AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0145580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145580 MtrunA17_Chr1g0154411 97.234 470 8 3 1 466 1 469 0.0 934
Msa0145580 MtrunA17_Chr8g0361841 41.528 301 160 5 172 457 161 460 6.99e-73 237
Msa0145580 MtrunA17_Chr1g0200501 40.000 305 160 6 172 457 395 695 4.98e-67 228
Msa0145580 MtrunA17_Chr4g0047251 40.129 309 170 6 172 466 166 473 1.03e-64 218
Msa0145580 MtrunA17_Chr8g0378731 31.473 448 266 11 20 460 37 450 5.83e-63 212
Msa0145580 MtrunA17_Chr2g0282261 39.189 296 169 5 172 457 206 500 1.33e-60 207
Msa0145580 MtrunA17_Chr2g0317511 40.656 305 153 9 172 457 227 522 6.41e-59 203
Msa0145580 MtrunA17_Chr2g0285981 32.993 294 182 9 162 445 107 395 1.00e-37 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0145580 AT5G42660.1 65.106 470 148 4 1 464 1 460 0.0 625
Msa0145580 AT2G02910.2 39.710 345 190 6 130 463 118 455 8.00e-76 245
Msa0145580 AT2G02910.1 39.710 345 190 6 130 463 118 455 8.00e-76 245
Msa0145580 AT4G38500.1 33.557 447 250 11 23 460 38 446 1.14e-68 227
Msa0145580 AT1G34550.2 40.000 305 160 6 172 457 327 627 1.74e-68 230
Msa0145580 AT1G34550.1 40.000 305 160 6 172 457 421 721 5.15e-68 231
Msa0145580 AT4G09630.2 39.677 310 164 6 172 462 381 686 1.48e-66 226
Msa0145580 AT4G09630.1 39.677 310 164 6 172 462 396 701 1.79e-66 226
Msa0145580 AT1G53040.2 41.077 297 163 5 172 457 187 482 1.05e-64 218
Msa0145580 AT1G53040.1 41.077 297 163 5 172 457 187 482 1.05e-64 218
Msa0145580 AT1G53040.6 41.077 297 163 5 172 457 187 482 1.05e-64 218
Msa0145580 AT1G53040.3 41.438 292 159 5 172 452 187 477 2.15e-64 216
Msa0145580 AT1G53040.4 41.438 292 159 5 172 452 187 477 2.15e-64 216
Msa0145580 AT1G28240.1 39.262 298 166 7 172 457 214 508 1.96e-61 210
Msa0145580 AT1G53040.5 40.465 215 120 3 172 379 187 400 8.71e-45 162
Msa0145580 AT5G46220.1 30.104 289 188 7 152 430 98 382 1.40e-35 137

Find 118 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAGCAAAATACTCTATT+TGG 0.077140 1_4:-5287393 Msa0145580:CDS
CAAAGCTGATTTAGTTAAAT+TGG 0.173985 1_4:-5286637 Msa0145580:exon
TCCAAAGCAAAATCTCTTTC+TGG 0.212926 1_4:+5286434 None:intergenic
CTAGTGGGTCCCTCCTAAAT+TGG 0.222026 1_4:+5287356 None:intergenic
AGAAGCTTCTTGTTAAATAC+TGG 0.261001 1_4:-5289883 Msa0145580:CDS
TTCAACCTTTGATCAGAAAA+AGG 0.262613 1_4:+5287725 None:intergenic
CCTGTAGACAAGAGATTTAA+TGG 0.266147 1_4:-5287169 Msa0145580:CDS
GCTAATGAACAAATGAAATA+AGG 0.306810 1_4:+5286578 None:intergenic
TATCTCTTTCCTCAAATGTT+TGG 0.307680 1_4:+5288282 None:intergenic
CACATATACCTGATTTGAAT+TGG 0.324506 1_4:+5286556 None:intergenic
TTCATTAGCCAATTCAAATC+AGG 0.343259 1_4:-5286564 Msa0145580:three_prime_UTR
TACCGAGTTTCTTTCGTTTA+CGG 0.350045 1_4:+5289921 None:intergenic
AGGTTTGCTATGTAGCATTC+TGG 0.362293 1_4:-5287844 Msa0145580:CDS
GGTCGCAGAGTTGGGGATAA+TGG 0.363714 1_4:-5287788 Msa0145580:CDS
GTGGCGTGTTATTGTCGTTC+AGG 0.366914 1_4:-5287753 Msa0145580:CDS
GTTGTATCTACTTGTGCATT+TGG 0.368333 1_4:-5288005 Msa0145580:CDS
TAGACTCCAAGTCCCAATTT+AGG 0.368651 1_4:-5287369 Msa0145580:CDS
AATTAGTGGGTCGCAGAGTT+GGG 0.373736 1_4:-5287796 Msa0145580:CDS
CCATTAAATCTCTTGTCTAC+AGG 0.375251 1_4:+5287169 None:intergenic
ACGAGCTCCATGTTCTGATA+TGG 0.376444 1_4:+5287291 None:intergenic
GTTGGGGATAATGGATTTGT+TGG 0.377221 1_4:-5287779 Msa0145580:CDS
TTCAACCGCCACAGAACATA+TGG 0.378529 1_4:+5286748 None:intergenic
ATAAACACTGCCTCTGGAAC+TGG 0.382874 1_4:+5290102 None:intergenic
GAAGAATCTAGTTTACCTAT+TGG 0.384777 1_4:-5288404 Msa0145580:CDS
GGTTCGTTATCATTCCGATT+TGG 0.386955 1_4:-5290041 Msa0145580:five_prime_UTR
ACTAAAAGCGCAGGAATTAG+TGG 0.395475 1_4:-5287810 Msa0145580:CDS
TCTCCTCTCATAATCGGTAT+AGG 0.396549 1_4:-5286507 Msa0145580:three_prime_UTR
TCAAGCAAAATACTCTATTT+GGG 0.399723 1_4:-5287392 Msa0145580:CDS
CCTACTACTCATGTTGTTGC+TGG 0.399883 1_4:-5289689 Msa0145580:CDS
CTAATCTATTGATGTGCGTC+TGG 0.401746 1_4:-5286816 Msa0145580:CDS
TCTTCCTCTCCTCTCATAAT+CGG 0.404697 1_4:-5286513 Msa0145580:three_prime_UTR
TTTGTTATAAACACTGCCTC+TGG 0.409627 1_4:+5290096 None:intergenic
ACAGTGCGAATGGTGGGTTT+AGG 0.412123 1_4:-5288070 Msa0145580:CDS
AGTTGCACTTCAACTTCCTC+TGG 0.414058 1_4:+5287217 None:intergenic
ATGTCAGCGACTGATTTAAT+AGG 0.418555 1_4:-5288368 Msa0145580:CDS
GAATTAGTGGGTCGCAGAGT+TGG 0.426550 1_4:-5287797 Msa0145580:CDS
AAGAGATTTAATGGAAAGAA+AGG 0.439466 1_4:-5287160 Msa0145580:intron
AGTGGCGGCAGACAGTTATA+AGG 0.451513 1_4:-5290062 Msa0145580:five_prime_UTR
TGTCTGCACTCGCAAGGATC+TGG 0.451591 1_4:-5286698 Msa0145580:CDS
GTGTGTTGGAAGCGCTCCTT+TGG 0.451902 1_4:-5287333 Msa0145580:CDS
AGGTGGTTCGCTTCACGTCT+AGG 0.456871 1_4:-5286786 Msa0145580:CDS
TAGTGGGTCCCTCCTAAATT+GGG 0.459505 1_4:+5287357 None:intergenic
TACTGGAAACCAAACATTTG+AGG 0.460309 1_4:-5288291 Msa0145580:CDS
CTGAATCAATACAGAAAAGA+TGG 0.467593 1_4:-5287196 Msa0145580:CDS
GTCAGAGGCTTCACTTAAGA+AGG 0.470559 1_4:-5287949 Msa0145580:intron
GGTTTGCTATGTAGCATTCT+GGG 0.477968 1_4:-5287843 Msa0145580:CDS
AAACTACGACGGCACATTGT+GGG 0.478159 1_4:-5288097 Msa0145580:CDS
ATGAGGCTAAGGCCGTTGTC+AGG 0.480704 1_4:-5287255 Msa0145580:CDS
GTCCCTCCTAAATTGGGACT+TGG 0.482377 1_4:+5287363 None:intergenic
CACATCAATAGATTAGTTAG+TGG 0.489792 1_4:+5286823 None:intergenic
CCAGCAACAACATGAGTAGT+AGG 0.491549 1_4:+5289689 None:intergenic
ATAATGGATTTGTTGGAAAG+TGG 0.493171 1_4:-5287772 Msa0145580:CDS
GGTGGTTCGCTTCACGTCTA+GGG 0.510231 1_4:-5286785 Msa0145580:CDS
GTGAAGCCTCTGTTATCGTC+AGG 0.511246 1_4:-5286855 Msa0145580:CDS
TAGTTCATCGGTTTCGTCGT+CGG 0.511725 1_4:+5289967 None:intergenic
TTACTATGAGCTGTTTGAGT+AGG 0.512906 1_4:-5286464 Msa0145580:three_prime_UTR
GGAAGATTGATATACCAAAT+CGG 0.520062 1_4:+5290027 None:intergenic
TAACTAAATCAGCTTTGCAA+TGG 0.522702 1_4:+5286643 None:intergenic
ATATACAAGACTTTACCAAT+AGG 0.522988 1_4:+5288389 None:intergenic
TAAACTAGATTCTTCTTCCA+CGG 0.523311 1_4:+5288412 None:intergenic
GATGATCTCTATCAACCGAT+TGG 0.532985 1_4:-5287975 Msa0145580:CDS
GTATCTACTTGTGCATTTGG+TGG 0.539522 1_4:-5288002 Msa0145580:CDS
AGATCCTTGCGAGTGCAGAC+AGG 0.541955 1_4:+5286700 None:intergenic
TGTCGTTGTTGAAGCAATGT+TGG 0.543414 1_4:+5289778 None:intergenic
TCAGCGACTGATTTAATAGG+AGG 0.546235 1_4:-5288365 Msa0145580:CDS
AAACTAGATTCTTCTTCCAC+GGG 0.546495 1_4:+5288413 None:intergenic
GACGACGAAACCGATGAACT+AGG 0.549148 1_4:-5289965 Msa0145580:CDS
CAAGGATCTGGTCAATAGCA+TGG 0.556262 1_4:-5286686 Msa0145580:CDS
GAGGGACCCACTAGGTGTGT+TGG 0.558276 1_4:-5287347 Msa0145580:CDS
TCTACTTGTGCATTTGGTGG+CGG 0.565708 1_4:-5287999 Msa0145580:CDS
TAAGTTAGAAAACTACAGCT+AGG 0.566181 1_4:+5286603 None:intergenic
GTACAGAACTTGTGCGCCAA+AGG 0.567215 1_4:+5287317 None:intergenic
TAGTGTCTATGATGAGGCTA+AGG 0.569258 1_4:-5287266 Msa0145580:CDS
GTTCCCTGTCTGCACTCGCA+AGG 0.571226 1_4:-5286704 Msa0145580:CDS
GAAGATAAAAGTTTCATGCA+AGG 0.574340 1_4:-5288038 Msa0145580:CDS
TTGCTTGAGGGAAAAGGCGA+TGG 0.577341 1_4:+5287407 None:intergenic
GAAGCCTCTGACATTCCAAT+CGG 0.578839 1_4:+5287960 None:intergenic
GTGCGTCTGGTTTAATGAGG+TGG 0.582996 1_4:-5286803 Msa0145580:CDS
TCAACCGCCACAGAACATAT+GGG 0.583405 1_4:+5286749 None:intergenic
TGAAATCACACTAAAAGCGC+AGG 0.586944 1_4:-5287819 Msa0145580:CDS
ATTAGTGGGTCGCAGAGTTG+GGG 0.587159 1_4:-5287795 Msa0145580:CDS
ACTCCAAGTCCCAATTTAGG+AGG 0.588616 1_4:-5287366 Msa0145580:CDS
CGCCGTAAACGAAAGAAACT+CGG 0.589754 1_4:-5289923 Msa0145580:CDS
AAGGATCTGGTCAATAGCAT+GGG 0.590506 1_4:-5286685 Msa0145580:CDS
GGTTCTACAGTGCGAATGGT+GGG 0.594182 1_4:-5288076 Msa0145580:CDS
TCGTCGTCGGAGATTGAGAT+CGG 0.596070 1_4:+5289980 None:intergenic
ACACGAATTGGTTTAAGACC+AGG 0.598308 1_4:-5289812 Msa0145580:CDS
GCGCATTCGACCTAGTTCAT+CGG 0.599118 1_4:+5289955 None:intergenic
GATCCTTGCGAGTGCAGACA+GGG 0.600367 1_4:+5286701 None:intergenic
GAAACTACGACGGCACATTG+TGG 0.606798 1_4:-5288098 Msa0145580:CDS
CAATTTAGGAGGGACCCACT+AGG 0.609024 1_4:-5287355 Msa0145580:CDS
CTCCAAGTCCCAATTTAGGA+GGG 0.612198 1_4:-5287365 Msa0145580:CDS
GGGTTCTACAGTGCGAATGG+TGG 0.617468 1_4:-5288077 Msa0145580:CDS
AGCGCTTCCAACACACCTAG+TGG 0.619009 1_4:+5287340 None:intergenic
GTTGAATGGTAAAATTCCCA+AGG 0.623439 1_4:-5287708 Msa0145580:intron
ATTGTCTCAATTGCGTGCAG+AGG 0.623452 1_4:-5288333 Msa0145580:CDS
CTAAAAGCGCAGGAATTAGT+GGG 0.625147 1_4:-5287809 Msa0145580:CDS
TCGTAGTAGTGTCTATGATG+AGG 0.628284 1_4:-5287272 Msa0145580:CDS
CAGCGACTGATTTAATAGGA+GGG 0.631742 1_4:-5288364 Msa0145580:CDS
GATGTGCGTCTGGTTTAATG+AGG 0.632480 1_4:-5286806 Msa0145580:CDS
TCAGCTTCCCATATGTTCTG+TGG 0.637981 1_4:-5286756 Msa0145580:CDS
TGTGGGTTCTACAGTGCGAA+TGG 0.652523 1_4:-5288080 Msa0145580:CDS
GCGCTTCCAACACACCTAGT+GGG 0.655267 1_4:+5287341 None:intergenic
GCTTCCCATATGTTCTGTGG+CGG 0.655449 1_4:-5286753 Msa0145580:CDS
GTACTTGCCATATCAGAACA+TGG 0.661039 1_4:-5287298 Msa0145580:CDS
AATCAATCATCCAGTTCCAG+AGG 0.661700 1_4:-5290112 Msa0145580:five_prime_UTR
ATGAGAGGAGAGGAAGAGAG+AGG 0.663436 1_4:+5286519 None:intergenic
TTTCATGCAAGGTTGCAAAG+TGG 0.666633 1_4:-5288027 Msa0145580:CDS
TAACCTATACCGATTATGAG+AGG 0.674432 1_4:+5286504 None:intergenic
TCAACCGATTGGAATGTCAG+AGG 0.688554 1_4:-5287964 Msa0145580:CDS
TATACCGATTATGAGAGGAG+AGG 0.691482 1_4:+5286509 None:intergenic
GTTATCGTAGAAATCTGTGT+CGG 0.699130 1_4:+5286403 None:intergenic
AGATCGGTAGAGTGTTGCTG+TGG 0.705202 1_4:+5289996 None:intergenic
AGTGTTGCTGTGGAACATTG+AGG 0.708184 1_4:+5290006 None:intergenic
TGAGCAACTAGAGATTCCCG+TGG 0.719886 1_4:-5288429 Msa0145580:CDS
ATGTTGGAAGAAGAACTACC+TGG 0.722649 1_4:+5289794 None:intergenic
ATGCTTCCTGACGATAACAG+AGG 0.723941 1_4:+5286849 None:intergenic
ATAGGTGAAAGAAACTACGA+CGG 0.775814 1_4:-5288108 Msa0145580:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAATCAAGAAAAA+GGG + chr1_4:5286845-5286864 None:intergenic 10.0%
!! AATAAAAAAAATCAAGAAAA+AGG + chr1_4:5286846-5286865 None:intergenic 10.0%
!!! TTTTATTTTGATAAAACTTA+AGG - chr1_4:5287955-5287974 Msa0145580:CDS 10.0%
!! TTATTATAAGTAATATAGTT+TGG - chr1_4:5288330-5288349 Msa0145580:CDS 10.0%
!!! ACAAGTTTTAATTTATTTAC+TGG - chr1_4:5288169-5288188 Msa0145580:intron 15.0%
!! ATGTGAATTAAAATTAATCT+GGG + chr1_4:5288260-5288279 None:intergenic 15.0%
!! AATGTGAATTAAAATTAATC+TGG + chr1_4:5288261-5288280 None:intergenic 15.0%
!! GATTCAACATTATAAAATAT+TGG + chr1_4:5289580-5289599 None:intergenic 15.0%
!!! ATTCAAGTTAGTTTTAACAA+TGG + chr1_4:5286759-5286778 None:intergenic 20.0%
!! ATTTATTAGAACTTGAAGTT+AGG - chr1_4:5287039-5287058 Msa0145580:intron 20.0%
!!! AATCAATTGTGTTTTTAGAA+AGG - chr1_4:5287604-5287623 Msa0145580:intron 20.0%
!! AAAACTATTATGAAAACTCT+AGG - chr1_4:5287768-5287787 Msa0145580:CDS 20.0%
!! AAACTATTATGAAAACTCTA+GGG - chr1_4:5287769-5287788 Msa0145580:CDS 20.0%
!! ATCATAAAGTGAATTCAAAT+AGG - chr1_4:5287871-5287890 Msa0145580:intron 20.0%
!!! TATTTTGATAAAACTTAAGG+AGG - chr1_4:5287958-5287977 Msa0145580:CDS 20.0%
!! TTTCAATTGATATTGTTGAT+AGG - chr1_4:5289449-5289468 Msa0145580:intron 20.0%
! TAACAAAAAAAATCACACAG+TGG - chr1_4:5286397-5286416 Msa0145580:three_prime_UTR 25.0%
!! AAAATCAAGAAAAAGGGTTT+TGG + chr1_4:5286839-5286858 None:intergenic 25.0%
! TATATGTTTGATTGCACTAT+TGG + chr1_4:5287000-5287019 None:intergenic 25.0%
! TGTAAGTAAAAATAAACGTC+CGG - chr1_4:5287496-5287515 Msa0145580:intron 25.0%
! TTCTAATTCAAGCTGAAAAT+TGG + chr1_4:5287533-5287552 None:intergenic 25.0%
!!! GTTTTCCATTTAGTTTTTGT+AGG + chr1_4:5287753-5287772 None:intergenic 25.0%
!! GTTTGTAGAAATACTTTTGT+TGG - chr1_4:5287845-5287864 Msa0145580:CDS 25.0%
! ATATACAAGACTTTACCAAT+AGG + chr1_4:5288091-5288110 None:intergenic 25.0%
! TATTTGCCAAATCTATTTAG+TGG - chr1_4:5288605-5288624 Msa0145580:intron 25.0%
! ATAAAGTATAGAAAGAGAAG+CGG + chr1_4:5288812-5288831 None:intergenic 25.0%
! TATCAGCAAATGGAAAAATT+AGG + chr1_4:5288920-5288939 None:intergenic 25.0%
! ATGATTCAAATATCAGCAAA+TGG + chr1_4:5288930-5288949 None:intergenic 25.0%
! AACAAAAAAAGCTTTCTAAG+AGG + chr1_4:5288997-5289016 None:intergenic 25.0%
!!! AAATAGAGTATTTTGCTTGA+GGG + chr1_4:5289085-5289104 None:intergenic 25.0%
! TCAAGCAAAATACTCTATTT+GGG - chr1_4:5289085-5289104 Msa0145580:intron 25.0%
! AAGAGATTTAATGGAAAGAA+AGG - chr1_4:5289317-5289336 Msa0145580:intron 25.0%
! AAAATATGACAGCAAAATCT+TGG + chr1_4:5289432-5289451 None:intergenic 25.0%
! TTGATAAAAAGTTGAATCAG+TGG + chr1_4:5289544-5289563 None:intergenic 25.0%
!! CAAAGCTGATTTAGTTAAAT+TGG - chr1_4:5289840-5289859 Msa0145580:CDS 25.0%
! GCTAATGAACAAATGAAATA+AGG + chr1_4:5289902-5289921 None:intergenic 25.0%
GGAAGATTGATATACCAAAT+CGG + chr1_4:5286453-5286472 None:intergenic 30.0%
AGAAGCTTCTTGTTAAATAC+TGG - chr1_4:5286594-5286613 Msa0145580:three_prime_UTR 30.0%
! TTTTACGAGATTACACGAAT+TGG - chr1_4:5286653-5286672 Msa0145580:CDS 30.0%
!!! AAGAAAAAGGGTTTTGGATT+GGG + chr1_4:5286833-5286852 None:intergenic 30.0%
!! AAAGTTAGTTGATTTGCTTG+CGG - chr1_4:5286897-5286916 Msa0145580:intron 30.0%
! AAGCTCAAAATAGTGGTTTT+AGG + chr1_4:5287297-5287316 None:intergenic 30.0%
! TTCTAAGAAGCTCAAAATAG+TGG + chr1_4:5287304-5287323 None:intergenic 30.0%
CTTAGAAATCAGTCAAATCA+CGG - chr1_4:5287317-5287336 Msa0145580:CDS 30.0%
AGCAAATTAACCAAGTGTAT+GGG + chr1_4:5287431-5287450 None:intergenic 30.0%
AAGCAAATTAACCAAGTGTA+TGG + chr1_4:5287432-5287451 None:intergenic 30.0%
!! GTTTTTAGAAAGGCTTTTGT+CGG - chr1_4:5287614-5287633 Msa0145580:intron 30.0%
! GACATGTAGATTTTGTAGTA+AGG - chr1_4:5287679-5287698 Msa0145580:intron 30.0%
GAAGTCCTACAAAAACTAAA+TGG - chr1_4:5287745-5287764 Msa0145580:CDS 30.0%
TCTACAAACAACAACAATCA+AGG + chr1_4:5287834-5287853 None:intergenic 30.0%
GAAGTGAAATGAAAGAACTA+AGG + chr1_4:5287913-5287932 None:intergenic 30.0%
AGTTCTTTCATTTCACTTCT+AGG - chr1_4:5287914-5287933 Msa0145580:intron 30.0%
TTTGATAAAACTTAAGGAGG+CGG - chr1_4:5287961-5287980 Msa0145580:CDS 30.0%
ACATGTGAGTTAATTCTATC+AGG - chr1_4:5287995-5288014 Msa0145580:CDS 30.0%
TAAACTAGATTCTTCTTCCA+CGG + chr1_4:5288068-5288087 None:intergenic 30.0%
! GAAGAATCTAGTTTACCTAT+TGG - chr1_4:5288073-5288092 Msa0145580:CDS 30.0%
TATCTCTTTCCTCAAATGTT+TGG + chr1_4:5288198-5288217 None:intergenic 30.0%
GGTTTCTTTCTTCATTGTAT+AGG - chr1_4:5288351-5288370 Msa0145580:CDS 30.0%
GAAGATAAAAGTTTCATGCA+AGG - chr1_4:5288439-5288458 Msa0145580:CDS 30.0%
TGCATACCACTAAATAGATT+TGG + chr1_4:5288614-5288633 None:intergenic 30.0%
AAATCTATTTAGTGGTATGC+AGG - chr1_4:5288613-5288632 Msa0145580:intron 30.0%
!! ATAATGGATTTGTTGGAAAG+TGG - chr1_4:5288705-5288724 Msa0145580:intron 30.0%
! ATCTTCCTTTTTCTGATCAA+AGG - chr1_4:5288747-5288766 Msa0145580:intron 30.0%
TTCAACCTTTGATCAGAAAA+AGG + chr1_4:5288755-5288774 None:intergenic 30.0%
! TTTTCTGATCAAAGGTTGAA+TGG - chr1_4:5288755-5288774 Msa0145580:intron 30.0%
CATCAAAGATGTAATACCTT+GGG + chr1_4:5288788-5288807 None:intergenic 30.0%
TAAAGTATAGAAAGAGAAGC+GGG + chr1_4:5288811-5288830 None:intergenic 30.0%
!! CAAATAGAGTATTTTGCTTG+AGG + chr1_4:5289086-5289105 None:intergenic 30.0%
CTCAAGCAAAATACTCTATT+TGG - chr1_4:5289084-5289103 Msa0145580:intron 30.0%
CTGAATCAATACAGAAAAGA+TGG - chr1_4:5289281-5289300 Msa0145580:intron 30.0%
! CACATCAATAGATTAGTTAG+TGG + chr1_4:5289657-5289676 None:intergenic 30.0%
TAACTAAATCAGCTTTGCAA+TGG + chr1_4:5289837-5289856 None:intergenic 30.0%
TAAGTTAGAAAACTACAGCT+AGG + chr1_4:5289877-5289896 None:intergenic 30.0%
TTCATTAGCCAATTCAAATC+AGG - chr1_4:5289913-5289932 Msa0145580:CDS 30.0%
! CACATATACCTGATTTGAAT+TGG + chr1_4:5289924-5289943 None:intergenic 30.0%
! TTTGTTATAAACACTGCCTC+TGG + chr1_4:5286384-5286403 None:intergenic 35.0%
CAAAAAAAATCACACAGTGG+CGG - chr1_4:5286400-5286419 Msa0145580:three_prime_UTR 35.0%
TACCGAGTTTCTTTCGTTTA+CGG + chr1_4:5286559-5286578 None:intergenic 35.0%
TAAAAGAGTAAAAACGCAGC+TGG + chr1_4:5286638-5286657 None:intergenic 35.0%
!!! AGAAAAAGGGTTTTGGATTG+GGG + chr1_4:5286832-5286851 None:intergenic 35.0%
!!! CAAGAAAAAGGGTTTTGGAT+TGG + chr1_4:5286834-5286853 None:intergenic 35.0%
! ACTAGAATTGATTCTTGACG+CGG + chr1_4:5286968-5286987 None:intergenic 35.0%
!! TGCCTTTCAACTCACTTTTA+TGG - chr1_4:5287111-5287130 Msa0145580:intron 35.0%
! CTCCATAAAAGTGAGTTGAA+AGG + chr1_4:5287116-5287135 None:intergenic 35.0%
ATGCATTGAGAAGTGACAAT+GGG + chr1_4:5287170-5287189 None:intergenic 35.0%
!! ACAAACAGAGCATTGAATCA+CGG + chr1_4:5287240-5287259 None:intergenic 35.0%
AAATCACGGTAATTGAGCAT+TGG - chr1_4:5287331-5287350 Msa0145580:CDS 35.0%
AATCACGGTAATTGAGCATT+GGG - chr1_4:5287332-5287351 Msa0145580:CDS 35.0%
TCATTGTTAACCCATACACT+TGG - chr1_4:5287418-5287437 Msa0145580:CDS 35.0%
!! ACACTTGGTTAATTTGCTTG+CGG - chr1_4:5287433-5287452 Msa0145580:intron 35.0%
!! AAAATTGGAGCTTTAGACTC+CGG + chr1_4:5287518-5287537 None:intergenic 35.0%
AGTAAGGAGAGTAAATCAGA+TGG - chr1_4:5287695-5287714 Msa0145580:intron 35.0%
! ACTCTAGGGATTAATGAGTT+TGG - chr1_4:5287783-5287802 Msa0145580:CDS 35.0%
! TCTAGTTGCTCAAGTTTTTC+AGG + chr1_4:5288040-5288059 None:intergenic 35.0%
AAACTAGATTCTTCTTCCAC+GGG + chr1_4:5288067-5288086 None:intergenic 35.0%
! ATGTCAGCGACTGATTTAAT+AGG - chr1_4:5288109-5288128 Msa0145580:intron 35.0%
TACTGGAAACCAAACATTTG+AGG - chr1_4:5288186-5288205 Msa0145580:intron 35.0%
! GGAAAGAGATAGAAGTTTTG+AGG - chr1_4:5288207-5288226 Msa0145580:intron 35.0%
!!! GATAGAAGTTTTGAGGTGAT+TGG - chr1_4:5288214-5288233 Msa0145580:intron 35.0%
ATAGGTGAAAGAAACTACGA+CGG - chr1_4:5288369-5288388 Msa0145580:CDS 35.0%
GTTGTATCTACTTGTGCATT+TGG - chr1_4:5288472-5288491 Msa0145580:intron 35.0%
GTTGAATGGTAAAATTCCCA+AGG - chr1_4:5288769-5288788 Msa0145580:intron 35.0%
GCATCAAAGATGTAATACCT+TGG + chr1_4:5288789-5288808 None:intergenic 35.0%
!! CTTGTGAGAACATTTTGGTA+GGG + chr1_4:5288894-5288913 None:intergenic 35.0%
!! TCTTGTGAGAACATTTTGGT+AGG + chr1_4:5288895-5288914 None:intergenic 35.0%
! GGAATCTTGTGAGAACATTT+TGG + chr1_4:5288899-5288918 None:intergenic 35.0%
! AGTATTTTGCTTGAGGGAAA+AGG + chr1_4:5289079-5289098 None:intergenic 35.0%
CCATTAAATCTCTTGTCTAC+AGG + chr1_4:5289311-5289330 None:intergenic 35.0%
CCTGTAGACAAGAGATTTAA+TGG - chr1_4:5289308-5289327 Msa0145580:intron 35.0%
AACAGACTAGATGAGAAGAT+TGG + chr1_4:5289506-5289525 None:intergenic 35.0%
!! TTTGCAATGGTTTTGCTTTG+CGG + chr1_4:5289824-5289843 None:intergenic 35.0%
! TAACCTATACCGATTATGAG+AGG + chr1_4:5289976-5289995 None:intergenic 35.0%
TTACTATGAGCTGTTTGAGT+AGG - chr1_4:5290013-5290032 Msa0145580:exon 35.0%
! TCCAGAAAGAGATTTTGCTT+TGG - chr1_4:5290042-5290061 Msa0145580:five_prime_UTR 35.0%
TCCAAAGCAAAATCTCTTTC+TGG + chr1_4:5290046-5290065 None:intergenic 35.0%
GTTATCGTAGAAATCTGTGT+CGG + chr1_4:5290077-5290096 None:intergenic 35.0%
AATCAATCATCCAGTTCCAG+AGG - chr1_4:5286365-5286384 Msa0145580:three_prime_UTR 40.0%
GGTTCGTTATCATTCCGATT+TGG - chr1_4:5286436-5286455 Msa0145580:three_prime_UTR 40.0%
! ACACGAATTGGTTTAAGACC+AGG - chr1_4:5286665-5286684 Msa0145580:CDS 40.0%
ATGTTGGAAGAAGAACTACC+TGG + chr1_4:5286686-5286705 None:intergenic 40.0%
TGTCGTTGTTGAAGCAATGT+TGG + chr1_4:5286702-5286721 None:intergenic 40.0%
!!! GAAAAAGGGTTTTGGATTGG+GGG + chr1_4:5286831-5286850 None:intergenic 40.0%
TATGGAGATGCGTGTATGTT+TGG - chr1_4:5287129-5287148 Msa0145580:intron 40.0%
AGATGCGTGTATGTTTGGAT+TGG - chr1_4:5287134-5287153 Msa0145580:intron 40.0%
CATGCATTGAGAAGTGACAA+TGG + chr1_4:5287171-5287190 None:intergenic 40.0%
! TTGTCACTTCTCAATGCATG+TGG - chr1_4:5287171-5287190 Msa0145580:CDS 40.0%
! TGTCACTTCTCAATGCATGT+GGG - chr1_4:5287172-5287191 Msa0145580:CDS 40.0%
!! CAATGCTCTGTTTGTTTCTG+CGG - chr1_4:5287245-5287264 Msa0145580:CDS 40.0%
!! CACTTGGTTAATTTGCTTGC+GGG - chr1_4:5287434-5287453 Msa0145580:intron 40.0%
GACATGTTTGAATGCTTTCG+TGG + chr1_4:5287582-5287601 None:intergenic 40.0%
! GAGAAGACCTGTATGTTTTG+TGG - chr1_4:5287645-5287664 Msa0145580:intron 40.0%
! GACCTGTATGTTTTGTGGTA+AGG - chr1_4:5287650-5287669 Msa0145580:intron 40.0%
CTCCTTACCACAAAACATAC+AGG + chr1_4:5287655-5287674 None:intergenic 40.0%
AAGGAGAGTAAATCAGATGG+AGG - chr1_4:5287698-5287717 Msa0145580:intron 40.0%
AGGAGAGTAAATCAGATGGA+GGG - chr1_4:5287699-5287718 Msa0145580:intron 40.0%
GAGGGTAGTTAAATCACTAG+AGG - chr1_4:5287717-5287736 Msa0145580:CDS 40.0%
AGTTAAATCACTAGAGGCAG+AGG - chr1_4:5287723-5287742 Msa0145580:CDS 40.0%
! TTCACTTCTAGGAATGAGTG+AGG - chr1_4:5287925-5287944 Msa0145580:intron 40.0%
!!! AGTTGCTCAAGTTTTTCAGG+TGG + chr1_4:5288037-5288056 None:intergenic 40.0%
! TCAGCGACTGATTTAATAGG+AGG - chr1_4:5288112-5288131 Msa0145580:intron 40.0%
! CAGCGACTGATTTAATAGGA+GGG - chr1_4:5288113-5288132 Msa0145580:intron 40.0%
TTTCATGCAAGGTTGCAAAG+TGG - chr1_4:5288450-5288469 Msa0145580:CDS 40.0%
GTATCTACTTGTGCATTTGG+TGG - chr1_4:5288475-5288494 Msa0145580:intron 40.0%
GATGATCTCTATCAACCGAT+TGG - chr1_4:5288502-5288521 Msa0145580:intron 40.0%
!! AGGTTTGCTATGTAGCATTC+TGG - chr1_4:5288633-5288652 Msa0145580:intron 40.0%
!! GGTTTGCTATGTAGCATTCT+GGG - chr1_4:5288634-5288653 Msa0145580:intron 40.0%
! TGAAATCACACTAAAAGCGC+AGG - chr1_4:5288658-5288677 Msa0145580:intron 40.0%
! ACTAAAAGCGCAGGAATTAG+TGG - chr1_4:5288667-5288686 Msa0145580:intron 40.0%
! CTAAAAGCGCAGGAATTAGT+GGG - chr1_4:5288668-5288687 Msa0145580:intron 40.0%
!! GTTGGGGATAATGGATTTGT+TGG - chr1_4:5288698-5288717 Msa0145580:intron 40.0%
TGTTGTCTTCATTAACCCCA+TGG - chr1_4:5288962-5288981 Msa0145580:intron 40.0%
GTTGTCTTCATTAACCCCAT+GGG - chr1_4:5288963-5288982 Msa0145580:intron 40.0%
TTGTCTTCATTAACCCCATG+GGG - chr1_4:5288964-5288983 Msa0145580:intron 40.0%
!!! TTTCCTTTTTCAACCACGTG+TGG - chr1_4:5289022-5289041 Msa0145580:intron 40.0%
!!! TTCCTTTTTCAACCACGTGT+GGG - chr1_4:5289023-5289042 Msa0145580:intron 40.0%
TAGACTCCAAGTCCCAATTT+AGG - chr1_4:5289108-5289127 Msa0145580:intron 40.0%
GTACTTGCCATATCAGAACA+TGG - chr1_4:5289179-5289198 Msa0145580:intron 40.0%
TCGTAGTAGTGTCTATGATG+AGG - chr1_4:5289205-5289224 Msa0145580:intron 40.0%
TAGTGTCTATGATGAGGCTA+AGG - chr1_4:5289211-5289230 Msa0145580:intron 40.0%
!!! CGCTTTGTTTTTCCTGACAA+CGG + chr1_4:5289237-5289256 None:intergenic 40.0%
CTAATCTATTGATGTGCGTC+TGG - chr1_4:5289661-5289680 Msa0145580:intron 40.0%
AAGGATCTGGTCAATAGCAT+GGG - chr1_4:5289792-5289811 Msa0145580:CDS 40.0%
TCTTCCTCTCCTCTCATAAT+CGG - chr1_4:5289964-5289983 Msa0145580:CDS 40.0%
! TATACCGATTATGAGAGGAG+AGG + chr1_4:5289971-5289990 None:intergenic 40.0%
TCTCCTCTCATAATCGGTAT+AGG - chr1_4:5289970-5289989 Msa0145580:CDS 40.0%
!! ATAAACACTGCCTCTGGAAC+TGG + chr1_4:5286378-5286397 None:intergenic 45.0%
! AGTGTTGCTGTGGAACATTG+AGG + chr1_4:5286474-5286493 None:intergenic 45.0%
!! TAGTTCATCGGTTTCGTCGT+CGG + chr1_4:5286513-5286532 None:intergenic 45.0%
CGCCGTAAACGAAAGAAACT+CGG - chr1_4:5286554-5286573 Msa0145580:three_prime_UTR 45.0%
CCAGCAACAACATGAGTAGT+AGG + chr1_4:5286791-5286810 None:intergenic 45.0%
CCTACTACTCATGTTGTTGC+TGG - chr1_4:5286788-5286807 Msa0145580:CDS 45.0%
TGTGTGTGTGTGTGTGTGTT+TGG - chr1_4:5286937-5286956 Msa0145580:intron 45.0%
!! GTGTATGTTTGGATTGGCCA+TGG - chr1_4:5287140-5287159 Msa0145580:intron 45.0%
AAGTGACAATGGGTGATCCA+TGG + chr1_4:5287160-5287179 None:intergenic 45.0%
ACCAAACCAAACAGCCACTT+CGG - chr1_4:5287377-5287396 Msa0145580:CDS 45.0%
ATTGTCTCAATTGCGTGCAG+AGG - chr1_4:5288144-5288163 Msa0145580:intron 45.0%
!!! TGCTACTTGTTTTGCCCTAC+TGG - chr1_4:5288284-5288303 Msa0145580:CDS 45.0%
ACAACCAAGCGTATCCAGTA+GGG + chr1_4:5288301-5288320 None:intergenic 45.0%
TACAACCAAGCGTATCCAGT+AGG + chr1_4:5288302-5288321 None:intergenic 45.0%
AAACTACGACGGCACATTGT+GGG - chr1_4:5288380-5288399 Msa0145580:CDS 45.0%
! TCTACTTGTGCATTTGGTGG+CGG - chr1_4:5288478-5288497 Msa0145580:intron 45.0%
TCAACCGATTGGAATGTCAG+AGG - chr1_4:5288513-5288532 Msa0145580:intron 45.0%
GAAGCCTCTGACATTCCAAT+CGG + chr1_4:5288520-5288539 None:intergenic 45.0%
GTCAGAGGCTTCACTTAAGA+AGG - chr1_4:5288528-5288547 Msa0145580:intron 45.0%
! AATTAGTGGGTCGCAGAGTT+GGG - chr1_4:5288681-5288700 Msa0145580:intron 45.0%
TGTCTTCATTAACCCCATGG+GGG - chr1_4:5288965-5288984 Msa0145580:intron 45.0%
!! TAAGAGGAAAGTACCCCCAT+GGG + chr1_4:5288981-5289000 None:intergenic 45.0%
ACTCCAAGTCCCAATTTAGG+AGG - chr1_4:5289111-5289130 Msa0145580:intron 45.0%
CTCCAAGTCCCAATTTAGGA+GGG - chr1_4:5289112-5289131 Msa0145580:intron 45.0%
! TAGTGGGTCCCTCCTAAATT+GGG + chr1_4:5289123-5289142 None:intergenic 45.0%
ACGAGCTCCATGTTCTGATA+TGG + chr1_4:5289189-5289208 None:intergenic 45.0%
GAAAAACAAAGCGAAGCCAG+AGG - chr1_4:5289244-5289263 Msa0145580:intron 45.0%
AGTTGCACTTCAACTTCCTC+TGG + chr1_4:5289263-5289282 None:intergenic 45.0%
ATGCTTCCTGACGATAACAG+AGG + chr1_4:5289631-5289650 None:intergenic 45.0%
! GATGTGCGTCTGGTTTAATG+AGG - chr1_4:5289671-5289690 Msa0145580:intron 45.0%
TCAGCTTCCCATATGTTCTG+TGG - chr1_4:5289721-5289740 Msa0145580:CDS 45.0%
TCAACCGCCACAGAACATAT+GGG + chr1_4:5289731-5289750 None:intergenic 45.0%
TTCAACCGCCACAGAACATA+TGG + chr1_4:5289732-5289751 None:intergenic 45.0%
CAAGGATCTGGTCAATAGCA+TGG - chr1_4:5289791-5289810 Msa0145580:CDS 45.0%
!!! TATTTTGATTTAAAAAATAT+CGG + chr1_4:5290101-5290120 None:intergenic 5.0%
AGTGGCGGCAGACAGTTATA+AGG - chr1_4:5286415-5286434 Msa0145580:three_prime_UTR 50.0%
!! AGATCGGTAGAGTGTTGCTG+TGG + chr1_4:5286484-5286503 None:intergenic 50.0%
TCGTCGTCGGAGATTGAGAT+CGG + chr1_4:5286500-5286519 None:intergenic 50.0%
GACGACGAAACCGATGAACT+AGG - chr1_4:5286512-5286531 Msa0145580:three_prime_UTR 50.0%
GCGCATTCGACCTAGTTCAT+CGG + chr1_4:5286525-5286544 None:intergenic 50.0%
ACCAAGCACAGACGCACATT+CGG - chr1_4:5287271-5287290 Msa0145580:CDS 50.0%
!! TGGCTGTTTGGTTTGGTGGT+GGG + chr1_4:5287374-5287393 None:intergenic 50.0%
!! GAAGTGGCTGTTTGGTTTGG+TGG + chr1_4:5287378-5287397 None:intergenic 50.0%
CCAAACCAAACAGCCACTTC+GGG - chr1_4:5287378-5287397 Msa0145580:CDS 50.0%
GACAGAATTGCATCCCGAAG+TGG + chr1_4:5287394-5287413 None:intergenic 50.0%
TGAGCAACTAGAGATTCCCG+TGG - chr1_4:5288048-5288067 Msa0145580:CDS 50.0%
TTTGCCCTACTGGATACGCT+TGG - chr1_4:5288294-5288313 Msa0145580:CDS 50.0%
GAAACTACGACGGCACATTG+TGG - chr1_4:5288379-5288398 Msa0145580:CDS 50.0%
TGTGGGTTCTACAGTGCGAA+TGG - chr1_4:5288397-5288416 Msa0145580:CDS 50.0%
GGTTCTACAGTGCGAATGGT+GGG - chr1_4:5288401-5288420 Msa0145580:CDS 50.0%
!! ACAGTGCGAATGGTGGGTTT+AGG - chr1_4:5288407-5288426 Msa0145580:CDS 50.0%
! GAATTAGTGGGTCGCAGAGT+TGG - chr1_4:5288680-5288699 Msa0145580:intron 50.0%
! ATTAGTGGGTCGCAGAGTTG+GGG - chr1_4:5288682-5288701 Msa0145580:intron 50.0%
! GTGGCGTGTTATTGTCGTTC+AGG - chr1_4:5288724-5288743 Msa0145580:intron 50.0%
!! AAGAGGAAAGTACCCCCATG+GGG + chr1_4:5288980-5288999 None:intergenic 50.0%
!! CTAAGAGGAAAGTACCCCCA+TGG + chr1_4:5288982-5289001 None:intergenic 50.0%
AGCCCACACGTGGTTGAAAA+AGG + chr1_4:5289028-5289047 None:intergenic 50.0%
! TTTTCAACCACGTGTGGGCT+TGG - chr1_4:5289028-5289047 Msa0145580:intron 50.0%
AAGATATCCAAGCCCACACG+TGG + chr1_4:5289038-5289057 None:intergenic 50.0%
TTGCTTGAGGGAAAAGGCGA+TGG + chr1_4:5289073-5289092 None:intergenic 50.0%
GTCCCTCCTAAATTGGGACT+TGG + chr1_4:5289117-5289136 None:intergenic 50.0%
! CTAGTGGGTCCCTCCTAAAT+TGG + chr1_4:5289124-5289143 None:intergenic 50.0%
CAATTTAGGAGGGACCCACT+AGG - chr1_4:5289122-5289141 Msa0145580:intron 50.0%
GTACAGAACTTGTGCGCCAA+AGG + chr1_4:5289163-5289182 None:intergenic 50.0%
GTGAAGCCTCTGTTATCGTC+AGG - chr1_4:5289622-5289641 Msa0145580:intron 50.0%
! GTGCGTCTGGTTTAATGAGG+TGG - chr1_4:5289674-5289693 Msa0145580:intron 50.0%
GCTTCCCATATGTTCTGTGG+CGG - chr1_4:5289724-5289743 Msa0145580:CDS 50.0%
ATGAGAGGAGAGGAAGAGAG+AGG + chr1_4:5289961-5289980 None:intergenic 50.0%
!! GTGGCTGTTTGGTTTGGTGG+TGG + chr1_4:5287375-5287394 None:intergenic 55.0%
CCCGAAGTGGCTGTTTGGTT+TGG + chr1_4:5287381-5287400 None:intergenic 55.0%
TGCATCCCGAAGTGGCTGTT+TGG + chr1_4:5287386-5287405 None:intergenic 55.0%
GGGTTCTACAGTGCGAATGG+TGG - chr1_4:5288400-5288419 Msa0145580:CDS 55.0%
GGTCGCAGAGTTGGGGATAA+TGG - chr1_4:5288689-5288708 Msa0145580:intron 55.0%
GCGCTTCCAACACACCTAGT+GGG + chr1_4:5289139-5289158 None:intergenic 55.0%
AGCGCTTCCAACACACCTAG+TGG + chr1_4:5289140-5289159 None:intergenic 55.0%
!! GTGTGTTGGAAGCGCTCCTT+TGG - chr1_4:5289144-5289163 Msa0145580:intron 55.0%
ATGAGGCTAAGGCCGTTGTC+AGG - chr1_4:5289222-5289241 Msa0145580:intron 55.0%
AGGTGGTTCGCTTCACGTCT+AGG - chr1_4:5289691-5289710 Msa0145580:CDS 55.0%
GGTGGTTCGCTTCACGTCTA+GGG - chr1_4:5289692-5289711 Msa0145580:CDS 55.0%
GATCCTTGCGAGTGCAGACA+GGG + chr1_4:5289779-5289798 None:intergenic 55.0%
AGATCCTTGCGAGTGCAGAC+AGG + chr1_4:5289780-5289799 None:intergenic 55.0%
TGTCTGCACTCGCAAGGATC+TGG - chr1_4:5289779-5289798 Msa0145580:CDS 55.0%
GCCGAATGTGCGTCTGTGCT+TGG + chr1_4:5287275-5287294 None:intergenic 60.0%
GAGGGACCCACTAGGTGTGT+TGG - chr1_4:5289130-5289149 Msa0145580:intron 60.0%
GTTCCCTGTCTGCACTCGCA+AGG - chr1_4:5289773-5289792 Msa0145580:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 5286361 5290138 5286361 ID=Msa0145580;Name=Msa0145580
chr1_4 mRNA 5286361 5290138 5286361 ID=Msa0145580-mRNA-1;Parent=Msa0145580;Name=Msa0145580-mRNA-1;_AED=0.07;_eAED=0.07;_QI=115|1|1|1|1|1|6|290|466
chr1_4 exon 5286361 5286883 5286361 ID=Msa0145580-mRNA-1:exon:2223;Parent=Msa0145580-mRNA-1
chr1_4 exon 5287161 5287437 5287161 ID=Msa0145580-mRNA-1:exon:2222;Parent=Msa0145580-mRNA-1
chr1_4 exon 5287709 5287864 5287709 ID=Msa0145580-mRNA-1:exon:2221;Parent=Msa0145580-mRNA-1
chr1_4 exon 5287950 5288126 5287950 ID=Msa0145580-mRNA-1:exon:2220;Parent=Msa0145580-mRNA-1
chr1_4 exon 5288271 5288482 5288271 ID=Msa0145580-mRNA-1:exon:2219;Parent=Msa0145580-mRNA-1
chr1_4 exon 5289678 5290138 5289678 ID=Msa0145580-mRNA-1:exon:2218;Parent=Msa0145580-mRNA-1
chr1_4 five_prime_UTR 5290024 5290138 5290024 ID=Msa0145580-mRNA-1:five_prime_utr;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5289678 5290023 5289678 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5288271 5288482 5288271 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5287950 5288126 5287950 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5287709 5287864 5287709 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5287161 5287437 5287161 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 CDS 5286651 5286883 5286651 ID=Msa0145580-mRNA-1:cds;Parent=Msa0145580-mRNA-1
chr1_4 three_prime_UTR 5286361 5286650 5286361 ID=Msa0145580-mRNA-1:three_prime_utr;Parent=Msa0145580-mRNA-1
Gene Sequence

>Msa0145580

ATGTTCCACAGCAACACTCTACCGATCTCAATCTCCGACGACGAAACCGATGAACTAGGTCGAATGCGCGTTCGTGCTCGCCGTAAACGAAAGAAACTCGGTAACAAACGTTTCTTCAAGAAGCTTCTTGTTAAATACTGGATGCTACTCATCATTATTCCAGCTGCGTTTTTACTCTTTTACGAGATTACACGAATTGGTTTAAGACCAGGTAGTTCTTCTTCCAACATTGCTTCAACAACGACAAATCAAGATAATCATGATCATCGATCTAAAGAGACCATTGTTAAAACTAACTTGAATCGTCTTGATCCTACTACTCATGTTGTTGCTGGTGTTAGAGAACGTTGCTTGAAGCTTCTACCACCTGAAAAACTTGAGCAACTAGAGATTCCCGTGGAAGAAGAATCTAGTTTACCTATTGGTAAAGTCTTGTATATGTCAGCGACTGATTTAATAGGAGGGAATGCTACATTGTCTCAATTGCGTGCAGAGGATACAAGTTTTAATTTATTTACTGGAAACCAAACATTTGAGGAAAGAGATAGAAGTTTTGAGGTGAAAGAAACTACGACGGCACATTGTGGGTTCTACAGTGCGAATGGTGGGTTTAGGATATCAGATGAAGATAAAAGTTTCATGCAAGGTTGCAAAGTGGTTGTATCTACTTGTGCATTTGGTGGCGGAGATGATCTCTATCAACCGATTGGAATGTCAGAGGCTTCACTTAAGAAGGTTTGCTATGTAGCATTCTGGGATGAAATCACACTAAAAGCGCAGGAATTAGTGGGTCGCAGAGTTGGGGATAATGGATTTGTTGGAAAGTGGCGTGTTATTGTCGTTCAGGATCTTCCTTTTTCTGATCAAAGGTTGAATGGTAAAATTCCCAAGATGTTAAGCCATCGCCTTTTCCCTCAAGCAAAATACTCTATTTGGGTAGACTCCAAGTCCCAATTTAGGAGGGACCCACTAGGTGTGTTGGAAGCGCTCCTTTGGCGCACAAGTTCTGTACTTGCCATATCAGAACATGGAGCTCGTAGTAGTGTCTATGATGAGGCTAAGGCCGTTGTCAGGAAAAACAAAGCGAAGCCAGAGGAAGTTGAAGTGCAACTGAATCAATACAGAAAAGATGGCATGCCTGTAGACAAGAGATTTAATGGAAAGAAAGCTCTATGTGAAGCCTCTGTTATCGTCAGGAAGCATACGCCACTAACTAATCTATTGATGTGCGTCTGGTTTAATGAGGTGGTTCGCTTCACGTCTAGGGATCAGCTCAGCTTCCCATATGTTCTGTGGCGGTTGAAAGCATTCAAAAACATTAACATGTTCCCTGTCTGCACTCGCAAGGATCTGGTCAATAGCATGGGACACATCCGCAAAGCAAAACCATTGCAAAGCTGA

Protein sequence

>Msa0145580

MFHSNTLPISISDDETDELGRMRVRARRKRKKLGNKRFFKKLLVKYWMLLIIIPAAFLLFYEITRIGLRPGSSSSNIASTTTNQDNHDHRSKETIVKTNLNRLDPTTHVVAGVRERCLKLLPPEKLEQLEIPVEEESSLPIGKVLYMSATDLIGGNATLSQLRAEDTSFNLFTGNQTFEERDRSFEVKETTTAHCGFYSANGGFRISDEDKSFMQGCKVVVSTCAFGGGDDLYQPIGMSEASLKKVCYVAFWDEITLKAQELVGRRVGDNGFVGKWRVIVVQDLPFSDQRLNGKIPKMLSHRLFPQAKYSIWVDSKSQFRRDPLGVLEALLWRTSSVLAISEHGARSSVYDEAKAVVRKNKAKPEEVEVQLNQYRKDGMPVDKRFNGKKALCEASVIVRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWRLKAFKNINMFPVCTRKDLVNSMGHIRKAKPLQS*