AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223400 MtrunA17_Chr2g0328561 98.476 1050 13 2 1 1050 1 1047 0.0 2133
Msa0223400 MtrunA17_Chr4g0031951 80.340 1058 163 12 1 1048 1 1023 0.0 1635
Msa0223400 MtrunA17_Chr5g0435601 56.350 1063 373 25 1 1043 9 1000 0.0 1073
Msa0223400 MtrunA17_Chr1g0199451 46.147 1051 441 24 18 1042 18 969 0.0 825
Msa0223400 MtrunA17_Chr2g0298151 49.652 574 250 16 478 1032 420 973 4.45e-162 504
Msa0223400 MtrunA17_Chr2g0298151 26.616 263 185 3 781 1042 650 905 7.64e-27 118
Msa0223400 MtrunA17_Chr5g0425961 32.817 323 204 7 713 1030 393 707 6.26e-46 177
Msa0223400 MtrunA17_Chr1g0207641 25.852 352 246 7 700 1043 118 462 1.03e-27 118
Msa0223400 MtrunA17_Chr2g0279091 32.203 177 115 2 853 1029 21 192 9.79e-26 105
Msa0223400 MtrunA17_Chr2g0279091 23.636 165 124 1 719 881 31 195 1.43e-12 67.8
Msa0223400 MtrunA17_Chr3g0134501 25.952 289 203 5 713 996 209 491 3.23e-24 108
Msa0223400 MtrunA17_Chr1g0202811 24.922 321 221 7 720 1029 94 405 2.07e-21 98.2
Msa0223400 MtrunA17_Chr2g0279101 32.609 138 89 2 713 846 424 561 8.24e-19 91.7
Msa0223400 MtrunA17_Chr5g0425331 28.994 169 115 3 746 910 19 186 1.20e-15 76.3
Msa0223400 MtrunA17_Chr2g0277761 22.807 285 187 8 718 991 114 376 1.63e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223400 AT2G29190.2 60.474 1055 318 19 1 1046 1 965 0.0 1152
Msa0223400 AT2G29190.1 60.474 1055 318 19 1 1046 1 965 0.0 1152
Msa0223400 AT2G29200.1 60.377 1060 307 21 1 1046 1 961 0.0 1140
Msa0223400 AT2G29200.2 60.377 1060 307 21 1 1046 1 961 0.0 1140
Msa0223400 AT2G29140.2 59.263 1058 317 23 1 1046 2 957 0.0 1109
Msa0223400 AT2G29140.1 59.263 1058 317 23 1 1046 2 957 0.0 1109
Msa0223400 AT3G10360.1 59.144 514 184 8 535 1046 506 995 0.0 600
Msa0223400 AT3G20250.1 56.039 414 165 3 633 1034 491 899 2.04e-153 479
Msa0223400 AT3G20250.1 26.792 265 185 4 779 1042 573 829 1.90e-23 107
Msa0223400 AT3G20250.1 51.282 78 30 2 50 124 59 131 3.80e-15 80.9
Msa0223400 AT3G20250.3 56.039 414 165 3 633 1034 527 935 5.12e-153 479
Msa0223400 AT3G20250.3 26.792 265 185 4 779 1042 609 865 1.40e-23 108
Msa0223400 AT3G20250.3 51.282 78 30 2 50 124 59 131 3.89e-15 80.9
Msa0223400 AT3G20250.2 56.039 414 165 3 633 1034 527 935 5.12e-153 479
Msa0223400 AT3G20250.2 26.792 265 185 4 779 1042 609 865 1.40e-23 108
Msa0223400 AT3G20250.2 51.282 78 30 2 50 124 59 131 3.89e-15 80.9
Msa0223400 AT4G25880.4 59.226 336 137 0 698 1033 515 850 8.90e-139 439
Msa0223400 AT4G25880.1 59.226 336 137 0 698 1033 515 850 9.05e-139 439
Msa0223400 AT4G25880.5 59.226 336 137 0 698 1033 515 850 9.05e-139 439
Msa0223400 AT4G25880.3 57.738 336 136 1 698 1033 515 844 1.70e-132 422
Msa0223400 AT4G25880.2 57.738 336 136 1 698 1033 515 844 2.18e-132 422
Msa0223400 AT1G22240.1 31.579 323 210 6 712 1030 195 510 1.35e-48 181
Msa0223400 AT1G78160.1 31.366 322 210 6 713 1030 331 645 8.22e-47 179
Msa0223400 AT1G78160.2 31.366 322 210 6 713 1030 333 647 8.91e-47 179
Msa0223400 AT5G56510.4 30.218 321 215 4 713 1029 275 590 6.91e-45 172
Msa0223400 AT5G56510.6 30.218 321 215 4 713 1029 275 590 6.91e-45 172
Msa0223400 AT5G56510.2 30.218 321 215 4 713 1029 275 590 6.91e-45 172
Msa0223400 AT5G56510.1 30.218 321 215 4 713 1029 275 590 6.91e-45 172
Msa0223400 AT5G56510.3 30.218 321 215 4 713 1029 275 590 6.91e-45 172
Msa0223400 AT5G56510.5 31.142 289 190 4 713 997 275 558 6.05e-41 160
Msa0223400 AT4G08840.1 31.546 317 204 7 718 1030 244 551 8.45e-41 159
Msa0223400 AT4G08840.1 26.957 230 149 7 713 933 314 533 3.12e-17 87.0
Msa0223400 AT4G08840.1 24.057 212 152 3 789 997 243 448 2.23e-14 77.8
Msa0223400 AT1G35730.1 29.141 326 215 7 713 1030 247 564 1.09e-37 150
Msa0223400 AT1G35730.2 29.141 326 215 7 713 1030 253 570 1.21e-37 150
Msa0223400 AT1G35750.1 30.581 327 204 10 713 1030 211 523 1.69e-35 143
Msa0223400 AT5G43090.1 20.186 322 242 4 718 1031 211 525 8.96e-19 91.7
Msa0223400 AT5G43110.1 19.335 331 247 7 711 1031 196 516 1.92e-14 77.8
Msa0223400 AT5G59280.1 21.327 211 162 2 791 1001 86 292 5.11e-12 68.9
Msa0223400 AT1G35850.2 22.047 254 187 6 791 1042 11 255 1.98e-11 66.2
Msa0223400 AT1G35850.1 24.176 273 180 10 789 1042 38 302 3.06e-11 66.2

Find 343 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGCTTTCTGAAATTTC+TGG 0.119870 2_1:-72940971 Msa0223400:CDS
GAAATTGAGGTGATAAATTA+TGG 0.158745 2_1:+72943881 None:intergenic
GAGTTAGCCAACAAGCTTTA+TGG 0.162586 2_1:-72940582 Msa0223400:CDS
CAATTTCATATCAGCAATTA+TGG 0.185841 2_1:-72943831 Msa0223400:five_prime_UTR
TCCAACCATCATGGTTATTA+TGG 0.193767 2_1:-72941232 Msa0223400:CDS
GATGAATTTGAAAAGGAAAT+AGG 0.195311 2_1:-72943460 Msa0223400:CDS
AAGCCTGTGGACCAGCATTT+TGG 0.205400 2_1:+72942286 None:intergenic
CTGGTCATGTTGTTGAATTC+AGG 0.227637 2_1:-72940952 Msa0223400:intron
TTACTAGAAGAACCCCTATT+AGG 0.230784 2_1:+72944002 None:intergenic
AAATAGACCAAAACCCTAAT+AGG 0.233088 2_1:-72944016 Msa0223400:five_prime_UTR
GAGTTTGCCATTGGACTTCC+TGG 0.240216 2_1:+72941178 None:intergenic
GCCACTGATGGTTTGAGATT+TGG 0.253931 2_1:-72942336 Msa0223400:CDS
GGAGATAGGAGGAAGGTTAA+TGG 0.256678 2_1:-72943097 Msa0223400:CDS
AAGAACCCCTATTAGGGTTT+TGG 0.260809 2_1:+72944009 None:intergenic
CCACTTCTCTTACCTGAATC+AGG 0.267516 2_1:+72941880 None:intergenic
TGTTGGCTAACTCTCTTCTC+TGG 0.270844 2_1:+72940592 None:intergenic
CAAATATAAGCTTGTAGAAT+TGG 0.275277 2_1:+72937961 None:intergenic
AATTCACCATTTAATAACTA+TGG 0.283508 2_1:-72941700 Msa0223400:CDS
CCGATTGGTAATAAAATTAT+CGG 0.288684 2_1:-72938265 Msa0223400:three_prime_UTR
CTCAGGCCATAGTTATTAAA+TGG 0.313207 2_1:+72941694 None:intergenic
AAACCACCTCCACCACTATA+AGG 0.316731 2_1:+72941754 None:intergenic
GAGATTTGGATCAAATGTTC+AGG 0.317740 2_1:-72942322 Msa0223400:CDS
AGAAAAGAATATGGTTTATC+AGG 0.319439 2_1:-72940777 Msa0223400:CDS
CAGGAGTAGTGCTTCGTGAT+AGG 0.325311 2_1:+72942229 None:intergenic
AGTGCAGTTGGAGGGTTGTT+TGG 0.328365 2_1:-72943334 Msa0223400:CDS
CTTGGAGGTGGTTTGCCCTC+TGG 0.330027 2_1:-72941538 Msa0223400:CDS
TTCAGAATCAATCATCAAAA+AGG 0.332683 2_1:+72943777 None:intergenic
TACTAGAAGAACCCCTATTA+GGG 0.334435 2_1:+72944003 None:intergenic
CCCAACAACTTGTATTTCAA+TGG 0.337549 2_1:-72941790 Msa0223400:CDS
ATTGGCAGTGCTGATCAATA+TGG 0.338609 2_1:-72940842 Msa0223400:intron
GTTGATGAAAGCGATGAAAT+TGG 0.339624 2_1:+72943962 None:intergenic
AAAACAGCTCACCCTGATTC+AGG 0.339900 2_1:-72941892 Msa0223400:CDS
AAATATAAGCTTGTAGAATT+GGG 0.341180 2_1:+72937962 None:intergenic
AATAGACCAAAACCCTAATA+GGG 0.341479 2_1:-72944015 Msa0223400:five_prime_UTR
GCTTCTGCAATTGGTGGAAT+TGG 0.342634 2_1:-72943118 Msa0223400:CDS
AGAATTCTTGAGTCCATTCC+AGG 0.343201 2_1:+72941559 None:intergenic
TCTGGACCAGAAGATTAAAA+TGG 0.343695 2_1:-72940393 Msa0223400:CDS
GGATGAAAATGAGCCTCTTC+AGG 0.344030 2_1:-72939217 Msa0223400:intron
TCTGCTGAGTGGGGTGGCGA+TGG 0.344605 2_1:-72942974 Msa0223400:CDS
TTGGATCTGGCAGTCCTATT+AGG 0.345867 2_1:-72941138 Msa0223400:CDS
CAGAAGCAAAATGCATATTC+AGG 0.354543 2_1:+72941107 None:intergenic
GGAATGGACTCAAGAATTCT+TGG 0.354552 2_1:-72941556 Msa0223400:CDS
TTCAGGTCATTGTGCCTAAT+AGG 0.357554 2_1:+72941124 None:intergenic
AATAGGTGTGGGGCAAGGAC+TGG 0.362763 2_1:+72942182 None:intergenic
AACCACTGAAGAAAAGAATA+TGG 0.364988 2_1:-72940786 Msa0223400:CDS
CAGTCTCCTCATACTACTTA+GGG 0.365149 2_1:-72938407 Msa0223400:exon
GATGTCTCATCTGGCATCAA+TGG 0.365297 2_1:-72942111 Msa0223400:CDS
GGCCATAGAAGTTGTTGATC+TGG 0.369059 2_1:-72940411 Msa0223400:CDS
TCCTGCTGTGGCATCCTTCA+TGG 0.369127 2_1:-72941653 Msa0223400:CDS
TTTAGGTTATTTAACGGTTG+AGG 0.370741 2_1:-72943596 Msa0223400:five_prime_UTR
GTTTCAGCTCGTAGCGTTGA+TGG 0.373279 2_1:-72943745 Msa0223400:five_prime_UTR
CTGCTGAGTGGGGTGGCGAT+GGG 0.374192 2_1:-72942973 Msa0223400:CDS
ACACTTCTCCACAACATTAG+AGG 0.374528 2_1:+72939299 None:intergenic
CTCAGAACCAAAACCATTCC+CGG 0.376480 2_1:+72943267 None:intergenic
GTCCAGATCAACAACTTCTA+TGG 0.380935 2_1:+72940409 None:intergenic
ATGAATTTGAAAAGGAAATA+GGG 0.381115 2_1:-72943459 Msa0223400:CDS
GGTTTGCCAGGACTAGGTCT+TGG 0.383859 2_1:-72942944 Msa0223400:CDS
CAACCCATCCATATGGTTGC+CGG 0.384834 2_1:-72940229 Msa0223400:CDS
GTTTGCCAGGACTAGGTCTT+GGG 0.388587 2_1:-72942943 Msa0223400:CDS
CTGGCAACGTGTTGTGGATC+AGG 0.389618 2_1:+72942210 None:intergenic
CTGATCCACAACACGTTGCC+AGG 0.395126 2_1:-72942209 Msa0223400:CDS
GGTGGTAATGAGGGTTCGTT+TGG 0.397361 2_1:-72943484 Msa0223400:CDS
TCCACTTCTCCAGTTGGATC+TGG 0.397655 2_1:-72941151 Msa0223400:CDS
ATAAAATCAATTGCATCTTC+AGG 0.398406 2_1:+72940287 None:intergenic
TGGGGTGGCGATGGGCTCAT+TGG 0.401101 2_1:-72942965 Msa0223400:CDS
CTCGACAACCATACATTTGA+AGG 0.401988 2_1:+72940541 None:intergenic
GTGGAGAAGTGTTTGACCTT+TGG 0.406252 2_1:-72939288 Msa0223400:CDS
CTGTGTCTATGTTTATTAGT+AGG 0.411848 2_1:-72938029 Msa0223400:three_prime_UTR
GAGCTTCAGAAAGCATATCT+TGG 0.413464 2_1:-72941316 Msa0223400:CDS
CTCATTGGTTTGCCAGGACT+AGG 0.414551 2_1:-72942950 Msa0223400:CDS
GTTCCATTGGGTGGTAAATC+CGG 0.416423 2_1:-72941259 Msa0223400:CDS
AGTCCTTGCCCCACACCTAT+TGG 0.416627 2_1:-72942180 Msa0223400:CDS
AACCACCTCCACCACTATAA+GGG 0.417360 2_1:+72941755 None:intergenic
TAGCAAAGGAGGAGGAAGTC+TGG 0.420172 2_1:+72943183 None:intergenic
GCTTTGATGACCGATGTCTT+TGG 0.420200 2_1:-72940734 Msa0223400:CDS
GCAGTTGGAGGGTTGTTTGG+AGG 0.421442 2_1:-72943331 Msa0223400:CDS
TTTCAGCTCGTAGCGTTGAT+GGG 0.421502 2_1:-72943744 Msa0223400:five_prime_UTR
AGAATGGGAAATCAAATTGC+AGG 0.421672 2_1:-72941481 Msa0223400:CDS
ATTTGCATGGCAGAGAGTAC+TGG 0.426764 2_1:-72940128 Msa0223400:intron
GGCCTGAGTGGTGGGTATGC+TGG 0.429121 2_1:-72941679 Msa0223400:CDS
GCGGTGTTTGCTACACCTCC+GGG 0.431004 2_1:-72943052 Msa0223400:CDS
ACACTTAGCCTTCAAATGTA+TGG 0.431661 2_1:-72940549 Msa0223400:CDS
TGTTGTCTGATATGGGTAGA+AGG 0.432671 2_1:-72943519 Msa0223400:CDS
TCAGTCTCCTCATACTACTT+AGG 0.432743 2_1:-72938408 Msa0223400:exon
ACTCAACTTGTGATGGGAAA+TGG 0.432894 2_1:+72942019 None:intergenic
TATTTAAAGAAGGCTGAATC+AGG 0.433743 2_1:-72941925 Msa0223400:CDS
CTCCTATACAAATTAAGTTC+AGG 0.435558 2_1:+72943391 None:intergenic
GGGGCAAGGACTGGGAGCCC+TGG 0.435922 2_1:+72942191 None:intergenic
CATAGTTGCCATACTGATCC+TGG 0.435987 2_1:+72940035 None:intergenic
AATTGGCGGCGATTGGTTGC+TGG 0.437823 2_1:+72943979 None:intergenic
TATTCTTATGCTGCTGCACT+TGG 0.438248 2_1:-72942261 Msa0223400:CDS
TGTATCACCCGGCAACCATA+TGG 0.439118 2_1:+72940221 None:intergenic
AAAGGCGGAGCTTCTGCAAT+TGG 0.441477 2_1:-72943127 Msa0223400:CDS
ACCAGTCCTGATGTCTCATC+TGG 0.444008 2_1:-72942120 Msa0223400:CDS
AGCGGTGTTTGCTACACCTC+CGG 0.444772 2_1:-72943053 Msa0223400:CDS
TCCATTGAAATACAAGTTGT+TGG 0.445718 2_1:+72941789 None:intergenic
ATATGGTTGCCGGGTGATAC+AGG 0.446850 2_1:-72940219 Msa0223400:intron
ATAGGTGTGGGGCAAGGACT+GGG 0.447203 2_1:+72942183 None:intergenic
CACCTCCGGGGTTTAACAAT+AGG 0.447693 2_1:-72943039 Msa0223400:CDS
CTTTGCTATCAAAGGAGGAT+TGG 0.447733 2_1:-72943168 Msa0223400:CDS
TCTTATGCTGCTGCACTTGG+TGG 0.450757 2_1:-72942258 Msa0223400:CDS
TCAACAGATGACGTGCTAGA+AGG 0.450839 2_1:-72942048 Msa0223400:CDS
ATGTCTCATCTGGCATCAAT+GGG 0.451430 2_1:-72942110 Msa0223400:CDS
GTTGGCTAACTCTCTTCTCT+GGG 0.452754 2_1:+72940593 None:intergenic
ATCTGTAGACAGGAATTACT+TGG 0.453537 2_1:-72941362 Msa0223400:CDS
TCACCTGGCTCCCCTTATAG+TGG 0.453570 2_1:-72941766 Msa0223400:CDS
TCCAAGTTGGTTAGCCATGA+AGG 0.455908 2_1:+72941639 None:intergenic
ATGGCTAACCAACTTGGAAC+TGG 0.455921 2_1:-72941634 Msa0223400:CDS
GCGATGAAATTGGCGGCGAT+TGG 0.456046 2_1:+72943972 None:intergenic
ATAGGACTGCCAGATCCAAC+TGG 0.456552 2_1:+72941142 None:intergenic
TTAGGTTATTTAACGGTTGA+GGG 0.459739 2_1:-72943595 Msa0223400:five_prime_UTR
GAGAAGTGTTTGACCTTTGG+AGG 0.460349 2_1:-72939285 Msa0223400:CDS
TGCTATCAAAGGAGGATTGG+AGG 0.460502 2_1:-72943165 Msa0223400:CDS
AAATTGAGGTGATAAATTAT+GGG 0.460598 2_1:+72943882 None:intergenic
TCTTTATCCACTTCTCCAGT+TGG 0.460661 2_1:-72941157 Msa0223400:CDS
TGCCCCACACCTATTGGTAG+TGG 0.460898 2_1:-72942174 Msa0223400:CDS
ACCATGATGGTTGGAACCAC+CGG 0.461246 2_1:+72941240 None:intergenic
TCCTTCATGGCTAACCAACT+TGG 0.462350 2_1:-72941640 Msa0223400:CDS
GTTGGAGGGTTGTTTGGAGG+TGG 0.463395 2_1:-72943328 Msa0223400:CDS
ACAACTCTCCCACTACCAAT+AGG 0.464142 2_1:+72942165 None:intergenic
GGTGTTGGTTTGTCTTATCC+AGG 0.464786 2_1:-72941196 Msa0223400:CDS
GTCACAATACAATGTTCCAT+TGG 0.466232 2_1:-72941272 Msa0223400:CDS
ATCCTCTGCAGAAGCAGAGC+TGG 0.467908 2_1:-72942382 Msa0223400:CDS
TTGGTTCTGAGGAAGAGCTT+AGG 0.467990 2_1:-72943255 Msa0223400:CDS
AACTAGAGGTTCTGCTGAGT+GGG 0.469464 2_1:-72942984 Msa0223400:CDS
ATCTAGGTGCCATGGTGCCA+TGG 0.470104 2_1:+72941063 None:intergenic
GATATTGCATCTGCATTGTC+TGG 0.470238 2_1:-72942081 Msa0223400:CDS
GTTTGGAGATGAATTTGAAA+AGG 0.470900 2_1:-72943467 Msa0223400:CDS
GATGGGCTCATTGGTTTGCC+AGG 0.472047 2_1:-72942956 Msa0223400:CDS
TGTAGTGATGGGTAGTGATC+AGG 0.472235 2_1:-72943567 Msa0223400:five_prime_UTR
AACCTGAACTTAATTTGTAT+AGG 0.474825 2_1:-72943393 Msa0223400:CDS
CATCTACGTTTCCAGCATCT+AGG 0.476061 2_1:+72941047 None:intergenic
TTCCCAAAATGCTGGTCCAC+AGG 0.476686 2_1:-72942289 Msa0223400:CDS
CCATTGAAATACAAGTTGTT+GGG 0.477564 2_1:+72941790 None:intergenic
TCCTCCTCCTTTGCTATCAA+AGG 0.479514 2_1:-72943176 Msa0223400:CDS
CAATTGGTGGAATTGGAGAT+AGG 0.481550 2_1:-72943111 Msa0223400:CDS
AGTGATTGGTGGTGGTAATG+AGG 0.481583 2_1:-72943494 Msa0223400:CDS
TCCATAATAACCATGATGGT+TGG 0.484051 2_1:+72941231 None:intergenic
GCATCTCATTTACAAGCAAT+AGG 0.484300 2_1:+72939250 None:intergenic
TCCCCTTATAGTGGTGGAGG+TGG 0.486724 2_1:-72941757 Msa0223400:CDS
GCACCATGGCACCTAGATGC+TGG 0.486752 2_1:-72941058 Msa0223400:CDS
AAAATGGTTCAAGAGCTTGA+TGG 0.487490 2_1:-72940377 Msa0223400:CDS
GGCTCCCCTTATAGTGGTGG+AGG 0.487949 2_1:-72941760 Msa0223400:CDS
AACATGGCCATAAAGCTTGT+TGG 0.488641 2_1:+72940575 None:intergenic
GACTCAAGAATTCTTGGAGG+TGG 0.489951 2_1:-72941550 Msa0223400:CDS
TTCATCAAATGCGTTACGAC+TGG 0.490413 2_1:+72942419 None:intergenic
AGCTATGGCGTCCCCTGGAA+TGG 0.495376 2_1:-72941572 Msa0223400:CDS
AACGAACCCTCCACAGTTGG+AGG 0.496406 2_1:+72943358 None:intergenic
GCATCAGCTATGGCGTCCCC+TGG 0.501319 2_1:-72941577 Msa0223400:CDS
ACACTATCAACCCATCCATA+TGG 0.502240 2_1:-72940236 Msa0223400:CDS
TTGCTTGTAAATGAGATGCT+TGG 0.503439 2_1:-72939246 Msa0223400:CDS
TTGAGGGTTAAGTGTAGTGA+TGG 0.504750 2_1:-72943579 Msa0223400:five_prime_UTR
TGCTAATTATGTTGTACAGA+AGG 0.505438 2_1:-72938730 Msa0223400:CDS
AAGTTGTGCAGCAGCATACT+CGG 0.508196 2_1:+72941402 None:intergenic
GTGGATAAAGAGTTTGCCAT+TGG 0.508321 2_1:+72941169 None:intergenic
CGATGTCTTTGGTAATTATG+TGG 0.509063 2_1:-72940723 Msa0223400:CDS
TTGGCAGTGCTGATCAATAT+GGG 0.509849 2_1:-72940841 Msa0223400:intron
ATGTTGGCCCAGGATCAGTA+TGG 0.510536 2_1:-72940043 Msa0223400:CDS
CTGGAATGAGGAATGTAGCT+GGG 0.511196 2_1:-72941087 Msa0223400:CDS
TCAAATGCGTTACGACTGGC+TGG 0.512314 2_1:+72942423 None:intergenic
AACCCATCCATATGGTTGCC+GGG 0.512730 2_1:-72940228 Msa0223400:CDS
AAGTCCATCCTTGGATAGGC+AGG 0.513157 2_1:-72941839 Msa0223400:CDS
GATTTCCATAATAACCATGA+TGG 0.514134 2_1:+72941227 None:intergenic
AGGAGTAGTGCTTCGTGATA+GGG 0.514242 2_1:+72942230 None:intergenic
GCCCTCCCCTAAGTAGTATG+AGG 0.514678 2_1:+72938401 None:intergenic
TTATGTTGTACAGAAGGTGC+TGG 0.516780 2_1:-72938724 Msa0223400:CDS
GGAGCCCTGGCAACGTGTTG+TGG 0.516893 2_1:+72942204 None:intergenic
CGTTGCTGCAGCATCAGCTA+TGG 0.516905 2_1:-72941587 Msa0223400:CDS
AGCAAAGGAGGAGGAAGTCT+GGG 0.518907 2_1:+72943184 None:intergenic
GAGGTTCAGATGTGTGATTA+TGG 0.519278 2_1:-72938188 Msa0223400:three_prime_UTR
TCACAATACAATGTTCCATT+GGG 0.519367 2_1:-72941271 Msa0223400:CDS
CTATTTATCTCTGTCTGTGA+TGG 0.520233 2_1:-72938295 Msa0223400:three_prime_UTR
GGCGGAGCTTCTGCAATTGG+TGG 0.520880 2_1:-72943124 Msa0223400:CDS
AGATACATCGGATCAACATA+AGG 0.522156 2_1:+72941442 None:intergenic
AGCAGTTAGCATGTTGGCCC+AGG 0.522432 2_1:-72940053 Msa0223400:CDS
AAATGAAGAGAGTGATGAAA+AGG 0.523282 2_1:+72943905 None:intergenic
GTTGTTTGGAGGTGGTTCTA+CGG 0.523386 2_1:-72943320 Msa0223400:CDS
ATGCAAGGTGGTCAGGATCA+TGG 0.523936 2_1:-72941961 Msa0223400:CDS
ACAATCATCAAGGAATTAGC+AGG 0.524000 2_1:-72939354 Msa0223400:CDS
AGACATGAGAAGTCCATCCT+TGG 0.524846 2_1:-72941848 Msa0223400:CDS
TAAACATAACTCTTTGATGC+AGG 0.525614 2_1:+72938323 None:intergenic
CATTAGAGGCAAACTTCTGC+TGG 0.527514 2_1:+72939313 None:intergenic
ACATCAGACTCAACTTGTGA+TGG 0.528233 2_1:+72942012 None:intergenic
AGATTTGGATCAAATGTTCA+GGG 0.528775 2_1:-72942321 Msa0223400:CDS
GGAAATCCTGCATATGGTGT+TGG 0.529957 2_1:-72941211 Msa0223400:CDS
TCACCTGCTTCCCAAAATGC+TGG 0.529993 2_1:-72942297 Msa0223400:CDS
TAACAGCATGTGCTTGAGCA+TGG 0.531524 2_1:-72939396 Msa0223400:intron
ATCAGCTCCTCCAACTGTGG+AGG 0.531581 2_1:-72943365 Msa0223400:CDS
GTGCATGTTCTCAGTAGAAT+GGG 0.532346 2_1:-72941496 Msa0223400:CDS
GCCATGAAGGATGCCACAGC+AGG 0.534596 2_1:+72941652 None:intergenic
TCATTACCACCACCAATCAC+TGG 0.534723 2_1:+72943496 None:intergenic
AAGTAATTCCTGTCTACAGA+TGG 0.536090 2_1:+72941364 None:intergenic
CATGACTCCTCAGCCACTGA+TGG 0.537467 2_1:-72942348 Msa0223400:CDS
GAGGGTTCGTTGAGTGCAGT+TGG 0.537596 2_1:-72943346 Msa0223400:CDS
TGGTAATTATGTGGTTCAGA+AGG 0.538547 2_1:-72940714 Msa0223400:intron
GAGGAATGTAGCTGGGGCCA+TGG 0.539400 2_1:-72941080 Msa0223400:CDS
GCCAGATCCAACTGGAGAAG+TGG 0.539436 2_1:+72941150 None:intergenic
GGTTCGTTGAGTGCAGTTGG+AGG 0.539621 2_1:-72943343 Msa0223400:CDS
TATTATGGAAATCCTGCATA+TGG 0.539931 2_1:-72941217 Msa0223400:CDS
TCAGCTCCTCCAACTGTGGA+GGG 0.541998 2_1:-72943364 Msa0223400:CDS
TCACCCGGCAACCATATGGA+TGG 0.544504 2_1:+72940225 None:intergenic
AATGAAGAGAGTGATGAAAA+GGG 0.544553 2_1:+72943906 None:intergenic
GACAAACCAACACCATATGC+AGG 0.544864 2_1:+72941205 None:intergenic
AATAACTATGGCCTGAGTGG+TGG 0.545392 2_1:-72941688 Msa0223400:CDS
TTTGGTCTATTTAGAACAAG+AGG 0.545574 2_1:+72944027 None:intergenic
TGGATCAGCTCCTCCAACTG+TGG 0.546148 2_1:-72943368 Msa0223400:CDS
CTCAACGAACCCTCCACAGT+TGG 0.546176 2_1:+72943355 None:intergenic
ATAAAATGACCATACAATCA+AGG 0.547474 2_1:-72938138 Msa0223400:three_prime_UTR
GAACTTAATTTGTATAGGAG+TGG 0.547786 2_1:-72943388 Msa0223400:CDS
TCCTCCTTTGCTATCAAAGG+AGG 0.548140 2_1:-72943173 Msa0223400:CDS
GTAGAGAAACTTGTTGCTGC+CGG 0.549361 2_1:-72938600 Msa0223400:CDS
AATTAGAACCATCTGAAGGC+TGG 0.549671 2_1:+72941719 None:intergenic
TTGTATTTCAATGGATCACC+TGG 0.550910 2_1:-72941781 Msa0223400:CDS
AAAGAATTAGTTCACGCTGT+TGG 0.551100 2_1:+72938688 None:intergenic
TCTGAAGGCTGGTATTGTGC+AGG 0.551183 2_1:+72941730 None:intergenic
CACTTCTCTTACCTGAATCA+GGG 0.551927 2_1:+72941881 None:intergenic
CATCAGTGGCTGAGGAGTCA+TGG 0.552200 2_1:+72942349 None:intergenic
TCCGGTGGTTCCAACCATCA+TGG 0.552410 2_1:-72941241 Msa0223400:CDS
TTGATGCCAGATGAGACATC+AGG 0.553190 2_1:+72942114 None:intergenic
AACAGCATGTGCTTGAGCAT+GGG 0.553226 2_1:-72939395 Msa0223400:intron
GCATATTACCAGTTCCAAGT+TGG 0.553748 2_1:+72941626 None:intergenic
TCTGGAATGAGGAATGTAGC+TGG 0.554342 2_1:-72941088 Msa0223400:CDS
GGATGTTGCTTCGCGATCAA+CGG 0.556585 2_1:-72943438 Msa0223400:CDS
CCTGGCTCCCCTTATAGTGG+TGG 0.559535 2_1:-72941763 Msa0223400:CDS
TTAACGACCCATCTGTAGAC+AGG 0.559842 2_1:-72941372 Msa0223400:CDS
GTTCGTTGAGTGCAGTTGGA+GGG 0.560309 2_1:-72943342 Msa0223400:CDS
GTCTTAAAAGAACGAAATTG+AGG 0.561210 2_1:+72943868 None:intergenic
TCTCAAACCATCAGTGGCTG+AGG 0.561369 2_1:+72942341 None:intergenic
GTGATTGGTGGTGGTAATGA+GGG 0.561511 2_1:-72943493 Msa0223400:CDS
CTCCCACTACCAATAGGTGT+GGG 0.562683 2_1:+72942171 None:intergenic
AAATGAGATGCTTGGAACTA+CGG 0.563713 2_1:-72939238 Msa0223400:CDS
CTGAGAACATGCACATCAGA+TGG 0.563732 2_1:+72941505 None:intergenic
ATAACTATGGCCTGAGTGGT+GGG 0.564056 2_1:-72941687 Msa0223400:CDS
GGACATAACACCTCTGTCAC+AGG 0.565032 2_1:-72942459 Msa0223400:CDS
GTGCTGATCAATATGGGAGC+CGG 0.565045 2_1:-72940835 Msa0223400:CDS
TTTAGGAGCAGTTAGCATGT+TGG 0.565823 2_1:-72940059 Msa0223400:CDS
GAAAAGAGAGACTGAGGCGG+TGG 0.566351 2_1:-72943017 Msa0223400:CDS
CCACCACTATAAGGGGAGCC+AGG 0.569309 2_1:+72941763 None:intergenic
GTATGGCAACTATGTCGTCC+AGG 0.569382 2_1:-72940026 Msa0223400:intron
TGTGCATGTTCTCAGTAGAA+TGG 0.570940 2_1:-72941497 Msa0223400:CDS
CAATCCTCCTTTGATAGCAA+AGG 0.571405 2_1:+72943169 None:intergenic
TGAGAAGTCCATCCTTGGAT+AGG 0.574938 2_1:-72941843 Msa0223400:CDS
TCCTTTGATAGCAAAGGAGG+AGG 0.575676 2_1:+72943175 None:intergenic
AATATAAGCTTGTAGAATTG+GGG 0.577633 2_1:+72937963 None:intergenic
ACAAGCAATAGGCGTTCAGA+AGG 0.579596 2_1:+72939261 None:intergenic
TCCTCATACTACTTAGGGGA+GGG 0.579765 2_1:-72938402 Msa0223400:exon
CAATACACTTCTGAATGACA+TGG 0.580271 2_1:+72940318 None:intergenic
GGTAGAAGGCCAGTGATTGG+TGG 0.580326 2_1:-72943505 Msa0223400:CDS
CACCCGGCAACCATATGGAT+GGG 0.580941 2_1:+72940226 None:intergenic
AGAAGGCCAGTGATTGGTGG+TGG 0.581232 2_1:-72943502 Msa0223400:CDS
TCGCGATCAACGGCGTCATG+AGG 0.581350 2_1:-72943428 Msa0223400:CDS
TTCAGCTCGTAGCGTTGATG+GGG 0.581724 2_1:-72943743 Msa0223400:five_prime_UTR
ATGGGTAGAAGGCCAGTGAT+TGG 0.582847 2_1:-72943508 Msa0223400:CDS
GCAGCACGCATATTTAAAGA+AGG 0.585048 2_1:-72941935 Msa0223400:CDS
AGTGATTGTGCAGGATGACA+TGG 0.586726 2_1:-72942481 Msa0223400:intron
CATCAGACTCAACTTGTGAT+GGG 0.588044 2_1:+72942013 None:intergenic
AGCCAGCTCTGCTTCTGCAG+AGG 0.588814 2_1:+72942380 None:intergenic
TTAGTCCCAAGACCTAGTCC+TGG 0.589038 2_1:+72942938 None:intergenic
GTTAATGGAGCTGATGAGAA+TGG 0.589456 2_1:-72943082 Msa0223400:CDS
CCTGATTCAGGTAAGAGAAG+TGG 0.589484 2_1:-72941880 Msa0223400:CDS
TGATCCACAACACGTTGCCA+GGG 0.590112 2_1:-72942208 Msa0223400:CDS
ATGGACTCAAGAATTCTTGG+AGG 0.591427 2_1:-72941553 Msa0223400:CDS
TTACGACTGGCTGGACGAGA+CGG 0.591574 2_1:+72942432 None:intergenic
GATGGAGAAGCAACTCCAGA+GGG 0.593235 2_1:+72941523 None:intergenic
ACCACCTCCACCACTATAAG+GGG 0.593482 2_1:+72941756 None:intergenic
TGGAATTGGAGATAGGAGGA+AGG 0.594744 2_1:-72943104 Msa0223400:CDS
GCCAGATGAGACATCAGGAC+TGG 0.594811 2_1:+72942119 None:intergenic
GTCTTATCCAGGAAGTCCAA+TGG 0.595595 2_1:-72941185 Msa0223400:CDS
CAGGTAAGAGAAGTGGAAGC+GGG 0.596220 2_1:-72941873 Msa0223400:CDS
TCAGGTAAGAGAAGTGGAAG+CGG 0.597387 2_1:-72941874 Msa0223400:CDS
TCTCCCACTACCAATAGGTG+TGG 0.597479 2_1:+72942170 None:intergenic
ATGCTCGACCTGCCTATCCA+AGG 0.598500 2_1:+72941831 None:intergenic
TGAGCGTTCTACAATCATCA+AGG 0.599538 2_1:-72939364 Msa0223400:CDS
CCATTGGGTGGTAAATCCGG+TGG 0.599569 2_1:-72941256 Msa0223400:CDS
AAACTAGAGGTTCTGCTGAG+TGG 0.599602 2_1:-72942985 Msa0223400:CDS
GAATTCTTGAGTCCATTCCA+GGG 0.599791 2_1:+72941560 None:intergenic
TGATGCAGGAGAACAAAGGA+GGG 0.600679 2_1:+72938337 None:intergenic
GCACAATACCAGCCTTCAGA+TGG 0.601016 2_1:-72941727 Msa0223400:CDS
ATAGTTGCCATACTGATCCT+GGG 0.602776 2_1:+72940036 None:intergenic
GAAGTTTGCCTCTAATGTTG+TGG 0.602808 2_1:-72939307 Msa0223400:CDS
TCCTCCTTTGATAGCAAAGG+AGG 0.602969 2_1:+72943172 None:intergenic
TTTCCAGCATCTAGGTGCCA+TGG 0.603193 2_1:+72941055 None:intergenic
AGTTGTGCAGCAGCATACTC+GGG 0.603765 2_1:+72941403 None:intergenic
GCCCCACACCTATTGGTAGT+GGG 0.605163 2_1:-72942173 Msa0223400:CDS
ACACCTCTGATGTCCCTGCA+TGG 0.605486 2_1:-72938164 Msa0223400:three_prime_UTR
GTCATCAAAGCAAGAGCATG+TGG 0.606191 2_1:+72940746 None:intergenic
GAAGGCTAAGTGTCAGAACA+TGG 0.607532 2_1:+72940559 None:intergenic
AGTAATTCCTGTCTACAGAT+GGG 0.607600 2_1:+72941365 None:intergenic
AGACGGAAAGCCTGTGACAG+AGG 0.609185 2_1:+72942449 None:intergenic
GATGAAAGCGATGAAATTGG+CGG 0.610380 2_1:+72943965 None:intergenic
CCACCGGATTTACCACCCAA+TGG 0.610480 2_1:+72941256 None:intergenic
GTTGTTGCTGCTGAGAAGAG+AGG 0.610481 2_1:-72942147 Msa0223400:CDS
CGCTGTGTACGAGATCAGAA+TGG 0.610763 2_1:-72940344 Msa0223400:CDS
TTCCAGCATACCCACCACTC+AGG 0.611254 2_1:+72941677 None:intergenic
CGATGTATCTTCAGTACATG+AGG 0.611331 2_1:-72941429 Msa0223400:CDS
TTGATGCAGGAGAACAAAGG+AGG 0.613025 2_1:+72938336 None:intergenic
GAGAAACTTGTTGCTGCCGG+AGG 0.618103 2_1:-72938597 Msa0223400:intron
CAATACAATGTTCCATTGGG+TGG 0.619426 2_1:-72941268 Msa0223400:CDS
TTTAATAACTATGGCCTGAG+TGG 0.620041 2_1:-72941691 Msa0223400:CDS
ATAGACCAAAACCCTAATAG+GGG 0.621279 2_1:-72944014 Msa0223400:five_prime_UTR
TAATAATATTGAAGATACGC+AGG 0.625157 2_1:+72943226 None:intergenic
TTGGTGGAATTGGAGATAGG+AGG 0.626161 2_1:-72943108 Msa0223400:CDS
CTCATGTACTGAAGATACAT+CGG 0.626468 2_1:+72941430 None:intergenic
AGAGGTTCTGCTGAGTGGGG+TGG 0.628016 2_1:-72942980 Msa0223400:CDS
CAATAGGAAAAGAGAGACTG+AGG 0.630432 2_1:-72943023 Msa0223400:CDS
GTATGCTGGAAATCCTGCTG+TGG 0.630526 2_1:-72941665 Msa0223400:CDS
TGAGGGTTAAGTGTAGTGAT+GGG 0.631047 2_1:-72943578 Msa0223400:five_prime_UTR
TCCAAATCTCAAACCATCAG+TGG 0.631617 2_1:+72942335 None:intergenic
GCGTTCAGAAGGACCTCCAA+AGG 0.633901 2_1:+72939272 None:intergenic
AAAGGAAAAGAAACCTGAAG+AGG 0.634760 2_1:+72939204 None:intergenic
GGTGAATTAGAACCATCTGA+AGG 0.639525 2_1:+72941715 None:intergenic
CACATAATTACCAAAGACAT+CGG 0.640601 2_1:+72940724 None:intergenic
CTTCCATGCAGGGACATCAG+AGG 0.640701 2_1:+72938161 None:intergenic
ATGATTGTAGAACGCTCATG+AGG 0.641163 2_1:+72939369 None:intergenic
TGGAATGAGGAATGTAGCTG+GGG 0.641270 2_1:-72941086 Msa0223400:CDS
AATGGAGCTGATGAGAATGG+TGG 0.643341 2_1:-72943079 Msa0223400:CDS
CTACCAATAGGTGTGGGGCA+AGG 0.645705 2_1:+72942177 None:intergenic
TAGCTGGGGCCATGGCACCA+TGG 0.652445 2_1:-72941072 Msa0223400:CDS
GCATAAGAATATGAAGCCTG+TGG 0.652845 2_1:+72942273 None:intergenic
TCTGTAGACAGGAATTACTT+GGG 0.655499 2_1:-72941361 Msa0223400:CDS
CGGTGTTTGCTACACCTCCG+GGG 0.655610 2_1:-72943051 Msa0223400:CDS
CTCCTCATACTACTTAGGGG+AGG 0.656672 2_1:-72938403 Msa0223400:exon
TCGACCTGCCTATCCAAGGA+TGG 0.658687 2_1:+72941835 None:intergenic
AGCGACAATATGTTTCCCAT+AGG 0.660900 2_1:+72938626 None:intergenic
TTCCTATTGTTAAACCCCGG+AGG 0.662875 2_1:+72943037 None:intergenic
ACTAGAGGTTCTGCTGAGTG+GGG 0.663357 2_1:-72942983 Msa0223400:CDS
AATTCTTGAGTCCATTCCAG+GGG 0.665267 2_1:+72941561 None:intergenic
CTGTACAAAATGTTGCTATG+TGG 0.666597 2_1:-72938056 Msa0223400:three_prime_UTR
GTGGCTGATGAGAAAACTAG+AGG 0.667175 2_1:-72942998 Msa0223400:CDS
TCCCACTACCAATAGGTGTG+GGG 0.673011 2_1:+72942172 None:intergenic
GATGCAGGAGAACAAAGGAG+GGG 0.674550 2_1:+72938338 None:intergenic
ATGGGAAATCAAATTGCAGG+TGG 0.674760 2_1:-72941478 Msa0223400:CDS
AGATGGAGAAGCAACTCCAG+AGG 0.676390 2_1:+72941522 None:intergenic
TGTGATGGATAGTAGCCGAT+TGG 0.681445 2_1:-72938280 Msa0223400:three_prime_UTR
TCTTTGATGCAGGAGAACAA+AGG 0.691435 2_1:+72938333 None:intergenic
ACATCTTTACCTGTATCACC+CGG 0.691610 2_1:+72940210 None:intergenic
GTTGTCTGTACAGCTAACTG+AGG 0.697737 2_1:-72938371 Msa0223400:three_prime_UTR
TGATGAGAATGGTGGAAGAG+CGG 0.704265 2_1:-72943071 Msa0223400:CDS
TGGTTGTCGAGTCATCCAGA+AGG 0.705947 2_1:-72940529 Msa0223400:intron
ACATTGTATTGTGACTTCTG+AGG 0.707222 2_1:+72941280 None:intergenic
GTGATTGTGCAGGATGACAT+GGG 0.717630 2_1:-72942480 Msa0223400:intron
AGTCTCCTCATACTACTTAG+GGG 0.720809 2_1:-72938406 Msa0223400:exon
TAGGAAAAGAGAGACTGAGG+CGG 0.753953 2_1:-72943020 Msa0223400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGATTAATTTTTGTTAA+GGG - chr2_1:72938322-72938341 Msa0223400:three_prime_UTR 10.0%
!!! TTAATATAATTTTCTCTTAT+TGG - chr2_1:72941151-72941170 Msa0223400:CDS 10.0%
!!! TTTTTTATTTCTATATCTTT+AGG - chr2_1:72941579-72941598 Msa0223400:CDS 10.0%
!!! GATATGATTAATTTTTGTTA+AGG - chr2_1:72938321-72938340 Msa0223400:three_prime_UTR 15.0%
!! CTGAATAAATTTAATTGATT+TGG - chr2_1:72939273-72939292 Msa0223400:CDS 15.0%
!!! AATTATCAAAGATATCTTTT+TGG - chr2_1:72940026-72940045 Msa0223400:intron 15.0%
!! AAGATCTATATATTTATGAA+TGG + chr2_1:72941349-72941368 None:intergenic 15.0%
!! AAACTAATCATTTAATATTG+TGG + chr2_1:72942332-72942351 None:intergenic 15.0%
!!! AGTTTTTAGATTTTGTTTTA+TGG - chr2_1:72942347-72942366 Msa0223400:CDS 15.0%
!!! GTTTTTAGATTTTGTTTTAT+GGG - chr2_1:72942348-72942367 Msa0223400:CDS 15.0%
!! AAATTATTAACAGCTATTAA+AGG + chr2_1:72942828-72942847 None:intergenic 15.0%
!! AAATTGAGGTGATAAATTAT+GGG + chr2_1:72938132-72938151 None:intergenic 20.0%
!! AAAAAAAATGTTGTCTGATA+TGG - chr2_1:72938484-72938503 Msa0223400:intron 20.0%
!! AAAAAAATGTTGTCTGATAT+GGG - chr2_1:72938485-72938504 Msa0223400:intron 20.0%
!! ATGAATTTGAAAAGGAAATA+GGG - chr2_1:72938552-72938571 Msa0223400:intron 20.0%
!!! AAATTTATTCAGTTTGTTAG+TGG + chr2_1:72939265-72939284 None:intergenic 20.0%
!!! TTCCTAAAAATCCTATATTT+TGG - chr2_1:72939322-72939341 Msa0223400:CDS 20.0%
!! AATTCACCATTTAATAACTA+TGG - chr2_1:72940311-72940330 Msa0223400:CDS 20.0%
!! GTTATGAATTATTATAAACC+TGG + chr2_1:72942006-72942025 None:intergenic 20.0%
!!! AACATATTATTTTAAGTCCT+CGG + chr2_1:72942967-72942986 None:intergenic 20.0%
!!! GCGATTTTTTTTTTTTTTGA+AGG + chr2_1:72943136-72943155 None:intergenic 20.0%
!!! TTATACATAGATTTTAAGAG+AGG - chr2_1:72943799-72943818 Msa0223400:five_prime_UTR 20.0%
!! GTTGTAAAGTTTCATAAAAA+CGG - chr2_1:72943907-72943926 Msa0223400:five_prime_UTR 20.0%
!! AAATATAAGCTTGTAGAATT+GGG + chr2_1:72944052-72944071 None:intergenic 20.0%
!!! ATGAAAAGGGTGAAATTTTT+TGG + chr2_1:72938095-72938114 None:intergenic 25.0%
! GAAATTGAGGTGATAAATTA+TGG + chr2_1:72938133-72938152 None:intergenic 25.0%
! CAATTTCATATCAGCAATTA+TGG - chr2_1:72938180-72938199 Msa0223400:three_prime_UTR 25.0%
! TTCAGAATCAATCATCAAAA+AGG + chr2_1:72938237-72938256 None:intergenic 25.0%
!!! TGATAAAAGTTTCCGTTTTT+AGG - chr2_1:72938398-72938417 Msa0223400:exon 25.0%
!!! TCCGTTTTTAGGTTATTTAA+CGG - chr2_1:72938409-72938428 Msa0223400:CDS 25.0%
! ACCGTTAAATAACCTAAAAA+CGG + chr2_1:72938413-72938432 None:intergenic 25.0%
! GATGAATTTGAAAAGGAAAT+AGG - chr2_1:72938551-72938570 Msa0223400:intron 25.0%
!!! AACCTGAACTTAATTTGTAT+AGG - chr2_1:72938618-72938637 Msa0223400:CDS 25.0%
! TAATAATATTGAAGATACGC+AGG + chr2_1:72938788-72938807 None:intergenic 25.0%
!! TGCCAAAATATAGGATTTTT+AGG + chr2_1:72939327-72939346 None:intergenic 25.0%
!! TTATGTGCATATGTTGATAA+TGG - chr2_1:72939377-72939396 Msa0223400:CDS 25.0%
! AGAAAAGAATATGGTTTATC+AGG - chr2_1:72941234-72941253 Msa0223400:CDS 25.0%
! TTATTACTCTGTCTCTATAT+TGG - chr2_1:72941323-72941342 Msa0223400:CDS 25.0%
! ATAAAATCAATTGCATCTTC+AGG + chr2_1:72941727-72941746 None:intergenic 25.0%
!!! TGTAATACGTTTTATTTGCA+TGG - chr2_1:72941870-72941889 Msa0223400:CDS 25.0%
!! AAAGTTATGGATGAGATTTT+AGG - chr2_1:72941935-72941954 Msa0223400:CDS 25.0%
!! ACAAAGCATTATGATTGTTA+GGG + chr2_1:72942083-72942102 None:intergenic 25.0%
!! TTGTGAAGTTTTCTTCATTA+TGG - chr2_1:72942099-72942118 Msa0223400:CDS 25.0%
! AGTGAAGCAAATCAATAAAA+CGG + chr2_1:72942233-72942252 None:intergenic 25.0%
! AGTAAATATGACACGATAAA+AGG + chr2_1:72942553-72942572 None:intergenic 25.0%
! TGTTCAAACGTTAAATTACA+TGG + chr2_1:72943081-72943100 None:intergenic 25.0%
! AATTTAACGTTTGAACAGAA+TGG - chr2_1:72943084-72943103 Msa0223400:CDS 25.0%
!! AATTTTGTCAAAACATACTG+AGG + chr2_1:72943187-72943206 None:intergenic 25.0%
! AAAATAAGTATAAGTACCTC+CGG + chr2_1:72943433-72943452 None:intergenic 25.0%
!! CCGATAATTTTATTACCAAT+CGG + chr2_1:72943749-72943768 None:intergenic 25.0%
!! CCGATTGGTAATAAAATTAT+CGG - chr2_1:72943746-72943765 Msa0223400:five_prime_UTR 25.0%
! ATAAAATGACCATACAATCA+AGG - chr2_1:72943873-72943892 Msa0223400:five_prime_UTR 25.0%
! AATATAAGCTTGTAGAATTG+GGG + chr2_1:72944051-72944070 None:intergenic 25.0%
! CAAATATAAGCTTGTAGAAT+TGG + chr2_1:72944053-72944072 None:intergenic 25.0%
! TTTGGTCTATTTAGAACAAG+AGG + chr2_1:72937987-72938006 None:intergenic 30.0%
AAATAGACCAAAACCCTAAT+AGG - chr2_1:72937995-72938014 Msa0223400:three_prime_UTR 30.0%
AATAGACCAAAACCCTAATA+GGG - chr2_1:72937996-72938015 Msa0223400:three_prime_UTR 30.0%
AATGAAGAGAGTGATGAAAA+GGG + chr2_1:72938108-72938127 None:intergenic 30.0%
AAATGAAGAGAGTGATGAAA+AGG + chr2_1:72938109-72938128 None:intergenic 30.0%
GTCTTAAAAGAACGAAATTG+AGG + chr2_1:72938146-72938165 None:intergenic 30.0%
! TGCTTTTGATGCTGTAAATA+TGG - chr2_1:72938359-72938378 Msa0223400:three_prime_UTR 30.0%
! GCTTTTGATGCTGTAAATAT+GGG - chr2_1:72938360-72938379 Msa0223400:three_prime_UTR 30.0%
! CTTTTGATGCTGTAAATATG+GGG - chr2_1:72938361-72938380 Msa0223400:three_prime_UTR 30.0%
! TTTAGGTTATTTAACGGTTG+AGG - chr2_1:72938415-72938434 Msa0223400:CDS 30.0%
TTAGGTTATTTAACGGTTGA+GGG - chr2_1:72938416-72938435 Msa0223400:CDS 30.0%
GTTTGGAGATGAATTTGAAA+AGG - chr2_1:72938544-72938563 Msa0223400:intron 30.0%
CTCCTATACAAATTAAGTTC+AGG + chr2_1:72938623-72938642 None:intergenic 30.0%
!! GAACTTAATTTGTATAGGAG+TGG - chr2_1:72938623-72938642 Msa0223400:CDS 30.0%
CAAAAGTGACATAAAATCCA+GGG + chr2_1:72939169-72939188 None:intergenic 30.0%
ACAAAAGTGACATAAAATCC+AGG + chr2_1:72939170-72939189 None:intergenic 30.0%
CAATGGAAGAAAAGATCAAA+CGG + chr2_1:72939196-72939215 None:intergenic 30.0%
! GTGCTCAAAAGATTTTACAA+TGG + chr2_1:72939213-72939232 None:intergenic 30.0%
!! TTAATTGATTTGGCTGTGTA+TGG - chr2_1:72939283-72939302 Msa0223400:CDS 30.0%
!! TAATTGATTTGGCTGTGTAT+GGG - chr2_1:72939284-72939303 Msa0223400:CDS 30.0%
TTACAAGTGTGCCAAAATAT+AGG + chr2_1:72939336-72939355 None:intergenic 30.0%
AGATTTGGATCAAATGTTCA+GGG - chr2_1:72939690-72939709 Msa0223400:intron 30.0%
!! AGATATCTTTTTGGTATGCA+AGG - chr2_1:72940035-72940054 Msa0223400:CDS 30.0%
TATTTAAAGAAGGCTGAATC+AGG - chr2_1:72940086-72940105 Msa0223400:CDS 30.0%
CCATTGAAATACAAGTTGTT+GGG + chr2_1:72940224-72940243 None:intergenic 30.0%
TCCATTGAAATACAAGTTGT+TGG + chr2_1:72940225-72940244 None:intergenic 30.0%
TCACAATACAATGTTCCATT+GGG - chr2_1:72940740-72940759 Msa0223400:CDS 30.0%
GATTTCCATAATAACCATGA+TGG + chr2_1:72940787-72940806 None:intergenic 30.0%
TATTATGGAAATCCTGCATA+TGG - chr2_1:72940794-72940813 Msa0223400:CDS 30.0%
!! TTTGAGCTTTCTGAAATTTC+TGG - chr2_1:72941040-72941059 Msa0223400:CDS 30.0%
! CAAGCTTTTGTTGAATAAAC+CGG + chr2_1:72941198-72941217 None:intergenic 30.0%
AACCACTGAAGAAAAGAATA+TGG - chr2_1:72941225-72941244 Msa0223400:CDS 30.0%
! AACCATATTCTTTTCTTCAG+TGG + chr2_1:72941230-72941249 None:intergenic 30.0%
CACATAATTACCAAAGACAT+CGG + chr2_1:72941290-72941309 None:intergenic 30.0%
TGAAAATTGACAATACCTTC+TGG + chr2_1:72941500-72941519 None:intergenic 30.0%
!! CTTGAACCATTTTAATCTTC+TGG + chr2_1:72941627-72941646 None:intergenic 30.0%
GATACAGGTAAAGATGTATT+CGG - chr2_1:72941807-72941826 Msa0223400:CDS 30.0%
AATAAAACGTATTACAGCCA+AGG + chr2_1:72941866-72941885 None:intergenic 30.0%
!! TAACTTTTTGTTGTGTGTCA+GGG + chr2_1:72941922-72941941 None:intergenic 30.0%
!! ATAACTTTTTGTTGTGTGTC+AGG + chr2_1:72941923-72941942 None:intergenic 30.0%
TGACACACAACAAAAAGTTA+TGG - chr2_1:72941922-72941941 Msa0223400:CDS 30.0%
! CACTTTTAAATCAACAAGTC+TGG + chr2_1:72942057-72942076 None:intergenic 30.0%
!! CAGACTTGTTGATTTAAAAG+TGG - chr2_1:72942055-72942074 Msa0223400:CDS 30.0%
! CACAAAGCATTATGATTGTT+AGG + chr2_1:72942084-72942103 None:intergenic 30.0%
TGAAGCAAATCAATAAAACG+GGG + chr2_1:72942231-72942250 None:intergenic 30.0%
GTGAAGCAAATCAATAAAAC+GGG + chr2_1:72942232-72942251 None:intergenic 30.0%
GATGGTGTACATCATAATAA+AGG + chr2_1:72942291-72942310 None:intergenic 30.0%
!! TTTTCAAGAGAGATTTCACA+GGG + chr2_1:72943044-72943063 None:intergenic 30.0%
!! ATTTTCAAGAGAGATTTCAC+AGG + chr2_1:72943045-72943064 None:intergenic 30.0%
TGCTAATTATGTTGTACAGA+AGG - chr2_1:72943281-72943300 Msa0223400:CDS 30.0%
! CATTGAAAAAGTACACCTAT+GGG - chr2_1:72943370-72943389 Msa0223400:CDS 30.0%
ATTAATGCATCATGTGTGTT+TGG - chr2_1:72943475-72943494 Msa0223400:CDS 30.0%
TAAACATAACTCTTTGATGC+AGG + chr2_1:72943691-72943710 None:intergenic 30.0%
CCTTAAAAACCTTGATTGTA+TGG + chr2_1:72943885-72943904 None:intergenic 30.0%
! CCATACAATCAAGGTTTTTA+AGG - chr2_1:72943882-72943901 Msa0223400:five_prime_UTR 30.0%
!! TACAATCAAGGTTTTTAAGG+TGG - chr2_1:72943885-72943904 Msa0223400:five_prime_UTR 30.0%
CTGTGTCTATGTTTATTAGT+AGG - chr2_1:72943982-72944001 Msa0223400:five_prime_UTR 30.0%
ATAGACCAAAACCCTAATAG+GGG - chr2_1:72937997-72938016 Msa0223400:three_prime_UTR 35.0%
TACTAGAAGAACCCCTATTA+GGG + chr2_1:72938011-72938030 None:intergenic 35.0%
TTACTAGAAGAACCCCTATT+AGG + chr2_1:72938012-72938031 None:intergenic 35.0%
! GTTGATGAAAGCGATGAAAT+TGG + chr2_1:72938052-72938071 None:intergenic 35.0%
! CTTTTCCTATTGTTAAACCC+CGG + chr2_1:72938980-72938999 None:intergenic 35.0%
AAAATACTGCGAAAGAAGCA+AGG + chr2_1:72939130-72939149 None:intergenic 35.0%
TGACATAAAATCCAGGGAAA+AGG + chr2_1:72939163-72939182 None:intergenic 35.0%
!! TTGTTAGTGGTCTTGTTTGT+AGG + chr2_1:72939252-72939271 None:intergenic 35.0%
!! AATTGATTTGGCTGTGTATG+GGG - chr2_1:72939285-72939304 Msa0223400:CDS 35.0%
AATTAAGCTGAACAGATGTG+AGG + chr2_1:72939449-72939468 None:intergenic 35.0%
GATGATCGCTAGAAGAAAAA+GGG + chr2_1:72939503-72939522 None:intergenic 35.0%
AGATGATCGCTAGAAGAAAA+AGG + chr2_1:72939504-72939523 None:intergenic 35.0%
TCTATAACAAGTGATTGTGC+AGG - chr2_1:72939521-72939540 Msa0223400:intron 35.0%
GAGATTTGGATCAAATGTTC+AGG - chr2_1:72939689-72939708 Msa0223400:intron 35.0%
!! TATCTTTTTGGTATGCAAGG+TGG - chr2_1:72940038-72940057 Msa0223400:CDS 35.0%
CCCAACAACTTGTATTTCAA+TGG - chr2_1:72940221-72940240 Msa0223400:CDS 35.0%
TTGTATTTCAATGGATCACC+TGG - chr2_1:72940230-72940249 Msa0223400:CDS 35.0%
CTCAGGCCATAGTTATTAAA+TGG + chr2_1:72940320-72940339 None:intergenic 35.0%
TTTAATAACTATGGCCTGAG+TGG - chr2_1:72940320-72940339 Msa0223400:CDS 35.0%
AGAATGGGAAATCAAATTGC+AGG - chr2_1:72940530-72940549 Msa0223400:CDS 35.0%
AGATACATCGGATCAACATA+AGG + chr2_1:72940572-72940591 None:intergenic 35.0%
CTCATGTACTGAAGATACAT+CGG + chr2_1:72940584-72940603 None:intergenic 35.0%
AGTAATTCCTGTCTACAGAT+GGG + chr2_1:72940649-72940668 None:intergenic 35.0%
AAGTAATTCCTGTCTACAGA+TGG + chr2_1:72940650-72940669 None:intergenic 35.0%
ATCTGTAGACAGGAATTACT+TGG - chr2_1:72940649-72940668 Msa0223400:intron 35.0%
TCTGTAGACAGGAATTACTT+GGG - chr2_1:72940650-72940669 Msa0223400:intron 35.0%
ACATTGTATTGTGACTTCTG+AGG + chr2_1:72940734-72940753 None:intergenic 35.0%
GTCACAATACAATGTTCCAT+TGG - chr2_1:72940739-72940758 Msa0223400:CDS 35.0%
TCCAACCATCATGGTTATTA+TGG - chr2_1:72940779-72940798 Msa0223400:CDS 35.0%
TCCATAATAACCATGATGGT+TGG + chr2_1:72940783-72940802 None:intergenic 35.0%
CAGAAGCAAAATGCATATTC+AGG + chr2_1:72940907-72940926 None:intergenic 35.0%
! CTGAATATGCATTTTGCTTC+TGG - chr2_1:72940905-72940924 Msa0223400:intron 35.0%
! AAATTTTGCTTCGTCTCTGT+TGG - chr2_1:72940988-72941007 Msa0223400:CDS 35.0%
! AGGTATACCTTTTTATAGCG+TGG - chr2_1:72941079-72941098 Msa0223400:CDS 35.0%
AACATCACCACGCTATAAAA+AGG + chr2_1:72941089-72941108 None:intergenic 35.0%
! CGATGTCTTTGGTAATTATG+TGG - chr2_1:72941288-72941307 Msa0223400:CDS 35.0%
TGGTAATTATGTGGTTCAGA+AGG - chr2_1:72941297-72941316 Msa0223400:CDS 35.0%
TTTGAGTGACAATTTGCATC+TGG - chr2_1:72941370-72941389 Msa0223400:CDS 35.0%
! ACACTTAGCCTTCAAATGTA+TGG - chr2_1:72941462-72941481 Msa0223400:CDS 35.0%
TCTGGACCAGAAGATTAAAA+TGG - chr2_1:72941618-72941637 Msa0223400:CDS 35.0%
AAAATGGTTCAAGAGCTTGA+TGG - chr2_1:72941634-72941653 Msa0223400:CDS 35.0%
CAATACACTTCTGAATGACA+TGG + chr2_1:72941696-72941715 None:intergenic 35.0%
!! TTTGTGCACTTTAAAGTCCT+TGG - chr2_1:72941846-72941865 Msa0223400:CDS 35.0%
!!! ATCTAGCTTTTCTGCACTTT+TGG - chr2_1:72942156-72942175 Msa0223400:CDS 35.0%
! TGAGCATAAAGCATTAAGGA+TGG + chr2_1:72942463-72942482 None:intergenic 35.0%
! CGATTGAGCATAAAGCATTA+AGG + chr2_1:72942467-72942486 None:intergenic 35.0%
CTAGAAGTTTGGATCACAAA+CGG + chr2_1:72942498-72942517 None:intergenic 35.0%
!! CAAAAGGACAAAGTATTGGA+TGG + chr2_1:72942529-72942548 None:intergenic 35.0%
AGGACAAAAGGACAAAGTAT+TGG + chr2_1:72942533-72942552 None:intergenic 35.0%
TGACACGATAAAAGGACAAA+AGG + chr2_1:72942545-72942564 None:intergenic 35.0%
! TGCTGTTATTTACAAGGAGT+GGG + chr2_1:72942603-72942622 None:intergenic 35.0%
! ATGCTGTTATTTACAAGGAG+TGG + chr2_1:72942604-72942623 None:intergenic 35.0%
! AGCACATGCTGTTATTTACA+AGG + chr2_1:72942609-72942628 None:intergenic 35.0%
ACAATCATCAAGGAATTAGC+AGG - chr2_1:72942657-72942676 Msa0223400:intron 35.0%
GCATCTCATTTACAAGCAAT+AGG + chr2_1:72942764-72942783 None:intergenic 35.0%
TTGCTTGTAAATGAGATGCT+TGG - chr2_1:72942765-72942784 Msa0223400:intron 35.0%
AAATGAGATGCTTGGAACTA+CGG - chr2_1:72942773-72942792 Msa0223400:intron 35.0%
AAAGGAAAAGAAACCTGAAG+AGG + chr2_1:72942810-72942829 None:intergenic 35.0%
CTTCAACTAAGCAAAGCTAA+AGG + chr2_1:72942851-72942870 None:intergenic 35.0%
!! TTAGTTGAAGCTTGTTAAGC+TGG - chr2_1:72942861-72942880 Msa0223400:intron 35.0%
TAATCCAAGAGGCGAATATT+TGG - chr2_1:72942908-72942927 Msa0223400:intron 35.0%
!!! GTTTTAGCTAGCTTTAAGTG+TGG - chr2_1:72942988-72943007 Msa0223400:CDS 35.0%
TCAATAACTTCAGCATCGTT+TGG + chr2_1:72943162-72943181 None:intergenic 35.0%
ATCATGTTCCTCTTATATGC+AGG - chr2_1:72943239-72943258 Msa0223400:CDS 35.0%
AAAGAATTAGTTCACGCTGT+TGG + chr2_1:72943326-72943345 None:intergenic 35.0%
! GCATTGAAAAAGTACACCTA+TGG - chr2_1:72943369-72943388 Msa0223400:CDS 35.0%
AAAACTCAATAGAGCATGCA+TGG + chr2_1:72943525-72943544 None:intergenic 35.0%
CTATTTATCTCTGTCTGTGA+TGG - chr2_1:72943716-72943735 Msa0223400:five_prime_UTR 35.0%
!! CATAGATTTTAAGAGAGGTG+AGG - chr2_1:72943804-72943823 Msa0223400:five_prime_UTR 35.0%
!! GTCATTTTATCTTCCATGCA+GGG + chr2_1:72943863-72943882 None:intergenic 35.0%
AAAGTTTCATAAAAACGGCG+AGG - chr2_1:72943912-72943931 Msa0223400:five_prime_UTR 35.0%
CTGTACAAAATGTTGCTATG+TGG - chr2_1:72943955-72943974 Msa0223400:five_prime_UTR 35.0%
! AAGAACCCCTATTAGGGTTT+TGG + chr2_1:72938005-72938024 None:intergenic 40.0%
GATGAAAGCGATGAAATTGG+CGG + chr2_1:72938049-72938068 None:intergenic 40.0%
TTGAGGGTTAAGTGTAGTGA+TGG - chr2_1:72938432-72938451 Msa0223400:intron 40.0%
TGAGGGTTAAGTGTAGTGAT+GGG - chr2_1:72938433-72938452 Msa0223400:intron 40.0%
TGTTGTCTGATATGGGTAGA+AGG - chr2_1:72938492-72938511 Msa0223400:intron 40.0%
! AAGTTTTCCGGGAATGGTTT+TGG - chr2_1:72938737-72938756 Msa0223400:CDS 40.0%
! CAATCCTCCTTTGATAGCAA+AGG + chr2_1:72938845-72938864 None:intergenic 40.0%
! CTTTGCTATCAAAGGAGGAT+TGG - chr2_1:72938843-72938862 Msa0223400:intron 40.0%
! AGGTTTTCGCAGAGACTAAA+AGG - chr2_1:72938866-72938885 Msa0223400:intron 40.0%
! TTTTCGCAGAGACTAAAAGG+CGG - chr2_1:72938869-72938888 Msa0223400:intron 40.0%
CAATTGGTGGAATTGGAGAT+AGG - chr2_1:72938900-72938919 Msa0223400:intron 40.0%
GTTAATGGAGCTGATGAGAA+TGG - chr2_1:72938929-72938948 Msa0223400:intron 40.0%
CAATAGGAAAAGAGAGACTG+AGG - chr2_1:72938988-72939007 Msa0223400:intron 40.0%
! GAGCCTTGCAGAAATTTTTC+AGG - chr2_1:72939102-72939121 Msa0223400:intron 40.0%
GCACCTGAAAAATTTCTGCA+AGG + chr2_1:72939108-72939127 None:intergenic 40.0%
TTCATCAAATGCGTTACGAC+TGG + chr2_1:72939595-72939614 None:intergenic 40.0%
TCCAAATCTCAAACCATCAG+TGG + chr2_1:72939679-72939698 None:intergenic 40.0%
GCATAAGAATATGAAGCCTG+TGG + chr2_1:72939741-72939760 None:intergenic 40.0%
TATTCTTATGCTGCTGCACT+TGG - chr2_1:72939750-72939769 Msa0223400:intron 40.0%
ATGTCTCATCTGGCATCAAT+GGG - chr2_1:72939901-72939920 Msa0223400:intron 40.0%
GATATTGCATCTGCATTGTC+TGG - chr2_1:72939930-72939949 Msa0223400:intron 40.0%
! ACTCAACTTGTGATGGGAAA+TGG + chr2_1:72939995-72940014 None:intergenic 40.0%
CATCAGACTCAACTTGTGAT+GGG + chr2_1:72940001-72940020 None:intergenic 40.0%
ACATCAGACTCAACTTGTGA+TGG + chr2_1:72940002-72940021 None:intergenic 40.0%
GCAGCACGCATATTTAAAGA+AGG - chr2_1:72940076-72940095 Msa0223400:CDS 40.0%
CACTTCTCTTACCTGAATCA+GGG + chr2_1:72940133-72940152 None:intergenic 40.0%
AATTAGAACCATCTGAAGGC+TGG + chr2_1:72940295-72940314 None:intergenic 40.0%
GGTGAATTAGAACCATCTGA+AGG + chr2_1:72940299-72940318 None:intergenic 40.0%
GCATATTACCAGTTCCAAGT+TGG + chr2_1:72940388-72940407 None:intergenic 40.0%
! TGCAGCAACGTTTTCAAACA+GGG + chr2_1:72940414-72940433 None:intergenic 40.0%
AATTCTTGAGTCCATTCCAG+GGG + chr2_1:72940453-72940472 None:intergenic 40.0%
GAATTCTTGAGTCCATTCCA+GGG + chr2_1:72940454-72940473 None:intergenic 40.0%
AGAATTCTTGAGTCCATTCC+AGG + chr2_1:72940455-72940474 None:intergenic 40.0%
! GGAATGGACTCAAGAATTCT+TGG - chr2_1:72940455-72940474 Msa0223400:intron 40.0%
ATGGACTCAAGAATTCTTGG+AGG - chr2_1:72940458-72940477 Msa0223400:intron 40.0%
TGTGCATGTTCTCAGTAGAA+TGG - chr2_1:72940514-72940533 Msa0223400:intron 40.0%
GTGCATGTTCTCAGTAGAAT+GGG - chr2_1:72940515-72940534 Msa0223400:intron 40.0%
ATGGGAAATCAAATTGCAGG+TGG - chr2_1:72940533-72940552 Msa0223400:CDS 40.0%
CGATGTATCTTCAGTACATG+AGG - chr2_1:72940582-72940601 Msa0223400:CDS 40.0%
! GAGCTTCAGAAAGCATATCT+TGG - chr2_1:72940695-72940714 Msa0223400:intron 40.0%
CAATACAATGTTCCATTGGG+TGG - chr2_1:72940743-72940762 Msa0223400:CDS 40.0%
GTGGATAAAGAGTTTGCCAT+TGG + chr2_1:72940845-72940864 None:intergenic 40.0%
TCTTTATCCACTTCTCCAGT+TGG - chr2_1:72940854-72940873 Msa0223400:intron 40.0%
TTCAGGTCATTGTGCCTAAT+AGG + chr2_1:72940890-72940909 None:intergenic 40.0%
!!! TGCATTTTGCTTCTGGAATG+AGG - chr2_1:72940912-72940931 Msa0223400:intron 40.0%
CTGGTCATGTTGTTGAATTC+AGG - chr2_1:72941059-72941078 Msa0223400:CDS 40.0%
!! ATTGGCAGTGCTGATCAATA+TGG - chr2_1:72941169-72941188 Msa0223400:CDS 40.0%
!! TTGGCAGTGCTGATCAATAT+GGG - chr2_1:72941170-72941189 Msa0223400:CDS 40.0%
!!! ATCTGGCAGTTTTTTGAGCA+TGG - chr2_1:72941387-72941406 Msa0223400:CDS 40.0%
GAGTTAGCCAACAAGCTTTA+TGG - chr2_1:72941429-72941448 Msa0223400:CDS 40.0%
AACATGGCCATAAAGCTTGT+TGG + chr2_1:72941439-72941458 None:intergenic 40.0%
CTCGACAACCATACATTTGA+AGG + chr2_1:72941473-72941492 None:intergenic 40.0%
GTCCAGATCAACAACTTCTA+TGG + chr2_1:72941605-72941624 None:intergenic 40.0%
ACACTATCAACCCATCCATA+TGG - chr2_1:72941775-72941794 Msa0223400:CDS 40.0%
ACATCTTTACCTGTATCACC+CGG + chr2_1:72941804-72941823 None:intergenic 40.0%
TTTAGGAGCAGTTAGCATGT+TGG - chr2_1:72941952-72941971 Msa0223400:CDS 40.0%
ATAGTTGCCATACTGATCCT+GGG + chr2_1:72941978-72941997 None:intergenic 40.0%
!! ACAGAGAGTACTGTATGTGA+TGG + chr2_1:72942309-72942328 None:intergenic 40.0%
TGGAGAAGCAACTAGAAGTT+TGG + chr2_1:72942509-72942528 None:intergenic 40.0%
ATGATTGTAGAACGCTCATG+AGG + chr2_1:72942645-72942664 None:intergenic 40.0%
TGAGCGTTCTACAATCATCA+AGG - chr2_1:72942647-72942666 Msa0223400:intron 40.0%
GAAGTTTGCCTCTAATGTTG+TGG - chr2_1:72942704-72942723 Msa0223400:intron 40.0%
ACACTTCTCCACAACATTAG+AGG + chr2_1:72942715-72942734 None:intergenic 40.0%
AAGCTGGATGTTGTCCAAAT+AGG - chr2_1:72942877-72942896 Msa0223400:intron 40.0%
AGCTGGATGTTGTCCAAATA+GGG - chr2_1:72942878-72942897 Msa0223400:intron 40.0%
GGATTATTGCAGACCCTATT+TGG + chr2_1:72942894-72942913 None:intergenic 40.0%
CAAACCAAATATTCGCCTCT+TGG + chr2_1:72942915-72942934 None:intergenic 40.0%
CATCATTGCCTGCATATAAG+AGG + chr2_1:72943250-72943269 None:intergenic 40.0%
! TTATGTTGTACAGAAGGTGC+TGG - chr2_1:72943287-72943306 Msa0223400:CDS 40.0%
AGCGACAATATGTTTCCCAT+AGG + chr2_1:72943388-72943407 None:intergenic 40.0%
!! ACGTGTAATTTGTTGCAGAG+AGG - chr2_1:72943569-72943588 Msa0223400:five_prime_UTR 40.0%
TCAGTCTCCTCATACTACTT+AGG - chr2_1:72943603-72943622 Msa0223400:five_prime_UTR 40.0%
CAGTCTCCTCATACTACTTA+GGG - chr2_1:72943604-72943623 Msa0223400:five_prime_UTR 40.0%
AGTCTCCTCATACTACTTAG+GGG - chr2_1:72943605-72943624 Msa0223400:five_prime_UTR 40.0%
TCTTTGATGCAGGAGAACAA+AGG + chr2_1:72943681-72943700 None:intergenic 40.0%
GAGGTTCAGATGTGTGATTA+TGG - chr2_1:72943823-72943842 Msa0223400:five_prime_UTR 40.0%
!! GGTCATTTTATCTTCCATGC+AGG + chr2_1:72943864-72943883 None:intergenic 40.0%
!! TTTCAGCTCGTAGCGTTGAT+GGG - chr2_1:72938267-72938286 Msa0223400:three_prime_UTR 45.0%
!! TGTAGTGATGGGTAGTGATC+AGG - chr2_1:72938444-72938463 Msa0223400:intron 45.0%
TCATTACCACCACCAATCAC+TGG + chr2_1:72938518-72938537 None:intergenic 45.0%
!! AGTGATTGGTGGTGGTAATG+AGG - chr2_1:72938517-72938536 Msa0223400:intron 45.0%
!! GTGATTGGTGGTGGTAATGA+GGG - chr2_1:72938518-72938537 Msa0223400:intron 45.0%
! GTTGTTTGGAGGTGGTTCTA+CGG - chr2_1:72938691-72938710 Msa0223400:CDS 45.0%
! GCTGCAGTTTCGAAGTTTTC+CGG - chr2_1:72938725-72938744 Msa0223400:CDS 45.0%
! CTGCAGTTTCGAAGTTTTCC+GGG - chr2_1:72938726-72938745 Msa0223400:CDS 45.0%
! GTTTCGAAGTTTTCCGGGAA+TGG - chr2_1:72938731-72938750 Msa0223400:CDS 45.0%
CTCAGAACCAAAACCATTCC+CGG + chr2_1:72938747-72938766 None:intergenic 45.0%
!! TTGGTTCTGAGGAAGAGCTT+AGG - chr2_1:72938756-72938775 Msa0223400:intron 45.0%
! TCCTCCTCCTTTGCTATCAA+AGG - chr2_1:72938835-72938854 Msa0223400:intron 45.0%
! TCCTTTGATAGCAAAGGAGG+AGG + chr2_1:72938839-72938858 None:intergenic 45.0%
! TCCTCCTTTGCTATCAAAGG+AGG - chr2_1:72938838-72938857 Msa0223400:intron 45.0%
! TCCTCCTTTGATAGCAAAGG+AGG + chr2_1:72938842-72938861 None:intergenic 45.0%
TGCTATCAAAGGAGGATTGG+AGG - chr2_1:72938846-72938865 Msa0223400:intron 45.0%
GCTTCTGCAATTGGTGGAAT+TGG - chr2_1:72938893-72938912 Msa0223400:intron 45.0%
TTGGTGGAATTGGAGATAGG+AGG - chr2_1:72938903-72938922 Msa0223400:intron 45.0%
TGGAATTGGAGATAGGAGGA+AGG - chr2_1:72938907-72938926 Msa0223400:intron 45.0%
GGAGATAGGAGGAAGGTTAA+TGG - chr2_1:72938914-72938933 Msa0223400:intron 45.0%
AATGGAGCTGATGAGAATGG+TGG - chr2_1:72938932-72938951 Msa0223400:intron 45.0%
! TGATGAGAATGGTGGAAGAG+CGG - chr2_1:72938940-72938959 Msa0223400:intron 45.0%
TTCCTATTGTTAAACCCCGG+AGG + chr2_1:72938977-72938996 None:intergenic 45.0%
TAGGAAAAGAGAGACTGAGG+CGG - chr2_1:72938991-72939010 Msa0223400:intron 45.0%
GTGGCTGATGAGAAAACTAG+AGG - chr2_1:72939013-72939032 Msa0223400:intron 45.0%
AAACTAGAGGTTCTGCTGAG+TGG - chr2_1:72939026-72939045 Msa0223400:intron 45.0%
AACTAGAGGTTCTGCTGAGT+GGG - chr2_1:72939027-72939046 Msa0223400:intron 45.0%
! TGCATTCGTTTCCTTTTCCC+TGG - chr2_1:72939149-72939168 Msa0223400:intron 45.0%
TCGCTAGAAGAAAAAGGGTC+TGG + chr2_1:72939498-72939517 None:intergenic 45.0%
AGTGATTGTGCAGGATGACA+TGG - chr2_1:72939530-72939549 Msa0223400:intron 45.0%
GTGATTGTGCAGGATGACAT+GGG - chr2_1:72939531-72939550 Msa0223400:intron 45.0%
! GCCACTGATGGTTTGAGATT+TGG - chr2_1:72939675-72939694 Msa0223400:intron 45.0%
AGGAGTAGTGCTTCGTGATA+GGG + chr2_1:72939784-72939803 None:intergenic 45.0%
ACAACTCTCCCACTACCAAT+AGG + chr2_1:72939849-72939868 None:intergenic 45.0%
TTGATGCCAGATGAGACATC+AGG + chr2_1:72939900-72939919 None:intergenic 45.0%
GATGTCTCATCTGGCATCAA+TGG - chr2_1:72939900-72939919 Msa0223400:intron 45.0%
TCAACAGATGACGTGCTAGA+AGG - chr2_1:72939963-72939982 Msa0223400:intron 45.0%
! TTTTGGTATGCAAGGTGGTC+AGG - chr2_1:72940043-72940062 Msa0223400:CDS 45.0%
!! GAATCAGGGTGAGCTGTTTT+CGG + chr2_1:72940119-72940138 None:intergenic 45.0%
AAAACAGCTCACCCTGATTC+AGG - chr2_1:72940119-72940138 Msa0223400:intron 45.0%
CCACTTCTCTTACCTGAATC+AGG + chr2_1:72940134-72940153 None:intergenic 45.0%
CCTGATTCAGGTAAGAGAAG+TGG - chr2_1:72940131-72940150 Msa0223400:intron 45.0%
TCAGGTAAGAGAAGTGGAAG+CGG - chr2_1:72940137-72940156 Msa0223400:intron 45.0%
AGACATGAGAAGTCCATCCT+TGG - chr2_1:72940163-72940182 Msa0223400:intron 45.0%
TGAGAAGTCCATCCTTGGAT+AGG - chr2_1:72940168-72940187 Msa0223400:intron 45.0%
AACCACCTCCACCACTATAA+GGG + chr2_1:72940259-72940278 None:intergenic 45.0%
AAACCACCTCCACCACTATA+AGG + chr2_1:72940260-72940279 None:intergenic 45.0%
AATAACTATGGCCTGAGTGG+TGG - chr2_1:72940323-72940342 Msa0223400:CDS 45.0%
ATAACTATGGCCTGAGTGGT+GGG - chr2_1:72940324-72940343 Msa0223400:CDS 45.0%
TCCTTCATGGCTAACCAACT+TGG - chr2_1:72940371-72940390 Msa0223400:CDS 45.0%
!! TCCAAGTTGGTTAGCCATGA+AGG + chr2_1:72940375-72940394 None:intergenic 45.0%
ATGGCTAACCAACTTGGAAC+TGG - chr2_1:72940377-72940396 Msa0223400:CDS 45.0%
! GCAGCAACGTTTTCAAACAG+GGG + chr2_1:72940413-72940432 None:intergenic 45.0%
! CTGCAGCAACGTTTTCAAAC+AGG + chr2_1:72940415-72940434 None:intergenic 45.0%
GACTCAAGAATTCTTGGAGG+TGG - chr2_1:72940461-72940480 Msa0223400:intron 45.0%
CTGAGAACATGCACATCAGA+TGG + chr2_1:72940509-72940528 None:intergenic 45.0%
AAGTTGTGCAGCAGCATACT+CGG + chr2_1:72940612-72940631 None:intergenic 45.0%
TTAACGACCCATCTGTAGAC+AGG - chr2_1:72940639-72940658 Msa0223400:intron 45.0%
GTTCCATTGGGTGGTAAATC+CGG - chr2_1:72940752-72940771 Msa0223400:CDS 45.0%
GGAAATCCTGCATATGGTGT+TGG - chr2_1:72940800-72940819 Msa0223400:CDS 45.0%
GACAAACCAACACCATATGC+AGG + chr2_1:72940809-72940828 None:intergenic 45.0%
!! GGTGTTGGTTTGTCTTATCC+AGG - chr2_1:72940815-72940834 Msa0223400:CDS 45.0%
GTCTTATCCAGGAAGTCCAA+TGG - chr2_1:72940826-72940845 Msa0223400:CDS 45.0%
TTGGATCTGGCAGTCCTATT+AGG - chr2_1:72940873-72940892 Msa0223400:intron 45.0%
! TCTGGAATGAGGAATGTAGC+TGG - chr2_1:72940923-72940942 Msa0223400:intron 45.0%
CTGGAATGAGGAATGTAGCT+GGG - chr2_1:72940924-72940943 Msa0223400:intron 45.0%
TGGAATGAGGAATGTAGCTG+GGG - chr2_1:72940925-72940944 Msa0223400:intron 45.0%
CATCTACGTTTCCAGCATCT+AGG + chr2_1:72940967-72940986 None:intergenic 45.0%
! ATAGCGTGGTGATGTTCTGA+TGG - chr2_1:72941093-72941112 Msa0223400:CDS 45.0%
! GTCATCAAAGCAAGAGCATG+TGG + chr2_1:72941268-72941287 None:intergenic 45.0%
! GCTTTGATGACCGATGTCTT+TGG - chr2_1:72941277-72941296 Msa0223400:CDS 45.0%
GTTGGCTAACTCTCTTCTCT+GGG + chr2_1:72941421-72941440 None:intergenic 45.0%
! TGTTGGCTAACTCTCTTCTC+TGG + chr2_1:72941422-72941441 None:intergenic 45.0%
GAAGGCTAAGTGTCAGAACA+TGG + chr2_1:72941455-72941474 None:intergenic 45.0%
GGCCATAGAAGTTGTTGATC+TGG - chr2_1:72941600-72941619 Msa0223400:CDS 45.0%
! ATTTGCATGGCAGAGAGTAC+TGG - chr2_1:72941883-72941902 Msa0223400:CDS 45.0%
CATAGTTGCCATACTGATCC+TGG + chr2_1:72941979-72941998 None:intergenic 45.0%
TCAACAAGTCTGGCAAGCAA+TGG + chr2_1:72942047-72942066 None:intergenic 45.0%
! CGCTTCTCTTCGTGTTTTTC+TGG - chr2_1:72942198-72942217 Msa0223400:CDS 45.0%
TAACAGCATGTGCTTGAGCA+TGG - chr2_1:72942615-72942634 Msa0223400:intron 45.0%
AACAGCATGTGCTTGAGCAT+GGG - chr2_1:72942616-72942635 Msa0223400:intron 45.0%
CATTAGAGGCAAACTTCTGC+TGG + chr2_1:72942701-72942720 None:intergenic 45.0%
!! GTGGAGAAGTGTTTGACCTT+TGG - chr2_1:72942723-72942742 Msa0223400:intron 45.0%
!! GAGAAGTGTTTGACCTTTGG+AGG - chr2_1:72942726-72942745 Msa0223400:intron 45.0%
ACAAGCAATAGGCGTTCAGA+AGG + chr2_1:72942753-72942772 None:intergenic 45.0%
GGATGAAAATGAGCCTCTTC+AGG - chr2_1:72942794-72942813 Msa0223400:intron 45.0%
AGGGTCTGCAATAATCCAAG+AGG - chr2_1:72942897-72942916 Msa0223400:intron 45.0%
!! GTAGAGAAACTTGTTGCTGC+CGG - chr2_1:72943411-72943430 Msa0223400:CDS 45.0%
TCCTCATACTACTTAGGGGA+GGG - chr2_1:72943609-72943628 Msa0223400:five_prime_UTR 45.0%
GTTGTCTGTACAGCTAACTG+AGG - chr2_1:72943640-72943659 Msa0223400:five_prime_UTR 45.0%
TGATGCAGGAGAACAAAGGA+GGG + chr2_1:72943677-72943696 None:intergenic 45.0%
TTGATGCAGGAGAACAAAGG+AGG + chr2_1:72943678-72943697 None:intergenic 45.0%
!! TGTGATGGATAGTAGCCGAT+TGG - chr2_1:72943731-72943750 Msa0223400:five_prime_UTR 45.0%
! GTTTCAGCTCGTAGCGTTGA+TGG - chr2_1:72938266-72938285 Msa0223400:three_prime_UTR 50.0%
!! TTCAGCTCGTAGCGTTGATG+GGG - chr2_1:72938268-72938287 Msa0223400:three_prime_UTR 50.0%
ATGGGTAGAAGGCCAGTGAT+TGG - chr2_1:72938503-72938522 Msa0223400:intron 50.0%
! GGTGGTAATGAGGGTTCGTT+TGG - chr2_1:72938527-72938546 Msa0223400:intron 50.0%
! GGATGTTGCTTCGCGATCAA+CGG - chr2_1:72938573-72938592 Msa0223400:intron 50.0%
GTTCGTTGAGTGCAGTTGGA+GGG - chr2_1:72938669-72938688 Msa0223400:CDS 50.0%
AGTGCAGTTGGAGGGTTGTT+TGG - chr2_1:72938677-72938696 Msa0223400:CDS 50.0%
!!! CGGGAATGGTTTTGGTTCTG+AGG - chr2_1:72938745-72938764 Msa0223400:CDS 50.0%
AGCAAAGGAGGAGGAAGTCT+GGG + chr2_1:72938830-72938849 None:intergenic 50.0%
TAGCAAAGGAGGAGGAAGTC+TGG + chr2_1:72938831-72938850 None:intergenic 50.0%
AAAGGCGGAGCTTCTGCAAT+TGG - chr2_1:72938884-72938903 Msa0223400:intron 50.0%
CACCTCCGGGGTTTAACAAT+AGG - chr2_1:72938972-72938991 Msa0223400:intron 50.0%
ACTAGAGGTTCTGCTGAGTG+GGG - chr2_1:72939028-72939047 Msa0223400:intron 50.0%
!! CTCATTGGTTTGCCAGGACT+AGG - chr2_1:72939061-72939080 Msa0223400:intron 50.0%
GTTTGCCAGGACTAGGTCTT+GGG - chr2_1:72939068-72939087 Msa0223400:intron 50.0%
TTAGTCCCAAGACCTAGTCC+TGG + chr2_1:72939076-72939095 None:intergenic 50.0%
GGACATAACACCTCTGTCAC+AGG - chr2_1:72939552-72939571 Msa0223400:intron 50.0%
TCAAATGCGTTACGACTGGC+TGG + chr2_1:72939591-72939610 None:intergenic 50.0%
TCTCAAACCATCAGTGGCTG+AGG + chr2_1:72939673-72939692 None:intergenic 50.0%
TCACCTGCTTCCCAAAATGC+TGG - chr2_1:72939714-72939733 Msa0223400:intron 50.0%
TTCCCAAAATGCTGGTCCAC+AGG - chr2_1:72939722-72939741 Msa0223400:intron 50.0%
! AGCCTGTGGACCAGCATTTT+GGG + chr2_1:72939727-72939746 None:intergenic 50.0%
! AAGCCTGTGGACCAGCATTT+TGG + chr2_1:72939728-72939747 None:intergenic 50.0%
TCTTATGCTGCTGCACTTGG+TGG - chr2_1:72939753-72939772 Msa0223400:intron 50.0%
CAGGAGTAGTGCTTCGTGAT+AGG + chr2_1:72939785-72939804 None:intergenic 50.0%
TGATCCACAACACGTTGCCA+GGG - chr2_1:72939803-72939822 Msa0223400:intron 50.0%
TCCCACTACCAATAGGTGTG+GGG + chr2_1:72939842-72939861 None:intergenic 50.0%
CTCCCACTACCAATAGGTGT+GGG + chr2_1:72939843-72939862 None:intergenic 50.0%
TCTCCCACTACCAATAGGTG+TGG + chr2_1:72939844-72939863 None:intergenic 50.0%
GTTGTTGCTGCTGAGAAGAG+AGG - chr2_1:72939864-72939883 Msa0223400:intron 50.0%
ACCAGTCCTGATGTCTCATC+TGG - chr2_1:72939891-72939910 Msa0223400:intron 50.0%
ATGCAAGGTGGTCAGGATCA+TGG - chr2_1:72940050-72940069 Msa0223400:CDS 50.0%
CAGGTAAGAGAAGTGGAAGC+GGG - chr2_1:72940138-72940157 Msa0223400:intron 50.0%
AAGTCCATCCTTGGATAGGC+AGG - chr2_1:72940172-72940191 Msa0223400:intron 50.0%
ACCACCTCCACCACTATAAG+GGG + chr2_1:72940258-72940277 None:intergenic 50.0%
TCTGAAGGCTGGTATTGTGC+AGG + chr2_1:72940284-72940303 None:intergenic 50.0%
GCACAATACCAGCCTTCAGA+TGG - chr2_1:72940284-72940303 Msa0223400:CDS 50.0%
GTATGCTGGAAATCCTGCTG+TGG - chr2_1:72940346-72940365 Msa0223400:CDS 50.0%
! GCAACGTTTTCAAACAGGGG+TGG + chr2_1:72940410-72940429 None:intergenic 50.0%
GATGGAGAAGCAACTCCAGA+GGG + chr2_1:72940491-72940510 None:intergenic 50.0%
AGATGGAGAAGCAACTCCAG+AGG + chr2_1:72940492-72940511 None:intergenic 50.0%
AGTTGTGCAGCAGCATACTC+GGG + chr2_1:72940611-72940630 None:intergenic 50.0%
ACCATGATGGTTGGAACCAC+CGG + chr2_1:72940774-72940793 None:intergenic 50.0%
GAGTTTGCCATTGGACTTCC+TGG + chr2_1:72940836-72940855 None:intergenic 50.0%
TCCACTTCTCCAGTTGGATC+TGG - chr2_1:72940860-72940879 Msa0223400:intron 50.0%
ATAGGACTGCCAGATCCAAC+TGG + chr2_1:72940872-72940891 None:intergenic 50.0%
TTTCCAGCATCTAGGTGCCA+TGG + chr2_1:72940959-72940978 None:intergenic 50.0%
! GTGCTGATCAATATGGGAGC+CGG - chr2_1:72941176-72941195 Msa0223400:CDS 50.0%
TGGTTGTCGAGTCATCCAGA+AGG - chr2_1:72941482-72941501 Msa0223400:CDS 50.0%
CGCTGTGTACGAGATCAGAA+TGG - chr2_1:72941667-72941686 Msa0223400:CDS 50.0%
CAACCCATCCATATGGTTGC+CGG - chr2_1:72941782-72941801 Msa0223400:CDS 50.0%
AACCCATCCATATGGTTGCC+GGG - chr2_1:72941783-72941802 Msa0223400:CDS 50.0%
TGTATCACCCGGCAACCATA+TGG + chr2_1:72941793-72941812 None:intergenic 50.0%
ATATGGTTGCCGGGTGATAC+AGG - chr2_1:72941792-72941811 Msa0223400:CDS 50.0%
ATGTTGGCCCAGGATCAGTA+TGG - chr2_1:72941968-72941987 Msa0223400:CDS 50.0%
GTATGGCAACTATGTCGTCC+AGG - chr2_1:72941985-72942004 Msa0223400:CDS 50.0%
AAGTCCTCGGAATATGCACC+AGG + chr2_1:72942954-72942973 None:intergenic 50.0%
GCATGGAACGCAACTAGCAA+CGG + chr2_1:72943508-72943527 None:intergenic 50.0%
CTCCTCATACTACTTAGGGG+AGG - chr2_1:72943608-72943627 Msa0223400:five_prime_UTR 50.0%
GATGCAGGAGAACAAAGGAG+GGG + chr2_1:72943676-72943695 None:intergenic 50.0%
! AATTGGCGGCGATTGGTTGC+TGG + chr2_1:72938035-72938054 None:intergenic 55.0%
GCGATGAAATTGGCGGCGAT+TGG + chr2_1:72938042-72938061 None:intergenic 55.0%
GGTAGAAGGCCAGTGATTGG+TGG - chr2_1:72938506-72938525 Msa0223400:intron 55.0%
AGAAGGCCAGTGATTGGTGG+TGG - chr2_1:72938509-72938528 Msa0223400:intron 55.0%
TGGATCAGCTCCTCCAACTG+TGG - chr2_1:72938643-72938662 Msa0223400:CDS 55.0%
ATCAGCTCCTCCAACTGTGG+AGG - chr2_1:72938646-72938665 Msa0223400:CDS 55.0%
TCAGCTCCTCCAACTGTGGA+GGG - chr2_1:72938647-72938666 Msa0223400:CDS 55.0%
AACGAACCCTCCACAGTTGG+AGG + chr2_1:72938656-72938675 None:intergenic 55.0%
CTCAACGAACCCTCCACAGT+TGG + chr2_1:72938659-72938678 None:intergenic 55.0%
GAGGGTTCGTTGAGTGCAGT+TGG - chr2_1:72938665-72938684 Msa0223400:CDS 55.0%
GGTTCGTTGAGTGCAGTTGG+AGG - chr2_1:72938668-72938687 Msa0223400:CDS 55.0%
GCAGTTGGAGGGTTGTTTGG+AGG - chr2_1:72938680-72938699 Msa0223400:CDS 55.0%
GTTGGAGGGTTGTTTGGAGG+TGG - chr2_1:72938683-72938702 Msa0223400:CDS 55.0%
! AGCGGTGTTTGCTACACCTC+CGG - chr2_1:72938958-72938977 Msa0223400:intron 55.0%
GAAAAGAGAGACTGAGGCGG+TGG - chr2_1:72938994-72939013 Msa0223400:intron 55.0%
!! GATGGGCTCATTGGTTTGCC+AGG - chr2_1:72939055-72939074 Msa0223400:intron 55.0%
GGTTTGCCAGGACTAGGTCT+TGG - chr2_1:72939067-72939086 Msa0223400:intron 55.0%
AGACGGAAAGCCTGTGACAG+AGG + chr2_1:72939565-72939584 None:intergenic 55.0%
! TTACGACTGGCTGGACGAGA+CGG + chr2_1:72939582-72939601 None:intergenic 55.0%
ATCCTCTGCAGAAGCAGAGC+TGG - chr2_1:72939629-72939648 Msa0223400:intron 55.0%
CATCAGTGGCTGAGGAGTCA+TGG + chr2_1:72939665-72939684 None:intergenic 55.0%
CATGACTCCTCAGCCACTGA+TGG - chr2_1:72939663-72939682 Msa0223400:intron 55.0%
!! GGACCAGCATTTTGGGAAGC+AGG + chr2_1:72939720-72939739 None:intergenic 55.0%
CTGGCAACGTGTTGTGGATC+AGG + chr2_1:72939804-72939823 None:intergenic 55.0%
CTGATCCACAACACGTTGCC+AGG - chr2_1:72939802-72939821 Msa0223400:intron 55.0%
ATAGGTGTGGGGCAAGGACT+GGG + chr2_1:72939831-72939850 None:intergenic 55.0%
AATAGGTGTGGGGCAAGGAC+TGG + chr2_1:72939832-72939851 None:intergenic 55.0%
AGTCCTTGCCCCACACCTAT+TGG - chr2_1:72939831-72939850 Msa0223400:intron 55.0%
CTACCAATAGGTGTGGGGCA+AGG + chr2_1:72939837-72939856 None:intergenic 55.0%
TGCCCCACACCTATTGGTAG+TGG - chr2_1:72939837-72939856 Msa0223400:intron 55.0%
! GCCCCACACCTATTGGTAGT+GGG - chr2_1:72939838-72939857 Msa0223400:intron 55.0%
GCCAGATGAGACATCAGGAC+TGG + chr2_1:72939895-72939914 None:intergenic 55.0%
TCGACCTGCCTATCCAAGGA+TGG + chr2_1:72940179-72940198 None:intergenic 55.0%
ATGCTCGACCTGCCTATCCA+AGG + chr2_1:72940183-72940202 None:intergenic 55.0%
TCACCTGGCTCCCCTTATAG+TGG - chr2_1:72940245-72940264 Msa0223400:CDS 55.0%
! TCCCCTTATAGTGGTGGAGG+TGG - chr2_1:72940254-72940273 Msa0223400:CDS 55.0%
TTCCAGCATACCCACCACTC+AGG + chr2_1:72940337-72940356 None:intergenic 55.0%
TCCTGCTGTGGCATCCTTCA+TGG - chr2_1:72940358-72940377 Msa0223400:CDS 55.0%
CGTTGCTGCAGCATCAGCTA+TGG - chr2_1:72940424-72940443 Msa0223400:intron 55.0%
CCACCGGATTTACCACCCAA+TGG + chr2_1:72940758-72940777 None:intergenic 55.0%
CCATTGGGTGGTAAATCCGG+TGG - chr2_1:72940755-72940774 Msa0223400:CDS 55.0%
TCCGGTGGTTCCAACCATCA+TGG - chr2_1:72940770-72940789 Msa0223400:CDS 55.0%
GCCAGATCCAACTGGAGAAG+TGG + chr2_1:72940864-72940883 None:intergenic 55.0%
! ATCTAGGTGCCATGGTGCCA+TGG + chr2_1:72940951-72940970 None:intergenic 55.0%
CACCCGGCAACCATATGGAT+GGG + chr2_1:72941788-72941807 None:intergenic 55.0%
TCACCCGGCAACCATATGGA+TGG + chr2_1:72941789-72941808 None:intergenic 55.0%
AGCAGTTAGCATGTTGGCCC+AGG - chr2_1:72941958-72941977 Msa0223400:CDS 55.0%
! ACACGAAGAGAAGCGCAGCT+GGG + chr2_1:72942193-72942212 None:intergenic 55.0%
! AACACGAAGAGAAGCGCAGC+TGG + chr2_1:72942194-72942213 None:intergenic 55.0%
GCGTTCAGAAGGACCTCCAA+AGG + chr2_1:72942742-72942761 None:intergenic 55.0%
!! GAGAAACTTGTTGCTGCCGG+AGG - chr2_1:72943414-72943433 Msa0223400:CDS 55.0%
TGGAACGCAACTAGCAACGG+CGG + chr2_1:72943505-72943524 None:intergenic 55.0%
GCCCTCCCCTAAGTAGTATG+AGG + chr2_1:72943613-72943632 None:intergenic 55.0%
ACACCTCTGATGTCCCTGCA+TGG - chr2_1:72943847-72943866 Msa0223400:five_prime_UTR 55.0%
CTTCCATGCAGGGACATCAG+AGG + chr2_1:72943853-72943872 None:intergenic 55.0%
TCGCGATCAACGGCGTCATG+AGG - chr2_1:72938583-72938602 Msa0223400:intron 60.0%
GGCGGAGCTTCTGCAATTGG+TGG - chr2_1:72938887-72938906 Msa0223400:intron 60.0%
! GCGGTGTTTGCTACACCTCC+GGG - chr2_1:72938959-72938978 Msa0223400:intron 60.0%
! CGGTGTTTGCTACACCTCCG+GGG - chr2_1:72938960-72938979 Msa0223400:intron 60.0%
AGAGGTTCTGCTGAGTGGGG+TGG - chr2_1:72939031-72939050 Msa0223400:intron 60.0%
AGCCAGCTCTGCTTCTGCAG+AGG + chr2_1:72939634-72939653 None:intergenic 60.0%
CCACCACTATAAGGGGAGCC+AGG + chr2_1:72940251-72940270 None:intergenic 60.0%
CCTGGCTCCCCTTATAGTGG+TGG - chr2_1:72940248-72940267 Msa0223400:CDS 60.0%
GGCTCCCCTTATAGTGGTGG+AGG - chr2_1:72940251-72940270 Msa0223400:CDS 60.0%
GCCATGAAGGATGCCACAGC+AGG + chr2_1:72940362-72940381 None:intergenic 60.0%
AGCTATGGCGTCCCCTGGAA+TGG - chr2_1:72940439-72940458 Msa0223400:intron 60.0%
! CTTGGAGGTGGTTTGCCCTC+TGG - chr2_1:72940473-72940492 Msa0223400:intron 60.0%
GAGGAATGTAGCTGGGGCCA+TGG - chr2_1:72940931-72940950 Msa0223400:intron 60.0%
GCACCATGGCACCTAGATGC+TGG - chr2_1:72940953-72940972 Msa0223400:CDS 60.0%
GGAACGCAACTAGCAACGGC+GGG + chr2_1:72943504-72943523 None:intergenic 60.0%
TCTGCTGAGTGGGGTGGCGA+TGG - chr2_1:72939037-72939056 Msa0223400:intron 65.0%
CTGCTGAGTGGGGTGGCGAT+GGG - chr2_1:72939038-72939057 Msa0223400:intron 65.0%
! TGGGGTGGCGATGGGCTCAT+TGG - chr2_1:72939046-72939065 Msa0223400:intron 65.0%
GGAGCCCTGGCAACGTGTTG+TGG + chr2_1:72939810-72939829 None:intergenic 65.0%
!! GGCCTGAGTGGTGGGTATGC+TGG - chr2_1:72940332-72940351 Msa0223400:CDS 65.0%
GCATCAGCTATGGCGTCCCC+TGG - chr2_1:72940434-72940453 Msa0223400:intron 65.0%
TAGCTGGGGCCATGGCACCA+TGG - chr2_1:72940939-72940958 Msa0223400:intron 65.0%
GGGGCAAGGACTGGGAGCCC+TGG + chr2_1:72939823-72939842 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72937951 72944082 72937951 ID=Msa0223400;Name=Msa0223400
chr2_1 mRNA 72937951 72944082 72937951 ID=Msa0223400-mRNA-1;Parent=Msa0223400;Name=Msa0223400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=540|1|1|1|1|1|9|458|1050
chr2_1 exon 72937951 72938446 72937951 ID=Msa0223400-mRNA-1:exon:21221;Parent=Msa0223400-mRNA-1
chr2_1 exon 72938598 72938772 72938598 ID=Msa0223400-mRNA-1:exon:21220;Parent=Msa0223400-mRNA-1
chr2_1 exon 72939218 72939412 72939218 ID=Msa0223400-mRNA-1:exon:21219;Parent=Msa0223400-mRNA-1
chr2_1 exon 72940027 72940137 72940027 ID=Msa0223400-mRNA-1:exon:21218;Parent=Msa0223400-mRNA-1
chr2_1 exon 72940220 72940432 72940220 ID=Msa0223400-mRNA-1:exon:21217;Parent=Msa0223400-mRNA-1
chr2_1 exon 72940530 72940637 72940530 ID=Msa0223400-mRNA-1:exon:21216;Parent=Msa0223400-mRNA-1
chr2_1 exon 72940715 72940856 72940715 ID=Msa0223400-mRNA-1:exon:21215;Parent=Msa0223400-mRNA-1
chr2_1 exon 72940953 72942490 72940953 ID=Msa0223400-mRNA-1:exon:21214;Parent=Msa0223400-mRNA-1
chr2_1 exon 72942910 72944082 72942910 ID=Msa0223400-mRNA-1:exon:21213;Parent=Msa0223400-mRNA-1
chr2_1 five_prime_UTR 72943543 72944082 72943543 ID=Msa0223400-mRNA-1:five_prime_utr;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72942910 72943542 72942910 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72940953 72942490 72940953 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72940715 72940856 72940715 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72940530 72940637 72940530 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72940220 72940432 72940220 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72940027 72940137 72940027 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72939218 72939412 72939218 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72938598 72938772 72938598 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 CDS 72938409 72938446 72938409 ID=Msa0223400-mRNA-1:cds;Parent=Msa0223400-mRNA-1
chr2_1 three_prime_UTR 72937951 72938408 72937951 ID=Msa0223400-mRNA-1:three_prime_utr;Parent=Msa0223400-mRNA-1
Gene Sequence

>Msa0223400

ATGTTGTCTGATATGGGTAGAAGGCCAGTGATTGGTGGTGGTAATGAGGGTTCGTTTGGAGATGAATTTGAAAAGGAAATAGGGATGTTGCTTCGCGATCAACGGCGTCATGAGGTTGATGATCATGAACCTGAACTTAATTTGTATAGGAGTGGATCAGCTCCTCCAACTGTGGAGGGTTCGTTGAGTGCAGTTGGAGGGTTGTTTGGAGGTGGTTCTACGGCTGCTACTGCTGCTGCAGTTTCGAAGTTTTCCGGGAATGGTTTTGGTTCTGAGGAAGAGCTTAGGTCTGATCCTGCGTATCTTCAATATTATTACTCTAATGTTAATTTGAATCCCAGACTTCCTCCTCCTTTGCTATCAAAGGAGGATTGGAGGTTTTCGCAGAGACTAAAAGGCGGAGCTTCTGCAATTGGTGGAATTGGAGATAGGAGGAAGGTTAATGGAGCTGATGAGAATGGTGGAAGAGCGGTGTTTGCTACACCTCCGGGGTTTAACAATAGGAAAAGAGAGACTGAGGCGGTGGCTGATGAGAAAACTAGAGGTTCTGCTGAGTGGGGTGGCGATGGGCTCATTGGTTTGCCAGGACTAGGTCTTGGGACTAAACAAAAGAGCCTTGCAGAAATTTTTCAGGATGACATGGGACATAACACCTCTGTCACAGGCTTTCCGTCTCGTCCAGCCAGTCGTAACGCATTTGATGAAAATGTTGAGATTACATCCTCTGCAGAAGCAGAGCTGGCTCATTTGCGCCATGACTCCTCAGCCACTGATGGTTTGAGATTTGGATCAAATGTTCAGGGATCACCTGCTTCCCAAAATGCTGGTCCACAGGCTTCATATTCTTATGCTGCTGCACTTGGTGGTTCTTCCCTATCACGAAGCACTACTCCTGATCCACAACACGTTGCCAGGGCTCCCAGTCCTTGCCCCACACCTATTGGTAGTGGGAGAGTTGTTGCTGCTGAGAAGAGAGGTATTACCAGTCCTGATGTCTCATCTGGCATCAATGGGTCTGCAGATATTGCATCTGCATTGTCTGGCATGAATTTGTCAACAGATGACGTGCTAGAAGGCGATAACCATTTCCCATCACAAGTTGAGTCTGATGTTAATAATTATCAAAGATATCTTTTTGGTATGCAAGGTGGTCAGGATCATGGCAAGCAGCACGCATATTTAAAGAAGGCTGAATCAGGACACATGCCGAAAACAGCTCACCCTGATTCAGGTAAGAGAAGTGGAAGCGGGTCAGACATGAGAAGTCCATCCTTGGATAGGCAGGTCGAGCATCAAAAGTCTGCTGTTTCTCCCAACAACTTGTATTTCAATGGATCACCTGGCTCCCCTTATAGTGGTGGAGGTGGTTTGCCTGCACAATACCAGCCTTCAGATGGTTCTAATTCACCATTTAATAACTATGGCCTGAGTGGTGGGTATGCTGGAAATCCTGCTGTGGCATCCTTCATGGCTAACCAACTTGGAACTGGTAATATGCCACCCCTGTTTGAAAACGTTGCTGCAGCATCAGCTATGGCGTCCCCTGGAATGGACTCAAGAATTCTTGGAGGTGGTTTGCCCTCTGGAGTTGCTTCTCCATCTGATGTGCATGTTCTCAGTAGAATGGGAAATCAAATTGCAGGTGGTGCTCTTCAGTCTCCTTATGTTGATCCGATGTATCTTCAGTACATGAGGACACCCGAGTATGCTGCTGCACAACTTGCTGCTCTTAACGACCCATCTGTAGACAGGAATTACTTGGGCAACTCATATATGAATTTACTTGAGCTTCAGAAAGCATATCTTGGATCTCTGCTTTCACCTCAGAAGTCACAATACAATGTTCCATTGGGTGGTAAATCCGGTGGTTCCAACCATCATGGTTATTATGGAAATCCTGCATATGGTGTTGGTTTGTCTTATCCAGGAAGTCCAATGGCAAACTCTTTATCCACTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGACCTGAATATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGCCATGGCACCATGGCACCTAGATGCTGGAAACGTAGATGAAAATTTTGCTTCGTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACAAAGTGCTTTGAGCTTTCTGAAATTTCTGGTCATGTTGTTGAATTCAGTGCTGATCAATATGGGAGCCGGTTTATTCAACAAAAGCTTGAAACAGCAACCACTGAAGAAAAGAATATGGTTTATCAGGAAATCACGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAGAAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTTTATGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGTCGAGTCATCCAGAAGGCCATAGAAGTTGTTGATCTGGACCAGAAGATTAAAATGGTTCAAGAGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGCAACCATGTCATTCAGAAGTGTATTGAATGCGTACCTGAAGATGCAATTGATTTTATTGTCTCAACTTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGCCGGGTGATACAGAGAGTACTGGAGCATTGTGAAAACCCTGACACACAACAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTGGCCCAGGATCAGTATGGCAACTATGTCGTCCAGCATGTGCTTGAGCATGGGAAACCTCATGAGCGTTCTACAATCATCAAGGAATTAGCAGGCAATATAGTTCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTGGAGAAGTGTTTGACCTTTGGAGGTCCTTCTGAACGCCTATTGCTTGTAAATGAGATGCTTGGAACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAGTTTGCTAATTATGTTGTACAGAAGGTGCTGGAGACTTGTGATGACCAACAGCGTGAACTAATTCTTTCTCGAATTAAAGTTCATTTGAATGCATTGAAAAAGTACACCTATGGGAAACATATTGTCGCTCGTGTAGAGAAACTTGTTGCTGCCGGAGAGAGGAGAATTGCTGCTCAGTCTCCTCATACTACTTAG
Protein sequence

>Msa0223400

MLSDMGRRPVIGGGNEGSFGDEFEKEIGMLLRDQRRHEVDDHEPELNLYRSGSAPPTVEGSLSAVGGLFGGGSTAATAAAVSKFSGNGFGSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFSQRLKGGASAIGGIGDRRKVNGADENGGRAVFATPPGFNNRKRETEAVADEKTRGSAEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNAFDENVEITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQASYSYAAALGGSSLSRSTTPDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDVSSGINGSADIASALSGMNLSTDDVLEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHPDSGKRSGSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMASPGMDSRILGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGAMAPWHLDAGNVDENFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT*