunA17_Chr4g0033231	38.462	130	79	1	18	146	365	494	1.83e-25	100
Msa0196380	MtrunA17_Chr4g0033341	38.462	130	79	1	18	146	415	544	2.41e-24	98.2
Msa0196380	MtrunA17_Chr7g0242691	37.795	127	71	2	20	144	374	494	3.36e-24	97.4
Msa0196380	MtrunA17_Chr7g0234091	37.815	119	68	2	27	144	419	532	3.70e-23	94.7
Msa0196380	MtrunA17_Chr7g0242681	42.478	113	56	3	33	143	394	499	4.85e-22	91.3
Msa0196380	MtrunA17_Chr4g0006971	41.228	114	59	2	33	144	383	490	6.50e-22	90.9
Msa0196380	MtrunA17_Chr7g0234111	34.228	149	86	4	2	144	390	532	2.59e-21	89.4
Msa0196380	MtrunA17_Chr5g0418861	50.649	77	36	2	70	144	15	91	2.05e-20	80.5
Msa0196380	MtrunA17_Chr7g0234131	33.613	119	73	2	27	144	420	533	4.86e-19	82.8
Msa0196380	MtrunA17_Chr1g0195611	36.522	115	65	2	32	144	380	488	4.37e-17	77.4
Msa0196380	MtrunA17_Chr5g0428831	36.207	116	65	3	32	144	380	489	2.64e-15	72.0
Msa0196380	MtrunA17_Chr7g0227591	50.943	53	25	1	93	144	14	66	3.21e-12	58.5
Msa0196380	MtrunA17_Chr4g0068871	32.520	123	69	3	28	147	425	536	4.09e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0196380	AT1G61810.5	53.237	139	65	0	14	152	278	416	7.35e-48	160
Msa0196380	AT4G21760.2	54.225	142	60	1	9	150	392	528	1.05e-47	162
Msa0196380	AT1G61820.3	52.941	136	64	0	14	149	236	371	1.87e-47	158
Msa0196380	AT1G61810.1	53.237	139	65	0	14	152	378	516	3.43e-47	160
Msa0196380	AT1G61820.1	52.941	136	64	0	14	149	375	510	2.32e-46	158
Msa0196380	AT4G21760.1	57.143	119	46	1	32	150	405	518	9.15e-42	146
Msa0196380	AT1G61810.3	52.542	118	56	0	14	131	378	495	6.96e-38	135
Msa0196380	AT5G24540.1	48.000	125	61	3	21	143	387	509	1.29e-31	118
Msa0196380	AT3G60140.1	40.769	130	75	2	18	145	375	504	9.57e-31	116
Msa0196380	AT5G54570.2	45.082	122	65	2	24	143	287	408	1.51e-30	114
Msa0196380	AT5G54570.1	45.082	122	65	2	24	143	384	505	2.95e-30	114
Msa0196380	AT5G24550.1	43.704	135	71	4	13	144	378	510	5.08e-30	114
Msa0196380	AT1G26560.1	42.958	142	73	3	5	144	372	507	5.83e-30	114
Msa0196380	AT5G36890.1	42.188	128	73	1	18	144	353	480	1.10e-29	112
Msa0196380	AT5G36890.2	42.188	128	73	1	18	144	353	480	1.17e-29	112
Msa0196380	AT2G44460.2	46.610	118	61	2	29	144	242	359	1.31e-29	112
Msa0196380	AT2G44460.1	47.009	117	60	2	29	143	388	504	3.22e-29	112
Msa0196380	AT2G44450.2	37.956	137	80	2	13	148	222	354	8.72e-28	106
Msa0196380	AT2G44480.5	36.842	133	83	1	13	144	171	303	9.37e-28	105
Msa0196380	AT2G44490.1	43.089	123	66	4	25	143	370	492	2.66e-27	106
Msa0196380	AT2G44480.2	36.842	133	83	1	13	144	275	407	4.39e-27	105
Msa0196380	AT2G44450.1	37.956	137	80	2	13	148	373	505	5.37e-27	105
Msa0196380	AT2G44470.3	41.538	130	73	3	17	144	378	506	7.11e-27	105
Msa0196380	AT2G44480.3	37.405	131	81	1	15	144	410	540	8.78e-27	105
Msa0196380	AT2G44480.1	37.405	131	81	1	15	144	379	509	8.92e-27	105
Msa0196380	AT5G44640.1	38.971	136	78	3	13	147	374	505	3.16e-26	103
Msa0196380	AT4G27820.2	39.669	121	65	2	32	150	290	404	5.45e-26	102
Msa0196380	AT4G27820.3	39.669	121	65	2	32	150	290	404	5.45e-26	102
Msa0196380	AT3G18070.7	41.129	124	71	2	25	148	191	312	7.00e-26	100
Msa0196380	AT4G27820.1	39.669	121	65	2	32	150	375	489	1.05e-25	102
Msa0196380	AT3G18070.2	41.129	124	71	1	25	148	303	424	2.43e-25	100
Msa0196380	AT5G25980.2	41.803	122	67	3	27	145	404	524	3.01e-25	100
Msa0196380	AT3G18070.1	41.129	124	71	2	25	148	380	501	3.64e-25	100
Msa0196380	AT3G18070.3	41.129	124	71	2	25	148	374	495	3.69e-25	100
Msa0196380	AT1G02850.5	42.188	128	65	3	19	143	387	508	7.11e-25	99.8
Msa0196380	AT1G02850.1	42.188	128	65	3	19	143	337	458	8.10e-25	99.4
Msa0196380	AT1G02850.2	42.188	128	65	3	19	143	364	485	8.47e-25	99.4
Msa0196380	AT3G18080.1	41.463	123	70	1	24	146	390	510	1.29e-24	99.0
Msa0196380	AT4G27830.2	38.843	121	66	2	32	150	289	403	1.64e-24	98.2
Msa0196380	AT4G27830.1	38.843	121	66	2	32	150	377	491	3.12e-24	97.8
Msa0196380	AT3G62750.6	40.496	121	64	2	32	150	281	395	5.22e-24	96.7
Msa0196380	AT3G62750.5	40.496	121	64	2	32	150	281	395	5.22e-24	96.7
Msa0196380	AT3G60120.1	39.394	132	74	3	15	144	363	490	8.52e-24	96.7
Msa0196380	AT3G62750.1	38.760	129	71	2	32	158	366	488	9.34e-24	96.7
Msa0196380	AT3G62750.2	38.760	129	71	2	32	158	392	514	1.05e-23	96.7
Msa0196380	AT5G42260.1	38.281	128	74	3	13	139	374	497	1.84e-23	95.9
Msa0196380	AT1G02850.4	41.860	129	65	4	19	143	387	509	3.22e-23	95.1
Msa0196380	AT1G60090.2	39.474	114	63	2	32	143	373	482	2.13e-22	92.8
Msa0196380	AT1G45191.4	38.095	126	72	2	28	151	370	491	2.29e-22	92.8
Msa0196380	AT4G22100.1	36.885	122	71	2	32	151	373	490	2.99e-22	92.4
Msa0196380	AT3G60130.2	37.190	121	71	2	25	144	333	449	3.75e-22	92.0
Msa0196380	AT3G60130.1	37.190	121	71	2	25	144	385	501	4.62e-22	92.0
Msa0196380	AT3G21370.1	38.060	134	80	3	14	144	379	512	1.23e-21	90.5
Msa0196380	AT1G75940.1	42.149	121	67	3	28	145	399	519	2.51e-21	89.7
Msa0196380	AT1G66280.1	40.000	130	76	2	18	145	383	512	2.80e-21	89.7
Msa0196380	AT1G60090.1	38.333	120	66	3	32	143	370	489	3.37e-21	89.4
Msa0196380	AT3G09260.1	40.000	130	76	2	18	145	383	512	4.56e-21	89.0
Msa0196380	AT1G45191.1	37.815	119	68	2	35	151	400	514	6.58e-21	88.6
Msa0196380	AT1G45191.2	37.815	119	68	2	35	151	383	497	6.67e-21	88.6
Msa0196380	AT1G45191.6	37.815	119	68	2	35	151	388	502	7.27e-21	88.6
Msa0196380	AT1G66270.1	40.833	120	69	2	28	145	393	512	1.51e-20	87.4
Msa0196380	AT5G28510.1	38.281	128	77	2	28	153	402	529	1.55e-20	87.4
Msa0196380	AT1G66270.2	40.833	120	69	2	28	145	391	510	1.72e-20	87.4
Msa0196380	AT3G60130.3	37.288	118	69	2	28	144	325	438	4.83e-20	85.9
Msa0196380	AT3G62740.1	33.824	136	82	2	17	150	356	485	1.24e-19	85.1
Msa0196380	AT2G32860.1	33.582	134	86	3	28	158	453	586	1.95e-19	84.3
Msa0196380	AT2G32860.2	33.582	134	86	3	28	158	454	587	2.10e-19	84.3
Msa0196380	AT1G47600.2	34.711	121	78	1	26	145	390	510	2.41e-19	84.0
Msa0196380	AT1G47600.1	34.711	121	78	1	26	145	391	511	2.43e-19	84.0
Msa0196380	AT1G51470.1	34.711	121	78	1	26	145	391	511	2.68e-19	84.0
Msa0196380	AT1G52400.3	37.209	129	78	3	28	153	397	525	2.78e-19	84.0
Msa0196380	AT1G52400.1	37.209	129	78	3	28	153	397	525	2.78e-19	84.0
Msa0196380	AT2G25630.1	36.752	117	69	2	32	147	375	487	3.25e-19	83.6
Msa0196380	AT5G26000.1	37.190	121	71	3	27	144	394	512	3.48e-19	83.6
Msa0196380	AT3G03640.1	31.111	135	91	2	13	145	380	514	9.26e-15	70.9
Msa0196380	AT5G16580.1	41.429	70	37	1	32	101	234	299	2.73e-12	63.5
Msa0196380	AT3G06510.1	32.520	123	69	3	28	147	402	513	1.68e-11	61.6
Msa0196380	AT3G06510.2	32.520	123	69	3	28	147	436	547	1.76e-11	61.6

Find 31 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCAATGTTCATTACGGAAAA+TGG	0.173704	2_1:+13559333	Msa0196380:CDS
CACCAAGAGGATCAGCATTT+TGG	0.235805	2_1:+13560080	Msa0196380:CDS
ATTTGTCTTGCATAGGATTT+GGG	0.318772	2_1:+13559420	Msa0196380:intron
ATCTGGCAGGCATTAGGTTT+GGG	0.360792	2_1:+13560131	Msa0196380:CDS
AATCTGGCAGGCATTAGGTT+TGG	0.396239	2_1:+13560130	Msa0196380:CDS
CAACATTCCAATGTTCATTA+CGG	0.398744	2_1:+13559326	Msa0196380:CDS
AAAATGGGTTGCTCATTCTC+TGG	0.404583	2_1:+13558272	None:intergenic
GGAATCATGGATACAGTATA+AGG	0.411116	2_1:+13560017	Msa0196380:CDS
ATTCTCTAGCAACAGCAATA+AGG	0.425025	2_1:+13559522	Msa0196380:CDS
CCTTGTAGACTGCGCTTGCT+TGG	0.429862	2_1:+13559244	Msa0196380:intron
GGAGTACTTGAGTAGTTACT+TGG	0.435039	2_1:+13559499	Msa0196380:CDS
CATGGATACAGTATAAGGTT+TGG	0.447543	2_1:+13560022	Msa0196380:CDS
AAATATAGTGACTTACATAA+AGG	0.452496	2_1:+13559293	Msa0196380:CDS
TTCAATTCATATTCACTGAT+GGG	0.469277	2_1:-13559461	None:intergenic
TTATGTTCACTCACAAGGAA+TGG	0.492801	2_1:+13559269	Msa0196380:CDS
GTTCAATTCATATTCACTGA+TGG	0.498419	2_1:-13559462	None:intergenic
TACCAAAATGCTGATCCTCT+TGG	0.518101	2_1:-13560082	None:intergenic
AGAAAAGGAGCAGATGTGAG+AGG	0.530462	2_1:+13559959	Msa0196380:intron
CACGATATATGCAAGGTTCG+AGG	0.532680	2_1:-13560348	None:intergenic
TACGATTCAGTGAACGGTGG+TGG	0.539518	2_1:+13558308	Msa0196380:CDS
TCTTGGTGTTCTATTGAGAG+TGG	0.567832	2_1:-13560065	None:intergenic
GCATTATACGATTCAGTGAA+CGG	0.576431	2_1:+13558302	Msa0196380:CDS
GAAAAGGAGCAGATGTGAGA+GGG	0.584177	2_1:+13559960	Msa0196380:intron
TCAATTCATATTCACTGATG+GGG	0.599048	2_1:-13559460	None:intergenic
TAGTGACTTACATAAAGGAC+AGG	0.599534	2_1:+13559298	Msa0196380:CDS
ATGTGAGAGGGTACTTTGTG+TGG	0.605684	2_1:+13559972	Msa0196380:CDS
ATTGAACGATGTCAAAAGAG+TGG	0.608062	2_1:+13559478	Msa0196380:CDS
ACTAAAACACGATATATGCA+AGG	0.639674	2_1:-13560355	None:intergenic
AAGGTTTGGACTTCATCATG+TGG	0.652976	2_1:+13560036	Msa0196380:CDS
ACTCTCAATAGAACACCAAG+AGG	0.680197	2_1:+13560067	Msa0196380:CDS
TTATACGATTCAGTGAACGG+TGG	0.786732	2_1:+13558305	Msa0196380:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGAATTACAAAAAATAAAAA+AGG	-	chr2_1:13558515-13558534	None:intergenic	10.0%
!!	GAATTTAAAAAGAATTAAAA+AGG	-	chr2_1:13558570-13558589	None:intergenic	10.0%
!!	AAATAAAACAACATATTTAA+GGG	-	chr2_1:13559404-13559423	None:intergenic	10.0%
!!	ATAATATCATCTTATAAATA+AGG	-	chr2_1:13559674-13559693	None:intergenic	10.0%
!!	TTATTTATAAGATGATATTA+TGG	+	chr2_1:13559673-13559692	Msa0196380:intron	10.0%
!!	TGAATTACAAAAAATAAAAA+AGG	-	chr2_1:13558515-13558534	None:intergenic	10.0%
!!	GAATTTAAAAAGAATTAAAA+AGG	-	chr2_1:13558570-13558589	None:intergenic	10.0%
!!	AAATAAAACAACATATTTAA+GGG	-	chr2_1:13559404-13559423	None:intergenic	10.0%
!!	ATAATATCATCTTATAAATA+AGG	-	chr2_1:13559674-13559693	None:intergenic	10.0%
!!	TTATTTATAAGATGATATTA+TGG	+	chr2_1:13559673-13559692	Msa0196380:intron	10.0%
!!	TATTCAACTATGTTTAAATA+AGG	+	chr2_1:13558806-13558825	Msa0196380:intron	15.0%
!!	TTTAGAAAATAGTATCAAAT+TGG	-	chr2_1:13558964-13558983	None:intergenic	15.0%
!!!	TTGTTTTTAATTTTGTATTG+TGG	+	chr2_1:13558986-13559005	Msa0196380:intron	15.0%
!!!	TGTTTTTAATTTTGTATTGT+GGG	+	chr2_1:13558987-13559006	Msa0196380:intron	15.0%
!!	CAAATAAAACAACATATTTA+AGG	-	chr2_1:13559405-13559424	None:intergenic	15.0%
!!!	CCATTATTTTCTAATATTAA+GGG	-	chr2_1:13559773-13559792	None:intergenic	15.0%
!!!	ACCATTATTTTCTAATATTA+AGG	-	chr2_1:13559774-13559793	None:intergenic	15.0%
!!	TATTCAACTATGTTTAAATA+AGG	+	chr2_1:13558806-13558825	Msa0196380:intron	15.0%
!!	TTTAGAAAATAGTATCAAAT+TGG	-	chr2_1:13558964-13558983	None:intergenic	15.0%
!!!	TTGTTTTTAATTTTGTATTG+TGG	+	chr2_1:13558986-13559005	Msa0196380:intron	15.0%
!!!	TGTTTTTAATTTTGTATTGT+GGG	+	chr2_1:13558987-13559006	Msa0196380:intron	15.0%
!!	CAAATAAAACAACATATTTA+AGG	-	chr2_1:13559405-13559424	None:intergenic	15.0%
!!!	CCATTATTTTCTAATATTAA+GGG	-	chr2_1:13559773-13559792	None:intergenic	15.0%
!!!	ACCATTATTTTCTAATATTA+AGG	-	chr2_1:13559774-13559793	None:intergenic	15.0%
!!!	ACCTTTGAAATTAAAATCAA+TGG	+	chr2_1:13558391-13558410	Msa0196380:intron	20.0%
!!!	TCCATTGATTTTAATTTCAA+AGG	-	chr2_1:13558395-13558414	None:intergenic	20.0%
!!	TAAAAAAGGAAAGAAAGAAA+AGG	-	chr2_1:13558501-13558520	None:intergenic	20.0%
!!	GTAATTCATCAATAAACAAT+TGG	+	chr2_1:13558527-13558546	Msa0196380:intron	20.0%
!!!	GAAAGTGGTTTTTTTTAATA+GGG	+	chr2_1:13558724-13558743	Msa0196380:intron	20.0%
!!!	AAAGTGGTTTTTTTTAATAG+GGG	+	chr2_1:13558725-13558744	Msa0196380:intron	20.0%
!!	CAAATGTAGAAATAATGTAT+TGG	-	chr2_1:13559147-13559166	None:intergenic	20.0%
!!!	CAATACATTATTTCTACATT+TGG	+	chr2_1:13559145-13559164	Msa0196380:intron	20.0%
!!	ATAATTATGGGAAATGTTAT+GGG	-	chr2_1:13559209-13559228	None:intergenic	20.0%
!!	TATAATTATGGGAAATGTTA+TGG	-	chr2_1:13559210-13559229	None:intergenic	20.0%
!!	TAACATTTCCCATAATTATA+AGG	+	chr2_1:13559210-13559229	Msa0196380:intron	20.0%
!!	ATTTGACACCTTATAATTAT+GGG	-	chr2_1:13559221-13559240	None:intergenic	20.0%
!!	TATTTGACACCTTATAATTA+TGG	-	chr2_1:13559222-13559241	None:intergenic	20.0%
!!	AAATATAGTGACTTACATAA+AGG	+	chr2_1:13559293-13559312	Msa0196380:CDS	20.0%
!!	TATCATCTTATAAATAAGGA+AGG	-	chr2_1:13559670-13559689	None:intergenic	20.0%
!!!	TTTTTTGTCAATTAGTCTAA+TGG	-	chr2_1:13559699-13559718	None:intergenic	20.0%
!!	ATTGACAAAAAATAGAAAAG+AGG	+	chr2_1:13559707-13559726	Msa0196380:intron	20.0%
!!	CCCTTAATATTAGAAAATAA+TGG	+	chr2_1:13559770-13559789	Msa0196380:intron	20.0%
!!	TAACAACATAAAGTTACAAA+TGG	-	chr2_1:13559825-13559844	None:intergenic	20.0%
!!	ATTTGTAACTTTATGTTGTT+AGG	+	chr2_1:13559824-13559843	Msa0196380:intron	20.0%
!!!	ACCTTTGAAATTAAAATCAA+TGG	+	chr2_1:13558391-13558410	Msa0196380:intron	20.0%
!!!	TCCATTGATTTTAATTTCAA+AGG	-	chr2_1:13558395-13558414	None:intergenic	20.0%
!!	TAAAAAAGGAAAGAAAGAAA+AGG	-	chr2_1:13558501-13558520	None:intergenic	20.0%
!!	GTAATTCATCAATAAACAAT+TGG	+	chr2_1:13558527-13558546	Msa0196380:intron	20.0%
!!!	GAAAGTGGTTTTTTTTAATA+GGG	+	chr2_1:13558724-13558743	Msa0196380:intron	20.0%
!!!	AAAGTGGTTTTTTTTAATAG+GGG	+	chr2_1:13558725-13558744	Msa0196380:intron	20.0%
!!	CAAATGTAGAAATAATGTAT+TGG	-	chr2_1:13559147-13559166	None:intergenic	20.0%
!!!	CAATACATTATTTCTACATT+TGG	+	chr2_1:13559145-13559164	Msa0196380:intron	20.0%
!!	ATAATTATGGGAAATGTTAT+GGG	-	chr2_1:13559209-13559228	None:intergenic	20.0%
!!	TATAATTATGGGAAATGTTA+TGG	-	chr2_1:13559210-13559229	None:intergenic	20.0%
!!	TAACATTTCCCATAATTATA+AGG	+	chr2_1:13559210-13559229	Msa0196380:intron	20.0%
!!	ATTTGACACCTTATAATTAT+GGG	-	chr2_1:13559221-13559240	None:intergenic	20.0%
!!	TATTTGACACCTTATAATTA+TGG	-	chr2_1:13559222-13559241	None:intergenic	20.0%
!!	AAATATAGTGACTTACATAA+AGG	+	chr2_1:13559293-13559312	Msa0196380:CDS	20.0%
!!	TATCATCTTATAAATAAGGA+AGG	-	chr2_1:13559670-13559689	None:intergenic	20.0%
!!!	TTTTTTGTCAATTAGTCTAA+TGG	-	chr2_1:13559699-13559718	None:intergenic	20.0%
!!	ATTGACAAAAAATAGAAAAG+AGG	+	chr2_1:13559707-13559726	Msa0196380:intron	20.0%
!!	CCCTTAATATTAGAAAATAA+TGG	+	chr2_1:13559770-13559789	Msa0196380:intron	20.0%
!!	TAACAACATAAAGTTACAAA+TGG	-	chr2_1:13559825-13559844	None:intergenic	20.0%
!!	ATTTGTAACTTTATGTTGTT+AGG	+	chr2_1:13559824-13559843	Msa0196380:intron	20.0%
!	TTAATTAATTAAATGCCACG+TGG	+	chr2_1:13558614-13558633	Msa0196380:intron	25.0%
!!!	GGAAAGTGGTTTTTTTTAAT+AGG	+	chr2_1:13558723-13558742	Msa0196380:intron	25.0%
!!!	AAGTGGTTTTTTTTAATAGG+GGG	+	chr2_1:13558726-13558745	Msa0196380:intron	25.0%
!	AACATAGTTGAATAGATTGA+AGG	-	chr2_1:13558800-13558819	None:intergenic	25.0%
!!	TGTGGGTTACATATAATTAA+TGG	+	chr2_1:13559004-13559023	Msa0196380:intron	25.0%
!!	GTGGGTTACATATAATTAAT+GGG	+	chr2_1:13559005-13559024	Msa0196380:intron	25.0%
!	ATTGAATGCACAAAGTTTAA+GGG	-	chr2_1:13559086-13559105	None:intergenic	25.0%
!	AATTGAATGCACAAAGTTTA+AGG	-	chr2_1:13559087-13559106	None:intergenic	25.0%
!	CAAATAAAACAACAAATCTG+AGG	-	chr2_1:13559373-13559392	None:intergenic	25.0%
!!!	TTGTTTTATTTGTCTTGCAT+AGG	+	chr2_1:13559413-13559432	Msa0196380:intron	25.0%
!	TTCAATTCATATTCACTGAT+GGG	-	chr2_1:13559464-13559483	None:intergenic	25.0%
!!!	TCTTTTTTCTAGTAATGGAT+AGG	-	chr2_1:13559558-13559577	None:intergenic	25.0%
!	TATCCATTACTAGAAAAAAG+AGG	+	chr2_1:13559557-13559576	Msa0196380:intron	25.0%
!	AACATAAAGTTACAAATGGA+AGG	-	chr2_1:13559821-13559840	None:intergenic	25.0%
!	TTTGCTAAGAAATCTAAGTT+GGG	-	chr2_1:13559872-13559891	None:intergenic	25.0%
!!!	GTTACTTTTATGTACAGAAA+AGG	+	chr2_1:13559944-13559963	Msa0196380:intron	25.0%
!	TCAAAGAAGAAAAAAGTCTT+TGG	+	chr2_1:13560194-13560213	Msa0196380:three_prime_UTR	25.0%
!!	CTTTTATCAAGCACATATAT+TGG	-	chr2_1:13560222-13560241	None:intergenic	25.0%
!!!	GTGTTTTAGTATGTCTTTTT+TGG	+	chr2_1:13560307-13560326	Msa0196380:three_prime_UTR	25.0%
!!!	TTTTAGTATGTCTTTTTTGG+TGG	+	chr2_1:13560310-13560329	Msa0196380:three_prime_UTR	25.0%
!	TTAATTAATTAAATGCCACG+TGG	+	chr2_1:13558614-13558633	Msa0196380:intron	25.0%
!!!	GGAAAGTGGTTTTTTTTAAT+AGG	+	chr2_1:13558723-13558742	Msa0196380:intron	25.0%
!!!	AAGTGGTTTTTTTTAATAGG+GGG	+	chr2_1:13558726-13558745	Msa0196380:intron	25.0%
!	AACATAGTTGAATAGATTGA+AGG	-	chr2_1:13558800-13558819	None:intergenic	25.0%
!!	TGTGGGTTACATATAATTAA+TGG	+	chr2_1:13559004-13559023	Msa0196380:intron	25.0%
!!	GTGGGTTACATATAATTAAT+GGG	+	chr2_1:13559005-13559024	Msa0196380:intron	25.0%
!	ATTGAATGCACAAAGTTTAA+GGG	-	chr2_1:13559086-13559105	None:intergenic	25.0%
!	AATTGAATGCACAAAGTTTA+AGG	-	chr2_1:13559087-13559106	None:intergenic	25.0%
!	CAAATAAAACAACAAATCTG+AGG	-	chr2_1:13559373-13559392	None:intergenic	25.0%
!!!	TTGTTTTATTTGTCTTGCAT+AGG	+	chr2_1:13559413-13559432	Msa0196380:intron	25.0%
!	TTCAATTCATATTCACTGAT+GGG	-	chr2_1:13559464-13559483	None:intergenic	25.0%
!!!	TCTTTTTTCTAGTAATGGAT+AGG	-	chr2_1:13559558-13559577	None:intergenic	25.0%
!	TATCCATTACTAGAAAAAAG+AGG	+	chr2_1:13559557-13559576	Msa0196380:intron	25.0%
!	AACATAAAGTTACAAATGGA+AGG	-	chr2_1:13559821-13559840	None:intergenic	25.0%
!	TTTGCTAAGAAATCTAAGTT+GGG	-	chr2_1:13559872-13559891	None:intergenic	25.0%
!!!	GTTACTTTTATGTACAGAAA+AGG	+	chr2_1:13559944-13559963	Msa0196380:intron	25.0%
!	TCAAAGAAGAAAAAAGTCTT+TGG	+	chr2_1:13560194-13560213	Msa0196380:three_prime_UTR	25.0%
!!	CTTTTATCAAGCACATATAT+TGG	-	chr2_1:13560222-13560241	None:intergenic	25.0%
!!!	GTGTTTTAGTATGTCTTTTT+TGG	+	chr2_1:13560307-13560326	Msa0196380:three_prime_UTR	25.0%
!!!	TTTTAGTATGTCTTTTTTGG+TGG	+	chr2_1:13560310-13560329	Msa0196380:three_prime_UTR	25.0%
	GAATTCATCAAACTACAACT+CGG	+	chr2_1:13558419-13558438	Msa0196380:intron	30.0%
	AATTCATCAAACTACAACTC+GGG	+	chr2_1:13558420-13558439	Msa0196380:intron	30.0%
	AAACCTGATGAATTCATCAA+TGG	+	chr2_1:13558462-13558481	Msa0196380:intron	30.0%
	TTGACCAAGTCAAAATCAAA+TGG	+	chr2_1:13558662-13558681	Msa0196380:intron	30.0%
	TGACCAAGTCAAAATCAAAT+GGG	+	chr2_1:13558663-13558682	Msa0196380:intron	30.0%
!	TGAAGGCTAAAATACACTTT+TGG	-	chr2_1:13558783-13558802	None:intergenic	30.0%
!	TTGAACGTATTTGGTTCAAT+TGG	-	chr2_1:13558860-13558879	None:intergenic	30.0%
!!	TTGAACTTGTTGAACGTATT+TGG	-	chr2_1:13558869-13558888	None:intergenic	30.0%
!!	TGGTCAATTTCAAGTTCAAA+TGG	+	chr2_1:13558929-13558948	Msa0196380:intron	30.0%
	GAAAATAGTATCAAATTGGC+CGG	-	chr2_1:13558960-13558979	None:intergenic	30.0%
!	ATTTTTAACATGTGCCCTAA+GGG	-	chr2_1:13559046-13559065	None:intergenic	30.0%
	TTTCTAAACTTGTGCCTTAA+GGG	+	chr2_1:13559168-13559187	Msa0196380:intron	30.0%
	CAACATTCCAATGTTCATTA+CGG	+	chr2_1:13559326-13559345	Msa0196380:CDS	30.0%
	TATTTGTCTTGCATAGGATT+TGG	+	chr2_1:13559419-13559438	Msa0196380:intron	30.0%
	ATTTGTCTTGCATAGGATTT+GGG	+	chr2_1:13559420-13559439	Msa0196380:intron	30.0%
	TCAATTCATATTCACTGATG+GGG	-	chr2_1:13559463-13559482	None:intergenic	30.0%
	GTTCAATTCATATTCACTGA+TGG	-	chr2_1:13559465-13559484	None:intergenic	30.0%
	GACATTTCAATATGAAGTGT+CGG	+	chr2_1:13559619-13559638	Msa0196380:intron	30.0%
!	ACATTTCAATATGAAGTGTC+GGG	+	chr2_1:13559620-13559639	Msa0196380:intron	30.0%
	CTTTGCTAAGAAATCTAAGT+TGG	-	chr2_1:13559873-13559892	None:intergenic	30.0%
	GAATTCATCAAACTACAACT+CGG	+	chr2_1:13558419-13558438	Msa0196380:intron	30.0%
	AATTCATCAAACTACAACTC+GGG	+	chr2_1:13558420-13558439	Msa0196380:intron	30.0%
	AAACCTGATGAATTCATCAA+TGG	+	chr2_1:13558462-13558481	Msa0196380:intron	30.0%
	TTGACCAAGTCAAAATCAAA+TGG	+	chr2_1:13558662-13558681	Msa0196380:intron	30.0%
	TGACCAAGTCAAAATCAAAT+GGG	+	chr2_1:13558663-13558682	Msa0196380:intron	30.0%
!	TGAAGGCTAAAATACACTTT+TGG	-	chr2_1:13558783-13558802	None:intergenic	30.0%
!	TTGAACGTATTTGGTTCAAT+TGG	-	chr2_1:13558860-13558879	None:intergenic	30.0%
!!	TTGAACTTGTTGAACGTATT+TGG	-	chr2_1:13558869-13558888	None:intergenic	30.0%
!!	TGGTCAATTTCAAGTTCAAA+TGG	+	chr2_1:13558929-13558948	Msa0196380:intron	30.0%
	GAAAATAGTATCAAATTGGC+CGG	-	chr2_1:13558960-13558979	None:intergenic	30.0%
!	ATTTTTAACATGTGCCCTAA+GGG	-	chr2_1:13559046-13559065	None:intergenic	30.0%
	TTTCTAAACTTGTGCCTTAA+GGG	+	chr2_1:13559168-13559187	Msa0196380:intron	30.0%
	CAACATTCCAATGTTCATTA+CGG	+	chr2_1:13559326-13559345	Msa0196380:CDS	30.0%
	TATTTGTCTTGCATAGGATT+TGG	+	chr2_1:13559419-13559438	Msa0196380:intron	30.0%
	ATTTGTCTTGCATAGGATTT+GGG	+	chr2_1:13559420-13559439	Msa0196380:intron	30.0%
	TCAATTCATATTCACTGATG+GGG	-	chr2_1:13559463-13559482	None:intergenic	30.0%
	GTTCAATTCATATTCACTGA+TGG	-	chr2_1:13559465-13559484	None:intergenic	30.0%
	GACATTTCAATATGAAGTGT+CGG	+	chr2_1:13559619-13559638	Msa0196380:intron	30.0%
!	ACATTTCAATATGAAGTGTC+GGG	+	chr2_1:13559620-13559639	Msa0196380:intron	30.0%
	CTTTGCTAAGAAATCTAAGT+TGG	-	chr2_1:13559873-13559892	None:intergenic	30.0%
	GCATTATACGATTCAGTGAA+CGG	+	chr2_1:13558302-13558321	Msa0196380:CDS	35.0%
	CTTCCATTGATGAATTCATC+AGG	-	chr2_1:13558468-13558487	None:intergenic	35.0%
	GACCAAGTCAAAATCAAATG+GGG	+	chr2_1:13558664-13558683	Msa0196380:intron	35.0%
!	GTTTTGTCAAGTAGCGATTT+TGG	-	chr2_1:13558752-13558771	None:intergenic	35.0%
	ATCGCTACTTGACAAAACTT+AGG	+	chr2_1:13558754-13558773	Msa0196380:intron	35.0%
	TCGCTACTTGACAAAACTTA+GGG	+	chr2_1:13558755-13558774	Msa0196380:intron	35.0%
	AAATTGACCAATTTGCGAGT+TGG	-	chr2_1:13558919-13558938	None:intergenic	35.0%
	TCAAGTTCAAATGGTTGAAC+CGG	+	chr2_1:13558938-13558957	Msa0196380:intron	35.0%
!!	TAATGTTAACTTGTGCCCTT+AGG	+	chr2_1:13559028-13559047	Msa0196380:intron	35.0%
!!	AATGTTAACTTGTGCCCTTA+GGG	+	chr2_1:13559029-13559048	Msa0196380:intron	35.0%
!	GATTTTTAACATGTGCCCTA+AGG	-	chr2_1:13559047-13559066	None:intergenic	35.0%
	GTTTCTAAACTTGTGCCTTA+AGG	+	chr2_1:13559167-13559186	Msa0196380:intron	35.0%
!!	AATGTTAACTTGTGCCCTTA+AGG	-	chr2_1:13559029-13559048	None:intergenic	35.0%
!!!	TGGTTTTATGTTCACTCACA+AGG	+	chr2_1:13559264-13559283	Msa0196380:CDS	35.0%
	TTATGTTCACTCACAAGGAA+TGG	+	chr2_1:13559269-13559288	Msa0196380:CDS	35.0%
	TAGTGACTTACATAAAGGAC+AGG	+	chr2_1:13559298-13559317	Msa0196380:CDS	35.0%
!	CCATTTTCCGTAATGAACAT+TGG	-	chr2_1:13559336-13559355	None:intergenic	35.0%
	CCAATGTTCATTACGGAAAA+TGG	+	chr2_1:13559333-13559352	Msa0196380:CDS	35.0%
	ATTGAACGATGTCAAAAGAG+TGG	+	chr2_1:13559478-13559497	Msa0196380:CDS	35.0%
	ATTCTCTAGCAACAGCAATA+AGG	+	chr2_1:13559522-13559541	Msa0196380:CDS	35.0%
	TAGCAACAGCAATAAGGTAT+TGG	+	chr2_1:13559528-13559547	Msa0196380:intron	35.0%
!!!	CGACCTCTTTTTTCTAGTAA+TGG	-	chr2_1:13559563-13559582	None:intergenic	35.0%
	TCGCTTTAACATACTTCACT+TGG	+	chr2_1:13559588-13559607	Msa0196380:intron	35.0%
!!	CATTTCAATATGAAGTGTCG+GGG	+	chr2_1:13559621-13559640	Msa0196380:intron	35.0%
!!	CAAAACAGTTGATGATTGTG+TGG	-	chr2_1:13559899-13559918	None:intergenic	35.0%
!	CACACAATCATCAACTGTTT+TGG	+	chr2_1:13559897-13559916	Msa0196380:intron	35.0%
!	CTCTTCTAGACAATTTTGAG+TGG	+	chr2_1:13559996-13560015	Msa0196380:CDS	35.0%
!!	GACAATTTTGAGTGGAATCA+TGG	+	chr2_1:13560004-13560023	Msa0196380:CDS	35.0%
	GGAATCATGGATACAGTATA+AGG	+	chr2_1:13560017-13560036	Msa0196380:CDS	35.0%
	CATGGATACAGTATAAGGTT+TGG	+	chr2_1:13560022-13560041	Msa0196380:CDS	35.0%
	CATTTCAGAGCACAAAAATC+TGG	+	chr2_1:13560114-13560133	Msa0196380:CDS	35.0%
!!!	TAGTATGTCTTTTTTGGTGG+TGG	+	chr2_1:13560313-13560332	Msa0196380:three_prime_UTR	35.0%
	GCATTATACGATTCAGTGAA+CGG	+	chr2_1:13558302-13558321	Msa0196380:CDS	35.0%
	CTTCCATTGATGAATTCATC+AGG	-	chr2_1:13558468-13558487	None:intergenic	35.0%
	GACCAAGTCAAAATCAAATG+GGG	+	chr2_1:13558664-13558683	Msa0196380:intron	35.0%
!	GTTTTGTCAAGTAGCGATTT+TGG	-	chr2_1:13558752-13558771	None:intergenic	35.0%
	ATCGCTACTTGACAAAACTT+AGG	+	chr2_1:13558754-13558773	Msa0196380:intron	35.0%
	TCGCTACTTGACAAAACTTA+GGG	+	chr2_1:13558755-13558774	Msa0196380:intron	35.0%
	AAATTGACCAATTTGCGAGT+TGG	-	chr2_1:13558919-13558938	None:intergenic	35.0%
	TCAAGTTCAAATGGTTGAAC+CGG	+	chr2_1:13558938-13558957	Msa0196380:intron	35.0%
!!	TAATGTTAACTTGTGCCCTT+AGG	+	chr2_1:13559028-13559047	Msa0196380:intron	35.0%
!!	AATGTTAACTTGTGCCCTTA+GGG	+	chr2_1:13559029-13559048	Msa0196380:intron	35.0%
!	GATTTTTAACATGTGCCCTA+AGG	-	chr2_1:13559047-13559066	None:intergenic	35.0%
	GTTTCTAAACTTGTGCCTTA+AGG	+	chr2_1:13559167-13559186	Msa0196380:intron	35.0%
!!	AATGTTAACTTGTGCCCTTA+AGG	-	chr2_1:13559029-13559048	None:intergenic	35.0%
!!!	TGGTTTTATGTTCACTCACA+AGG	+	chr2_1:13559264-13559283	Msa0196380:CDS	35.0%
	TTATGTTCACTCACAAGGAA+TGG	+	chr2_1:13559269-13559288	Msa0196380:CDS	35.0%
	TAGTGACTTACATAAAGGAC+AGG	+	chr2_1:13559298-13559317	Msa0196380:CDS	35.0%
!	CCATTTTCCGTAATGAACAT+TGG	-	chr2_1:13559336-13559355	None:intergenic	35.0%
	CCAATGTTCATTACGGAAAA+TGG	+	chr2_1:13559333-13559352	Msa0196380:CDS	35.0%
	ATTGAACGATGTCAAAAGAG+TGG	+	chr2_1:13559478-13559497	Msa0196380:CDS	35.0%
	ATTCTCTAGCAACAGCAATA+AGG	+	chr2_1:13559522-13559541	Msa0196380:CDS	35.0%
	TAGCAACAGCAATAAGGTAT+TGG	+	chr2_1:13559528-13559547	Msa0196380:intron	35.0%
!!!	CGACCTCTTTTTTCTAGTAA+TGG	-	chr2_1:13559563-13559582	None:intergenic	35.0%
	TCGCTTTAACATACTTCACT+TGG	+	chr2_1:13559588-13559607	Msa0196380:intron	35.0%
!!	CATTTCAATATGAAGTGTCG+GGG	+	chr2_1:13559621-13559640	Msa0196380:intron	35.0%
!!	CAAAACAGTTGATGATTGTG+TGG	-	chr2_1:13559899-13559918	None:intergenic	35.0%
!	CACACAATCATCAACTGTTT+TGG	+	chr2_1:13559897-13559916	Msa0196380:intron	35.0%
!	CTCTTCTAGACAATTTTGAG+TGG	+	chr2_1:13559996-13560015	Msa0196380:CDS	35.0%
!!	GACAATTTTGAGTGGAATCA+TGG	+	chr2_1:13560004-13560023	Msa0196380:CDS	35.0%
	GGAATCATGGATACAGTATA+AGG	+	chr2_1:13560017-13560036	Msa0196380:CDS	35.0%
	CATGGATACAGTATAAGGTT+TGG	+	chr2_1:13560022-13560041	Msa0196380:CDS	35.0%
	CATTTCAGAGCACAAAAATC+TGG	+	chr2_1:13560114-13560133	Msa0196380:CDS	35.0%
!!!	TAGTATGTCTTTTTTGGTGG+TGG	+	chr2_1:13560313-13560332	Msa0196380:three_prime_UTR	35.0%
	TTATACGATTCAGTGAACGG+TGG	+	chr2_1:13558305-13558324	Msa0196380:CDS	40.0%
	TTTGGATCAACGAGAATCAG+TGG	+	chr2_1:13558336-13558355	Msa0196380:intron	40.0%
	TCGGGAGTAAGGATTTGATT+GGG	+	chr2_1:13558438-13558457	Msa0196380:intron	40.0%
!!!	TTTTGACTTGGTCAAAGCAG+AGG	-	chr2_1:13558657-13558676	None:intergenic	40.0%
!!!	AGCCCCATTTGATTTTGACT+TGG	-	chr2_1:13558669-13558688	None:intergenic	40.0%
	TTGCAAAAGGGGGTAAAGTT+GGG	+	chr2_1:13558695-13558714	Msa0196380:intron	40.0%
	CGCTACTTGACAAAACTTAG+GGG	+	chr2_1:13558756-13558775	Msa0196380:intron	40.0%
	GCTACTTGACAAAACTTAGG+GGG	+	chr2_1:13558757-13558776	Msa0196380:intron	40.0%
	GATCAAACCAACTCGCAAAT+TGG	+	chr2_1:13558909-13558928	Msa0196380:intron	40.0%
!	GGAGTACTTGAGTAGTTACT+TGG	+	chr2_1:13559499-13559518	Msa0196380:CDS	40.0%
	GTTACAAATGGAAGGCGATT+TGG	-	chr2_1:13559813-13559832	None:intergenic	40.0%
	AAGGTTTGGACTTCATCATG+TGG	+	chr2_1:13560036-13560055	Msa0196380:CDS	40.0%
!!	TCTTGGTGTTCTATTGAGAG+TGG	-	chr2_1:13560068-13560087	None:intergenic	40.0%
	ACTCTCAATAGAACACCAAG+AGG	+	chr2_1:13560067-13560086	Msa0196380:CDS	40.0%
	TACCAAAATGCTGATCCTCT+TGG	-	chr2_1:13560085-13560104	None:intergenic	40.0%
	ACAAAAATCTGGCAGGCATT+AGG	+	chr2_1:13560125-13560144	Msa0196380:CDS	40.0%
	TTATACGATTCAGTGAACGG+TGG	+	chr2_1:13558305-13558324	Msa0196380:CDS	40.0%
	TTTGGATCAACGAGAATCAG+TGG	+	chr2_1:13558336-13558355	Msa0196380:intron	40.0%
	TCGGGAGTAAGGATTTGATT+GGG	+	chr2_1:13558438-13558457	Msa0196380:intron	40.0%
!!!	TTTTGACTTGGTCAAAGCAG+AGG	-	chr2_1:13558657-13558676	None:intergenic	40.0%
!!!	AGCCCCATTTGATTTTGACT+TGG	-	chr2_1:13558669-13558688	None:intergenic	40.0%
	TTGCAAAAGGGGGTAAAGTT+GGG	+	chr2_1:13558695-13558714	Msa0196380:intron	40.0%
	CGCTACTTGACAAAACTTAG+GGG	+	chr2_1:13558756-13558775	Msa0196380:intron	40.0%
	GCTACTTGACAAAACTTAGG+GGG	+	chr2_1:13558757-13558776	Msa0196380:intron	40.0%
	GATCAAACCAACTCGCAAAT+TGG	+	chr2_1:13558909-13558928	Msa0196380:intron	40.0%
!	GGAGTACTTGAGTAGTTACT+TGG	+	chr2_1:13559499-13559518	Msa0196380:CDS	40.0%
	GTTACAAATGGAAGGCGATT+TGG	-	chr2_1:13559813-13559832	None:intergenic	40.0%
	AAGGTTTGGACTTCATCATG+TGG	+	chr2_1:13560036-13560055	Msa0196380:CDS	40.0%
!!	TCTTGGTGTTCTATTGAGAG+TGG	-	chr2_1:13560068-13560087	None:intergenic	40.0%
	ACTCTCAATAGAACACCAAG+AGG	+	chr2_1:13560067-13560086	Msa0196380:CDS	40.0%
	TACCAAAATGCTGATCCTCT+TGG	-	chr2_1:13560085-13560104	None:intergenic	40.0%
	ACAAAAATCTGGCAGGCATT+AGG	+	chr2_1:13560125-13560144	Msa0196380:CDS	40.0%
	CAAACTACAACTCGGGAGTA+AGG	+	chr2_1:13558427-13558446	Msa0196380:intron	45.0%
	CTCGGGAGTAAGGATTTGAT+TGG	+	chr2_1:13558437-13558456	Msa0196380:intron	45.0%
	CGGGAGTAAGGATTTGATTG+GGG	+	chr2_1:13558439-13558458	Msa0196380:intron	45.0%
	AAGCAGAGGTGACCAATAGA+TGG	-	chr2_1:13558643-13558662	None:intergenic	45.0%
	TGGGGCTTATGAGTTGCAAA+AGG	+	chr2_1:13558682-13558701	Msa0196380:intron	45.0%
	GGGGCTTATGAGTTGCAAAA+GGG	+	chr2_1:13558683-13558702	Msa0196380:intron	45.0%
	GGGCTTATGAGTTGCAAAAG+GGG	+	chr2_1:13558684-13558703	Msa0196380:intron	45.0%
	GGCTTATGAGTTGCAAAAGG+GGG	+	chr2_1:13558685-13558704	Msa0196380:intron	45.0%
	GTTGCAAAAGGGGGTAAAGT+TGG	+	chr2_1:13558694-13558713	Msa0196380:intron	45.0%
	TGCAAAAGGGGGTAAAGTTG+GGG	+	chr2_1:13558696-13558715	Msa0196380:intron	45.0%
	AGAAAAGGAGCAGATGTGAG+AGG	+	chr2_1:13559959-13559978	Msa0196380:intron	45.0%
	GAAAAGGAGCAGATGTGAGA+GGG	+	chr2_1:13559960-13559979	Msa0196380:intron	45.0%
!!	ATGTGAGAGGGTACTTTGTG+TGG	+	chr2_1:13559972-13559991	Msa0196380:CDS	45.0%
!	CACCAAGAGGATCAGCATTT+TGG	+	chr2_1:13560080-13560099	Msa0196380:CDS	45.0%
	TCAGAGCACAAAAATCTGGC+AGG	+	chr2_1:13560118-13560137	Msa0196380:CDS	45.0%
	AATCTGGCAGGCATTAGGTT+TGG	+	chr2_1:13560130-13560149	Msa0196380:CDS	45.0%
	ATCTGGCAGGCATTAGGTTT+GGG	+	chr2_1:13560131-13560150	Msa0196380:CDS	45.0%
!!!	TGTCTTTTTTGGTGGTGGAC+AGG	+	chr2_1:13560318-13560337	Msa0196380:three_prime_UTR	45.0%
	CACGATATATGCAAGGTTCG+AGG	-	chr2_1:13560351-13560370	None:intergenic	45.0%
	CAAACTACAACTCGGGAGTA+AGG	+	chr2_1:13558427-13558446	Msa0196380:intron	45.0%
	CTCGGGAGTAAGGATTTGAT+TGG	+	chr2_1:13558437-13558456	Msa0196380:intron	45.0%
	CGGGAGTAAGGATTTGATTG+GGG	+	chr2_1:13558439-13558458	Msa0196380:intron	45.0%
	AAGCAGAGGTGACCAATAGA+TGG	-	chr2_1:13558643-13558662	None:intergenic	45.0%
	TGGGGCTTATGAGTTGCAAA+AGG	+	chr2_1:13558682-13558701	Msa0196380:intron	45.0%
	GGGGCTTATGAGTTGCAAAA+GGG	+	chr2_1:13558683-13558702	Msa0196380:intron	45.0%
	GGGCTTATGAGTTGCAAAAG+GGG	+	chr2_1:13558684-13558703	Msa0196380:intron	45.0%
	GGCTTATGAGTTGCAAAAGG+GGG	+	chr2_1:13558685-13558704	Msa0196380:intron	45.0%
	GTTGCAAAAGGGGGTAAAGT+TGG	+	chr2_1:13558694-13558713	Msa0196380:intron	45.0%
	TGCAAAAGGGGGTAAAGTTG+GGG	+	chr2_1:13558696-13558715	Msa0196380:intron	45.0%
	AGAAAAGGAGCAGATGTGAG+AGG	+	chr2_1:13559959-13559978	Msa0196380:intron	45.0%
	GAAAAGGAGCAGATGTGAGA+GGG	+	chr2_1:13559960-13559979	Msa0196380:intron	45.0%
!!	ATGTGAGAGGGTACTTTGTG+TGG	+	chr2_1:13559972-13559991	Msa0196380:CDS	45.0%
!	CACCAAGAGGATCAGCATTT+TGG	+	chr2_1:13560080-13560099	Msa0196380:CDS	45.0%
	TCAGAGCACAAAAATCTGGC+AGG	+	chr2_1:13560118-13560137	Msa0196380:CDS	45.0%
	AATCTGGCAGGCATTAGGTT+TGG	+	chr2_1:13560130-13560149	Msa0196380:CDS	45.0%
	ATCTGGCAGGCATTAGGTTT+GGG	+	chr2_1:13560131-13560150	Msa0196380:CDS	45.0%
!!!	TGTCTTTTTTGGTGGTGGAC+AGG	+	chr2_1:13560318-13560337	Msa0196380:three_prime_UTR	45.0%
	CACGATATATGCAAGGTTCG+AGG	-	chr2_1:13560351-13560370	None:intergenic	45.0%
	TACGATTCAGTGAACGGTGG+TGG	+	chr2_1:13558308-13558327	Msa0196380:CDS	50.0%
!	TGAACGGTGGTGGTGATGTT+TGG	+	chr2_1:13558318-13558337	Msa0196380:intron	50.0%
	GGATCAACGAGAATCAGTGG+TGG	+	chr2_1:13558339-13558358	Msa0196380:intron	50.0%
	TCAACGAGAATCAGTGGTGG+CGG	+	chr2_1:13558342-13558361	Msa0196380:intron	50.0%
	GCAAAAGGGGGTAAAGTTGG+GGG	+	chr2_1:13558697-13558716	Msa0196380:intron	50.0%
	CAAAAGGGGGTAAAGTTGGG+GGG	+	chr2_1:13558698-13558717	Msa0196380:intron	50.0%
	GGGGATCAGAGTTCGAATCT+AGG	+	chr2_1:13559640-13559659	Msa0196380:intron	50.0%
	TACGATTCAGTGAACGGTGG+TGG	+	chr2_1:13558308-13558327	Msa0196380:CDS	50.0%
!	TGAACGGTGGTGGTGATGTT+TGG	+	chr2_1:13558318-13558337	Msa0196380:intron	50.0%
	GGATCAACGAGAATCAGTGG+TGG	+	chr2_1:13558339-13558358	Msa0196380:intron	50.0%
	TCAACGAGAATCAGTGGTGG+CGG	+	chr2_1:13558342-13558361	Msa0196380:intron	50.0%
	GCAAAAGGGGGTAAAGTTGG+GGG	+	chr2_1:13558697-13558716	Msa0196380:intron	50.0%
	CAAAAGGGGGTAAAGTTGGG+GGG	+	chr2_1:13558698-13558717	Msa0196380:intron	50.0%
	GGGGATCAGAGTTCGAATCT+AGG	+	chr2_1:13559640-13559659	Msa0196380:intron	50.0%
	ACCAATAGATGGACGCCACG+TGG	-	chr2_1:13558632-13558651	None:intergenic	55.0%
	AAAGTTGGGGGGCTGGAAAG+TGG	+	chr2_1:13558709-13558728	Msa0196380:intron	55.0%
	CCAAGCAAGCGCAGTCTACA+AGG	-	chr2_1:13559247-13559266	None:intergenic	55.0%
	CCTTGTAGACTGCGCTTGCT+TGG	+	chr2_1:13559244-13559263	Msa0196380:intron	55.0%
	ACCAATAGATGGACGCCACG+TGG	-	chr2_1:13558632-13558651	None:intergenic	55.0%
	AAAGTTGGGGGGCTGGAAAG+TGG	+	chr2_1:13558709-13558728	Msa0196380:intron	55.0%
	CCAAGCAAGCGCAGTCTACA+AGG	-	chr2_1:13559247-13559266	None:intergenic	55.0%
	CCTTGTAGACTGCGCTTGCT+TGG	+	chr2_1:13559244-13559263	Msa0196380:intron	55.0%
!!	ACGAGAATCAGTGGTGGCGG+CGG	+	chr2_1:13558345-13558364	Msa0196380:intron	60.0%
	GCCACGTGGCGTCCATCTAT+TGG	+	chr2_1:13558628-13558647	Msa0196380:intron	60.0%
!!	ACGAGAATCAGTGGTGGCGG+CGG	+	chr2_1:13558345-13558364	Msa0196380:intron	60.0%
	GCCACGTGGCGTCCATCTAT+TGG	+	chr2_1:13558628-13558647	Msa0196380:intron	60.0%
!!	AGAATCAGTGGTGGCGGCGG+TGG	+	chr2_1:13558348-13558367	Msa0196380:intron	65.0%
	AGGGGGTAAAGTTGGGGGGC+TGG	+	chr2_1:13558702-13558721	Msa0196380:intron	65.0%
!!	AGAATCAGTGGTGGCGGCGG+TGG	+	chr2_1:13558348-13558367	Msa0196380:intron	65.0%
	AGGGGGTAAAGTTGGGGGGC+TGG	+	chr2_1:13558702-13558721	Msa0196380:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	13558275	13560376	13558275	ID=Msa0196380;Name=Msa0196380
chr2_1	mRNA	13558275	13560376	13558275	ID=Msa0196380-mRNA-1;Parent=Msa0196380;Name=Msa0196380-mRNA-1;_AED=0.43;_eAED=0.48;_QI=0\|0.66\|0.75\|1\|1\|1\|4\|208\|159
chr2_1	exon	13558275	13558334	13558275	ID=Msa0196380-mRNA-1:exon:5857;Parent=Msa0196380-mRNA-1
chr2_1	exon	13559252	13559354	13559252	ID=Msa0196380-mRNA-1:exon:5858;Parent=Msa0196380-mRNA-1
chr2_1	exon	13559435	13559543	13559435	ID=Msa0196380-mRNA-1:exon:5859;Parent=Msa0196380-mRNA-1
chr2_1	exon	13559961	13560376	13559961	ID=Msa0196380-mRNA-1:exon:5860;Parent=Msa0196380-mRNA-1
chr2_1	CDS	13558275	13558334	13558275	ID=Msa0196380-mRNA-1:cds;Parent=Msa0196380-mRNA-1
chr2_1	CDS	13559252	13559354	13559252	ID=Msa0196380-mRNA-1:cds;Parent=Msa0196380-mRNA-1
chr2_1	CDS	13559435	13559543	13559435	ID=Msa0196380-mRNA-1:cds;Parent=Msa0196380-mRNA-1
chr2_1	CDS	13559961	13560168	13559961	ID=Msa0196380-mRNA-1:cds;Parent=Msa0196380-mRNA-1
chr2_1	three_prime_UTR	13560169	13560376	13560169	ID=Msa0196380-mRNA-1:three_prime_utr;Parent=Msa0196380-mRNA-1

Gene Sequence

>Msa0196380

ATGGGTTGCTCATTCTCTGGTTTAAATGCATTATACGATTCAGTGAACGGTGGTGGTGATACTGCGCTTGCTTGGTTTTATGTTCACTCACAAGGAATGGAAAATATAGTGACTTACATAAAGGACAGGTACAACAACATTCCAATGTTCATTACGGAAAATGGATTTGGGACAAGTGAGAGTTCTTACCCCATCAGTGAATATGAATTGAACGATGTCAAAAGAGTGGAGTACTTGAGTAGTTACTTGGATTCTCTAGCAACAGCAATAAGAAAAGGAGCAGATGTGAGAGGGTACTTTGTGTGGTCTCTTCTAGACAATTTTGAGTGGAATCATGGATACAGTATAAGGTTTGGACTTCATCATGTGGACTTAGCCACTCTCAATAGAACACCAAGAGGATCAGCATTTTGGTACAAAAATTTCATTTCAGAGCACAAAAATCTGGCAGGCATTAGGTTTGGGCATGCTCAAGTGTGA

Protein sequence

>Msa0196380

MGCSFSGLNALYDSVNGGGDTALAWFYVHSQGMENIVTYIKDRYNNIPMFITENGFGTSESSYPISEYELNDVKRVEYLSSYLDSLATAIRKGADVRGYFVWSLLDNFEWNHGYSIRFGLHHVDLATLNRTPRGSAFWYKNFISEHKNLAGIRFGHAQV*