Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720690 | XP_003612933.1 | 95.710 | 303 | 13 | 0 | 1 | 303 | 1 | 303 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720690 | sp|Q38826|IAA8_ARATH | 67.010 | 291 | 64 | 9 | 21 | 303 | 21 | 287 | 1.02e-121 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720690 | G7KF56 | 95.710 | 303 | 13 | 0 | 1 | 303 | 1 | 303 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0720690 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027890 | Msa0720690 | 0.800337 | 1.510907e-48 | -8.615850e-47 |
| Msa0036140 | Msa0720690 | 0.811469 | 6.891932e-51 | -8.615850e-47 |
| Msa0043560 | Msa0720690 | 0.800113 | 1.678427e-48 | -8.615850e-47 |
| Msa0044000 | Msa0720690 | 0.800941 | 1.137818e-48 | -8.615850e-47 |
| Msa0051020 | Msa0720690 | 0.840648 | 7.661769e-58 | -8.615850e-47 |
| Msa0061340 | Msa0720690 | 0.804370 | 2.232013e-49 | -8.615850e-47 |
| Msa0072720 | Msa0720690 | 0.811199 | 7.890701e-51 | -8.615850e-47 |
| Msa0084080 | Msa0720690 | 0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0101270 | Msa0720690 | 0.842157 | 3.069683e-58 | -8.615850e-47 |
| Msa0602870 | Msa0720690 | 0.820422 | 6.918744e-53 | -8.615850e-47 |
| Msa0642970 | Msa0720690 | 0.808396 | 3.161172e-50 | -8.615850e-47 |
| Msa0643890 | Msa0720690 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa0663810 | Msa0720690 | 0.809699 | 1.662822e-50 | -8.615850e-47 |
| Msa0677530 | Msa0720690 | 0.810553 | 1.088381e-50 | -8.615850e-47 |
| Msa0682680 | Msa0720690 | 0.831499 | 1.612962e-55 | -8.615850e-47 |
| Msa0683730 | Msa0720690 | 0.816745 | 4.719404e-52 | -8.615850e-47 |
| Msa0709270 | Msa0720690 | 0.820682 | 6.030401e-53 | -8.615850e-47 |
| Msa0720690 | Msa0725000 | 0.806555 | 7.771508e-50 | -8.615850e-47 |
| Msa0720690 | Msa0729720 | 0.815591 | 8.546862e-52 | -8.615850e-47 |
| Msa0720690 | Msa0740510 | 0.825266 | 5.149321e-54 | -8.615850e-47 |
| Msa0720690 | Msa0756460 | 0.808016 | 3.810097e-50 | -8.615850e-47 |
| Msa0720690 | Msa0761270 | 0.857562 | 1.500245e-62 | -8.615850e-47 |
| Msa0720690 | Msa0763890 | 0.803293 | 3.735658e-49 | -8.615850e-47 |
| Msa0720690 | Msa0763920 | 0.807138 | 5.851187e-50 | -8.615850e-47 |
| Msa0720690 | Msa0784480 | 0.816645 | 4.971237e-52 | -8.615850e-47 |
| Msa0720690 | Msa0803730 | 0.841919 | 3.547381e-58 | -8.615850e-47 |
| Msa0720690 | Msa0818060 | 0.816460 | 5.466597e-52 | -8.615850e-47 |
| Msa0720690 | Msa0820770 | 0.822307 | 2.540585e-53 | -8.615850e-47 |
| Msa0720690 | Msa0832340 | 0.858301 | 9.049590e-63 | -8.615850e-47 |
| Msa0720690 | Msa0837600 | 0.800871 | 1.176124e-48 | -8.615850e-47 |
| Msa0720690 | Msa0841820 | 0.868836 | 4.854059e-66 | -8.615850e-47 |
| Msa0720690 | Msa0845110 | 0.803107 | 4.082663e-49 | -8.615850e-47 |
| Msa0720690 | Msa0847150 | 0.805622 | 1.221535e-49 | -8.615850e-47 |
| Msa0720690 | Msa0861090 | 0.825297 | 5.061769e-54 | -8.615850e-47 |
| Msa0720690 | Msa0861540 | 0.832841 | 7.508543e-56 | -8.615850e-47 |
| Msa0720690 | Msa0878510 | 0.818836 | 1.592215e-52 | -8.615850e-47 |
| Msa0720690 | Msa0924470 | 0.808011 | 3.819821e-50 | -8.615850e-47 |
| Msa0720690 | Msa0933760 | 0.807540 | 4.808557e-50 | -8.615850e-47 |
| Msa0720690 | Msa0934140 | 0.808778 | 2.620285e-50 | -8.615850e-47 |
| Msa0720690 | Msa0980140 | 0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0720690 | Msa0980200 | 0.803267 | 3.782440e-49 | -8.615850e-47 |
| Msa0720690 | Msa0986510 | 0.802295 | 6.004649e-49 | -8.615850e-47 |
| Msa0720690 | Msa0997970 | 0.816322 | 5.871567e-52 | -8.615850e-47 |
| Msa0720690 | Msa1002850 | 0.806502 | 7.975433e-50 | -8.615850e-47 |
| Msa0720690 | Msa1002960 | 0.802171 | 6.367733e-49 | -8.615850e-47 |
| Msa0720690 | Msa1023500 | 0.800658 | 1.300103e-48 | -8.615850e-47 |
| Msa0720690 | Msa1034500 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0720690 | Msa1046280 | 0.834463 | 2.953738e-56 | -8.615850e-47 |
| Msa0720690 | Msa1059960 | 0.803881 | 2.820790e-49 | -8.615850e-47 |
| Msa0720690 | Msa1080270 | 0.819267 | 1.270647e-52 | -8.615850e-47 |
| Msa0720690 | Msa1089450 | 0.816784 | 4.625197e-52 | -8.615850e-47 |
| Msa0720690 | Msa1095650 | 0.803147 | 4.004521e-49 | -8.615850e-47 |
| Msa0720690 | Msa1101090 | 0.838716 | 2.436932e-57 | -8.615850e-47 |
| Msa0720690 | Msa1105160 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0720690 | Msa1128600 | 0.829899 | 3.975893e-55 | -8.615850e-47 |
| Msa0720690 | Msa1142670 | 0.805604 | 1.232322e-49 | -8.615850e-47 |
| Msa0720690 | Msa1144450 | 0.809780 | 1.597776e-50 | -8.615850e-47 |
| Msa0720690 | Msa1188710 | 0.827162 | 1.821560e-54 | -8.615850e-47 |
| Msa0720690 | Msa1189070 | 0.816295 | 5.952663e-52 | -8.615850e-47 |
| Msa0720690 | Msa1190920 | 0.815779 | 7.760477e-52 | -8.615850e-47 |
| Msa0720690 | Msa1199570 | 0.812161 | 4.873363e-51 | -8.615850e-47 |
| Msa0720690 | Msa1226460 | 0.815774 | 7.781198e-52 | -8.615850e-47 |
| Msa0720690 | Msa1228040 | 0.800559 | 1.361855e-48 | -8.615850e-47 |
| Msa0720690 | Msa1232740 | 0.806058 | 9.890619e-50 | -8.615850e-47 |
| Msa0720690 | Msa1250530 | 0.829685 | 4.483030e-55 | -8.615850e-47 |
| Msa0720690 | Msa1271130 | 0.818715 | 1.696123e-52 | -8.615850e-47 |
| Msa0720690 | Msa1276150 | 0.800142 | 1.655816e-48 | -8.615850e-47 |
| Msa0720690 | Msa1284550 | 0.813398 | 2.612567e-51 | -8.615850e-47 |
| Msa0720690 | Msa1285550 | 0.826529 | 2.580787e-54 | -8.615850e-47 |
| Msa0720690 | Msa1286800 | 0.824833 | 6.515130e-54 | -8.615850e-47 |
| Msa0720690 | Msa1287220 | 0.802122 | 6.517482e-49 | -8.615850e-47 |
| Msa0720690 | Msa1289000 | 0.814927 | 1.200858e-51 | -8.615850e-47 |
| Msa0720690 | Msa1297530 | 0.800919 | 1.149812e-48 | -8.615850e-47 |
| Msa0720690 | Msa1308220 | 0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0720690 | Msa1313320 | 0.800152 | 1.647590e-48 | -8.615850e-47 |
| Msa0720690 | Msa1328640 | 0.800269 | 1.560030e-48 | -8.615850e-47 |
| Msa0720690 | Msa1328710 | 0.812909 | 3.344077e-51 | -8.615850e-47 |
| Msa0720690 | Msa1330170 | 0.811835 | 5.738105e-51 | -8.615850e-47 |
| Msa0720690 | Msa1333480 | 0.814408 | 1.563958e-51 | -8.615850e-47 |
| Msa0720690 | Msa1353470 | 0.803959 | 2.717622e-49 | -8.615850e-47 |
| Msa0720690 | Msa1355450 | 0.804501 | 2.096228e-49 | -8.615850e-47 |
| Msa0720690 | Msa1360440 | 0.822112 | 2.819709e-53 | -8.615850e-47 |
| Msa0720690 | Msa1371520 | 0.801734 | 7.830435e-49 | -8.615850e-47 |
| Msa0720690 | Msa1381350 | 0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0720690 | Msa1418240 | 0.800479 | 1.413520e-48 | -8.615850e-47 |
| Msa0720690 | Msa1435270 | 0.809137 | 2.195505e-50 | -8.615850e-47 |
| Msa0720690 | Msa1442920 | 0.809677 | 1.681096e-50 | -8.615850e-47 |
| Msa0720690 | Msa1451160 | 0.813163 | 2.940749e-51 | -8.615850e-47 |
| Msa0720690 | Msa1458680 | 0.805613 | 1.226751e-49 | -8.615850e-47 |
| Msa0720690 | Msa1462290 | 0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0720690 | Msa1465300 | 0.812879 | 3.394689e-51 | -8.615850e-47 |
| Msa0127800 | Msa0720690 | 0.805272 | 1.445872e-49 | -8.615850e-47 |
| Msa0138360 | Msa0720690 | 0.802658 | 5.053200e-49 | -8.615850e-47 |
| Msa0145580 | Msa0720690 | 0.840610 | 7.838327e-58 | -8.615850e-47 |
| Msa0152400 | Msa0720690 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0173800 | Msa0720690 | 0.823032 | 1.722548e-53 | -8.615850e-47 |
| Msa0196380 | Msa0720690 | 0.838962 | 2.106004e-57 | -8.615850e-47 |
| Msa0204960 | Msa0720690 | 0.842908 | 1.939906e-58 | -8.615850e-47 |
| Msa0211150 | Msa0720690 | 0.803964 | 2.710758e-49 | -8.615850e-47 |
| Msa0212990 | Msa0720690 | 0.800719 | 1.263309e-48 | -8.615850e-47 |
| Msa0214550 | Msa0720690 | 0.809689 | 1.670960e-50 | -8.615850e-47 |
| Msa0225100 | Msa0720690 | 0.813122 | 3.002640e-51 | -8.615850e-47 |
| Msa0376350 | Msa0720690 | 0.802360 | 5.822323e-49 | -8.615850e-47 |
| Msa0376630 | Msa0720690 | 0.809696 | 1.665266e-50 | -8.615850e-47 |
| Msa0393080 | Msa0720690 | 0.801231 | 9.925821e-49 | -8.615850e-47 |
| Msa0406770 | Msa0720690 | 0.815419 | 9.334831e-52 | -8.615850e-47 |
| Msa0425170 | Msa0720690 | 0.803005 | 4.284251e-49 | -8.615850e-47 |
| Msa0427120 | Msa0720690 | 0.804902 | 1.728635e-49 | -8.615850e-47 |
| Msa0440510 | Msa0720690 | 0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0440750 | Msa0720690 | 0.816603 | 5.078865e-52 | -8.615850e-47 |
| Msa0450400 | Msa0720690 | -0.805341 | 1.398954e-49 | -8.615850e-47 |
| Msa0452710 | Msa0720690 | 0.817472 | 3.240044e-52 | -8.615850e-47 |
| Msa0453350 | Msa0720690 | 0.819799 | 9.604645e-53 | -8.615850e-47 |
| Msa0473500 | Msa0720690 | 0.803427 | 3.504646e-49 | -8.615850e-47 |
| Msa0476680 | Msa0720690 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0240900 | Msa0720690 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
| Msa0249580 | Msa0720690 | 0.802541 | 5.341603e-49 | -8.615850e-47 |
| Msa0257490 | Msa0720690 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
| Msa0266180 | Msa0720690 | 0.804271 | 2.339972e-49 | -8.615850e-47 |
| Msa0270960 | Msa0720690 | 0.803447 | 3.471654e-49 | -8.615850e-47 |
| Msa0281530 | Msa0720690 | 0.841053 | 6.000215e-58 | -8.615850e-47 |
| Msa0287740 | Msa0720690 | 0.807321 | 5.351151e-50 | -8.615850e-47 |
| Msa0287870 | Msa0720690 | 0.806380 | 8.461132e-50 | -8.615850e-47 |
| Msa0288080 | Msa0720690 | 0.829841 | 4.107235e-55 | -8.615850e-47 |
| Msa0296790 | Msa0720690 | 0.802188 | 6.314763e-49 | -8.615850e-47 |
| Msa0317970 | Msa0720690 | 0.808029 | 3.786258e-50 | -8.615850e-47 |
| Msa0326480 | Msa0720690 | 0.841960 | 3.461447e-58 | -8.615850e-47 |
| Msa0336290 | Msa0720690 | 0.804783 | 1.830294e-49 | -8.615850e-47 |
| Msa0343850 | Msa0720690 | 0.814703 | 1.345989e-51 | -8.615850e-47 |
| Msa0360210 | Msa0720690 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0363790 | Msa0720690 | 0.800483 | 1.411016e-48 | -8.615850e-47 |
| Msa0491000 | Msa0720690 | 0.806317 | 8.723705e-50 | -8.615850e-47 |
| Msa0516170 | Msa0720690 | 0.807073 | 6.040996e-50 | -8.615850e-47 |
| Msa0527190 | Msa0720690 | 0.819078 | 1.402909e-52 | -8.615850e-47 |
| Msa0542290 | Msa0720690 | 0.836420 | 9.459119e-57 | -8.615850e-47 |
| Msa0545210 | Msa0720690 | 0.812152 | 4.894989e-51 | -8.615850e-47 |
| Msa0547160 | Msa0720690 | 0.808919 | 2.444471e-50 | -8.615850e-47 |
| Msa0547890 | Msa0720690 | 0.809636 | 1.715277e-50 | -8.615850e-47 |
| Msa0556060 | Msa0720690 | 0.824174 | 9.313854e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720690 | MtrunA17_Chr5g0411501 | 95.710 | 303 | 13 | 0 | 1 | 303 | 1 | 303 | 0.0 | 608 |
| Msa0720690 | MtrunA17_Chr8g0366881 | 69.325 | 326 | 67 | 6 | 1 | 303 | 1 | 316 | 1.17e-156 | 441 |
| Msa0720690 | MtrunA17_Chr5g0428141 | 58.362 | 293 | 102 | 10 | 21 | 303 | 33 | 315 | 2.36e-97 | 290 |
| Msa0720690 | MtrunA17_Chr2g0331411 | 48.589 | 319 | 106 | 10 | 16 | 302 | 1 | 293 | 5.86e-86 | 261 |
| Msa0720690 | MtrunA17_Chr6g0486121 | 53.150 | 254 | 72 | 8 | 51 | 303 | 15 | 222 | 2.65e-77 | 236 |
| Msa0720690 | MtrunA17_Chr8g0390281 | 48.921 | 278 | 100 | 8 | 40 | 303 | 12 | 261 | 9.15e-76 | 233 |
| Msa0720690 | MtrunA17_Chr1g0190711 | 44.747 | 257 | 88 | 9 | 51 | 303 | 15 | 221 | 5.43e-52 | 171 |
| Msa0720690 | MtrunA17_Chr1g0187921 | 44.488 | 254 | 83 | 7 | 51 | 303 | 8 | 204 | 3.01e-51 | 169 |
| Msa0720690 | MtrunA17_Chr7g0260641 | 62.500 | 128 | 45 | 2 | 176 | 303 | 94 | 218 | 1.79e-48 | 162 |
| Msa0720690 | MtrunA17_Chr1g0184791 | 60.870 | 138 | 48 | 3 | 170 | 303 | 78 | 213 | 2.10e-48 | 162 |
| Msa0720690 | MtrunA17_Chr1g0184801 | 38.224 | 259 | 71 | 9 | 48 | 303 | 9 | 181 | 8.91e-41 | 140 |
| Msa0720690 | MtrunA17_Chr1g0187961 | 44.720 | 161 | 58 | 4 | 143 | 303 | 29 | 158 | 6.29e-37 | 130 |
| Msa0720690 | MtrunA17_Chr1g0166011 | 35.573 | 253 | 72 | 8 | 51 | 303 | 1 | 162 | 2.10e-35 | 126 |
| Msa0720690 | MtrunA17_Chr7g0260621 | 36.965 | 257 | 80 | 10 | 46 | 302 | 6 | 180 | 2.85e-34 | 124 |
| Msa0720690 | MtrunA17_Chr1g0183251 | 42.581 | 155 | 57 | 5 | 180 | 302 | 81 | 235 | 4.86e-26 | 103 |
| Msa0720690 | MtrunA17_Chr8g0340731 | 38.636 | 176 | 85 | 6 | 151 | 303 | 69 | 244 | 5.79e-26 | 103 |
| Msa0720690 | MtrunA17_Chr2g0330951 | 40.123 | 162 | 75 | 4 | 163 | 303 | 78 | 238 | 3.41e-25 | 101 |
| Msa0720690 | MtrunA17_Chr4g0004181 | 47.619 | 126 | 36 | 4 | 178 | 303 | 51 | 146 | 1.44e-23 | 95.1 |
| Msa0720690 | MtrunA17_Chr2g0332141 | 52.222 | 90 | 31 | 3 | 217 | 303 | 8 | 88 | 1.68e-23 | 93.2 |
| Msa0720690 | MtrunA17_Chr4g0069561 | 33.333 | 135 | 57 | 5 | 175 | 303 | 60 | 167 | 1.33e-14 | 70.9 |
| Msa0720690 | MtrunA17_Chr3g0137601 | 28.000 | 150 | 75 | 4 | 162 | 303 | 69 | 193 | 9.41e-14 | 68.9 |
| Msa0720690 | MtrunA17_Chr1g0193861 | 41.111 | 90 | 39 | 2 | 214 | 303 | 82 | 157 | 5.04e-12 | 63.5 |
| Msa0720690 | MtrunA17_Chr7g0270851 | 39.326 | 89 | 40 | 2 | 215 | 303 | 68 | 142 | 4.71e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720690 | AT2G22670.5 | 67.010 | 291 | 64 | 9 | 21 | 303 | 21 | 287 | 6.46e-123 | 355 |
| Msa0720690 | AT2G22670.2 | 67.010 | 291 | 64 | 9 | 21 | 303 | 21 | 287 | 6.46e-123 | 355 |
| Msa0720690 | AT2G22670.4 | 67.010 | 291 | 64 | 9 | 21 | 303 | 38 | 304 | 8.22e-123 | 355 |
| Msa0720690 | AT2G22670.3 | 67.010 | 291 | 64 | 9 | 21 | 303 | 21 | 287 | 1.04e-122 | 354 |
| Msa0720690 | AT2G22670.1 | 67.010 | 291 | 64 | 9 | 21 | 303 | 21 | 287 | 1.04e-122 | 354 |
| Msa0720690 | AT5G65670.1 | 57.770 | 296 | 104 | 6 | 13 | 303 | 25 | 304 | 1.41e-110 | 324 |
| Msa0720690 | AT5G65670.2 | 57.770 | 296 | 104 | 6 | 13 | 303 | 25 | 304 | 1.88e-110 | 323 |
| Msa0720690 | AT4G29080.1 | 46.535 | 303 | 115 | 8 | 16 | 303 | 3 | 273 | 4.23e-76 | 235 |
| Msa0720690 | AT4G14550.3 | 43.651 | 252 | 85 | 5 | 51 | 302 | 1 | 195 | 1.42e-55 | 179 |
| Msa0720690 | AT4G14550.1 | 43.651 | 252 | 85 | 5 | 51 | 302 | 1 | 195 | 3.09e-55 | 179 |
| Msa0720690 | AT4G14550.2 | 44.664 | 253 | 81 | 6 | 51 | 302 | 1 | 195 | 4.39e-55 | 179 |
| Msa0720690 | AT3G04730.1 | 40.075 | 267 | 82 | 6 | 51 | 303 | 2 | 204 | 2.18e-50 | 167 |
| Msa0720690 | AT1G04250.1 | 40.625 | 256 | 86 | 8 | 49 | 302 | 5 | 196 | 3.45e-49 | 163 |
| Msa0720690 | AT3G23050.2 | 41.667 | 264 | 84 | 8 | 51 | 303 | 6 | 210 | 4.24e-49 | 162 |
| Msa0720690 | AT3G23050.1 | 41.667 | 264 | 84 | 8 | 51 | 303 | 6 | 210 | 1.13e-48 | 162 |
| Msa0720690 | AT1G04240.1 | 51.938 | 129 | 41 | 4 | 175 | 303 | 58 | 165 | 1.06e-35 | 127 |
| Msa0720690 | AT1G04240.2 | 51.938 | 129 | 41 | 4 | 175 | 303 | 158 | 265 | 6.61e-35 | 128 |
| Msa0720690 | AT4G14550.4 | 40.580 | 207 | 66 | 5 | 51 | 256 | 1 | 151 | 1.97e-33 | 121 |
| Msa0720690 | AT5G43700.1 | 48.837 | 129 | 43 | 4 | 175 | 303 | 56 | 161 | 1.31e-31 | 116 |
| Msa0720690 | AT3G23030.1 | 48.837 | 129 | 34 | 3 | 175 | 303 | 54 | 150 | 1.04e-30 | 114 |
| Msa0720690 | AT3G23030.2 | 48.837 | 129 | 34 | 3 | 175 | 303 | 141 | 237 | 4.88e-30 | 114 |
| Msa0720690 | AT1G15580.1 | 43.077 | 130 | 43 | 2 | 174 | 303 | 46 | 144 | 6.39e-29 | 108 |
| Msa0720690 | AT4G28640.1 | 41.667 | 156 | 64 | 4 | 166 | 302 | 73 | 220 | 2.11e-28 | 110 |
| Msa0720690 | AT4G28640.3 | 41.667 | 156 | 64 | 4 | 166 | 302 | 73 | 220 | 2.19e-28 | 110 |
| Msa0720690 | AT4G28640.2 | 42.763 | 152 | 68 | 4 | 166 | 302 | 73 | 220 | 9.10e-28 | 109 |
| Msa0720690 | AT2G33310.3 | 43.038 | 158 | 61 | 4 | 166 | 302 | 60 | 209 | 1.39e-27 | 107 |
| Msa0720690 | AT2G33310.1 | 43.038 | 158 | 61 | 4 | 166 | 302 | 60 | 209 | 1.39e-27 | 107 |
| Msa0720690 | AT3G23050.3 | 36.866 | 217 | 69 | 7 | 51 | 256 | 6 | 165 | 6.45e-27 | 103 |
| Msa0720690 | AT1G52830.1 | 42.188 | 128 | 46 | 4 | 176 | 303 | 65 | 164 | 7.90e-27 | 104 |
| Msa0720690 | AT2G33310.2 | 43.396 | 159 | 60 | 5 | 166 | 302 | 60 | 210 | 1.19e-26 | 105 |
| Msa0720690 | AT1G04550.2 | 41.139 | 158 | 63 | 4 | 166 | 302 | 54 | 202 | 2.16e-26 | 104 |
| Msa0720690 | AT4G14560.1 | 46.875 | 128 | 38 | 3 | 176 | 303 | 50 | 147 | 2.97e-25 | 99.8 |
| Msa0720690 | AT3G15540.1 | 39.306 | 173 | 67 | 7 | 143 | 302 | 20 | 167 | 8.93e-25 | 99.0 |
| Msa0720690 | AT3G16500.1 | 40.876 | 137 | 62 | 3 | 182 | 303 | 104 | 236 | 2.86e-24 | 99.8 |
| Msa0720690 | AT3G16500.2 | 40.876 | 137 | 62 | 3 | 182 | 303 | 104 | 236 | 3.15e-24 | 99.4 |
| Msa0720690 | AT1G04100.1 | 38.095 | 147 | 63 | 4 | 183 | 303 | 95 | 239 | 9.41e-24 | 98.2 |
| Msa0720690 | AT1G51950.1 | 38.732 | 142 | 63 | 4 | 182 | 303 | 97 | 234 | 2.38e-21 | 91.7 |
| Msa0720690 | AT5G25890.1 | 38.710 | 124 | 53 | 3 | 180 | 303 | 47 | 147 | 2.07e-18 | 81.6 |
| Msa0720690 | AT3G17600.1 | 34.507 | 142 | 63 | 6 | 164 | 303 | 28 | 141 | 1.36e-17 | 79.0 |
| Msa0720690 | AT3G62100.2 | 41.573 | 89 | 37 | 2 | 215 | 303 | 82 | 155 | 2.03e-14 | 70.1 |
| Msa0720690 | AT3G62100.1 | 41.573 | 89 | 37 | 2 | 215 | 303 | 82 | 155 | 3.41e-14 | 69.7 |
| Msa0720690 | AT2G46990.2 | 38.202 | 89 | 40 | 1 | 215 | 303 | 84 | 157 | 1.45e-13 | 67.8 |
| Msa0720690 | AT2G46990.1 | 38.202 | 89 | 40 | 1 | 215 | 303 | 84 | 157 | 3.07e-13 | 67.4 |
| Msa0720690 | AT1G04550.1 | 36.842 | 114 | 51 | 3 | 166 | 258 | 54 | 167 | 6.91e-12 | 63.5 |
Find 94 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCATCATTGTTGTTCT+TGG | 0.148811 | 5_1:+16824220 | None:intergenic |
| TTGCAGAAGAATGTGGTTTC+GGG | 0.253040 | 5_1:-16824759 | Msa0720690:CDS |
| GGTAAGTTTAATGCTAATTC+AGG | 0.253741 | 5_1:-16824604 | Msa0720690:CDS |
| TAGATCTACCTTCCTAAGAT+AGG | 0.300119 | 5_1:+16824142 | None:intergenic |
| TTTGCAGAAGAATGTGGTTT+CGG | 0.361512 | 5_1:-16824760 | Msa0720690:CDS |
| GAGTTGAGGTTGGGTCTTCC+CGG | 0.364318 | 5_1:-16824876 | Msa0720690:CDS |
| TGGATGGTGCTCCCTATCTT+AGG | 0.366786 | 5_1:-16824154 | Msa0720690:CDS |
| GGCCTCCTATAAGATCATTT+AGG | 0.368510 | 5_1:-16824265 | Msa0720690:CDS |
| TTAAGCAGAGAAAGAAAGAA+AGG | 0.393981 | 5_1:+16825777 | None:intergenic |
| GATGGAGACTGGATGCTTGT+AGG | 0.411867 | 5_1:-16823838 | Msa0720690:CDS |
| AAAAGTGAACTTGAATTTGA+AGG | 0.413246 | 5_1:-16824904 | Msa0720690:CDS |
| CTTTCCTGCAAAACCTTACT+CGG | 0.416061 | 5_1:+16824520 | None:intergenic |
| AAGGCTACTGAGTTGAGGTT+GGG | 0.419598 | 5_1:-16824885 | Msa0720690:CDS |
| GGATTTGCTGATACCGTTGA+TGG | 0.420125 | 5_1:-16824726 | Msa0720690:CDS |
| TCAATCACCCGAGAGGGAAA+TGG | 0.422310 | 5_1:-16824850 | Msa0720690:CDS |
| GTCTCCGACGGCGGTGGCTA+CGG | 0.424136 | 5_1:-16825042 | Msa0720690:CDS |
| GACGATGGAACGGAATTACT+TGG | 0.426582 | 5_1:-16824991 | Msa0720690:CDS |
| CCTTTACTTCCTGCAAAAGA+TGG | 0.428383 | 5_1:-16824783 | Msa0720690:CDS |
| ATGGAGACTGGATGCTTGTA+GGG | 0.429252 | 5_1:-16823837 | Msa0720690:CDS |
| AGGAACTACTGGTCATAATC+AGG | 0.436346 | 5_1:-16824482 | Msa0720690:CDS |
| CTCTCGGGTGATTGAGATCC+GGG | 0.441176 | 5_1:+16824858 | None:intergenic |
| ATCCGAATCCATTTCCCTCT+CGG | 0.452945 | 5_1:+16824842 | None:intergenic |
| TCCGAATCCATTTCCCTCTC+GGG | 0.455237 | 5_1:+16824843 | None:intergenic |
| ACCCGAGAGGGAAATGGATT+CGG | 0.455743 | 5_1:-16824844 | Msa0720690:CDS |
| CCTCTCGGGTGATTGAGATC+CGG | 0.459016 | 5_1:+16824857 | None:intergenic |
| TGTGGTTCCCATGGAGCTCC+AGG | 0.460461 | 5_1:-16823937 | Msa0720690:CDS |
| GCCTAGACCTGGTGGAGCTC+AGG | 0.463855 | 5_1:-16824563 | Msa0720690:CDS |
| GCAGGTGCTGCTTCTATCGC+TGG | 0.467925 | 5_1:-16824460 | Msa0720690:CDS |
| GCCTGAGCTCCACCAGGTCT+AGG | 0.476166 | 5_1:+16824562 | None:intergenic |
| GAAGGCTACTGAGTTGAGGT+TGG | 0.492437 | 5_1:-16824886 | Msa0720690:CDS |
| GTAAGTTTAATGCTAATTCA+GGG | 0.493399 | 5_1:-16824603 | Msa0720690:CDS |
| GACGGCGGTGGCTACGGAGG+AGG | 0.499617 | 5_1:-16825036 | Msa0720690:CDS |
| AGTGAAAGAAATCCCGAGTA+AGG | 0.502631 | 5_1:-16824533 | Msa0720690:CDS |
| ACAAAGAGTGCAGTGGGACC+TGG | 0.505055 | 5_1:+16824188 | None:intergenic |
| GTGGTTTCGGGGAATAAGAG+AGG | 0.508267 | 5_1:-16824747 | Msa0720690:CDS |
| TTCCTAAATGATCTTATAGG+AGG | 0.509027 | 5_1:+16824263 | None:intergenic |
| GCAGGCCAGTGTGGTTCCCA+TGG | 0.511832 | 5_1:-16823946 | Msa0720690:intron |
| CATATTCTGAACCATGCAAA+AGG | 0.516368 | 5_1:+16823881 | None:intergenic |
| TGCTTGTAGGGGACGTACCA+TGG | 0.519764 | 5_1:-16823825 | Msa0720690:CDS |
| TTCTATCGCTGGTTGTGCAC+CGG | 0.524204 | 5_1:-16824449 | Msa0720690:CDS |
| TGTGACAGGGCACAAGTTGT+TGG | 0.524224 | 5_1:-16824290 | Msa0720690:intron |
| AGATCTACCTTCCTAAGATA+GGG | 0.527392 | 5_1:+16824143 | None:intergenic |
| CAAGAACAACAATGATGAAG+TGG | 0.532840 | 5_1:-16824219 | Msa0720690:CDS |
| CTCACTTATGAAGATAAAGA+TGG | 0.536028 | 5_1:-16823856 | Msa0720690:CDS |
| ATTGTTGTTCTTGGAAGCGT+TGG | 0.536259 | 5_1:+16824229 | None:intergenic |
| ACCTTCACAAAGAGTGCAGT+GGG | 0.538673 | 5_1:+16824182 | None:intergenic |
| GGAAATGTCTCCGACGGCGG+TGG | 0.539855 | 5_1:-16825048 | Msa0720690:exon |
| GCGGTGGCTACGGAGGAGGA+AGG | 0.542724 | 5_1:-16825032 | Msa0720690:CDS |
| ATGAAGATAAAGATGGAGAC+TGG | 0.547731 | 5_1:-16823849 | Msa0720690:CDS |
| GGGATTGTCTGATTGTTCAT+CGG | 0.548946 | 5_1:-16824970 | Msa0720690:CDS |
| AACAGCTGAACATCTTCTCA+AGG | 0.549658 | 5_1:+16824084 | None:intergenic |
| GAGCTCCATGGGAACCACAC+TGG | 0.553553 | 5_1:+16823941 | None:intergenic |
| GATGAAGTGGATGGAAAACC+AGG | 0.553790 | 5_1:-16824206 | Msa0720690:CDS |
| TTTCCTGCAAAACCTTACTC+GGG | 0.554928 | 5_1:+16824521 | None:intergenic |
| TGTGCAGCTAGAGGAACTAC+TGG | 0.555927 | 5_1:-16824493 | Msa0720690:CDS |
| GTGCTCGCCTGAGCTCCACC+AGG | 0.561039 | 5_1:+16824556 | None:intergenic |
| GCTTGTAGGGGACGTACCAT+GGG | 0.563761 | 5_1:-16823824 | Msa0720690:CDS |
| GATTTGCTGATACCGTTGAT+GGG | 0.566751 | 5_1:-16824725 | Msa0720690:CDS |
| TTTGTGAAGGTCAGCATGGA+TGG | 0.570866 | 5_1:-16824170 | Msa0720690:CDS |
| GCAGGAAGTAAAGGGAACAA+TGG | 0.573981 | 5_1:+16824792 | None:intergenic |
| ACAGGGCACAAGTTGTTGGT+TGG | 0.575157 | 5_1:-16824286 | Msa0720690:intron |
| AGATGGTTTGCAGAAGAATG+TGG | 0.577585 | 5_1:-16824766 | Msa0720690:CDS |
| GCGCAAACTGTCGTCGACGA+TGG | 0.579580 | 5_1:-16825006 | Msa0720690:CDS |
| TAAAGAACATCTTACTCCCA+TGG | 0.581718 | 5_1:+16823808 | None:intergenic |
| TCCTCCGTAGCCACCGCCGT+CGG | 0.586598 | 5_1:+16825038 | None:intergenic |
| CGGTGGCTACGGAGGAGGAA+GGG | 0.593859 | 5_1:-16825031 | Msa0720690:CDS |
| ACTACTGGTCATAATCAGGC+AGG | 0.595833 | 5_1:-16824478 | Msa0720690:CDS |
| ACGATGGAACGGAATTACTT+GGG | 0.597669 | 5_1:-16824990 | Msa0720690:CDS |
| CGGATCTCAATCACCCGAGA+GGG | 0.597943 | 5_1:-16824856 | Msa0720690:CDS |
| AACTGTCGTCGACGATGGAA+CGG | 0.600872 | 5_1:-16825001 | Msa0720690:CDS |
| TCCCACTGCACTCTTTGTGA+AGG | 0.601153 | 5_1:-16824183 | Msa0720690:CDS |
| AACAACAATGATGAAGTGGA+TGG | 0.601893 | 5_1:-16824215 | Msa0720690:CDS |
| TAGGGAAATGTCTCCGACGG+CGG | 0.603529 | 5_1:-16825051 | Msa0720690:exon |
| TCCGACGGCGGTGGCTACGG+AGG | 0.612859 | 5_1:-16825039 | Msa0720690:CDS |
| ATTGTCTGATTGTTCATCGG+TGG | 0.613259 | 5_1:-16824967 | Msa0720690:CDS |
| TGATGAGTGAGAGCAAGCTG+AGG | 0.616205 | 5_1:-16823906 | Msa0720690:CDS |
| ATGCTATCGCCTAGACCTGG+TGG | 0.616679 | 5_1:-16824571 | Msa0720690:CDS |
| TGGTGCTCCCTATCTTAGGA+AGG | 0.620215 | 5_1:-16824150 | Msa0720690:CDS |
| TGCAGAAGAATGTGGTTTCG+GGG | 0.623774 | 5_1:-16824758 | Msa0720690:CDS |
| GTGATGCTATCGCCTAGACC+TGG | 0.627514 | 5_1:-16824574 | Msa0720690:CDS |
| GATGAGTGAGAGCAAGCTGA+GGG | 0.627937 | 5_1:-16823905 | Msa0720690:CDS |
| TGGCTACGGAGGAGGAAGGG+CGG | 0.628102 | 5_1:-16825028 | Msa0720690:CDS |
| GAAAGGCCTTGTGCAGCTAG+AGG | 0.628138 | 5_1:-16824502 | Msa0720690:CDS |
| ATTTGAAGGCTACTGAGTTG+AGG | 0.639042 | 5_1:-16824890 | Msa0720690:CDS |
| GACCTTCACAAAGAGTGCAG+TGG | 0.642687 | 5_1:+16824181 | None:intergenic |
| CACCTGCGAAAACCCATCAA+CGG | 0.645296 | 5_1:+16824713 | None:intergenic |
| TGTGTAATGGCAGGCCAGTG+TGG | 0.646395 | 5_1:-16823955 | Msa0720690:intron |
| GGTTAGGGAAATGTCTCCGA+CGG | 0.647341 | 5_1:-16825054 | Msa0720690:exon |
| ACAGCTGAACATCTTCTCAA+GGG | 0.651538 | 5_1:+16824085 | None:intergenic |
| TGGAGACTGGATGCTTGTAG+GGG | 0.651918 | 5_1:-16823836 | Msa0720690:CDS |
| GTAGTTCCTCTAGCTGCACA+AGG | 0.655154 | 5_1:+16824496 | None:intergenic |
| ACTCTTTGTGAAGGTCAGCA+TGG | 0.660309 | 5_1:-16824174 | Msa0720690:CDS |
| GTAGATTGTGAAGTGAACTG+TGG | 0.689026 | 5_1:-16825087 | Msa0720690:intron |
| CCGGATCTCAATCACCCGAG+AGG | 0.692711 | 5_1:-16824857 | Msa0720690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCATTTTTTTAGTA+AGG | - | chr5_1:16823972-16823991 | Msa0720690:intron | 10.0% |
| !!! | TTTTTTCATTTTTTTAGTAA+GGG | - | chr5_1:16823973-16823992 | Msa0720690:intron | 10.0% |
| !!! | TTTTTCAATTTAAAATTTCA+TGG | - | chr5_1:16824312-16824331 | Msa0720690:intron | 10.0% |
| !!! | TTTTTTTTTCTTTTGTATTT+TGG | - | chr5_1:16824514-16824533 | Msa0720690:CDS | 10.0% |
| !!! | TTTTTTTCATTTTTTTAGTA+AGG | - | chr5_1:16823972-16823991 | Msa0720690:intron | 10.0% |
| !!! | TTTTTTCATTTTTTTAGTAA+GGG | - | chr5_1:16823973-16823992 | Msa0720690:intron | 10.0% |
| !!! | TTTTTCAATTTAAAATTTCA+TGG | - | chr5_1:16824312-16824331 | Msa0720690:intron | 10.0% |
| !!! | TTTTTTTTTCTTTTGTATTT+TGG | - | chr5_1:16824514-16824533 | Msa0720690:CDS | 10.0% |
| !! | TTGTTTAAATTGCTTATTAA+TGG | - | chr5_1:16824355-16824374 | Msa0720690:intron | 15.0% |
| !!! | TTAGTTTTTAGTTAGTTTTT+TGG | - | chr5_1:16824472-16824491 | Msa0720690:CDS | 15.0% |
| !! | TTGTTTAAATTGCTTATTAA+TGG | - | chr5_1:16824355-16824374 | Msa0720690:intron | 15.0% |
| !!! | TTAGTTTTTAGTTAGTTTTT+TGG | - | chr5_1:16824472-16824491 | Msa0720690:CDS | 15.0% |
| !!! | GCTTTAAAAACAAACATAAA+TGG | + | chr5_1:16824253-16824272 | None:intergenic | 20.0% |
| !! | AATAAGCAATTTAAACAACA+AGG | + | chr5_1:16824353-16824372 | None:intergenic | 20.0% |
| !!! | TTTAGTTAGTTTTTTGGTAT+TGG | - | chr5_1:16824478-16824497 | Msa0720690:CDS | 20.0% |
| !!! | TTTTTTCTTTTGTATTTTGG+TGG | - | chr5_1:16824517-16824536 | Msa0720690:CDS | 20.0% |
| !!! | TTTACAATATTTGTTATGCA+GGG | - | chr5_1:16825001-16825020 | Msa0720690:CDS | 20.0% |
| !! | ATATGAAAATTTACCATATC+AGG | + | chr5_1:16825317-16825336 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAAATGATCTTAT+AGG | + | chr5_1:16825369-16825388 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTCTGAAATCTT+TGG | - | chr5_1:16825644-16825663 | Msa0720690:intron | 20.0% |
| !!! | GCTTTAAAAACAAACATAAA+TGG | + | chr5_1:16824253-16824272 | None:intergenic | 20.0% |
| !! | AATAAGCAATTTAAACAACA+AGG | + | chr5_1:16824353-16824372 | None:intergenic | 20.0% |
| !!! | TTTAGTTAGTTTTTTGGTAT+TGG | - | chr5_1:16824478-16824497 | Msa0720690:CDS | 20.0% |
| !!! | TTTTTTCTTTTGTATTTTGG+TGG | - | chr5_1:16824517-16824536 | Msa0720690:CDS | 20.0% |
| !!! | TTTACAATATTTGTTATGCA+GGG | - | chr5_1:16825001-16825020 | Msa0720690:CDS | 20.0% |
| !! | ATATGAAAATTTACCATATC+AGG | + | chr5_1:16825317-16825336 | None:intergenic | 20.0% |
| !!! | TTTTTCCTAAATGATCTTAT+AGG | + | chr5_1:16825369-16825388 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTCTGAAATCTT+TGG | - | chr5_1:16825644-16825663 | Msa0720690:intron | 20.0% |
| !!! | TTTGTTTTTGTGTGTGTTTA+TGG | - | chr5_1:16823997-16824016 | Msa0720690:intron | 25.0% |
| !! | ACTAATTTGTAAGATCAGAA+AGG | + | chr5_1:16824401-16824420 | None:intergenic | 25.0% |
| ! | AAAAGTGAACTTGAATTTGA+AGG | - | chr5_1:16824722-16824741 | Msa0720690:CDS | 25.0% |
| !!! | AAGTGTATGTTTTGTTTTAG+TGG | - | chr5_1:16824968-16824987 | Msa0720690:CDS | 25.0% |
| !!! | GTTTTGTTTTAGTGGTTTAA+TGG | - | chr5_1:16824976-16824995 | Msa0720690:CDS | 25.0% |
| !!! | GTTTACAATATTTGTTATGC+AGG | - | chr5_1:16825000-16825019 | Msa0720690:CDS | 25.0% |
| ! | GTAAGTTTAATGCTAATTCA+GGG | - | chr5_1:16825023-16825042 | Msa0720690:CDS | 25.0% |
| ! | AAATTTACCATATCAGGATT+AGG | + | chr5_1:16825311-16825330 | None:intergenic | 25.0% |
| !! | GTAAATTTTCATATGTGACA+GGG | - | chr5_1:16825323-16825342 | Msa0720690:intron | 25.0% |
| !!! | TTTGTTTTTGTGTGTGTTTA+TGG | - | chr5_1:16823997-16824016 | Msa0720690:intron | 25.0% |
| !! | ACTAATTTGTAAGATCAGAA+AGG | + | chr5_1:16824401-16824420 | None:intergenic | 25.0% |
| ! | AAAAGTGAACTTGAATTTGA+AGG | - | chr5_1:16824722-16824741 | Msa0720690:CDS | 25.0% |
| !!! | AAGTGTATGTTTTGTTTTAG+TGG | - | chr5_1:16824968-16824987 | Msa0720690:CDS | 25.0% |
| !!! | GTTTTGTTTTAGTGGTTTAA+TGG | - | chr5_1:16824976-16824995 | Msa0720690:CDS | 25.0% |
| !!! | GTTTACAATATTTGTTATGC+AGG | - | chr5_1:16825000-16825019 | Msa0720690:CDS | 25.0% |
| ! | GTAAGTTTAATGCTAATTCA+GGG | - | chr5_1:16825023-16825042 | Msa0720690:CDS | 25.0% |
| ! | AAATTTACCATATCAGGATT+AGG | + | chr5_1:16825311-16825330 | None:intergenic | 25.0% |
| !! | GTAAATTTTCATATGTGACA+GGG | - | chr5_1:16825323-16825342 | Msa0720690:intron | 25.0% |
| TTAAGCAGAGAAAGAAAGAA+AGG | + | chr5_1:16823852-16823871 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATCACACAAACT+TGG | + | chr5_1:16824705-16824724 | None:intergenic | 30.0% |
| ! | TTTGATGAAGTTGGTTTATG+CGG | - | chr5_1:16824941-16824960 | Msa0720690:CDS | 30.0% |
| GGTAAGTTTAATGCTAATTC+AGG | - | chr5_1:16825022-16825041 | Msa0720690:CDS | 30.0% | |
| ! | GATTTTACTTACTTAGATGC+CGG | + | chr5_1:16825199-16825218 | None:intergenic | 30.0% |
| CTGAACAAACATGTATGATT+TGG | - | chr5_1:16825265-16825284 | Msa0720690:intron | 30.0% | |
| TAGATATCCTAATCCTGATA+TGG | - | chr5_1:16825301-16825320 | Msa0720690:intron | 30.0% | |
| ! | GGTAAATTTTCATATGTGAC+AGG | - | chr5_1:16825322-16825341 | Msa0720690:intron | 30.0% |
| TTCCTAAATGATCTTATAGG+AGG | + | chr5_1:16825366-16825385 | None:intergenic | 30.0% | |
| ATCATTTAGGAAAAACTCGA+TGG | - | chr5_1:16825374-16825393 | Msa0720690:intron | 30.0% | |
| CTCACTTATGAAGATAAAGA+TGG | - | chr5_1:16825770-16825789 | Msa0720690:five_prime_UTR | 30.0% | |
| TTAAGCAGAGAAAGAAAGAA+AGG | + | chr5_1:16823852-16823871 | None:intergenic | 30.0% | |
| ! | TTTTTCTCATCACACAAACT+TGG | + | chr5_1:16824705-16824724 | None:intergenic | 30.0% |
| ! | TTTGATGAAGTTGGTTTATG+CGG | - | chr5_1:16824941-16824960 | Msa0720690:CDS | 30.0% |
| GGTAAGTTTAATGCTAATTC+AGG | - | chr5_1:16825022-16825041 | Msa0720690:CDS | 30.0% | |
| ! | GATTTTACTTACTTAGATGC+CGG | + | chr5_1:16825199-16825218 | None:intergenic | 30.0% |
| CTGAACAAACATGTATGATT+TGG | - | chr5_1:16825265-16825284 | Msa0720690:intron | 30.0% | |
| TAGATATCCTAATCCTGATA+TGG | - | chr5_1:16825301-16825320 | Msa0720690:intron | 30.0% | |
| ! | GGTAAATTTTCATATGTGAC+AGG | - | chr5_1:16825322-16825341 | Msa0720690:intron | 30.0% |
| TTCCTAAATGATCTTATAGG+AGG | + | chr5_1:16825366-16825385 | None:intergenic | 30.0% | |
| ATCATTTAGGAAAAACTCGA+TGG | - | chr5_1:16825374-16825393 | Msa0720690:intron | 30.0% | |
| CTCACTTATGAAGATAAAGA+TGG | - | chr5_1:16825770-16825789 | Msa0720690:five_prime_UTR | 30.0% | |
| !!! | TGTGGTTTTGAAGTTGGTTA+GGG | - | chr5_1:16824557-16824576 | Msa0720690:CDS | 35.0% |
| ! | CATCTTTTGCAGGAAGTAAA+GGG | + | chr5_1:16824845-16824864 | None:intergenic | 35.0% |
| TTTGCAGAAGAATGTGGTTT+CGG | - | chr5_1:16824866-16824885 | Msa0720690:CDS | 35.0% | |
| !! | GGTGATTAGTTTGATGAAGT+TGG | - | chr5_1:16824932-16824951 | Msa0720690:CDS | 35.0% |
| TCTATCAACTCAACTACTCA+AGG | - | chr5_1:16825217-16825236 | Msa0720690:intron | 35.0% | |
| ! | CACTTCATCATTGTTGTTCT+TGG | + | chr5_1:16825409-16825428 | None:intergenic | 35.0% |
| CAAGAACAACAATGATGAAG+TGG | - | chr5_1:16825407-16825426 | Msa0720690:intron | 35.0% | |
| AACAACAATGATGAAGTGGA+TGG | - | chr5_1:16825411-16825430 | Msa0720690:intron | 35.0% | |
| AGATCTACCTTCCTAAGATA+GGG | + | chr5_1:16825486-16825505 | None:intergenic | 35.0% | |
| TAGATCTACCTTCCTAAGAT+AGG | + | chr5_1:16825487-16825506 | None:intergenic | 35.0% | |
| !! | ATGTTCAGCTGTTTTACTCT+AGG | - | chr5_1:16825552-16825571 | Msa0720690:intron | 35.0% |
| !! | GTTTTTGCTGATGATGAAGT+TGG | - | chr5_1:16825612-16825631 | Msa0720690:intron | 35.0% |
| AATCTTTGGCGATTGTGTAA+TGG | - | chr5_1:16825658-16825677 | Msa0720690:intron | 35.0% | |
| ! | TCACTCATCATTTCTTTTCC+TGG | + | chr5_1:16825710-16825729 | None:intergenic | 35.0% |
| CATATTCTGAACCATGCAAA+AGG | + | chr5_1:16825748-16825767 | None:intergenic | 35.0% | |
| ATGAAGATAAAGATGGAGAC+TGG | - | chr5_1:16825777-16825796 | Msa0720690:five_prime_UTR | 35.0% | |
| !!! | TGTGGTTTTGAAGTTGGTTA+GGG | - | chr5_1:16824557-16824576 | Msa0720690:CDS | 35.0% |
| ! | CATCTTTTGCAGGAAGTAAA+GGG | + | chr5_1:16824845-16824864 | None:intergenic | 35.0% |
| TTTGCAGAAGAATGTGGTTT+CGG | - | chr5_1:16824866-16824885 | Msa0720690:CDS | 35.0% | |
| !! | GGTGATTAGTTTGATGAAGT+TGG | - | chr5_1:16824932-16824951 | Msa0720690:CDS | 35.0% |
| TCTATCAACTCAACTACTCA+AGG | - | chr5_1:16825217-16825236 | Msa0720690:intron | 35.0% | |
| ! | CACTTCATCATTGTTGTTCT+TGG | + | chr5_1:16825409-16825428 | None:intergenic | 35.0% |
| CAAGAACAACAATGATGAAG+TGG | - | chr5_1:16825407-16825426 | Msa0720690:intron | 35.0% | |
| AACAACAATGATGAAGTGGA+TGG | - | chr5_1:16825411-16825430 | Msa0720690:intron | 35.0% | |
| AGATCTACCTTCCTAAGATA+GGG | + | chr5_1:16825486-16825505 | None:intergenic | 35.0% | |
| TAGATCTACCTTCCTAAGAT+AGG | + | chr5_1:16825487-16825506 | None:intergenic | 35.0% | |
| !! | ATGTTCAGCTGTTTTACTCT+AGG | - | chr5_1:16825552-16825571 | Msa0720690:intron | 35.0% |
| !! | GTTTTTGCTGATGATGAAGT+TGG | - | chr5_1:16825612-16825631 | Msa0720690:intron | 35.0% |
| AATCTTTGGCGATTGTGTAA+TGG | - | chr5_1:16825658-16825677 | Msa0720690:intron | 35.0% | |
| ! | TCACTCATCATTTCTTTTCC+TGG | + | chr5_1:16825710-16825729 | None:intergenic | 35.0% |
| CATATTCTGAACCATGCAAA+AGG | + | chr5_1:16825748-16825767 | None:intergenic | 35.0% | |
| ATGAAGATAAAGATGGAGAC+TGG | - | chr5_1:16825777-16825796 | Msa0720690:five_prime_UTR | 35.0% | |
| GTAGATTGTGAAGTGAACTG+TGG | - | chr5_1:16824539-16824558 | Msa0720690:CDS | 40.0% | |
| !!! | GTGAACTGTGGTTTTGAAGT+TGG | - | chr5_1:16824551-16824570 | Msa0720690:CDS | 40.0% |
| !!! | CTGTGGTTTTGAAGTTGGTT+AGG | - | chr5_1:16824556-16824575 | Msa0720690:CDS | 40.0% |
| ACGATGGAACGGAATTACTT+GGG | - | chr5_1:16824636-16824655 | Msa0720690:intron | 40.0% | |
| GGGATTGTCTGATTGTTCAT+CGG | - | chr5_1:16824656-16824675 | Msa0720690:intron | 40.0% | |
| ATTGTCTGATTGTTCATCGG+TGG | - | chr5_1:16824659-16824678 | Msa0720690:intron | 40.0% | |
| ATTTGAAGGCTACTGAGTTG+AGG | - | chr5_1:16824736-16824755 | Msa0720690:CDS | 40.0% | |
| ! | CCATCTTTTGCAGGAAGTAA+AGG | + | chr5_1:16824846-16824865 | None:intergenic | 40.0% |
| CCTTTACTTCCTGCAAAAGA+TGG | - | chr5_1:16824843-16824862 | Msa0720690:CDS | 40.0% | |
| ! | TTCTGCAAACCATCTTTTGC+AGG | + | chr5_1:16824855-16824874 | None:intergenic | 40.0% |
| ! | AGATGGTTTGCAGAAGAATG+TGG | - | chr5_1:16824860-16824879 | Msa0720690:CDS | 40.0% |
| TTGCAGAAGAATGTGGTTTC+GGG | - | chr5_1:16824867-16824886 | Msa0720690:CDS | 40.0% | |
| !! | GATTTGCTGATACCGTTGAT+GGG | - | chr5_1:16824901-16824920 | Msa0720690:CDS | 40.0% |
| AGTGAAAGAAATCCCGAGTA+AGG | - | chr5_1:16825093-16825112 | Msa0720690:intron | 40.0% | |
| TTTCCTGCAAAACCTTACTC+GGG | + | chr5_1:16825108-16825127 | None:intergenic | 40.0% | |
| CTTTCCTGCAAAACCTTACT+CGG | + | chr5_1:16825109-16825128 | None:intergenic | 40.0% | |
| AGGAACTACTGGTCATAATC+AGG | - | chr5_1:16825144-16825163 | Msa0720690:intron | 40.0% | |
| GGCCTCCTATAAGATCATTT+AGG | - | chr5_1:16825361-16825380 | Msa0720690:intron | 40.0% | |
| ! | ATTGTTGTTCTTGGAAGCGT+TGG | + | chr5_1:16825400-16825419 | None:intergenic | 40.0% |
| ACAGCTGAACATCTTCTCAA+GGG | + | chr5_1:16825544-16825563 | None:intergenic | 40.0% | |
| AACAGCTGAACATCTTCTCA+AGG | + | chr5_1:16825545-16825564 | None:intergenic | 40.0% | |
| GTAGATTGTGAAGTGAACTG+TGG | - | chr5_1:16824539-16824558 | Msa0720690:CDS | 40.0% | |
| !!! | GTGAACTGTGGTTTTGAAGT+TGG | - | chr5_1:16824551-16824570 | Msa0720690:CDS | 40.0% |
| !!! | CTGTGGTTTTGAAGTTGGTT+AGG | - | chr5_1:16824556-16824575 | Msa0720690:CDS | 40.0% |
| ACGATGGAACGGAATTACTT+GGG | - | chr5_1:16824636-16824655 | Msa0720690:intron | 40.0% | |
| GGGATTGTCTGATTGTTCAT+CGG | - | chr5_1:16824656-16824675 | Msa0720690:intron | 40.0% | |
| ATTGTCTGATTGTTCATCGG+TGG | - | chr5_1:16824659-16824678 | Msa0720690:intron | 40.0% | |
| ATTTGAAGGCTACTGAGTTG+AGG | - | chr5_1:16824736-16824755 | Msa0720690:CDS | 40.0% | |
| ! | CCATCTTTTGCAGGAAGTAA+AGG | + | chr5_1:16824846-16824865 | None:intergenic | 40.0% |
| CCTTTACTTCCTGCAAAAGA+TGG | - | chr5_1:16824843-16824862 | Msa0720690:CDS | 40.0% | |
| ! | TTCTGCAAACCATCTTTTGC+AGG | + | chr5_1:16824855-16824874 | None:intergenic | 40.0% |
| ! | AGATGGTTTGCAGAAGAATG+TGG | - | chr5_1:16824860-16824879 | Msa0720690:CDS | 40.0% |
| TTGCAGAAGAATGTGGTTTC+GGG | - | chr5_1:16824867-16824886 | Msa0720690:CDS | 40.0% | |
| !! | GATTTGCTGATACCGTTGAT+GGG | - | chr5_1:16824901-16824920 | Msa0720690:CDS | 40.0% |
| AGTGAAAGAAATCCCGAGTA+AGG | - | chr5_1:16825093-16825112 | Msa0720690:intron | 40.0% | |
| TTTCCTGCAAAACCTTACTC+GGG | + | chr5_1:16825108-16825127 | None:intergenic | 40.0% | |
| CTTTCCTGCAAAACCTTACT+CGG | + | chr5_1:16825109-16825128 | None:intergenic | 40.0% | |
| AGGAACTACTGGTCATAATC+AGG | - | chr5_1:16825144-16825163 | Msa0720690:intron | 40.0% | |
| GGCCTCCTATAAGATCATTT+AGG | - | chr5_1:16825361-16825380 | Msa0720690:intron | 40.0% | |
| ! | ATTGTTGTTCTTGGAAGCGT+TGG | + | chr5_1:16825400-16825419 | None:intergenic | 40.0% |
| ACAGCTGAACATCTTCTCAA+GGG | + | chr5_1:16825544-16825563 | None:intergenic | 40.0% | |
| AACAGCTGAACATCTTCTCA+AGG | + | chr5_1:16825545-16825564 | None:intergenic | 40.0% | |
| GACGATGGAACGGAATTACT+TGG | - | chr5_1:16824635-16824654 | Msa0720690:intron | 45.0% | |
| ! | AAGGCTACTGAGTTGAGGTT+GGG | - | chr5_1:16824741-16824760 | Msa0720690:CDS | 45.0% |
| ATCCGAATCCATTTCCCTCT+CGG | + | chr5_1:16824787-16824806 | None:intergenic | 45.0% | |
| GCAGGAAGTAAAGGGAACAA+TGG | + | chr5_1:16824837-16824856 | None:intergenic | 45.0% | |
| TGCAGAAGAATGTGGTTTCG+GGG | - | chr5_1:16824868-16824887 | Msa0720690:CDS | 45.0% | |
| !! | GGATTTGCTGATACCGTTGA+TGG | - | chr5_1:16824900-16824919 | Msa0720690:CDS | 45.0% |
| ! | AATCCCGAGTAAGGTTTTGC+AGG | - | chr5_1:16825102-16825121 | Msa0720690:intron | 45.0% |
| ! | CGAGTAAGGTTTTGCAGGAA+AGG | - | chr5_1:16825107-16825126 | Msa0720690:intron | 45.0% |
| ACTACTGGTCATAATCAGGC+AGG | - | chr5_1:16825148-16825167 | Msa0720690:intron | 45.0% | |
| GATGAAGTGGATGGAAAACC+AGG | - | chr5_1:16825420-16825439 | Msa0720690:intron | 45.0% | |
| ! | ACCTTCACAAAGAGTGCAGT+GGG | + | chr5_1:16825447-16825466 | None:intergenic | 45.0% |
| ACTCTTTGTGAAGGTCAGCA+TGG | - | chr5_1:16825452-16825471 | Msa0720690:intron | 45.0% | |
| TTTGTGAAGGTCAGCATGGA+TGG | - | chr5_1:16825456-16825475 | Msa0720690:intron | 45.0% | |
| TTTGGCGATTGTGTAATGGC+AGG | - | chr5_1:16825662-16825681 | Msa0720690:intron | 45.0% | |
| ! | TTCTTTTCCTGGAGCTCCAT+GGG | + | chr5_1:16825699-16825718 | None:intergenic | 45.0% |
| ! | TTTCTTTTCCTGGAGCTCCA+TGG | + | chr5_1:16825700-16825719 | None:intergenic | 45.0% |
| ATGGAGACTGGATGCTTGTA+GGG | - | chr5_1:16825789-16825808 | Msa0720690:five_prime_UTR | 45.0% | |
| GACGATGGAACGGAATTACT+TGG | - | chr5_1:16824635-16824654 | Msa0720690:intron | 45.0% | |
| ! | AAGGCTACTGAGTTGAGGTT+GGG | - | chr5_1:16824741-16824760 | Msa0720690:CDS | 45.0% |
| ATCCGAATCCATTTCCCTCT+CGG | + | chr5_1:16824787-16824806 | None:intergenic | 45.0% | |
| GCAGGAAGTAAAGGGAACAA+TGG | + | chr5_1:16824837-16824856 | None:intergenic | 45.0% | |
| TGCAGAAGAATGTGGTTTCG+GGG | - | chr5_1:16824868-16824887 | Msa0720690:CDS | 45.0% | |
| !! | GGATTTGCTGATACCGTTGA+TGG | - | chr5_1:16824900-16824919 | Msa0720690:CDS | 45.0% |
| ! | AATCCCGAGTAAGGTTTTGC+AGG | - | chr5_1:16825102-16825121 | Msa0720690:intron | 45.0% |
| ! | CGAGTAAGGTTTTGCAGGAA+AGG | - | chr5_1:16825107-16825126 | Msa0720690:intron | 45.0% |
| ACTACTGGTCATAATCAGGC+AGG | - | chr5_1:16825148-16825167 | Msa0720690:intron | 45.0% | |
| GATGAAGTGGATGGAAAACC+AGG | - | chr5_1:16825420-16825439 | Msa0720690:intron | 45.0% | |
| ! | ACCTTCACAAAGAGTGCAGT+GGG | + | chr5_1:16825447-16825466 | None:intergenic | 45.0% |
| ACTCTTTGTGAAGGTCAGCA+TGG | - | chr5_1:16825452-16825471 | Msa0720690:intron | 45.0% | |
| TTTGTGAAGGTCAGCATGGA+TGG | - | chr5_1:16825456-16825475 | Msa0720690:intron | 45.0% | |
| TTTGGCGATTGTGTAATGGC+AGG | - | chr5_1:16825662-16825681 | Msa0720690:intron | 45.0% | |
| ! | TTCTTTTCCTGGAGCTCCAT+GGG | + | chr5_1:16825699-16825718 | None:intergenic | 45.0% |
| ! | TTTCTTTTCCTGGAGCTCCA+TGG | + | chr5_1:16825700-16825719 | None:intergenic | 45.0% |
| ATGGAGACTGGATGCTTGTA+GGG | - | chr5_1:16825789-16825808 | Msa0720690:five_prime_UTR | 45.0% | |
| GGTTAGGGAAATGTCTCCGA+CGG | - | chr5_1:16824572-16824591 | Msa0720690:CDS | 50.0% | |
| AACTGTCGTCGACGATGGAA+CGG | - | chr5_1:16824625-16824644 | Msa0720690:intron | 50.0% | |
| ! | GAAGGCTACTGAGTTGAGGT+TGG | - | chr5_1:16824740-16824759 | Msa0720690:CDS | 50.0% |
| TCAATCACCCGAGAGGGAAA+TGG | - | chr5_1:16824776-16824795 | Msa0720690:CDS | 50.0% | |
| ! | ACCCGAGAGGGAAATGGATT+CGG | - | chr5_1:16824782-16824801 | Msa0720690:CDS | 50.0% |
| TCCGAATCCATTTCCCTCTC+GGG | + | chr5_1:16824786-16824805 | None:intergenic | 50.0% | |
| GTGGTTTCGGGGAATAAGAG+AGG | - | chr5_1:16824879-16824898 | Msa0720690:CDS | 50.0% | |
| !!! | TACCGTTGATGGGTTTTCGC+AGG | - | chr5_1:16824911-16824930 | Msa0720690:CDS | 50.0% |
| CACCTGCGAAAACCCATCAA+CGG | + | chr5_1:16824916-16824935 | None:intergenic | 50.0% | |
| GTAGTTCCTCTAGCTGCACA+AGG | + | chr5_1:16825133-16825152 | None:intergenic | 50.0% | |
| TGTGCAGCTAGAGGAACTAC+TGG | - | chr5_1:16825133-16825152 | Msa0720690:intron | 50.0% | |
| ! | TTCTATCGCTGGTTGTGCAC+CGG | - | chr5_1:16825177-16825196 | Msa0720690:intron | 50.0% |
| TGTGACAGGGCACAAGTTGT+TGG | - | chr5_1:16825336-16825355 | Msa0720690:intron | 50.0% | |
| ACAGGGCACAAGTTGTTGGT+TGG | - | chr5_1:16825340-16825359 | Msa0720690:intron | 50.0% | |
| TCCCACTGCACTCTTTGTGA+AGG | - | chr5_1:16825443-16825462 | Msa0720690:intron | 50.0% | |
| ! | GACCTTCACAAAGAGTGCAG+TGG | + | chr5_1:16825448-16825467 | None:intergenic | 50.0% |
| TGGATGGTGCTCCCTATCTT+AGG | - | chr5_1:16825472-16825491 | Msa0720690:intron | 50.0% | |
| TGGTGCTCCCTATCTTAGGA+AGG | - | chr5_1:16825476-16825495 | Msa0720690:intron | 50.0% | |
| TGATGAGTGAGAGCAAGCTG+AGG | - | chr5_1:16825720-16825739 | Msa0720690:five_prime_UTR | 50.0% | |
| GATGAGTGAGAGCAAGCTGA+GGG | - | chr5_1:16825721-16825740 | Msa0720690:five_prime_UTR | 50.0% | |
| ! | AAGCTGAGGGACCTTTTGCA+TGG | - | chr5_1:16825734-16825753 | Msa0720690:five_prime_UTR | 50.0% |
| GATGGAGACTGGATGCTTGT+AGG | - | chr5_1:16825788-16825807 | Msa0720690:five_prime_UTR | 50.0% | |
| TGGAGACTGGATGCTTGTAG+GGG | - | chr5_1:16825790-16825809 | Msa0720690:five_prime_UTR | 50.0% | |
| GGTTAGGGAAATGTCTCCGA+CGG | - | chr5_1:16824572-16824591 | Msa0720690:CDS | 50.0% | |
| AACTGTCGTCGACGATGGAA+CGG | - | chr5_1:16824625-16824644 | Msa0720690:intron | 50.0% | |
| ! | GAAGGCTACTGAGTTGAGGT+TGG | - | chr5_1:16824740-16824759 | Msa0720690:CDS | 50.0% |
| TCAATCACCCGAGAGGGAAA+TGG | - | chr5_1:16824776-16824795 | Msa0720690:CDS | 50.0% | |
| ! | ACCCGAGAGGGAAATGGATT+CGG | - | chr5_1:16824782-16824801 | Msa0720690:CDS | 50.0% |
| TCCGAATCCATTTCCCTCTC+GGG | + | chr5_1:16824786-16824805 | None:intergenic | 50.0% | |
| GTGGTTTCGGGGAATAAGAG+AGG | - | chr5_1:16824879-16824898 | Msa0720690:CDS | 50.0% | |
| !!! | TACCGTTGATGGGTTTTCGC+AGG | - | chr5_1:16824911-16824930 | Msa0720690:CDS | 50.0% |
| CACCTGCGAAAACCCATCAA+CGG | + | chr5_1:16824916-16824935 | None:intergenic | 50.0% | |
| GTAGTTCCTCTAGCTGCACA+AGG | + | chr5_1:16825133-16825152 | None:intergenic | 50.0% | |
| TGTGCAGCTAGAGGAACTAC+TGG | - | chr5_1:16825133-16825152 | Msa0720690:intron | 50.0% | |
| ! | TTCTATCGCTGGTTGTGCAC+CGG | - | chr5_1:16825177-16825196 | Msa0720690:intron | 50.0% |
| TGTGACAGGGCACAAGTTGT+TGG | - | chr5_1:16825336-16825355 | Msa0720690:intron | 50.0% | |
| ACAGGGCACAAGTTGTTGGT+TGG | - | chr5_1:16825340-16825359 | Msa0720690:intron | 50.0% | |
| TCCCACTGCACTCTTTGTGA+AGG | - | chr5_1:16825443-16825462 | Msa0720690:intron | 50.0% | |
| ! | GACCTTCACAAAGAGTGCAG+TGG | + | chr5_1:16825448-16825467 | None:intergenic | 50.0% |
| TGGATGGTGCTCCCTATCTT+AGG | - | chr5_1:16825472-16825491 | Msa0720690:intron | 50.0% | |
| TGGTGCTCCCTATCTTAGGA+AGG | - | chr5_1:16825476-16825495 | Msa0720690:intron | 50.0% | |
| TGATGAGTGAGAGCAAGCTG+AGG | - | chr5_1:16825720-16825739 | Msa0720690:five_prime_UTR | 50.0% | |
| GATGAGTGAGAGCAAGCTGA+GGG | - | chr5_1:16825721-16825740 | Msa0720690:five_prime_UTR | 50.0% | |
| ! | AAGCTGAGGGACCTTTTGCA+TGG | - | chr5_1:16825734-16825753 | Msa0720690:five_prime_UTR | 50.0% |
| GATGGAGACTGGATGCTTGT+AGG | - | chr5_1:16825788-16825807 | Msa0720690:five_prime_UTR | 50.0% | |
| TGGAGACTGGATGCTTGTAG+GGG | - | chr5_1:16825790-16825809 | Msa0720690:five_prime_UTR | 50.0% | |
| TAGGGAAATGTCTCCGACGG+CGG | - | chr5_1:16824575-16824594 | Msa0720690:CDS | 55.0% | |
| GAGTTGAGGTTGGGTCTTCC+CGG | - | chr5_1:16824750-16824769 | Msa0720690:CDS | 55.0% | |
| CTCTCGGGTGATTGAGATCC+GGG | + | chr5_1:16824771-16824790 | None:intergenic | 55.0% | |
| CCTCTCGGGTGATTGAGATC+CGG | + | chr5_1:16824772-16824791 | None:intergenic | 55.0% | |
| CGGATCTCAATCACCCGAGA+GGG | - | chr5_1:16824770-16824789 | Msa0720690:CDS | 55.0% | |
| GTGATGCTATCGCCTAGACC+TGG | - | chr5_1:16825052-16825071 | Msa0720690:exon | 55.0% | |
| ATGCTATCGCCTAGACCTGG+TGG | - | chr5_1:16825055-16825074 | Msa0720690:exon | 55.0% | |
| ! | GAAAGGCCTTGTGCAGCTAG+AGG | - | chr5_1:16825124-16825143 | Msa0720690:intron | 55.0% |
| ! | ACAAAGAGTGCAGTGGGACC+TGG | + | chr5_1:16825441-16825460 | None:intergenic | 55.0% |
| TGTGTAATGGCAGGCCAGTG+TGG | - | chr5_1:16825671-16825690 | Msa0720690:intron | 55.0% | |
| TGCTTGTAGGGGACGTACCA+TGG | - | chr5_1:16825801-16825820 | Msa0720690:five_prime_UTR | 55.0% | |
| GCTTGTAGGGGACGTACCAT+GGG | - | chr5_1:16825802-16825821 | Msa0720690:five_prime_UTR | 55.0% | |
| TAGGGAAATGTCTCCGACGG+CGG | - | chr5_1:16824575-16824594 | Msa0720690:CDS | 55.0% | |
| GAGTTGAGGTTGGGTCTTCC+CGG | - | chr5_1:16824750-16824769 | Msa0720690:CDS | 55.0% | |
| CTCTCGGGTGATTGAGATCC+GGG | + | chr5_1:16824771-16824790 | None:intergenic | 55.0% | |
| CCTCTCGGGTGATTGAGATC+CGG | + | chr5_1:16824772-16824791 | None:intergenic | 55.0% | |
| CGGATCTCAATCACCCGAGA+GGG | - | chr5_1:16824770-16824789 | Msa0720690:CDS | 55.0% | |
| GTGATGCTATCGCCTAGACC+TGG | - | chr5_1:16825052-16825071 | Msa0720690:exon | 55.0% | |
| ATGCTATCGCCTAGACCTGG+TGG | - | chr5_1:16825055-16825074 | Msa0720690:exon | 55.0% | |
| ! | GAAAGGCCTTGTGCAGCTAG+AGG | - | chr5_1:16825124-16825143 | Msa0720690:intron | 55.0% |
| ! | ACAAAGAGTGCAGTGGGACC+TGG | + | chr5_1:16825441-16825460 | None:intergenic | 55.0% |
| TGTGTAATGGCAGGCCAGTG+TGG | - | chr5_1:16825671-16825690 | Msa0720690:intron | 55.0% | |
| TGCTTGTAGGGGACGTACCA+TGG | - | chr5_1:16825801-16825820 | Msa0720690:five_prime_UTR | 55.0% | |
| GCTTGTAGGGGACGTACCAT+GGG | - | chr5_1:16825802-16825821 | Msa0720690:five_prime_UTR | 55.0% | |
| GCGCAAACTGTCGTCGACGA+TGG | - | chr5_1:16824620-16824639 | Msa0720690:intron | 60.0% | |
| CCGGATCTCAATCACCCGAG+AGG | - | chr5_1:16824769-16824788 | Msa0720690:CDS | 60.0% | |
| !! | GCAGGTGCTGCTTCTATCGC+TGG | - | chr5_1:16825166-16825185 | Msa0720690:intron | 60.0% |
| GAGCTCCATGGGAACCACAC+TGG | + | chr5_1:16825688-16825707 | None:intergenic | 60.0% | |
| TGTGGTTCCCATGGAGCTCC+AGG | - | chr5_1:16825689-16825708 | Msa0720690:five_prime_UTR | 60.0% | |
| GCGCAAACTGTCGTCGACGA+TGG | - | chr5_1:16824620-16824639 | Msa0720690:intron | 60.0% | |
| CCGGATCTCAATCACCCGAG+AGG | - | chr5_1:16824769-16824788 | Msa0720690:CDS | 60.0% | |
| !! | GCAGGTGCTGCTTCTATCGC+TGG | - | chr5_1:16825166-16825185 | Msa0720690:intron | 60.0% |
| GAGCTCCATGGGAACCACAC+TGG | + | chr5_1:16825688-16825707 | None:intergenic | 60.0% | |
| TGTGGTTCCCATGGAGCTCC+AGG | - | chr5_1:16825689-16825708 | Msa0720690:five_prime_UTR | 60.0% | |
| GGAAATGTCTCCGACGGCGG+TGG | - | chr5_1:16824578-16824597 | Msa0720690:CDS | 65.0% | |
| CGGTGGCTACGGAGGAGGAA+GGG | - | chr5_1:16824595-16824614 | Msa0720690:CDS | 65.0% | |
| TGGCTACGGAGGAGGAAGGG+CGG | - | chr5_1:16824598-16824617 | Msa0720690:CDS | 65.0% | |
| GCCTAGACCTGGTGGAGCTC+AGG | - | chr5_1:16825063-16825082 | Msa0720690:exon | 65.0% | |
| GCCTGAGCTCCACCAGGTCT+AGG | + | chr5_1:16825067-16825086 | None:intergenic | 65.0% | |
| GCAGGCCAGTGTGGTTCCCA+TGG | - | chr5_1:16825680-16825699 | Msa0720690:intron | 65.0% | |
| GGAAATGTCTCCGACGGCGG+TGG | - | chr5_1:16824578-16824597 | Msa0720690:CDS | 65.0% | |
| CGGTGGCTACGGAGGAGGAA+GGG | - | chr5_1:16824595-16824614 | Msa0720690:CDS | 65.0% | |
| TGGCTACGGAGGAGGAAGGG+CGG | - | chr5_1:16824598-16824617 | Msa0720690:CDS | 65.0% | |
| GCCTAGACCTGGTGGAGCTC+AGG | - | chr5_1:16825063-16825082 | Msa0720690:exon | 65.0% | |
| GCCTGAGCTCCACCAGGTCT+AGG | + | chr5_1:16825067-16825086 | None:intergenic | 65.0% | |
| GCAGGCCAGTGTGGTTCCCA+TGG | - | chr5_1:16825680-16825699 | Msa0720690:intron | 65.0% | |
| GTCTCCGACGGCGGTGGCTA+CGG | - | chr5_1:16824584-16824603 | Msa0720690:CDS | 70.0% | |
| TCCTCCGTAGCCACCGCCGT+CGG | + | chr5_1:16824591-16824610 | None:intergenic | 70.0% | |
| GCGGTGGCTACGGAGGAGGA+AGG | - | chr5_1:16824594-16824613 | Msa0720690:CDS | 70.0% | |
| GTGCTCGCCTGAGCTCCACC+AGG | + | chr5_1:16825073-16825092 | None:intergenic | 70.0% | |
| GTCTCCGACGGCGGTGGCTA+CGG | - | chr5_1:16824584-16824603 | Msa0720690:CDS | 70.0% | |
| TCCTCCGTAGCCACCGCCGT+CGG | + | chr5_1:16824591-16824610 | None:intergenic | 70.0% | |
| GCGGTGGCTACGGAGGAGGA+AGG | - | chr5_1:16824594-16824613 | Msa0720690:CDS | 70.0% | |
| GTGCTCGCCTGAGCTCCACC+AGG | + | chr5_1:16825073-16825092 | None:intergenic | 70.0% | |
| TCCGACGGCGGTGGCTACGG+AGG | - | chr5_1:16824587-16824606 | Msa0720690:CDS | 75.0% | |
| GACGGCGGTGGCTACGGAGG+AGG | - | chr5_1:16824590-16824609 | Msa0720690:CDS | 75.0% | |
| TCCGACGGCGGTGGCTACGG+AGG | - | chr5_1:16824587-16824606 | Msa0720690:CDS | 75.0% | |
| GACGGCGGTGGCTACGGAGG+AGG | - | chr5_1:16824590-16824609 | Msa0720690:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 16823819 | 16825829 | 16823819 | ID=Msa0720690;Name=Msa0720690 |
| chr5_1 | mRNA | 16823819 | 16825829 | 16823819 | ID=Msa0720690-mRNA-1;Parent=Msa0720690;Name=Msa0720690-mRNA-1;_AED=0.29;_eAED=0.29;_QI=183|1|0.8|1|0.75|0.6|5|0|303 |
| chr5_1 | exon | 16823819 | 16823964 | 16823819 | ID=Msa0720690-mRNA-1:exon:6420;Parent=Msa0720690-mRNA-1 |
| chr5_1 | exon | 16824075 | 16824304 | 16824075 | ID=Msa0720690-mRNA-1:exon:6419;Parent=Msa0720690-mRNA-1 |
| chr5_1 | exon | 16824442 | 16824626 | 16824442 | ID=Msa0720690-mRNA-1:exon:6418;Parent=Msa0720690-mRNA-1 |
| chr5_1 | exon | 16824716 | 16825105 | 16824716 | ID=Msa0720690-mRNA-1:exon:6417;Parent=Msa0720690-mRNA-1 |
| chr5_1 | exon | 16825686 | 16825829 | 16825686 | ID=Msa0720690-mRNA-1:exon:6416;Parent=Msa0720690-mRNA-1 |
| chr5_1 | five_prime_UTR | 16825686 | 16825829 | 16825686 | ID=Msa0720690-mRNA-1:five_prime_utr;Parent=Msa0720690-mRNA-1 |
| chr5_1 | five_prime_UTR | 16825067 | 16825105 | 16825067 | ID=Msa0720690-mRNA-1:five_prime_utr;Parent=Msa0720690-mRNA-1 |
| chr5_1 | CDS | 16824716 | 16825066 | 16824716 | ID=Msa0720690-mRNA-1:cds;Parent=Msa0720690-mRNA-1 |
| chr5_1 | CDS | 16824442 | 16824626 | 16824442 | ID=Msa0720690-mRNA-1:cds;Parent=Msa0720690-mRNA-1 |
| chr5_1 | CDS | 16824075 | 16824304 | 16824075 | ID=Msa0720690-mRNA-1:cds;Parent=Msa0720690-mRNA-1 |
| chr5_1 | CDS | 16823819 | 16823964 | 16823819 | ID=Msa0720690-mRNA-1:cds;Parent=Msa0720690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
