AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259970 MtrunA17_Chr2g0328561 98.571 1050 12 2 1 1050 1 1047 0.0 2136
Msa0259970 MtrunA17_Chr4g0031951 80.435 1058 162 12 1 1048 1 1023 0.0 1637
Msa0259970 MtrunA17_Chr5g0435601 56.444 1063 372 25 1 1043 9 1000 0.0 1074
Msa0259970 MtrunA17_Chr1g0199451 46.147 1051 441 24 18 1042 18 969 0.0 825
Msa0259970 MtrunA17_Chr2g0298151 49.652 574 250 16 478 1032 420 973 4.27e-162 504
Msa0259970 MtrunA17_Chr2g0298151 26.616 263 185 3 781 1042 650 905 8.11e-27 118
Msa0259970 MtrunA17_Chr5g0425961 32.817 323 204 7 713 1030 393 707 5.72e-46 177
Msa0259970 MtrunA17_Chr1g0207641 25.852 352 246 7 700 1043 118 462 1.06e-27 118
Msa0259970 MtrunA17_Chr2g0279091 32.203 177 115 2 853 1029 21 192 9.79e-26 105
Msa0259970 MtrunA17_Chr2g0279091 23.636 165 124 1 719 881 31 195 1.43e-12 67.8
Msa0259970 MtrunA17_Chr3g0134501 25.952 289 203 5 713 996 209 491 3.20e-24 108
Msa0259970 MtrunA17_Chr1g0202811 24.922 321 221 7 720 1029 94 405 1.94e-21 98.2
Msa0259970 MtrunA17_Chr2g0279101 32.609 138 89 2 713 846 424 561 8.84e-19 91.7
Msa0259970 MtrunA17_Chr5g0425331 28.994 169 115 3 746 910 19 186 1.20e-15 76.3
Msa0259970 MtrunA17_Chr2g0277761 22.807 285 187 8 718 991 114 376 1.69e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259970 AT2G29190.2 60.569 1055 317 19 1 1046 1 965 0.0 1154
Msa0259970 AT2G29190.1 60.569 1055 317 19 1 1046 1 965 0.0 1154
Msa0259970 AT2G29200.1 60.377 1060 307 21 1 1046 1 961 0.0 1139
Msa0259970 AT2G29200.2 60.377 1060 307 21 1 1046 1 961 0.0 1139
Msa0259970 AT2G29140.2 59.357 1058 316 23 1 1046 2 957 0.0 1112
Msa0259970 AT2G29140.1 59.357 1058 316 23 1 1046 2 957 0.0 1112
Msa0259970 AT3G10360.1 59.144 514 184 8 535 1046 506 995 0.0 601
Msa0259970 AT3G20250.1 56.039 414 165 3 633 1034 491 899 1.62e-153 479
Msa0259970 AT3G20250.1 26.792 265 185 4 779 1042 573 829 1.90e-23 107
Msa0259970 AT3G20250.1 51.282 78 30 2 50 124 59 131 3.77e-15 80.9
Msa0259970 AT3G20250.3 56.039 414 165 3 633 1034 527 935 3.98e-153 479
Msa0259970 AT3G20250.3 26.792 265 185 4 779 1042 609 865 1.43e-23 108
Msa0259970 AT3G20250.3 51.282 78 30 2 50 124 59 131 3.92e-15 80.9
Msa0259970 AT3G20250.2 56.039 414 165 3 633 1034 527 935 3.98e-153 479
Msa0259970 AT3G20250.2 26.792 265 185 4 779 1042 609 865 1.43e-23 108
Msa0259970 AT3G20250.2 51.282 78 30 2 50 124 59 131 3.92e-15 80.9
Msa0259970 AT4G25880.4 59.226 336 137 0 698 1033 515 850 1.08e-138 439
Msa0259970 AT4G25880.1 59.226 336 137 0 698 1033 515 850 1.10e-138 439
Msa0259970 AT4G25880.5 59.226 336 137 0 698 1033 515 850 1.10e-138 439
Msa0259970 AT4G25880.3 57.738 336 136 1 698 1033 515 844 1.83e-132 422
Msa0259970 AT4G25880.2 57.738 336 136 1 698 1033 515 844 3.61e-132 421
Msa0259970 AT1G22240.1 31.579 323 210 6 712 1030 195 510 1.31e-48 182
Msa0259970 AT1G78160.1 31.366 322 210 6 713 1030 331 645 8.22e-47 179
Msa0259970 AT1G78160.2 31.366 322 210 6 713 1030 333 647 8.67e-47 179
Msa0259970 AT5G56510.4 30.218 321 215 4 713 1029 275 590 8.08e-45 172
Msa0259970 AT5G56510.6 30.218 321 215 4 713 1029 275 590 8.08e-45 172
Msa0259970 AT5G56510.2 30.218 321 215 4 713 1029 275 590 8.08e-45 172
Msa0259970 AT5G56510.1 30.218 321 215 4 713 1029 275 590 8.08e-45 172
Msa0259970 AT5G56510.3 30.218 321 215 4 713 1029 275 590 8.08e-45 172
Msa0259970 AT5G56510.5 31.142 289 190 4 713 997 275 558 6.11e-41 160
Msa0259970 AT4G08840.1 31.546 317 204 7 718 1030 244 551 8.29e-41 159
Msa0259970 AT4G08840.1 26.957 230 149 7 713 933 314 533 3.20e-17 87.0
Msa0259970 AT4G08840.1 24.057 212 152 3 789 997 243 448 2.37e-14 77.8
Msa0259970 AT1G35730.2 29.141 326 215 7 713 1030 253 570 1.17e-37 150
Msa0259970 AT1G35730.1 29.141 326 215 7 713 1030 247 564 1.37e-37 150
Msa0259970 AT1G35750.1 30.581 327 204 10 713 1030 211 523 1.72e-35 143
Msa0259970 AT5G43090.1 20.186 322 242 4 718 1031 211 525 8.65e-19 91.7
Msa0259970 AT5G43110.1 19.335 331 247 7 711 1031 196 516 1.76e-14 78.2
Msa0259970 AT5G59280.1 21.327 211 162 2 791 1001 86 292 5.11e-12 68.9
Msa0259970 AT1G35850.2 22.047 254 187 6 791 1042 11 255 1.98e-11 66.2
Msa0259970 AT1G35850.1 24.176 273 180 10 789 1042 38 302 3.06e-11 66.2

Find 342 sgRNAs with CRISPR-Local

Find 487 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGCTTTCTGAAATTTC+TGG 0.119870 2_2:+57449637 Msa0259970:CDS
GAAATTGAGGTGATAAATTA+TGG 0.158745 2_2:-57446728 None:intergenic
GAGTTAGCCAACAAGCTTTA+TGG 0.162586 2_2:+57450026 Msa0259970:CDS
CAATTTCATATCAGCAATTA+TGG 0.185841 2_2:+57446778 Msa0259970:five_prime_UTR
TCCAACCATCATGGTTATTA+TGG 0.193767 2_2:+57449376 Msa0259970:CDS
GATGAATTTGAAAAGGAAAT+AGG 0.195311 2_2:+57447148 Msa0259970:CDS
AAGCCTGTGGACCAGCATTT+TGG 0.205400 2_2:-57448322 None:intergenic
CTGGTCATGTTGTTGAATTC+AGG 0.227637 2_2:+57449656 Msa0259970:CDS
TTACTAGAAGAACCCCTATT+AGG 0.230784 2_2:-57446607 None:intergenic
AAATAGACCAAAACCCTAAT+AGG 0.233088 2_2:+57446593 Msa0259970:five_prime_UTR
GAGTTTGCCATTGGACTTCC+TGG 0.240216 2_2:-57449430 None:intergenic
GCCACTGATGGTTTGAGATT+TGG 0.253931 2_2:+57448272 Msa0259970:CDS
GGAGATAGGAGGAAGGTTAA+TGG 0.256678 2_2:+57447511 Msa0259970:CDS
AAGAACCCCTATTAGGGTTT+TGG 0.260809 2_2:-57446600 None:intergenic
CCACTTCTCTTACCTGAATC+AGG 0.267516 2_2:-57448728 None:intergenic
TGTTGGCTAACTCTCTTCTC+TGG 0.270844 2_2:-57450016 None:intergenic
CAAATATAAGCTTGTAGAAT+TGG 0.275277 2_2:-57452645 None:intergenic
AATTCACCATTTAATAACTA+TGG 0.283508 2_2:+57448908 Msa0259970:CDS
CCGATTGGTAATAAAATTAT+CGG 0.288684 2_2:+57452341 Msa0259970:three_prime_UTR
CTCAGGCCATAGTTATTAAA+TGG 0.313207 2_2:-57448914 None:intergenic
AAACCACCTCCACCACTATA+AGG 0.316731 2_2:-57448854 None:intergenic
GAGATTTGGATCAAATGTTC+AGG 0.317740 2_2:+57448286 Msa0259970:CDS
AGAAAAGAATATGGTTTATC+AGG 0.319439 2_2:+57449831 Msa0259970:CDS
CAGGAGTAGTGCTTCGTGAT+AGG 0.325311 2_2:-57448379 None:intergenic
AGTGCAGTTGGAGGGTTGTT+TGG 0.328365 2_2:+57447274 Msa0259970:CDS
CTTGGAGGTGGTTTGCCCTC+TGG 0.330027 2_2:+57449070 Msa0259970:CDS
TTCAGAATCAATCATCAAAA+AGG 0.332683 2_2:-57446832 None:intergenic
TACTAGAAGAACCCCTATTA+GGG 0.334435 2_2:-57446606 None:intergenic
CCCAACAACTTGTATTTCAA+TGG 0.337549 2_2:+57448818 Msa0259970:CDS
ATTGGCAGTGCTGATCAATA+TGG 0.338609 2_2:+57449766 Msa0259970:intron
GTTGATGAAAGCGATGAAAT+TGG 0.339624 2_2:-57446647 None:intergenic
AAAACAGCTCACCCTGATTC+AGG 0.339900 2_2:+57448716 Msa0259970:CDS
AAATATAAGCTTGTAGAATT+GGG 0.341180 2_2:-57452644 None:intergenic
AATAGACCAAAACCCTAATA+GGG 0.341479 2_2:+57446594 Msa0259970:five_prime_UTR
GCTTCTGCAATTGGTGGAAT+TGG 0.342634 2_2:+57447490 Msa0259970:CDS
AGAATTCTTGAGTCCATTCC+AGG 0.343201 2_2:-57449049 None:intergenic
TCTGGACCAGAAGATTAAAA+TGG 0.343695 2_2:+57450215 Msa0259970:CDS
GGATGAAAATGAGCCTCTTC+AGG 0.344030 2_2:+57451389 Msa0259970:CDS
TCTGCTGAGTGGGGTGGCGA+TGG 0.344605 2_2:+57447634 Msa0259970:CDS
TTGGATCTGGCAGTCCTATT+AGG 0.345867 2_2:+57449470 Msa0259970:CDS
CAGAAGCAAAATGCATATTC+AGG 0.354543 2_2:-57449501 None:intergenic
GGAATGGACTCAAGAATTCT+TGG 0.354552 2_2:+57449052 Msa0259970:CDS
TTCAGGTCATTGTGCCTAAT+AGG 0.357554 2_2:-57449484 None:intergenic
AATAGGTGTGGGGCAAGGAC+TGG 0.362763 2_2:-57448426 None:intergenic
AACCACTGAAGAAAAGAATA+TGG 0.364988 2_2:+57449822 Msa0259970:CDS
CAGTCTCCTCATACTACTTA+GGG 0.365149 2_2:+57452199 Msa0259970:CDS
GATGTCTCATCTGGCATCAA+TGG 0.365297 2_2:+57448497 Msa0259970:CDS
GGCCATAGAAGTTGTTGATC+TGG 0.369059 2_2:+57450197 Msa0259970:intron
TCCTGCTGTGGCATCCTTCA+TGG 0.369127 2_2:+57448955 Msa0259970:CDS
TTTAGGTTATTTAACGGTTG+AGG 0.370741 2_2:+57447012 Msa0259970:five_prime_UTR
GTTTCAGCTCGTAGCGTTGA+TGG 0.370839 2_2:+57446864 Msa0259970:five_prime_UTR
CTGCTGAGTGGGGTGGCGAT+GGG 0.374192 2_2:+57447635 Msa0259970:CDS
ACACTTCTCCACAACATTAG+AGG 0.374528 2_2:-57451307 None:intergenic
CTCAGAACCAAAACCATTCC+CGG 0.376480 2_2:-57447341 None:intergenic
GTCCAGATCAACAACTTCTA+TGG 0.380935 2_2:-57450199 None:intergenic
ATGAATTTGAAAAGGAAATA+GGG 0.381115 2_2:+57447149 Msa0259970:CDS
GGTTTGCCAGGACTAGGTCT+TGG 0.383859 2_2:+57447664 Msa0259970:CDS
CAACCCATCCATATGGTTGC+CGG 0.384834 2_2:+57450379 Msa0259970:CDS
GTTTGCCAGGACTAGGTCTT+GGG 0.388587 2_2:+57447665 Msa0259970:CDS
CTGGCAACGTGTTGTGGATC+AGG 0.389618 2_2:-57448398 None:intergenic
CTGATCCACAACACGTTGCC+AGG 0.395126 2_2:+57448399 Msa0259970:CDS
GGTGGTAATGAGGGTTCGTT+TGG 0.397361 2_2:+57447124 Msa0259970:CDS
TCCACTTCTCCAGTTGGATC+TGG 0.397655 2_2:+57449457 Msa0259970:CDS
ATAAAATCAATTGCATCTTC+AGG 0.398406 2_2:-57450321 None:intergenic
TGGGGTGGCGATGGGCTCAT+TGG 0.401101 2_2:+57447643 Msa0259970:CDS
CTCGACAACCATACATTTGA+AGG 0.401988 2_2:-57450067 None:intergenic
GTGGAGAAGTGTTTGACCTT+TGG 0.406252 2_2:+57451318 Msa0259970:CDS
CTGTGTCTATGTTTATTAGT+AGG 0.411848 2_2:+57452577 Msa0259970:three_prime_UTR
GAGCTTCAGAAAGCATATCT+TGG 0.413464 2_2:+57449292 Msa0259970:CDS
CTCATTGGTTTGCCAGGACT+AGG 0.414551 2_2:+57447658 Msa0259970:CDS
GTTCCATTGGGTGGTAAATC+CGG 0.416423 2_2:+57449349 Msa0259970:CDS
AGTCCTTGCCCCACACCTAT+TGG 0.416627 2_2:+57448428 Msa0259970:CDS
AACCACCTCCACCACTATAA+GGG 0.417360 2_2:-57448853 None:intergenic
TAGCAAAGGAGGAGGAAGTC+TGG 0.420172 2_2:-57447425 None:intergenic
GCTTTGATGACCGATGTCTT+TGG 0.420200 2_2:+57449874 Msa0259970:CDS
GCAGTTGGAGGGTTGTTTGG+AGG 0.421442 2_2:+57447277 Msa0259970:CDS
TTTCAGCTCGTAGCGTTGAT+GGG 0.421502 2_2:+57446865 Msa0259970:five_prime_UTR
AGAATGGGAAATCAAATTGC+AGG 0.421672 2_2:+57449127 Msa0259970:CDS
ATTTGCATGGCAGAGAGTAC+TGG 0.426764 2_2:+57450480 Msa0259970:intron
GGCCTGAGTGGTGGGTATGC+TGG 0.429121 2_2:+57448929 Msa0259970:CDS
GCGGTGTTTGCTACACCTCC+GGG 0.431004 2_2:+57447556 Msa0259970:CDS
ACACTTAGCCTTCAAATGTA+TGG 0.431661 2_2:+57450059 Msa0259970:CDS
TGTTGTCTGATATGGGTAGA+AGG 0.432671 2_2:+57447089 Msa0259970:CDS
TCAGTCTCCTCATACTACTT+AGG 0.432743 2_2:+57452198 Msa0259970:CDS
ACTCAACTTGTGATGGGAAA+TGG 0.432894 2_2:-57448589 None:intergenic
TATTTAAAGAAGGCTGAATC+AGG 0.433743 2_2:+57448683 Msa0259970:CDS
CTCCTATACAAATTAAGTTC+AGG 0.435558 2_2:-57447217 None:intergenic
GGGGCAAGGACTGGGAGCCC+TGG 0.435922 2_2:-57448417 None:intergenic
CATAGTTGCCATACTGATCC+TGG 0.435987 2_2:-57450573 None:intergenic
AATTGGCGGCGATTGGTTGC+TGG 0.437823 2_2:-57446630 None:intergenic
TATTCTTATGCTGCTGCACT+TGG 0.438248 2_2:+57448347 Msa0259970:CDS
TGTATCACCCGGCAACCATA+TGG 0.439118 2_2:-57450387 None:intergenic
AAAGGCGGAGCTTCTGCAAT+TGG 0.441477 2_2:+57447481 Msa0259970:CDS
ACCAGTCCTGATGTCTCATC+TGG 0.444008 2_2:+57448488 Msa0259970:CDS
AGCGGTGTTTGCTACACCTC+CGG 0.444772 2_2:+57447555 Msa0259970:CDS
TCCATTGAAATACAAGTTGT+TGG 0.445718 2_2:-57448819 None:intergenic
ATATGGTTGCCGGGTGATAC+AGG 0.446850 2_2:+57450389 Msa0259970:CDS
ATAGGTGTGGGGCAAGGACT+GGG 0.447203 2_2:-57448425 None:intergenic
CACCTCCGGGGTTTAACAAT+AGG 0.447693 2_2:+57447569 Msa0259970:CDS
CTTTGCTATCAAAGGAGGAT+TGG 0.447733 2_2:+57447440 Msa0259970:CDS
TCTTATGCTGCTGCACTTGG+TGG 0.450757 2_2:+57448350 Msa0259970:CDS
TCAACAGATGACGTGCTAGA+AGG 0.450839 2_2:+57448560 Msa0259970:CDS
ATGTCTCATCTGGCATCAAT+GGG 0.451430 2_2:+57448498 Msa0259970:CDS
GTTGGCTAACTCTCTTCTCT+GGG 0.452754 2_2:-57450015 None:intergenic
ATCTGTAGACAGGAATTACT+TGG 0.453537 2_2:+57449246 Msa0259970:CDS
TCACCTGGCTCCCCTTATAG+TGG 0.453570 2_2:+57448842 Msa0259970:CDS
TCCAAGTTGGTTAGCCATGA+AGG 0.455908 2_2:-57448969 None:intergenic
ATGGCTAACCAACTTGGAAC+TGG 0.455921 2_2:+57448974 Msa0259970:CDS
GCGATGAAATTGGCGGCGAT+TGG 0.456046 2_2:-57446637 None:intergenic
ATAGGACTGCCAGATCCAAC+TGG 0.456552 2_2:-57449466 None:intergenic
TTAGGTTATTTAACGGTTGA+GGG 0.459739 2_2:+57447013 Msa0259970:five_prime_UTR
GAGAAGTGTTTGACCTTTGG+AGG 0.460349 2_2:+57451321 Msa0259970:CDS
TGCTATCAAAGGAGGATTGG+AGG 0.460502 2_2:+57447443 Msa0259970:CDS
AAATTGAGGTGATAAATTAT+GGG 0.460598 2_2:-57446727 None:intergenic
TCTTTATCCACTTCTCCAGT+TGG 0.460661 2_2:+57449451 Msa0259970:CDS
TGCCCCACACCTATTGGTAG+TGG 0.460898 2_2:+57448434 Msa0259970:CDS
ACCATGATGGTTGGAACCAC+CGG 0.461246 2_2:-57449368 None:intergenic
TCCTTCATGGCTAACCAACT+TGG 0.462350 2_2:+57448968 Msa0259970:CDS
GTTGGAGGGTTGTTTGGAGG+TGG 0.463395 2_2:+57447280 Msa0259970:CDS
ACAACTCTCCCACTACCAAT+AGG 0.464142 2_2:-57448443 None:intergenic
GGTGTTGGTTTGTCTTATCC+AGG 0.464786 2_2:+57449412 Msa0259970:CDS
GTCACAATACAATGTTCCAT+TGG 0.466232 2_2:+57449336 Msa0259970:CDS
ATCCTCTGCAGAAGCAGAGC+TGG 0.467908 2_2:+57448226 Msa0259970:CDS
TTGGTTCTGAGGAAGAGCTT+AGG 0.467990 2_2:+57447353 Msa0259970:CDS
AACTAGAGGTTCTGCTGAGT+GGG 0.469464 2_2:+57447624 Msa0259970:CDS
GATATTGCATCTGCATTGTC+TGG 0.470238 2_2:+57448527 Msa0259970:CDS
GTTTGGAGATGAATTTGAAA+AGG 0.470900 2_2:+57447141 Msa0259970:CDS
GATGGGCTCATTGGTTTGCC+AGG 0.472047 2_2:+57447652 Msa0259970:CDS
TGTAGTGATGGGTAGTGATC+AGG 0.472235 2_2:+57447041 Msa0259970:five_prime_UTR
AACCTGAACTTAATTTGTAT+AGG 0.474825 2_2:+57447215 Msa0259970:CDS
CATCTACGTTTCCAGCATCT+AGG 0.476061 2_2:-57449561 None:intergenic
TTCCCAAAATGCTGGTCCAC+AGG 0.476686 2_2:+57448319 Msa0259970:CDS
CCATTGAAATACAAGTTGTT+GGG 0.477564 2_2:-57448818 None:intergenic
TCCTCCTCCTTTGCTATCAA+AGG 0.479514 2_2:+57447432 Msa0259970:CDS
CAATTGGTGGAATTGGAGAT+AGG 0.481550 2_2:+57447497 Msa0259970:CDS
AGTGATTGGTGGTGGTAATG+AGG 0.481583 2_2:+57447114 Msa0259970:CDS
TCCATAATAACCATGATGGT+TGG 0.484051 2_2:-57449377 None:intergenic
GCATCTCATTTACAAGCAAT+AGG 0.484300 2_2:-57451356 None:intergenic
TCCCCTTATAGTGGTGGAGG+TGG 0.486724 2_2:+57448851 Msa0259970:CDS
GCACCATGGCACCTAGATGC+TGG 0.486752 2_2:+57449550 Msa0259970:CDS
AAAATGGTTCAAGAGCTTGA+TGG 0.487490 2_2:+57450231 Msa0259970:CDS
GGCTCCCCTTATAGTGGTGG+AGG 0.487949 2_2:+57448848 Msa0259970:CDS
AACATGGCCATAAAGCTTGT+TGG 0.488641 2_2:-57450033 None:intergenic
GACTCAAGAATTCTTGGAGG+TGG 0.489951 2_2:+57449058 Msa0259970:CDS
TTCATCAAATGCGTTACGAC+TGG 0.490413 2_2:-57448189 None:intergenic
AGCTATGGCGTCCCCTGGAA+TGG 0.495376 2_2:+57449036 Msa0259970:CDS
AACGAACCCTCCACAGTTGG+AGG 0.496406 2_2:-57447250 None:intergenic
GCATCAGCTATGGCGTCCCC+TGG 0.501319 2_2:+57449031 Msa0259970:CDS
ACACTATCAACCCATCCATA+TGG 0.502240 2_2:+57450372 Msa0259970:CDS
TTGCTTGTAAATGAGATGCT+TGG 0.503439 2_2:+57451360 Msa0259970:CDS
TTGAGGGTTAAGTGTAGTGA+TGG 0.504750 2_2:+57447029 Msa0259970:five_prime_UTR
TGCTAATTATGTTGTACAGA+AGG 0.505438 2_2:+57451876 Msa0259970:CDS
AAGTTGTGCAGCAGCATACT+CGG 0.508196 2_2:-57449206 None:intergenic
GTGGATAAAGAGTTTGCCAT+TGG 0.508321 2_2:-57449439 None:intergenic
CGATGTCTTTGGTAATTATG+TGG 0.509063 2_2:+57449885 Msa0259970:CDS
TTGGCAGTGCTGATCAATAT+GGG 0.509849 2_2:+57449767 Msa0259970:intron
ATGTTGGCCCAGGATCAGTA+TGG 0.510536 2_2:+57450565 Msa0259970:CDS
TCAAATGCGTTACGACTGGC+TGG 0.512314 2_2:-57448185 None:intergenic
AACCCATCCATATGGTTGCC+GGG 0.512730 2_2:+57450380 Msa0259970:CDS
AAGTCCATCCTTGGATAGGC+AGG 0.513157 2_2:+57448769 Msa0259970:CDS
GATTTCCATAATAACCATGA+TGG 0.514134 2_2:-57449381 None:intergenic
AGGAGTAGTGCTTCGTGATA+GGG 0.514242 2_2:-57448378 None:intergenic
GCCCTCCCCTAAGTAGTATG+AGG 0.514678 2_2:-57452205 None:intergenic
TTATGTTGTACAGAAGGTGC+TGG 0.516780 2_2:+57451882 Msa0259970:CDS
GGAGCCCTGGCAACGTGTTG+TGG 0.516893 2_2:-57448404 None:intergenic
CGTTGCTGCAGCATCAGCTA+TGG 0.516905 2_2:+57449021 Msa0259970:CDS
AGCAAAGGAGGAGGAAGTCT+GGG 0.518907 2_2:-57447424 None:intergenic
GAGGTTCAGATGTGTGATTA+TGG 0.519278 2_2:+57452418 Msa0259970:three_prime_UTR
TCACAATACAATGTTCCATT+GGG 0.519367 2_2:+57449337 Msa0259970:CDS
CTATTTATCTCTGTCTGTGA+TGG 0.520233 2_2:+57452311 Msa0259970:three_prime_UTR
GGCGGAGCTTCTGCAATTGG+TGG 0.520880 2_2:+57447484 Msa0259970:CDS
AGATACATCGGATCAACATA+AGG 0.522156 2_2:-57449166 None:intergenic
AGCAGTTAGCATGTTGGCCC+AGG 0.522432 2_2:+57450555 Msa0259970:CDS
AAATGAAGAGAGTGATGAAA+AGG 0.523282 2_2:-57446704 None:intergenic
GTTGTTTGGAGGTGGTTCTA+CGG 0.523386 2_2:+57447288 Msa0259970:CDS
CTGGAATGAGGAATGTAGCT+GGG 0.523898 2_2:+57449521 Msa0259970:CDS
ATGCAAGGTGGTCAGGATCA+TGG 0.523936 2_2:+57448647 Msa0259970:CDS
ACAATCATCAAGGAATTAGC+AGG 0.524000 2_2:+57451252 Msa0259970:CDS
AGACATGAGAAGTCCATCCT+TGG 0.524846 2_2:+57448760 Msa0259970:CDS
TAAACATAACTCTTTGATGC+AGG 0.525614 2_2:-57452283 None:intergenic
CATTAGAGGCAAACTTCTGC+TGG 0.527514 2_2:-57451293 None:intergenic
ACATCAGACTCAACTTGTGA+TGG 0.528233 2_2:-57448596 None:intergenic
AGATTTGGATCAAATGTTCA+GGG 0.528775 2_2:+57448287 Msa0259970:CDS
GGAAATCCTGCATATGGTGT+TGG 0.529957 2_2:+57449397 Msa0259970:CDS
TCACCTGCTTCCCAAAATGC+TGG 0.529993 2_2:+57448311 Msa0259970:CDS
TAACAGCATGTGCTTGAGCA+TGG 0.531524 2_2:+57451210 Msa0259970:intron
ATCAGCTCCTCCAACTGTGG+AGG 0.531581 2_2:+57447243 Msa0259970:CDS
GTGCATGTTCTCAGTAGAAT+GGG 0.532346 2_2:+57449112 Msa0259970:CDS
GCCATGAAGGATGCCACAGC+AGG 0.534596 2_2:-57448956 None:intergenic
TCATTACCACCACCAATCAC+TGG 0.534723 2_2:-57447112 None:intergenic
AAGTAATTCCTGTCTACAGA+TGG 0.536090 2_2:-57449244 None:intergenic
GAGGAATGTAGCTGGGGTCA+TGG 0.537425 2_2:+57449528 Msa0259970:CDS
CATGACTCCTCAGCCACTGA+TGG 0.537467 2_2:+57448260 Msa0259970:CDS
GAGGGTTCGTTGAGTGCAGT+TGG 0.537596 2_2:+57447262 Msa0259970:CDS
TGGTAATTATGTGGTTCAGA+AGG 0.538547 2_2:+57449894 Msa0259970:CDS
GCCAGATCCAACTGGAGAAG+TGG 0.539436 2_2:-57449458 None:intergenic
GGTTCGTTGAGTGCAGTTGG+AGG 0.539621 2_2:+57447265 Msa0259970:CDS
TATTATGGAAATCCTGCATA+TGG 0.539931 2_2:+57449391 Msa0259970:CDS
TCAGCTCCTCCAACTGTGGA+GGG 0.541998 2_2:+57447244 Msa0259970:CDS
TCACCCGGCAACCATATGGA+TGG 0.544504 2_2:-57450383 None:intergenic
AATGAAGAGAGTGATGAAAA+GGG 0.544553 2_2:-57446703 None:intergenic
GACAAACCAACACCATATGC+AGG 0.544864 2_2:-57449403 None:intergenic
AATAACTATGGCCTGAGTGG+TGG 0.545392 2_2:+57448920 Msa0259970:CDS
TTTGGTCTATTTAGAACAAG+AGG 0.545574 2_2:-57446582 None:intergenic
TGGATCAGCTCCTCCAACTG+TGG 0.546148 2_2:+57447240 Msa0259970:CDS
CTCAACGAACCCTCCACAGT+TGG 0.546176 2_2:-57447253 None:intergenic
ATAAAATGACCATACAATCA+AGG 0.547474 2_2:+57452468 Msa0259970:three_prime_UTR
GAACTTAATTTGTATAGGAG+TGG 0.547786 2_2:+57447220 Msa0259970:CDS
TCCTCCTTTGCTATCAAAGG+AGG 0.548140 2_2:+57447435 Msa0259970:CDS
GTAGAGAAACTTGTTGCTGC+CGG 0.549361 2_2:+57452006 Msa0259970:CDS
AATTAGAACCATCTGAAGGC+TGG 0.549671 2_2:-57448889 None:intergenic
TTGTATTTCAATGGATCACC+TGG 0.550910 2_2:+57448827 Msa0259970:CDS
AAAGAATTAGTTCACGCTGT+TGG 0.551100 2_2:-57451918 None:intergenic
TCTGAAGGCTGGTATTGTGC+AGG 0.551183 2_2:-57448878 None:intergenic
CACTTCTCTTACCTGAATCA+GGG 0.551927 2_2:-57448727 None:intergenic
CATCAGTGGCTGAGGAGTCA+TGG 0.552200 2_2:-57448259 None:intergenic
TCCGGTGGTTCCAACCATCA+TGG 0.552410 2_2:+57449367 Msa0259970:CDS
TTGATGCCAGATGAGACATC+AGG 0.553190 2_2:-57448494 None:intergenic
AACAGCATGTGCTTGAGCAT+GGG 0.553226 2_2:+57451211 Msa0259970:intron
GCATATTACCAGTTCCAAGT+TGG 0.553748 2_2:-57448982 None:intergenic
GGATGTTGCTTCGCGATCAA+CGG 0.556585 2_2:+57447170 Msa0259970:CDS
CCTGGCTCCCCTTATAGTGG+TGG 0.559535 2_2:+57448845 Msa0259970:CDS
TTAACGACCCATCTGTAGAC+AGG 0.559842 2_2:+57449236 Msa0259970:CDS
GTTCGTTGAGTGCAGTTGGA+GGG 0.560309 2_2:+57447266 Msa0259970:CDS
GTCTTAAAAGAACGAAATTG+AGG 0.561210 2_2:-57446741 None:intergenic
TCTCAAACCATCAGTGGCTG+AGG 0.561369 2_2:-57448267 None:intergenic
GTGATTGGTGGTGGTAATGA+GGG 0.561511 2_2:+57447115 Msa0259970:CDS
CTCCCACTACCAATAGGTGT+GGG 0.562683 2_2:-57448437 None:intergenic
AAATGAGATGCTTGGAACTA+CGG 0.563713 2_2:+57451368 Msa0259970:CDS
CTGAGAACATGCACATCAGA+TGG 0.563732 2_2:-57449103 None:intergenic
ATAACTATGGCCTGAGTGGT+GGG 0.564056 2_2:+57448921 Msa0259970:CDS
GGACATAACACCTCTGTCAC+AGG 0.565032 2_2:+57448149 Msa0259970:CDS
GTGCTGATCAATATGGGAGC+CGG 0.565045 2_2:+57449773 Msa0259970:intron
TTTAGGAGCAGTTAGCATGT+TGG 0.565823 2_2:+57450549 Msa0259970:CDS
TCTGGAATGAGGAATGTAGC+TGG 0.565866 2_2:+57449520 Msa0259970:CDS
GAAAAGAGAGACTGAGGCGG+TGG 0.566351 2_2:+57447591 Msa0259970:CDS
CCACCACTATAAGGGGAGCC+AGG 0.569309 2_2:-57448845 None:intergenic
GTATGGCAACTATGTCGTCC+AGG 0.569382 2_2:+57450582 Msa0259970:CDS
TGTGCATGTTCTCAGTAGAA+TGG 0.570940 2_2:+57449111 Msa0259970:CDS
CAATCCTCCTTTGATAGCAA+AGG 0.571405 2_2:-57447439 None:intergenic
TGAGAAGTCCATCCTTGGAT+AGG 0.574938 2_2:+57448765 Msa0259970:CDS
TCCTTTGATAGCAAAGGAGG+AGG 0.575676 2_2:-57447433 None:intergenic
AATATAAGCTTGTAGAATTG+GGG 0.577633 2_2:-57452643 None:intergenic
ACAAGCAATAGGCGTTCAGA+AGG 0.579596 2_2:-57451345 None:intergenic
TCCTCATACTACTTAGGGGA+GGG 0.579765 2_2:+57452204 Msa0259970:exon
CAATACACTTCTGAATGACA+TGG 0.580271 2_2:-57450290 None:intergenic
GGTAGAAGGCCAGTGATTGG+TGG 0.580326 2_2:+57447103 Msa0259970:CDS
CACCCGGCAACCATATGGAT+GGG 0.580941 2_2:-57450382 None:intergenic
AGAAGGCCAGTGATTGGTGG+TGG 0.581232 2_2:+57447106 Msa0259970:CDS
TCGCGATCAACGGCGTCATG+AGG 0.581350 2_2:+57447180 Msa0259970:CDS
TTCAGCTCGTAGCGTTGATG+GGG 0.581724 2_2:+57446866 Msa0259970:five_prime_UTR
ATGGGTAGAAGGCCAGTGAT+TGG 0.582847 2_2:+57447100 Msa0259970:CDS
GCAGCACGCATATTTAAAGA+AGG 0.585048 2_2:+57448673 Msa0259970:CDS
AGTGATTGTGCAGGATGACA+TGG 0.586726 2_2:+57448127 Msa0259970:intron
CATCAGACTCAACTTGTGAT+GGG 0.588044 2_2:-57448595 None:intergenic
AGCCAGCTCTGCTTCTGCAG+AGG 0.588814 2_2:-57448228 None:intergenic
TTAGTCCCAAGACCTAGTCC+TGG 0.589038 2_2:-57447670 None:intergenic
GTTAATGGAGCTGATGAGAA+TGG 0.589456 2_2:+57447526 Msa0259970:CDS
CCTGATTCAGGTAAGAGAAG+TGG 0.589484 2_2:+57448728 Msa0259970:CDS
TGATCCACAACACGTTGCCA+GGG 0.590112 2_2:+57448400 Msa0259970:CDS
ATGGACTCAAGAATTCTTGG+AGG 0.591427 2_2:+57449055 Msa0259970:CDS
TTACGACTGGCTGGACGAGA+CGG 0.591574 2_2:-57448176 None:intergenic
GATGGAGAAGCAACTCCAGA+GGG 0.593235 2_2:-57449085 None:intergenic
ACCACCTCCACCACTATAAG+GGG 0.593482 2_2:-57448852 None:intergenic
TGGAATTGGAGATAGGAGGA+AGG 0.594744 2_2:+57447504 Msa0259970:CDS
GCCAGATGAGACATCAGGAC+TGG 0.594811 2_2:-57448489 None:intergenic
GTCTTATCCAGGAAGTCCAA+TGG 0.595595 2_2:+57449423 Msa0259970:CDS
CAGGTAAGAGAAGTGGAAGC+GGG 0.596220 2_2:+57448735 Msa0259970:CDS
TCAGGTAAGAGAAGTGGAAG+CGG 0.597387 2_2:+57448734 Msa0259970:CDS
TCTCCCACTACCAATAGGTG+TGG 0.597479 2_2:-57448438 None:intergenic
ATGCTCGACCTGCCTATCCA+AGG 0.598500 2_2:-57448777 None:intergenic
TGAGCGTTCTACAATCATCA+AGG 0.599538 2_2:+57451242 Msa0259970:CDS
CCATTGGGTGGTAAATCCGG+TGG 0.599569 2_2:+57449352 Msa0259970:CDS
AAACTAGAGGTTCTGCTGAG+TGG 0.599602 2_2:+57447623 Msa0259970:CDS
GAATTCTTGAGTCCATTCCA+GGG 0.599791 2_2:-57449048 None:intergenic
TGATGCAGGAGAACAAAGGA+GGG 0.600679 2_2:-57452269 None:intergenic
GCACAATACCAGCCTTCAGA+TGG 0.601016 2_2:+57448881 Msa0259970:CDS
ATAGTTGCCATACTGATCCT+GGG 0.602776 2_2:-57450572 None:intergenic
GAAGTTTGCCTCTAATGTTG+TGG 0.602808 2_2:+57451299 Msa0259970:CDS
TCCTCCTTTGATAGCAAAGG+AGG 0.602969 2_2:-57447436 None:intergenic
TTTCCAGCATCTAGGTGCCA+TGG 0.603193 2_2:-57449553 None:intergenic
AGTTGTGCAGCAGCATACTC+GGG 0.603765 2_2:-57449205 None:intergenic
GCCCCACACCTATTGGTAGT+GGG 0.605163 2_2:+57448435 Msa0259970:CDS
ACACCTCTGATGTCCCTGCA+TGG 0.605486 2_2:+57452442 Msa0259970:three_prime_UTR
GTCATCAAAGCAAGAGCATG+TGG 0.606191 2_2:-57449862 None:intergenic
GAAGGCTAAGTGTCAGAACA+TGG 0.607532 2_2:-57450049 None:intergenic
AGTAATTCCTGTCTACAGAT+GGG 0.607600 2_2:-57449243 None:intergenic
AGACGGAAAGCCTGTGACAG+AGG 0.609185 2_2:-57448159 None:intergenic
GATGAAAGCGATGAAATTGG+CGG 0.610380 2_2:-57446644 None:intergenic
CCACCGGATTTACCACCCAA+TGG 0.610480 2_2:-57449352 None:intergenic
GTTGTTGCTGCTGAGAAGAG+AGG 0.610481 2_2:+57448461 Msa0259970:CDS
CGCTGTGTACGAGATCAGAA+TGG 0.610763 2_2:+57450264 Msa0259970:CDS
TTCCAGCATACCCACCACTC+AGG 0.611254 2_2:-57448931 None:intergenic
CGATGTATCTTCAGTACATG+AGG 0.611331 2_2:+57449179 Msa0259970:CDS
TTGATGCAGGAGAACAAAGG+AGG 0.613025 2_2:-57452270 None:intergenic
GAGAAACTTGTTGCTGCCGG+AGG 0.618103 2_2:+57452009 Msa0259970:CDS
CAATACAATGTTCCATTGGG+TGG 0.619426 2_2:+57449340 Msa0259970:CDS
TTTAATAACTATGGCCTGAG+TGG 0.620041 2_2:+57448917 Msa0259970:CDS
ATAGACCAAAACCCTAATAG+GGG 0.621279 2_2:+57446595 Msa0259970:five_prime_UTR
TAATAATATTGAAGATACGC+AGG 0.625157 2_2:-57447382 None:intergenic
TTGGTGGAATTGGAGATAGG+AGG 0.626161 2_2:+57447500 Msa0259970:CDS
CTCATGTACTGAAGATACAT+CGG 0.626468 2_2:-57449178 None:intergenic
AGAGGTTCTGCTGAGTGGGG+TGG 0.628016 2_2:+57447628 Msa0259970:CDS
CAATAGGAAAAGAGAGACTG+AGG 0.630432 2_2:+57447585 Msa0259970:CDS
GTATGCTGGAAATCCTGCTG+TGG 0.630526 2_2:+57448943 Msa0259970:CDS
TGAGGGTTAAGTGTAGTGAT+GGG 0.631047 2_2:+57447030 Msa0259970:five_prime_UTR
TCCAAATCTCAAACCATCAG+TGG 0.631617 2_2:-57448273 None:intergenic
GCGTTCAGAAGGACCTCCAA+AGG 0.633901 2_2:-57451334 None:intergenic
AAAGGAAAAGAAACCTGAAG+AGG 0.634760 2_2:-57451402 None:intergenic
GGTGAATTAGAACCATCTGA+AGG 0.639525 2_2:-57448893 None:intergenic
CACATAATTACCAAAGACAT+CGG 0.640601 2_2:-57449884 None:intergenic
CTTCCATGCAGGGACATCAG+AGG 0.640701 2_2:-57452445 None:intergenic
ATGATTGTAGAACGCTCATG+AGG 0.641163 2_2:-57451237 None:intergenic
TGGAATGAGGAATGTAGCTG+GGG 0.642831 2_2:+57449522 Msa0259970:CDS
AATGGAGCTGATGAGAATGG+TGG 0.643341 2_2:+57447529 Msa0259970:CDS
CTACCAATAGGTGTGGGGCA+AGG 0.645705 2_2:-57448431 None:intergenic
GCATAAGAATATGAAGCCTG+TGG 0.652845 2_2:-57448335 None:intergenic
TCTGTAGACAGGAATTACTT+GGG 0.655499 2_2:+57449247 Msa0259970:CDS
CGGTGTTTGCTACACCTCCG+GGG 0.655610 2_2:+57447557 Msa0259970:CDS
CTCCTCATACTACTTAGGGG+AGG 0.656672 2_2:+57452203 Msa0259970:exon
TCGACCTGCCTATCCAAGGA+TGG 0.658687 2_2:-57448773 None:intergenic
AGCGACAATATGTTTCCCAT+AGG 0.660900 2_2:-57451980 None:intergenic
TAGCTGGGGTCATGGCACCA+TGG 0.661015 2_2:+57449536 Msa0259970:CDS
TTCCTATTGTTAAACCCCGG+AGG 0.662875 2_2:-57447571 None:intergenic
ACTAGAGGTTCTGCTGAGTG+GGG 0.663357 2_2:+57447625 Msa0259970:CDS
AATTCTTGAGTCCATTCCAG+GGG 0.665267 2_2:-57449047 None:intergenic
CTGTACAAAATGTTGCTATG+TGG 0.666597 2_2:+57452550 Msa0259970:three_prime_UTR
GTGGCTGATGAGAAAACTAG+AGG 0.667175 2_2:+57447610 Msa0259970:CDS
TCCCACTACCAATAGGTGTG+GGG 0.673011 2_2:-57448436 None:intergenic
GATGCAGGAGAACAAAGGAG+GGG 0.674550 2_2:-57452268 None:intergenic
ATGGGAAATCAAATTGCAGG+TGG 0.674760 2_2:+57449130 Msa0259970:CDS
AGATGGAGAAGCAACTCCAG+AGG 0.676390 2_2:-57449086 None:intergenic
TGTGATGGATAGTAGCCGAT+TGG 0.681445 2_2:+57452326 Msa0259970:three_prime_UTR
TCTTTGATGCAGGAGAACAA+AGG 0.691435 2_2:-57452273 None:intergenic
ACATCTTTACCTGTATCACC+CGG 0.691610 2_2:-57450398 None:intergenic
GTTGTCTGTACAGCTAACTG+AGG 0.697737 2_2:+57452235 Msa0259970:three_prime_UTR
TGATGAGAATGGTGGAAGAG+CGG 0.704265 2_2:+57447537 Msa0259970:CDS
TGGTTGTCGAGTCATCCAGA+AGG 0.705947 2_2:+57450079 Msa0259970:CDS
ACATTGTATTGTGACTTCTG+AGG 0.707222 2_2:-57449328 None:intergenic
GTGATTGTGCAGGATGACAT+GGG 0.717630 2_2:+57448128 Msa0259970:intron
AGTCTCCTCATACTACTTAG+GGG 0.720809 2_2:+57452200 Msa0259970:CDS
TAGGAAAAGAGAGACTGAGG+CGG 0.753953 2_2:+57447588 Msa0259970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATATAATTTTCTCTTAT+TGG + chr2_2:57449748-57449767 Msa0259970:intron 10.0%
!!! TTTTTTATTTCTATATCTTT+AGG + chr2_2:57450176-57450195 Msa0259970:intron 10.0%
!!! GATATGATTAATTTTTGTTA+AGG + chr2_2:57446919-57446938 Msa0259970:five_prime_UTR 15.0%
!! CTGAATAAATTTAATTGATT+TGG + chr2_2:57447870-57447889 Msa0259970:intron 15.0%
!!! AATTATCAAAGATATCTTTT+TGG + chr2_2:57448623-57448642 Msa0259970:CDS 15.0%
!! AAGATCTATATATTTATGAA+TGG - chr2_2:57449946-57449965 None:intergenic 15.0%
!! AAACTAATCATTTAATATTG+TGG - chr2_2:57450927-57450946 None:intergenic 15.0%
!!! AGTTTTTAGATTTTGTTTTA+TGG + chr2_2:57450942-57450961 Msa0259970:intron 15.0%
!!! GTTTTTAGATTTTGTTTTAT+GGG + chr2_2:57450943-57450962 Msa0259970:intron 15.0%
!! AAATTATTAACAGCTATTAA+AGG - chr2_2:57451423-57451442 None:intergenic 15.0%
!! AAATTGAGGTGATAAATTAT+GGG - chr2_2:57446730-57446749 None:intergenic 20.0%
!! AAAAAAAATGTTGTCTGATA+TGG + chr2_2:57447081-57447100 Msa0259970:exon 20.0%
!! AAAAAAATGTTGTCTGATAT+GGG + chr2_2:57447082-57447101 Msa0259970:exon 20.0%
!! ATGAATTTGAAAAGGAAATA+GGG + chr2_2:57447149-57447168 Msa0259970:CDS 20.0%
!!! AAATTTATTCAGTTTGTTAG+TGG - chr2_2:57447862-57447881 None:intergenic 20.0%
!!! TTCCTAAAAATCCTATATTT+TGG + chr2_2:57447919-57447938 Msa0259970:intron 20.0%
!! AATTCACCATTTAATAACTA+TGG + chr2_2:57448908-57448927 Msa0259970:CDS 20.0%
!! GTTATGAATTATTATAAACC+TGG - chr2_2:57450603-57450622 None:intergenic 20.0%
!! AGTAAATATGACACAATAAA+AGG - chr2_2:57451148-57451167 None:intergenic 20.0%
!!! AACATATTATTTTAAGTCCT+CGG - chr2_2:57451562-57451581 None:intergenic 20.0%
!!! GCGATTTTTTTTTTTTTTGA+AGG - chr2_2:57451731-57451750 None:intergenic 20.0%
!!! TTATACATAGATTTTAAGAG+AGG + chr2_2:57452394-57452413 Msa0259970:three_prime_UTR 20.0%
!! GTTGTAAAGTTTCATAAAAA+CGG + chr2_2:57452502-57452521 Msa0259970:three_prime_UTR 20.0%
!! AAATATAAGCTTGTAGAATT+GGG - chr2_2:57452647-57452666 None:intergenic 20.0%
!!! ATGAAAAGGGTGAAATTTTT+TGG - chr2_2:57446693-57446712 None:intergenic 25.0%
! GAAATTGAGGTGATAAATTA+TGG - chr2_2:57446731-57446750 None:intergenic 25.0%
! CAATTTCATATCAGCAATTA+TGG + chr2_2:57446778-57446797 Msa0259970:five_prime_UTR 25.0%
! TTCAGAATCAATCATCAAAA+AGG - chr2_2:57446835-57446854 None:intergenic 25.0%
!!! TGATAAAAGTTTCCGTTTTT+AGG + chr2_2:57446995-57447014 Msa0259970:five_prime_UTR 25.0%
!!! TCCGTTTTTAGGTTATTTAA+CGG + chr2_2:57447006-57447025 Msa0259970:five_prime_UTR 25.0%
! ACCGTTAAATAACCTAAAAA+CGG - chr2_2:57447010-57447029 None:intergenic 25.0%
! GATGAATTTGAAAAGGAAAT+AGG + chr2_2:57447148-57447167 Msa0259970:CDS 25.0%
!!! AACCTGAACTTAATTTGTAT+AGG + chr2_2:57447215-57447234 Msa0259970:CDS 25.0%
! TAATAATATTGAAGATACGC+AGG - chr2_2:57447385-57447404 None:intergenic 25.0%
!! TGCCAAAATATAGGATTTTT+AGG - chr2_2:57447924-57447943 None:intergenic 25.0%
!! TTATGTGCATATGTTGATAA+TGG + chr2_2:57447974-57447993 Msa0259970:intron 25.0%
! AGAAAAGAATATGGTTTATC+AGG + chr2_2:57449831-57449850 Msa0259970:CDS 25.0%
! TTATTACTCTGTCTCTATAT+TGG + chr2_2:57449920-57449939 Msa0259970:intron 25.0%
! ATAAAATCAATTGCATCTTC+AGG - chr2_2:57450324-57450343 None:intergenic 25.0%
!!! TGTAATACGTTTTATTTGCA+TGG + chr2_2:57450467-57450486 Msa0259970:intron 25.0%
!! AAAGTTATGGATGAGATTTT+AGG + chr2_2:57450532-57450551 Msa0259970:CDS 25.0%
!! ACAAAGCATTATGATTGTTA+GGG - chr2_2:57450680-57450699 None:intergenic 25.0%
!! TTGTGAAGTTTTCTTCATTA+TGG + chr2_2:57450696-57450715 Msa0259970:intron 25.0%
! AGTGAAGCAAATCAATAAAA+CGG - chr2_2:57450830-57450849 None:intergenic 25.0%
! TGTTCAAACGTTAAATTACA+TGG - chr2_2:57451676-57451695 None:intergenic 25.0%
! AATTTAACGTTTGAACAGAA+TGG + chr2_2:57451679-57451698 Msa0259970:intron 25.0%
!! AATTTTGTCAAAACATACTG+AGG - chr2_2:57451782-57451801 None:intergenic 25.0%
! AAAATAAGTATAAGTACCTC+CGG - chr2_2:57452028-57452047 None:intergenic 25.0%
!! CCGATAATTTTATTACCAAT+CGG - chr2_2:57452344-57452363 None:intergenic 25.0%
!! CCGATTGGTAATAAAATTAT+CGG + chr2_2:57452341-57452360 Msa0259970:three_prime_UTR 25.0%
! ATAAAATGACCATACAATCA+AGG + chr2_2:57452468-57452487 Msa0259970:three_prime_UTR 25.0%
! AATATAAGCTTGTAGAATTG+GGG - chr2_2:57452646-57452665 None:intergenic 25.0%
! CAAATATAAGCTTGTAGAAT+TGG - chr2_2:57452648-57452667 None:intergenic 25.0%
! TTTGGTCTATTTAGAACAAG+AGG - chr2_2:57446585-57446604 None:intergenic 30.0%
AAATAGACCAAAACCCTAAT+AGG + chr2_2:57446593-57446612 Msa0259970:five_prime_UTR 30.0%
AATAGACCAAAACCCTAATA+GGG + chr2_2:57446594-57446613 Msa0259970:five_prime_UTR 30.0%
AATGAAGAGAGTGATGAAAA+GGG - chr2_2:57446706-57446725 None:intergenic 30.0%
AAATGAAGAGAGTGATGAAA+AGG - chr2_2:57446707-57446726 None:intergenic 30.0%
GTCTTAAAAGAACGAAATTG+AGG - chr2_2:57446744-57446763 None:intergenic 30.0%
! TGCTTTTGATGCTGTAAATA+TGG + chr2_2:57446956-57446975 Msa0259970:five_prime_UTR 30.0%
! GCTTTTGATGCTGTAAATAT+GGG + chr2_2:57446957-57446976 Msa0259970:five_prime_UTR 30.0%
! CTTTTGATGCTGTAAATATG+GGG + chr2_2:57446958-57446977 Msa0259970:five_prime_UTR 30.0%
! TTTAGGTTATTTAACGGTTG+AGG + chr2_2:57447012-57447031 Msa0259970:five_prime_UTR 30.0%
TTAGGTTATTTAACGGTTGA+GGG + chr2_2:57447013-57447032 Msa0259970:five_prime_UTR 30.0%
GTTTGGAGATGAATTTGAAA+AGG + chr2_2:57447141-57447160 Msa0259970:CDS 30.0%
CTCCTATACAAATTAAGTTC+AGG - chr2_2:57447220-57447239 None:intergenic 30.0%
!! GAACTTAATTTGTATAGGAG+TGG + chr2_2:57447220-57447239 Msa0259970:CDS 30.0%
CAAAAGTGACATAAAATCCA+GGG - chr2_2:57447766-57447785 None:intergenic 30.0%
ACAAAAGTGACATAAAATCC+AGG - chr2_2:57447767-57447786 None:intergenic 30.0%
!! TTAATTGATTTGGCTGTGTA+TGG + chr2_2:57447880-57447899 Msa0259970:intron 30.0%
!! TAATTGATTTGGCTGTGTAT+GGG + chr2_2:57447881-57447900 Msa0259970:intron 30.0%
TTACAAGTGTGCCAAAATAT+AGG - chr2_2:57447933-57447952 None:intergenic 30.0%
AGATTTGGATCAAATGTTCA+GGG + chr2_2:57448287-57448306 Msa0259970:CDS 30.0%
!! AGATATCTTTTTGGTATGCA+AGG + chr2_2:57448632-57448651 Msa0259970:CDS 30.0%
TATTTAAAGAAGGCTGAATC+AGG + chr2_2:57448683-57448702 Msa0259970:CDS 30.0%
CCATTGAAATACAAGTTGTT+GGG - chr2_2:57448821-57448840 None:intergenic 30.0%
TCCATTGAAATACAAGTTGT+TGG - chr2_2:57448822-57448841 None:intergenic 30.0%
TCACAATACAATGTTCCATT+GGG + chr2_2:57449337-57449356 Msa0259970:CDS 30.0%
GATTTCCATAATAACCATGA+TGG - chr2_2:57449384-57449403 None:intergenic 30.0%
TATTATGGAAATCCTGCATA+TGG + chr2_2:57449391-57449410 Msa0259970:CDS 30.0%
!! TTTGAGCTTTCTGAAATTTC+TGG + chr2_2:57449637-57449656 Msa0259970:CDS 30.0%
! CAAGCTTTTGTTGAATAAAC+CGG - chr2_2:57449795-57449814 None:intergenic 30.0%
AACCACTGAAGAAAAGAATA+TGG + chr2_2:57449822-57449841 Msa0259970:CDS 30.0%
! AACCATATTCTTTTCTTCAG+TGG - chr2_2:57449827-57449846 None:intergenic 30.0%
CACATAATTACCAAAGACAT+CGG - chr2_2:57449887-57449906 None:intergenic 30.0%
TGAAAATTGACAATACCTTC+TGG - chr2_2:57450097-57450116 None:intergenic 30.0%
!! CTTGAACCATTTTAATCTTC+TGG - chr2_2:57450224-57450243 None:intergenic 30.0%
GATACAGGTAAAGATGTATT+CGG + chr2_2:57450404-57450423 Msa0259970:intron 30.0%
AATAAAACGTATTACAGCCA+AGG - chr2_2:57450463-57450482 None:intergenic 30.0%
!! TAACTTTTTGTTGTGTGTCA+GGG - chr2_2:57450519-57450538 None:intergenic 30.0%
!! ATAACTTTTTGTTGTGTGTC+AGG - chr2_2:57450520-57450539 None:intergenic 30.0%
TGACACACAACAAAAAGTTA+TGG + chr2_2:57450519-57450538 Msa0259970:CDS 30.0%
! CACTTTTAAATCAACAAGTC+TGG - chr2_2:57450654-57450673 None:intergenic 30.0%
!! CAGACTTGTTGATTTAAAAG+TGG + chr2_2:57450652-57450671 Msa0259970:intron 30.0%
! CACAAAGCATTATGATTGTT+AGG - chr2_2:57450681-57450700 None:intergenic 30.0%
TGAAGCAAATCAATAAAACG+GGG - chr2_2:57450828-57450847 None:intergenic 30.0%
GTGAAGCAAATCAATAAAAC+GGG - chr2_2:57450829-57450848 None:intergenic 30.0%
GATGGTGTACATCATAATAA+AGG - chr2_2:57450886-57450905 None:intergenic 30.0%
TGACACAATAAAAGGACAAA+AGG - chr2_2:57451140-57451159 None:intergenic 30.0%
!! TTTTCAAGAGAGATTTCACA+GGG - chr2_2:57451639-57451658 None:intergenic 30.0%
!! ATTTTCAAGAGAGATTTCAC+AGG - chr2_2:57451640-57451659 None:intergenic 30.0%
TGCTAATTATGTTGTACAGA+AGG + chr2_2:57451876-57451895 Msa0259970:CDS 30.0%
! CATTGAAAAAGTACACCTAT+GGG + chr2_2:57451965-57451984 Msa0259970:CDS 30.0%
ATTAATGCATCATGTGTGTT+TGG + chr2_2:57452070-57452089 Msa0259970:intron 30.0%
TAAACATAACTCTTTGATGC+AGG - chr2_2:57452286-57452305 None:intergenic 30.0%
CCTTAAAAACCTTGATTGTA+TGG - chr2_2:57452480-57452499 None:intergenic 30.0%
! CCATACAATCAAGGTTTTTA+AGG + chr2_2:57452477-57452496 Msa0259970:three_prime_UTR 30.0%
!! TACAATCAAGGTTTTTAAGG+TGG + chr2_2:57452480-57452499 Msa0259970:three_prime_UTR 30.0%
AAAGTTTCATAAAAACGGTG+AGG + chr2_2:57452507-57452526 Msa0259970:three_prime_UTR 30.0%
CTGTGTCTATGTTTATTAGT+AGG + chr2_2:57452577-57452596 Msa0259970:three_prime_UTR 30.0%
ATAGACCAAAACCCTAATAG+GGG + chr2_2:57446595-57446614 Msa0259970:five_prime_UTR 35.0%
TACTAGAAGAACCCCTATTA+GGG - chr2_2:57446609-57446628 None:intergenic 35.0%
TTACTAGAAGAACCCCTATT+AGG - chr2_2:57446610-57446629 None:intergenic 35.0%
! GTTGATGAAAGCGATGAAAT+TGG - chr2_2:57446650-57446669 None:intergenic 35.0%
! CTTTTCCTATTGTTAAACCC+CGG - chr2_2:57447577-57447596 None:intergenic 35.0%
AAAATACTGCGAAAGAAGCA+AGG - chr2_2:57447727-57447746 None:intergenic 35.0%
TGACATAAAATCCAGGGAAA+AGG - chr2_2:57447760-57447779 None:intergenic 35.0%
CAGTGGAAGAAAAGATCAAA+CGG - chr2_2:57447793-57447812 None:intergenic 35.0%
! GTGCTCAAAAGATTTTACAG+TGG - chr2_2:57447810-57447829 None:intergenic 35.0%
!! TTGTTAGTGGTCTTGTTTGT+AGG - chr2_2:57447849-57447868 None:intergenic 35.0%
!! AATTGATTTGGCTGTGTATG+GGG + chr2_2:57447882-57447901 Msa0259970:intron 35.0%
AATTAAGCTGAACAGATGTG+AGG - chr2_2:57448046-57448065 None:intergenic 35.0%
GATGATCGCTAGAAGAAAAA+GGG - chr2_2:57448100-57448119 None:intergenic 35.0%
AGATGATCGCTAGAAGAAAA+AGG - chr2_2:57448101-57448120 None:intergenic 35.0%
TCTATAACAAGTGATTGTGC+AGG + chr2_2:57448118-57448137 Msa0259970:intron 35.0%
GAGATTTGGATCAAATGTTC+AGG + chr2_2:57448286-57448305 Msa0259970:CDS 35.0%
!! TATCTTTTTGGTATGCAAGG+TGG + chr2_2:57448635-57448654 Msa0259970:CDS 35.0%
CCCAACAACTTGTATTTCAA+TGG + chr2_2:57448818-57448837 Msa0259970:CDS 35.0%
TTGTATTTCAATGGATCACC+TGG + chr2_2:57448827-57448846 Msa0259970:CDS 35.0%
CTCAGGCCATAGTTATTAAA+TGG - chr2_2:57448917-57448936 None:intergenic 35.0%
TTTAATAACTATGGCCTGAG+TGG + chr2_2:57448917-57448936 Msa0259970:CDS 35.0%
AGAATGGGAAATCAAATTGC+AGG + chr2_2:57449127-57449146 Msa0259970:CDS 35.0%
AGATACATCGGATCAACATA+AGG - chr2_2:57449169-57449188 None:intergenic 35.0%
CTCATGTACTGAAGATACAT+CGG - chr2_2:57449181-57449200 None:intergenic 35.0%
AGTAATTCCTGTCTACAGAT+GGG - chr2_2:57449246-57449265 None:intergenic 35.0%
AAGTAATTCCTGTCTACAGA+TGG - chr2_2:57449247-57449266 None:intergenic 35.0%
ATCTGTAGACAGGAATTACT+TGG + chr2_2:57449246-57449265 Msa0259970:CDS 35.0%
TCTGTAGACAGGAATTACTT+GGG + chr2_2:57449247-57449266 Msa0259970:CDS 35.0%
ACATTGTATTGTGACTTCTG+AGG - chr2_2:57449331-57449350 None:intergenic 35.0%
GTCACAATACAATGTTCCAT+TGG + chr2_2:57449336-57449355 Msa0259970:CDS 35.0%
TCCAACCATCATGGTTATTA+TGG + chr2_2:57449376-57449395 Msa0259970:CDS 35.0%
TCCATAATAACCATGATGGT+TGG - chr2_2:57449380-57449399 None:intergenic 35.0%
CAGAAGCAAAATGCATATTC+AGG - chr2_2:57449504-57449523 None:intergenic 35.0%
! CTGAATATGCATTTTGCTTC+TGG + chr2_2:57449502-57449521 Msa0259970:CDS 35.0%
! AAATTTTGCTTCGTCTCTGT+TGG + chr2_2:57449585-57449604 Msa0259970:CDS 35.0%
! AGGTATACCTTTTTATAGCG+TGG + chr2_2:57449676-57449695 Msa0259970:intron 35.0%
AACATCACCACGCTATAAAA+AGG - chr2_2:57449686-57449705 None:intergenic 35.0%
! CGATGTCTTTGGTAATTATG+TGG + chr2_2:57449885-57449904 Msa0259970:CDS 35.0%
TGGTAATTATGTGGTTCAGA+AGG + chr2_2:57449894-57449913 Msa0259970:CDS 35.0%
TTTGAGTGACAATTTGCATC+TGG + chr2_2:57449967-57449986 Msa0259970:intron 35.0%
! ACACTTAGCCTTCAAATGTA+TGG + chr2_2:57450059-57450078 Msa0259970:CDS 35.0%
TCTGGACCAGAAGATTAAAA+TGG + chr2_2:57450215-57450234 Msa0259970:CDS 35.0%
AAAATGGTTCAAGAGCTTGA+TGG + chr2_2:57450231-57450250 Msa0259970:CDS 35.0%
CAATACACTTCTGAATGACA+TGG - chr2_2:57450293-57450312 None:intergenic 35.0%
!! TTTGTGCACTTTAAAGTCCT+TGG + chr2_2:57450443-57450462 Msa0259970:intron 35.0%
!!! ATCTAGCTTTTCTGCACTTT+TGG + chr2_2:57450753-57450772 Msa0259970:intron 35.0%
! TGAGCATAAAGCATTAAGGA+TGG - chr2_2:57451058-57451077 None:intergenic 35.0%
! CGATTGAGCATAAAGCATTA+AGG - chr2_2:57451062-57451081 None:intergenic 35.0%
CTAGAAGTTTGGATCACAAA+CGG - chr2_2:57451093-57451112 None:intergenic 35.0%
!! CAAAAGGACAAAGTATTGGA+TGG - chr2_2:57451124-57451143 None:intergenic 35.0%
AGGACAAAAGGACAAAGTAT+TGG - chr2_2:57451128-57451147 None:intergenic 35.0%
! ATGCTGTTATTTACAAGGAG+TGG - chr2_2:57451199-57451218 None:intergenic 35.0%
! AGCACATGCTGTTATTTACA+AGG - chr2_2:57451204-57451223 None:intergenic 35.0%
ACAATCATCAAGGAATTAGC+AGG + chr2_2:57451252-57451271 Msa0259970:CDS 35.0%
GCATCTCATTTACAAGCAAT+AGG - chr2_2:57451359-57451378 None:intergenic 35.0%
TTGCTTGTAAATGAGATGCT+TGG + chr2_2:57451360-57451379 Msa0259970:CDS 35.0%
AAATGAGATGCTTGGAACTA+CGG + chr2_2:57451368-57451387 Msa0259970:CDS 35.0%
AAAGGAAAAGAAACCTGAAG+AGG - chr2_2:57451405-57451424 None:intergenic 35.0%
CTTCAACTAAGCAAAGCTAA+AGG - chr2_2:57451446-57451465 None:intergenic 35.0%
!! TTAGTTGAAGCTTGTTAAGC+TGG + chr2_2:57451456-57451475 Msa0259970:intron 35.0%
TAATCCAAGAGGCGAATATT+TGG + chr2_2:57451503-57451522 Msa0259970:intron 35.0%
!!! GTTTTAGCTAGCTTTAAGTG+TGG + chr2_2:57451583-57451602 Msa0259970:intron 35.0%
TCAATAACTTCAGCATCGTT+TGG - chr2_2:57451757-57451776 None:intergenic 35.0%
ATCATGTTCCTCTTATATGC+AGG + chr2_2:57451834-57451853 Msa0259970:intron 35.0%
AAAGAATTAGTTCACGCTGT+TGG - chr2_2:57451921-57451940 None:intergenic 35.0%
! GCATTGAAAAAGTACACCTA+TGG + chr2_2:57451964-57451983 Msa0259970:CDS 35.0%
AAAACTCAATAGAGCATGCA+TGG - chr2_2:57452120-57452139 None:intergenic 35.0%
CTATTTATCTCTGTCTGTGA+TGG + chr2_2:57452311-57452330 Msa0259970:three_prime_UTR 35.0%
!! CATAGATTTTAAGAGAGGTG+AGG + chr2_2:57452399-57452418 Msa0259970:three_prime_UTR 35.0%
!! GTCATTTTATCTTCCATGCA+GGG - chr2_2:57452458-57452477 None:intergenic 35.0%
CTGTACAAAATGTTGCTATG+TGG + chr2_2:57452550-57452569 Msa0259970:three_prime_UTR 35.0%
! AAGAACCCCTATTAGGGTTT+TGG - chr2_2:57446603-57446622 None:intergenic 40.0%
GATGAAAGCGATGAAATTGG+CGG - chr2_2:57446647-57446666 None:intergenic 40.0%
TTGAGGGTTAAGTGTAGTGA+TGG + chr2_2:57447029-57447048 Msa0259970:five_prime_UTR 40.0%
TGAGGGTTAAGTGTAGTGAT+GGG + chr2_2:57447030-57447049 Msa0259970:five_prime_UTR 40.0%
TGTTGTCTGATATGGGTAGA+AGG + chr2_2:57447089-57447108 Msa0259970:CDS 40.0%
! AAGTTTTCCGGGAATGGTTT+TGG + chr2_2:57447334-57447353 Msa0259970:CDS 40.0%
! CAATCCTCCTTTGATAGCAA+AGG - chr2_2:57447442-57447461 None:intergenic 40.0%
! CTTTGCTATCAAAGGAGGAT+TGG + chr2_2:57447440-57447459 Msa0259970:CDS 40.0%
! AGGTTTTCGCAGAGACTAAA+AGG + chr2_2:57447463-57447482 Msa0259970:CDS 40.0%
! TTTTCGCAGAGACTAAAAGG+CGG + chr2_2:57447466-57447485 Msa0259970:CDS 40.0%
CAATTGGTGGAATTGGAGAT+AGG + chr2_2:57447497-57447516 Msa0259970:CDS 40.0%
GTTAATGGAGCTGATGAGAA+TGG + chr2_2:57447526-57447545 Msa0259970:CDS 40.0%
CAATAGGAAAAGAGAGACTG+AGG + chr2_2:57447585-57447604 Msa0259970:CDS 40.0%
! GAGCCTTGCAGAAATTTTTC+AGG + chr2_2:57447699-57447718 Msa0259970:CDS 40.0%
GCACCTGAAAAATTTCTGCA+AGG - chr2_2:57447705-57447724 None:intergenic 40.0%
TTCATCAAATGCGTTACGAC+TGG - chr2_2:57448192-57448211 None:intergenic 40.0%
TCCAAATCTCAAACCATCAG+TGG - chr2_2:57448276-57448295 None:intergenic 40.0%
GCATAAGAATATGAAGCCTG+TGG - chr2_2:57448338-57448357 None:intergenic 40.0%
TATTCTTATGCTGCTGCACT+TGG + chr2_2:57448347-57448366 Msa0259970:CDS 40.0%
ATGTCTCATCTGGCATCAAT+GGG + chr2_2:57448498-57448517 Msa0259970:CDS 40.0%
GATATTGCATCTGCATTGTC+TGG + chr2_2:57448527-57448546 Msa0259970:CDS 40.0%
! ACTCAACTTGTGATGGGAAA+TGG - chr2_2:57448592-57448611 None:intergenic 40.0%
CATCAGACTCAACTTGTGAT+GGG - chr2_2:57448598-57448617 None:intergenic 40.0%
ACATCAGACTCAACTTGTGA+TGG - chr2_2:57448599-57448618 None:intergenic 40.0%
GCAGCACGCATATTTAAAGA+AGG + chr2_2:57448673-57448692 Msa0259970:CDS 40.0%
CACTTCTCTTACCTGAATCA+GGG - chr2_2:57448730-57448749 None:intergenic 40.0%
AATTAGAACCATCTGAAGGC+TGG - chr2_2:57448892-57448911 None:intergenic 40.0%
GGTGAATTAGAACCATCTGA+AGG - chr2_2:57448896-57448915 None:intergenic 40.0%
GCATATTACCAGTTCCAAGT+TGG - chr2_2:57448985-57449004 None:intergenic 40.0%
! TGCAGCAACGTTTTCAAACA+GGG - chr2_2:57449011-57449030 None:intergenic 40.0%
AATTCTTGAGTCCATTCCAG+GGG - chr2_2:57449050-57449069 None:intergenic 40.0%
GAATTCTTGAGTCCATTCCA+GGG - chr2_2:57449051-57449070 None:intergenic 40.0%
AGAATTCTTGAGTCCATTCC+AGG - chr2_2:57449052-57449071 None:intergenic 40.0%
! GGAATGGACTCAAGAATTCT+TGG + chr2_2:57449052-57449071 Msa0259970:CDS 40.0%
ATGGACTCAAGAATTCTTGG+AGG + chr2_2:57449055-57449074 Msa0259970:CDS 40.0%
TGTGCATGTTCTCAGTAGAA+TGG + chr2_2:57449111-57449130 Msa0259970:CDS 40.0%
GTGCATGTTCTCAGTAGAAT+GGG + chr2_2:57449112-57449131 Msa0259970:CDS 40.0%
ATGGGAAATCAAATTGCAGG+TGG + chr2_2:57449130-57449149 Msa0259970:CDS 40.0%
CGATGTATCTTCAGTACATG+AGG + chr2_2:57449179-57449198 Msa0259970:CDS 40.0%
! GAGCTTCAGAAAGCATATCT+TGG + chr2_2:57449292-57449311 Msa0259970:CDS 40.0%
CAATACAATGTTCCATTGGG+TGG + chr2_2:57449340-57449359 Msa0259970:CDS 40.0%
GTGGATAAAGAGTTTGCCAT+TGG - chr2_2:57449442-57449461 None:intergenic 40.0%
TCTTTATCCACTTCTCCAGT+TGG + chr2_2:57449451-57449470 Msa0259970:CDS 40.0%
TTCAGGTCATTGTGCCTAAT+AGG - chr2_2:57449487-57449506 None:intergenic 40.0%
!!! TGCATTTTGCTTCTGGAATG+AGG + chr2_2:57449509-57449528 Msa0259970:CDS 40.0%
CTGGTCATGTTGTTGAATTC+AGG + chr2_2:57449656-57449675 Msa0259970:CDS 40.0%
!! ATTGGCAGTGCTGATCAATA+TGG + chr2_2:57449766-57449785 Msa0259970:intron 40.0%
!! TTGGCAGTGCTGATCAATAT+GGG + chr2_2:57449767-57449786 Msa0259970:intron 40.0%
!!! ATCTGGCAGTTTTTTGAGCA+TGG + chr2_2:57449984-57450003 Msa0259970:intron 40.0%
GAGTTAGCCAACAAGCTTTA+TGG + chr2_2:57450026-57450045 Msa0259970:CDS 40.0%
AACATGGCCATAAAGCTTGT+TGG - chr2_2:57450036-57450055 None:intergenic 40.0%
CTCGACAACCATACATTTGA+AGG - chr2_2:57450070-57450089 None:intergenic 40.0%
GTCCAGATCAACAACTTCTA+TGG - chr2_2:57450202-57450221 None:intergenic 40.0%
ACACTATCAACCCATCCATA+TGG + chr2_2:57450372-57450391 Msa0259970:CDS 40.0%
ACATCTTTACCTGTATCACC+CGG - chr2_2:57450401-57450420 None:intergenic 40.0%
TTTAGGAGCAGTTAGCATGT+TGG + chr2_2:57450549-57450568 Msa0259970:CDS 40.0%
ATAGTTGCCATACTGATCCT+GGG - chr2_2:57450575-57450594 None:intergenic 40.0%
!! ACAGAGAGTACTGTATGTGA+TGG - chr2_2:57450904-57450923 None:intergenic 40.0%
TGGAGAAGCAACTAGAAGTT+TGG - chr2_2:57451104-57451123 None:intergenic 40.0%
ATGATTGTAGAACGCTCATG+AGG - chr2_2:57451240-57451259 None:intergenic 40.0%
TGAGCGTTCTACAATCATCA+AGG + chr2_2:57451242-57451261 Msa0259970:CDS 40.0%
GAAGTTTGCCTCTAATGTTG+TGG + chr2_2:57451299-57451318 Msa0259970:CDS 40.0%
ACACTTCTCCACAACATTAG+AGG - chr2_2:57451310-57451329 None:intergenic 40.0%
AAGCTGGATGTTGTCCAAAT+AGG + chr2_2:57451472-57451491 Msa0259970:intron 40.0%
AGCTGGATGTTGTCCAAATA+GGG + chr2_2:57451473-57451492 Msa0259970:intron 40.0%
GGATTATTGCAGACCCTATT+TGG - chr2_2:57451489-57451508 None:intergenic 40.0%
CAAACCAAATATTCGCCTCT+TGG - chr2_2:57451510-57451529 None:intergenic 40.0%
CATCATTGCCTGCATATAAG+AGG - chr2_2:57451845-57451864 None:intergenic 40.0%
! TTATGTTGTACAGAAGGTGC+TGG + chr2_2:57451882-57451901 Msa0259970:CDS 40.0%
AGCGACAATATGTTTCCCAT+AGG - chr2_2:57451983-57452002 None:intergenic 40.0%
!! ACGTGTAATTTGTTGCAGAG+AGG + chr2_2:57452164-57452183 Msa0259970:intron 40.0%
TCAGTCTCCTCATACTACTT+AGG + chr2_2:57452198-57452217 Msa0259970:CDS 40.0%
CAGTCTCCTCATACTACTTA+GGG + chr2_2:57452199-57452218 Msa0259970:CDS 40.0%
AGTCTCCTCATACTACTTAG+GGG + chr2_2:57452200-57452219 Msa0259970:CDS 40.0%
TCTTTGATGCAGGAGAACAA+AGG - chr2_2:57452276-57452295 None:intergenic 40.0%
GAGGTTCAGATGTGTGATTA+TGG + chr2_2:57452418-57452437 Msa0259970:three_prime_UTR 40.0%
!! GGTCATTTTATCTTCCATGC+AGG - chr2_2:57452459-57452478 None:intergenic 40.0%
!! TTTCAGCTCGTAGCGTTGAT+GGG + chr2_2:57446865-57446884 Msa0259970:five_prime_UTR 45.0%
!! TGTAGTGATGGGTAGTGATC+AGG + chr2_2:57447041-57447060 Msa0259970:five_prime_UTR 45.0%
TCATTACCACCACCAATCAC+TGG - chr2_2:57447115-57447134 None:intergenic 45.0%
!! AGTGATTGGTGGTGGTAATG+AGG + chr2_2:57447114-57447133 Msa0259970:CDS 45.0%
!! GTGATTGGTGGTGGTAATGA+GGG + chr2_2:57447115-57447134 Msa0259970:CDS 45.0%
! GTTGTTTGGAGGTGGTTCTA+CGG + chr2_2:57447288-57447307 Msa0259970:CDS 45.0%
! GCTGCAGTTTCGAAGTTTTC+CGG + chr2_2:57447322-57447341 Msa0259970:CDS 45.0%
! CTGCAGTTTCGAAGTTTTCC+GGG + chr2_2:57447323-57447342 Msa0259970:CDS 45.0%
! GTTTCGAAGTTTTCCGGGAA+TGG + chr2_2:57447328-57447347 Msa0259970:CDS 45.0%
CTCAGAACCAAAACCATTCC+CGG - chr2_2:57447344-57447363 None:intergenic 45.0%
!! TTGGTTCTGAGGAAGAGCTT+AGG + chr2_2:57447353-57447372 Msa0259970:CDS 45.0%
! TCCTCCTCCTTTGCTATCAA+AGG + chr2_2:57447432-57447451 Msa0259970:CDS 45.0%
! TCCTTTGATAGCAAAGGAGG+AGG - chr2_2:57447436-57447455 None:intergenic 45.0%
! TCCTCCTTTGCTATCAAAGG+AGG + chr2_2:57447435-57447454 Msa0259970:CDS 45.0%
! TCCTCCTTTGATAGCAAAGG+AGG - chr2_2:57447439-57447458 None:intergenic 45.0%
TGCTATCAAAGGAGGATTGG+AGG + chr2_2:57447443-57447462 Msa0259970:CDS 45.0%
GCTTCTGCAATTGGTGGAAT+TGG + chr2_2:57447490-57447509 Msa0259970:CDS 45.0%
TTGGTGGAATTGGAGATAGG+AGG + chr2_2:57447500-57447519 Msa0259970:CDS 45.0%
TGGAATTGGAGATAGGAGGA+AGG + chr2_2:57447504-57447523 Msa0259970:CDS 45.0%
GGAGATAGGAGGAAGGTTAA+TGG + chr2_2:57447511-57447530 Msa0259970:CDS 45.0%
AATGGAGCTGATGAGAATGG+TGG + chr2_2:57447529-57447548 Msa0259970:CDS 45.0%
! TGATGAGAATGGTGGAAGAG+CGG + chr2_2:57447537-57447556 Msa0259970:CDS 45.0%
TTCCTATTGTTAAACCCCGG+AGG - chr2_2:57447574-57447593 None:intergenic 45.0%
TAGGAAAAGAGAGACTGAGG+CGG + chr2_2:57447588-57447607 Msa0259970:CDS 45.0%
GTGGCTGATGAGAAAACTAG+AGG + chr2_2:57447610-57447629 Msa0259970:CDS 45.0%
AAACTAGAGGTTCTGCTGAG+TGG + chr2_2:57447623-57447642 Msa0259970:CDS 45.0%
AACTAGAGGTTCTGCTGAGT+GGG + chr2_2:57447624-57447643 Msa0259970:CDS 45.0%
! TGCATTCGTTTCCTTTTCCC+TGG + chr2_2:57447746-57447765 Msa0259970:intron 45.0%
TCGCTAGAAGAAAAAGGGTC+TGG - chr2_2:57448095-57448114 None:intergenic 45.0%
AGTGATTGTGCAGGATGACA+TGG + chr2_2:57448127-57448146 Msa0259970:intron 45.0%
GTGATTGTGCAGGATGACAT+GGG + chr2_2:57448128-57448147 Msa0259970:intron 45.0%
! GCCACTGATGGTTTGAGATT+TGG + chr2_2:57448272-57448291 Msa0259970:CDS 45.0%
AGGAGTAGTGCTTCGTGATA+GGG - chr2_2:57448381-57448400 None:intergenic 45.0%
ACAACTCTCCCACTACCAAT+AGG - chr2_2:57448446-57448465 None:intergenic 45.0%
TTGATGCCAGATGAGACATC+AGG - chr2_2:57448497-57448516 None:intergenic 45.0%
GATGTCTCATCTGGCATCAA+TGG + chr2_2:57448497-57448516 Msa0259970:CDS 45.0%
TCAACAGATGACGTGCTAGA+AGG + chr2_2:57448560-57448579 Msa0259970:CDS 45.0%
! TTTTGGTATGCAAGGTGGTC+AGG + chr2_2:57448640-57448659 Msa0259970:CDS 45.0%
!! GAATCAGGGTGAGCTGTTTT+CGG - chr2_2:57448716-57448735 None:intergenic 45.0%
AAAACAGCTCACCCTGATTC+AGG + chr2_2:57448716-57448735 Msa0259970:CDS 45.0%
CCACTTCTCTTACCTGAATC+AGG - chr2_2:57448731-57448750 None:intergenic 45.0%
CCTGATTCAGGTAAGAGAAG+TGG + chr2_2:57448728-57448747 Msa0259970:CDS 45.0%
TCAGGTAAGAGAAGTGGAAG+CGG + chr2_2:57448734-57448753 Msa0259970:CDS 45.0%
AGACATGAGAAGTCCATCCT+TGG + chr2_2:57448760-57448779 Msa0259970:CDS 45.0%
TGAGAAGTCCATCCTTGGAT+AGG + chr2_2:57448765-57448784 Msa0259970:CDS 45.0%
AACCACCTCCACCACTATAA+GGG - chr2_2:57448856-57448875 None:intergenic 45.0%
AAACCACCTCCACCACTATA+AGG - chr2_2:57448857-57448876 None:intergenic 45.0%
AATAACTATGGCCTGAGTGG+TGG + chr2_2:57448920-57448939 Msa0259970:CDS 45.0%
ATAACTATGGCCTGAGTGGT+GGG + chr2_2:57448921-57448940 Msa0259970:CDS 45.0%
TCCTTCATGGCTAACCAACT+TGG + chr2_2:57448968-57448987 Msa0259970:CDS 45.0%
!! TCCAAGTTGGTTAGCCATGA+AGG - chr2_2:57448972-57448991 None:intergenic 45.0%
ATGGCTAACCAACTTGGAAC+TGG + chr2_2:57448974-57448993 Msa0259970:CDS 45.0%
! GCAGCAACGTTTTCAAACAG+GGG - chr2_2:57449010-57449029 None:intergenic 45.0%
! CTGCAGCAACGTTTTCAAAC+AGG - chr2_2:57449012-57449031 None:intergenic 45.0%
GACTCAAGAATTCTTGGAGG+TGG + chr2_2:57449058-57449077 Msa0259970:CDS 45.0%
CTGAGAACATGCACATCAGA+TGG - chr2_2:57449106-57449125 None:intergenic 45.0%
AAGTTGTGCAGCAGCATACT+CGG - chr2_2:57449209-57449228 None:intergenic 45.0%
TTAACGACCCATCTGTAGAC+AGG + chr2_2:57449236-57449255 Msa0259970:CDS 45.0%
GTTCCATTGGGTGGTAAATC+CGG + chr2_2:57449349-57449368 Msa0259970:CDS 45.0%
GGAAATCCTGCATATGGTGT+TGG + chr2_2:57449397-57449416 Msa0259970:CDS 45.0%
GACAAACCAACACCATATGC+AGG - chr2_2:57449406-57449425 None:intergenic 45.0%
!! GGTGTTGGTTTGTCTTATCC+AGG + chr2_2:57449412-57449431 Msa0259970:CDS 45.0%
GTCTTATCCAGGAAGTCCAA+TGG + chr2_2:57449423-57449442 Msa0259970:CDS 45.0%
TTGGATCTGGCAGTCCTATT+AGG + chr2_2:57449470-57449489 Msa0259970:CDS 45.0%
! TCTGGAATGAGGAATGTAGC+TGG + chr2_2:57449520-57449539 Msa0259970:CDS 45.0%
CTGGAATGAGGAATGTAGCT+GGG + chr2_2:57449521-57449540 Msa0259970:CDS 45.0%
TGGAATGAGGAATGTAGCTG+GGG + chr2_2:57449522-57449541 Msa0259970:CDS 45.0%
CATCTACGTTTCCAGCATCT+AGG - chr2_2:57449564-57449583 None:intergenic 45.0%
! ATAGCGTGGTGATGTTCTGA+TGG + chr2_2:57449690-57449709 Msa0259970:intron 45.0%
! GTCATCAAAGCAAGAGCATG+TGG - chr2_2:57449865-57449884 None:intergenic 45.0%
! GCTTTGATGACCGATGTCTT+TGG + chr2_2:57449874-57449893 Msa0259970:CDS 45.0%
GTTGGCTAACTCTCTTCTCT+GGG - chr2_2:57450018-57450037 None:intergenic 45.0%
! TGTTGGCTAACTCTCTTCTC+TGG - chr2_2:57450019-57450038 None:intergenic 45.0%
GAAGGCTAAGTGTCAGAACA+TGG - chr2_2:57450052-57450071 None:intergenic 45.0%
GGCCATAGAAGTTGTTGATC+TGG + chr2_2:57450197-57450216 Msa0259970:intron 45.0%
! ATTTGCATGGCAGAGAGTAC+TGG + chr2_2:57450480-57450499 Msa0259970:intron 45.0%
CATAGTTGCCATACTGATCC+TGG - chr2_2:57450576-57450595 None:intergenic 45.0%
TCAACAAGTCTGGCAAGCAA+TGG - chr2_2:57450644-57450663 None:intergenic 45.0%
! CGCTTCTCTTCGTGTTTTTC+TGG + chr2_2:57450795-57450814 Msa0259970:intron 45.0%
TAACAGCATGTGCTTGAGCA+TGG + chr2_2:57451210-57451229 Msa0259970:intron 45.0%
AACAGCATGTGCTTGAGCAT+GGG + chr2_2:57451211-57451230 Msa0259970:intron 45.0%
CATTAGAGGCAAACTTCTGC+TGG - chr2_2:57451296-57451315 None:intergenic 45.0%
!! GTGGAGAAGTGTTTGACCTT+TGG + chr2_2:57451318-57451337 Msa0259970:CDS 45.0%
!! GAGAAGTGTTTGACCTTTGG+AGG + chr2_2:57451321-57451340 Msa0259970:CDS 45.0%
ACAAGCAATAGGCGTTCAGA+AGG - chr2_2:57451348-57451367 None:intergenic 45.0%
GGATGAAAATGAGCCTCTTC+AGG + chr2_2:57451389-57451408 Msa0259970:CDS 45.0%
AGGGTCTGCAATAATCCAAG+AGG + chr2_2:57451492-57451511 Msa0259970:intron 45.0%
!! GTAGAGAAACTTGTTGCTGC+CGG + chr2_2:57452006-57452025 Msa0259970:CDS 45.0%
TCCTCATACTACTTAGGGGA+GGG + chr2_2:57452204-57452223 Msa0259970:exon 45.0%
GTTGTCTGTACAGCTAACTG+AGG + chr2_2:57452235-57452254 Msa0259970:three_prime_UTR 45.0%
TGATGCAGGAGAACAAAGGA+GGG - chr2_2:57452272-57452291 None:intergenic 45.0%
TTGATGCAGGAGAACAAAGG+AGG - chr2_2:57452273-57452292 None:intergenic 45.0%
!! TGTGATGGATAGTAGCCGAT+TGG + chr2_2:57452326-57452345 Msa0259970:three_prime_UTR 45.0%
! GTTTCAGCTCGTAGCGTTGA+TGG + chr2_2:57446864-57446883 Msa0259970:five_prime_UTR 50.0%
!! TTCAGCTCGTAGCGTTGATG+GGG + chr2_2:57446866-57446885 Msa0259970:five_prime_UTR 50.0%
ATGGGTAGAAGGCCAGTGAT+TGG + chr2_2:57447100-57447119 Msa0259970:CDS 50.0%
! GGTGGTAATGAGGGTTCGTT+TGG + chr2_2:57447124-57447143 Msa0259970:CDS 50.0%
! GGATGTTGCTTCGCGATCAA+CGG + chr2_2:57447170-57447189 Msa0259970:CDS 50.0%
GTTCGTTGAGTGCAGTTGGA+GGG + chr2_2:57447266-57447285 Msa0259970:CDS 50.0%
AGTGCAGTTGGAGGGTTGTT+TGG + chr2_2:57447274-57447293 Msa0259970:CDS 50.0%
!!! CGGGAATGGTTTTGGTTCTG+AGG + chr2_2:57447342-57447361 Msa0259970:CDS 50.0%
AGCAAAGGAGGAGGAAGTCT+GGG - chr2_2:57447427-57447446 None:intergenic 50.0%
TAGCAAAGGAGGAGGAAGTC+TGG - chr2_2:57447428-57447447 None:intergenic 50.0%
AAAGGCGGAGCTTCTGCAAT+TGG + chr2_2:57447481-57447500 Msa0259970:CDS 50.0%
CACCTCCGGGGTTTAACAAT+AGG + chr2_2:57447569-57447588 Msa0259970:CDS 50.0%
ACTAGAGGTTCTGCTGAGTG+GGG + chr2_2:57447625-57447644 Msa0259970:CDS 50.0%
!! CTCATTGGTTTGCCAGGACT+AGG + chr2_2:57447658-57447677 Msa0259970:CDS 50.0%
GTTTGCCAGGACTAGGTCTT+GGG + chr2_2:57447665-57447684 Msa0259970:CDS 50.0%
TTAGTCCCAAGACCTAGTCC+TGG - chr2_2:57447673-57447692 None:intergenic 50.0%
GGACATAACACCTCTGTCAC+AGG + chr2_2:57448149-57448168 Msa0259970:CDS 50.0%
TCAAATGCGTTACGACTGGC+TGG - chr2_2:57448188-57448207 None:intergenic 50.0%
TCTCAAACCATCAGTGGCTG+AGG - chr2_2:57448270-57448289 None:intergenic 50.0%
TCACCTGCTTCCCAAAATGC+TGG + chr2_2:57448311-57448330 Msa0259970:CDS 50.0%
TTCCCAAAATGCTGGTCCAC+AGG + chr2_2:57448319-57448338 Msa0259970:CDS 50.0%
! AGCCTGTGGACCAGCATTTT+GGG - chr2_2:57448324-57448343 None:intergenic 50.0%
! AAGCCTGTGGACCAGCATTT+TGG - chr2_2:57448325-57448344 None:intergenic 50.0%
TCTTATGCTGCTGCACTTGG+TGG + chr2_2:57448350-57448369 Msa0259970:CDS 50.0%
CAGGAGTAGTGCTTCGTGAT+AGG - chr2_2:57448382-57448401 None:intergenic 50.0%
TGATCCACAACACGTTGCCA+GGG + chr2_2:57448400-57448419 Msa0259970:CDS 50.0%
TCCCACTACCAATAGGTGTG+GGG - chr2_2:57448439-57448458 None:intergenic 50.0%
CTCCCACTACCAATAGGTGT+GGG - chr2_2:57448440-57448459 None:intergenic 50.0%
TCTCCCACTACCAATAGGTG+TGG - chr2_2:57448441-57448460 None:intergenic 50.0%
GTTGTTGCTGCTGAGAAGAG+AGG + chr2_2:57448461-57448480 Msa0259970:CDS 50.0%
ACCAGTCCTGATGTCTCATC+TGG + chr2_2:57448488-57448507 Msa0259970:CDS 50.0%
ATGCAAGGTGGTCAGGATCA+TGG + chr2_2:57448647-57448666 Msa0259970:CDS 50.0%
CAGGTAAGAGAAGTGGAAGC+GGG + chr2_2:57448735-57448754 Msa0259970:CDS 50.0%
AAGTCCATCCTTGGATAGGC+AGG + chr2_2:57448769-57448788 Msa0259970:CDS 50.0%
ACCACCTCCACCACTATAAG+GGG - chr2_2:57448855-57448874 None:intergenic 50.0%
TCTGAAGGCTGGTATTGTGC+AGG - chr2_2:57448881-57448900 None:intergenic 50.0%
GCACAATACCAGCCTTCAGA+TGG + chr2_2:57448881-57448900 Msa0259970:CDS 50.0%
GTATGCTGGAAATCCTGCTG+TGG + chr2_2:57448943-57448962 Msa0259970:CDS 50.0%
! GCAACGTTTTCAAACAGGGG+TGG - chr2_2:57449007-57449026 None:intergenic 50.0%
GATGGAGAAGCAACTCCAGA+GGG - chr2_2:57449088-57449107 None:intergenic 50.0%
AGATGGAGAAGCAACTCCAG+AGG - chr2_2:57449089-57449108 None:intergenic 50.0%
AGTTGTGCAGCAGCATACTC+GGG - chr2_2:57449208-57449227 None:intergenic 50.0%
ACCATGATGGTTGGAACCAC+CGG - chr2_2:57449371-57449390 None:intergenic 50.0%
GAGTTTGCCATTGGACTTCC+TGG - chr2_2:57449433-57449452 None:intergenic 50.0%
TCCACTTCTCCAGTTGGATC+TGG + chr2_2:57449457-57449476 Msa0259970:CDS 50.0%
ATAGGACTGCCAGATCCAAC+TGG - chr2_2:57449469-57449488 None:intergenic 50.0%
TTTCCAGCATCTAGGTGCCA+TGG - chr2_2:57449556-57449575 None:intergenic 50.0%
! GTGCTGATCAATATGGGAGC+CGG + chr2_2:57449773-57449792 Msa0259970:intron 50.0%
TGGTTGTCGAGTCATCCAGA+AGG + chr2_2:57450079-57450098 Msa0259970:CDS 50.0%
CGCTGTGTACGAGATCAGAA+TGG + chr2_2:57450264-57450283 Msa0259970:CDS 50.0%
CAACCCATCCATATGGTTGC+CGG + chr2_2:57450379-57450398 Msa0259970:CDS 50.0%
AACCCATCCATATGGTTGCC+GGG + chr2_2:57450380-57450399 Msa0259970:CDS 50.0%
TGTATCACCCGGCAACCATA+TGG - chr2_2:57450390-57450409 None:intergenic 50.0%
ATATGGTTGCCGGGTGATAC+AGG + chr2_2:57450389-57450408 Msa0259970:CDS 50.0%
ATGTTGGCCCAGGATCAGTA+TGG + chr2_2:57450565-57450584 Msa0259970:CDS 50.0%
GTATGGCAACTATGTCGTCC+AGG + chr2_2:57450582-57450601 Msa0259970:CDS 50.0%
GCATGGAACGCAACTAGCAA+CGG - chr2_2:57452103-57452122 None:intergenic 50.0%
CTCCTCATACTACTTAGGGG+AGG + chr2_2:57452203-57452222 Msa0259970:exon 50.0%
GATGCAGGAGAACAAAGGAG+GGG - chr2_2:57452271-57452290 None:intergenic 50.0%
! AATTGGCGGCGATTGGTTGC+TGG - chr2_2:57446633-57446652 None:intergenic 55.0%
GCGATGAAATTGGCGGCGAT+TGG - chr2_2:57446640-57446659 None:intergenic 55.0%
GGTAGAAGGCCAGTGATTGG+TGG + chr2_2:57447103-57447122 Msa0259970:CDS 55.0%
AGAAGGCCAGTGATTGGTGG+TGG + chr2_2:57447106-57447125 Msa0259970:CDS 55.0%
TGGATCAGCTCCTCCAACTG+TGG + chr2_2:57447240-57447259 Msa0259970:CDS 55.0%
ATCAGCTCCTCCAACTGTGG+AGG + chr2_2:57447243-57447262 Msa0259970:CDS 55.0%
TCAGCTCCTCCAACTGTGGA+GGG + chr2_2:57447244-57447263 Msa0259970:CDS 55.0%
AACGAACCCTCCACAGTTGG+AGG - chr2_2:57447253-57447272 None:intergenic 55.0%
CTCAACGAACCCTCCACAGT+TGG - chr2_2:57447256-57447275 None:intergenic 55.0%
GAGGGTTCGTTGAGTGCAGT+TGG + chr2_2:57447262-57447281 Msa0259970:CDS 55.0%
GGTTCGTTGAGTGCAGTTGG+AGG + chr2_2:57447265-57447284 Msa0259970:CDS 55.0%
GCAGTTGGAGGGTTGTTTGG+AGG + chr2_2:57447277-57447296 Msa0259970:CDS 55.0%
GTTGGAGGGTTGTTTGGAGG+TGG + chr2_2:57447280-57447299 Msa0259970:CDS 55.0%
! AGCGGTGTTTGCTACACCTC+CGG + chr2_2:57447555-57447574 Msa0259970:CDS 55.0%
GAAAAGAGAGACTGAGGCGG+TGG + chr2_2:57447591-57447610 Msa0259970:CDS 55.0%
!! GATGGGCTCATTGGTTTGCC+AGG + chr2_2:57447652-57447671 Msa0259970:CDS 55.0%
GGTTTGCCAGGACTAGGTCT+TGG + chr2_2:57447664-57447683 Msa0259970:CDS 55.0%
AGACGGAAAGCCTGTGACAG+AGG - chr2_2:57448162-57448181 None:intergenic 55.0%
! TTACGACTGGCTGGACGAGA+CGG - chr2_2:57448179-57448198 None:intergenic 55.0%
ATCCTCTGCAGAAGCAGAGC+TGG + chr2_2:57448226-57448245 Msa0259970:CDS 55.0%
CATCAGTGGCTGAGGAGTCA+TGG - chr2_2:57448262-57448281 None:intergenic 55.0%
CATGACTCCTCAGCCACTGA+TGG + chr2_2:57448260-57448279 Msa0259970:CDS 55.0%
!! GGACCAGCATTTTGGGAAGC+AGG - chr2_2:57448317-57448336 None:intergenic 55.0%
CTGGCAACGTGTTGTGGATC+AGG - chr2_2:57448401-57448420 None:intergenic 55.0%
CTGATCCACAACACGTTGCC+AGG + chr2_2:57448399-57448418 Msa0259970:CDS 55.0%
ATAGGTGTGGGGCAAGGACT+GGG - chr2_2:57448428-57448447 None:intergenic 55.0%
AATAGGTGTGGGGCAAGGAC+TGG - chr2_2:57448429-57448448 None:intergenic 55.0%
AGTCCTTGCCCCACACCTAT+TGG + chr2_2:57448428-57448447 Msa0259970:CDS 55.0%
CTACCAATAGGTGTGGGGCA+AGG - chr2_2:57448434-57448453 None:intergenic 55.0%
TGCCCCACACCTATTGGTAG+TGG + chr2_2:57448434-57448453 Msa0259970:CDS 55.0%
! GCCCCACACCTATTGGTAGT+GGG + chr2_2:57448435-57448454 Msa0259970:CDS 55.0%
GCCAGATGAGACATCAGGAC+TGG - chr2_2:57448492-57448511 None:intergenic 55.0%
TCGACCTGCCTATCCAAGGA+TGG - chr2_2:57448776-57448795 None:intergenic 55.0%
ATGCTCGACCTGCCTATCCA+AGG - chr2_2:57448780-57448799 None:intergenic 55.0%
TCACCTGGCTCCCCTTATAG+TGG + chr2_2:57448842-57448861 Msa0259970:CDS 55.0%
! TCCCCTTATAGTGGTGGAGG+TGG + chr2_2:57448851-57448870 Msa0259970:CDS 55.0%
TTCCAGCATACCCACCACTC+AGG - chr2_2:57448934-57448953 None:intergenic 55.0%
TCCTGCTGTGGCATCCTTCA+TGG + chr2_2:57448955-57448974 Msa0259970:CDS 55.0%
CGTTGCTGCAGCATCAGCTA+TGG + chr2_2:57449021-57449040 Msa0259970:CDS 55.0%
CCACCGGATTTACCACCCAA+TGG - chr2_2:57449355-57449374 None:intergenic 55.0%
CCATTGGGTGGTAAATCCGG+TGG + chr2_2:57449352-57449371 Msa0259970:CDS 55.0%
TCCGGTGGTTCCAACCATCA+TGG + chr2_2:57449367-57449386 Msa0259970:CDS 55.0%
GCCAGATCCAACTGGAGAAG+TGG - chr2_2:57449461-57449480 None:intergenic 55.0%
GAGGAATGTAGCTGGGGTCA+TGG + chr2_2:57449528-57449547 Msa0259970:CDS 55.0%
CACCCGGCAACCATATGGAT+GGG - chr2_2:57450385-57450404 None:intergenic 55.0%
TCACCCGGCAACCATATGGA+TGG - chr2_2:57450386-57450405 None:intergenic 55.0%
AGCAGTTAGCATGTTGGCCC+AGG + chr2_2:57450555-57450574 Msa0259970:CDS 55.0%
! ACACGAAGAGAAGCGCAGCT+GGG - chr2_2:57450790-57450809 None:intergenic 55.0%
! AACACGAAGAGAAGCGCAGC+TGG - chr2_2:57450791-57450810 None:intergenic 55.0%
GCGTTCAGAAGGACCTCCAA+AGG - chr2_2:57451337-57451356 None:intergenic 55.0%
!! GAGAAACTTGTTGCTGCCGG+AGG + chr2_2:57452009-57452028 Msa0259970:CDS 55.0%
TGGAACGCAACTAGCAACGG+CGG - chr2_2:57452100-57452119 None:intergenic 55.0%
GCCCTCCCCTAAGTAGTATG+AGG - chr2_2:57452208-57452227 None:intergenic 55.0%
ACACCTCTGATGTCCCTGCA+TGG + chr2_2:57452442-57452461 Msa0259970:three_prime_UTR 55.0%
CTTCCATGCAGGGACATCAG+AGG - chr2_2:57452448-57452467 None:intergenic 55.0%
TCGCGATCAACGGCGTCATG+AGG + chr2_2:57447180-57447199 Msa0259970:CDS 60.0%
GGCGGAGCTTCTGCAATTGG+TGG + chr2_2:57447484-57447503 Msa0259970:CDS 60.0%
! GCGGTGTTTGCTACACCTCC+GGG + chr2_2:57447556-57447575 Msa0259970:CDS 60.0%
! CGGTGTTTGCTACACCTCCG+GGG + chr2_2:57447557-57447576 Msa0259970:CDS 60.0%
AGAGGTTCTGCTGAGTGGGG+TGG + chr2_2:57447628-57447647 Msa0259970:CDS 60.0%
AGCCAGCTCTGCTTCTGCAG+AGG - chr2_2:57448231-57448250 None:intergenic 60.0%
CCACCACTATAAGGGGAGCC+AGG - chr2_2:57448848-57448867 None:intergenic 60.0%
CCTGGCTCCCCTTATAGTGG+TGG + chr2_2:57448845-57448864 Msa0259970:CDS 60.0%
GGCTCCCCTTATAGTGGTGG+AGG + chr2_2:57448848-57448867 Msa0259970:CDS 60.0%
GCCATGAAGGATGCCACAGC+AGG - chr2_2:57448959-57448978 None:intergenic 60.0%
AGCTATGGCGTCCCCTGGAA+TGG + chr2_2:57449036-57449055 Msa0259970:CDS 60.0%
! CTTGGAGGTGGTTTGCCCTC+TGG + chr2_2:57449070-57449089 Msa0259970:CDS 60.0%
TAGCTGGGGTCATGGCACCA+TGG + chr2_2:57449536-57449555 Msa0259970:CDS 60.0%
GCACCATGGCACCTAGATGC+TGG + chr2_2:57449550-57449569 Msa0259970:CDS 60.0%
GGAACGCAACTAGCAACGGC+GGG - chr2_2:57452099-57452118 None:intergenic 60.0%
TCTGCTGAGTGGGGTGGCGA+TGG + chr2_2:57447634-57447653 Msa0259970:CDS 65.0%
CTGCTGAGTGGGGTGGCGAT+GGG + chr2_2:57447635-57447654 Msa0259970:CDS 65.0%
! TGGGGTGGCGATGGGCTCAT+TGG + chr2_2:57447643-57447662 Msa0259970:CDS 65.0%
GGAGCCCTGGCAACGTGTTG+TGG - chr2_2:57448407-57448426 None:intergenic 65.0%
!! GGCCTGAGTGGTGGGTATGC+TGG + chr2_2:57448929-57448948 Msa0259970:CDS 65.0%
GCATCAGCTATGGCGTCCCC+TGG + chr2_2:57449031-57449050 Msa0259970:CDS 65.0%
GGGGCAAGGACTGGGAGCCC+TGG - chr2_2:57448420-57448439 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 57446549 57452677 57446549 ID=Msa0259970;Name=Msa0259970
chr2_2 mRNA 57446549 57452677 57446549 ID=Msa0259970-mRNA-1;Parent=Msa0259970;Name=Msa0259970-mRNA-1;_AED=0.04;_eAED=0.04;_QI=539|1|1|1|1|1|9|458|1050
chr2_2 exon 57446549 57447720 57446549 ID=Msa0259970-mRNA-1:exon:17431;Parent=Msa0259970-mRNA-1
chr2_2 exon 57448140 57449677 57448140 ID=Msa0259970-mRNA-1:exon:17432;Parent=Msa0259970-mRNA-1
chr2_2 exon 57449774 57449915 57449774 ID=Msa0259970-mRNA-1:exon:17433;Parent=Msa0259970-mRNA-1
chr2_2 exon 57449993 57450100 57449993 ID=Msa0259970-mRNA-1:exon:17434;Parent=Msa0259970-mRNA-1
chr2_2 exon 57450198 57450410 57450198 ID=Msa0259970-mRNA-1:exon:17435;Parent=Msa0259970-mRNA-1
chr2_2 exon 57450493 57450603 57450493 ID=Msa0259970-mRNA-1:exon:17436;Parent=Msa0259970-mRNA-1
chr2_2 exon 57451216 57451410 57451216 ID=Msa0259970-mRNA-1:exon:17437;Parent=Msa0259970-mRNA-1
chr2_2 exon 57451856 57452030 57451856 ID=Msa0259970-mRNA-1:exon:17438;Parent=Msa0259970-mRNA-1
chr2_2 exon 57452182 57452677 57452182 ID=Msa0259970-mRNA-1:exon:17439;Parent=Msa0259970-mRNA-1
chr2_2 five_prime_UTR 57446549 57447087 57446549 ID=Msa0259970-mRNA-1:five_prime_utr;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57447088 57447720 57447088 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57448140 57449677 57448140 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57449774 57449915 57449774 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57449993 57450100 57449993 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57450198 57450410 57450198 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57450493 57450603 57450493 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57451216 57451410 57451216 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57451856 57452030 57451856 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 CDS 57452182 57452219 57452182 ID=Msa0259970-mRNA-1:cds;Parent=Msa0259970-mRNA-1
chr2_2 three_prime_UTR 57452220 57452677 57452220 ID=Msa0259970-mRNA-1:three_prime_utr;Parent=Msa0259970-mRNA-1
Gene Sequence

>Msa0259970

ATGTTGTCTGATATGGGTAGAAGGCCAGTGATTGGTGGTGGTAATGAGGGTTCGTTTGGAGATGAATTTGAAAAGGAAATAGGGATGTTGCTTCGCGATCAACGGCGTCATGAGGTTGATGATCATGAACCTGAACTTAATTTGTATAGGAGTGGATCAGCTCCTCCAACTGTGGAGGGTTCGTTGAGTGCAGTTGGAGGGTTGTTTGGAGGTGGTTCTACGGCTGCTACTGCTGCTGCAGTTTCGAAGTTTTCCGGGAATGGTTTTGGTTCTGAGGAAGAGCTTAGGTCTGATCCTGCGTATCTTCAATATTATTACTCTAATGTTAATTTGAATCCCAGACTTCCTCCTCCTTTGCTATCAAAGGAGGATTGGAGGTTTTCGCAGAGACTAAAAGGCGGAGCTTCTGCAATTGGTGGAATTGGAGATAGGAGGAAGGTTAATGGAGCTGATGAGAATGGTGGAAGAGCGGTGTTTGCTACACCTCCGGGGTTTAACAATAGGAAAAGAGAGACTGAGGCGGTGGCTGATGAGAAAACTAGAGGTTCTGCTGAGTGGGGTGGCGATGGGCTCATTGGTTTGCCAGGACTAGGTCTTGGGACTAAACAAAAGAGCCTTGCAGAAATTTTTCAGGATGACATGGGACATAACACCTCTGTCACAGGCTTTCCGTCTCGTCCAGCCAGTCGTAACGCATTTGATGAAAATGTTGAGATTACATCCTCTGCAGAAGCAGAGCTGGCTCATTTGCGCCATGACTCCTCAGCCACTGATGGTTTGAGATTTGGATCAAATGTTCAGGGATCACCTGCTTCCCAAAATGCTGGTCCACAGGCTTCATATTCTTATGCTGCTGCACTTGGTGGTTCTTCCCTATCACGAAGCACTACTCCTGATCCACAACACGTTGCCAGGGCTCCCAGTCCTTGCCCCACACCTATTGGTAGTGGGAGAGTTGTTGCTGCTGAGAAGAGAGGTATTACCAGTCCTGATGTCTCATCTGGCATCAATGGGTCTGCAGATATTGCATCTGCATTGTCTGGCATGAATTTGTCAACAGATGACGTGCTAGAAGGCGATAACCATTTCCCATCACAAGTTGAGTCTGATGTTAATAATTATCAAAGATATCTTTTTGGTATGCAAGGTGGTCAGGATCATGGCAAGCAGCACGCATATTTAAAGAAGGCTGAATCAGGACACATGCCGAAAACAGCTCACCCTGATTCAGGTAAGAGAAGTGGAAGCGGGTCAGACATGAGAAGTCCATCCTTGGATAGGCAGGTCGAGCATCAAAAGTCTGCTGTTTCTCCCAACAACTTGTATTTCAATGGATCACCTGGCTCCCCTTATAGTGGTGGAGGTGGTTTGCCTGCACAATACCAGCCTTCAGATGGTTCTAATTCACCATTTAATAACTATGGCCTGAGTGGTGGGTATGCTGGAAATCCTGCTGTGGCATCCTTCATGGCTAACCAACTTGGAACTGGTAATATGCCACCCCTGTTTGAAAACGTTGCTGCAGCATCAGCTATGGCGTCCCCTGGAATGGACTCAAGAATTCTTGGAGGTGGTTTGCCCTCTGGAGTTGCTTCTCCATCTGATGTGCATGTTCTCAGTAGAATGGGAAATCAAATTGCAGGTGGTGCTCTTCAGTCTCCTTATGTTGATCCGATGTATCTTCAGTACATGAGGACACCCGAGTATGCTGCTGCACAACTTGCTGCTCTTAACGACCCATCTGTAGACAGGAATTACTTGGGCAACTCATATATGAATTTACTTGAGCTTCAGAAAGCATATCTTGGATCTCTGCTTTCACCTCAGAAGTCACAATACAATGTTCCATTGGGTGGTAAATCCGGTGGTTCCAACCATCATGGTTATTATGGAAATCCTGCATATGGTGTTGGTTTGTCTTATCCAGGAAGTCCAATGGCAAACTCTTTATCCACTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGACCTGAATATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGTCATGGCACCATGGCACCTAGATGCTGGAAACGTAGATGAAAATTTTGCTTCGTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACAAAGTGCTTTGAGCTTTCTGAAATTTCTGGTCATGTTGTTGAATTCAGTGCTGATCAATATGGGAGCCGGTTTATTCAACAAAAGCTTGAAACAGCAACCACTGAAGAAAAGAATATGGTTTATCAGGAAATCACGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAGAAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTTTATGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGTCGAGTCATCCAGAAGGCCATAGAAGTTGTTGATCTGGACCAGAAGATTAAAATGGTTCAAGAGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGCAACCATGTCATTCAGAAGTGTATTGAATGCGTACCTGAAGATGCAATTGATTTTATTGTCTCAACTTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGCCGGGTGATACAGAGAGTACTGGAGCATTGTGAAAACCCTGACACACAACAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTGGCCCAGGATCAGTATGGCAACTATGTCGTCCAGCATGTGCTTGAGCATGGGAAACCTCATGAGCGTTCTACAATCATCAAGGAATTAGCAGGCAATATAGTTCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTGGAGAAGTGTTTGACCTTTGGAGGTCCTTCTGAACGCCTATTGCTTGTAAATGAGATGCTTGGAACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAGTTTGCTAATTATGTTGTACAGAAGGTGCTGGAGACTTGTGATGACCAACAGCGTGAACTAATTCTTTCTCGAATTAAAGTTCATTTGAATGCATTGAAAAAGTACACCTATGGGAAACATATTGTCGCTCGTGTAGAGAAACTTGTTGCTGCCGGAGAGAGGAGAATTGCTGCTCAGTCTCCTCATACTACTTAG
Protein sequence

>Msa0259970

MLSDMGRRPVIGGGNEGSFGDEFEKEIGMLLRDQRRHEVDDHEPELNLYRSGSAPPTVEGSLSAVGGLFGGGSTAATAAAVSKFSGNGFGSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFSQRLKGGASAIGGIGDRRKVNGADENGGRAVFATPPGFNNRKRETEAVADEKTRGSAEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNAFDENVEITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQASYSYAAALGGSSLSRSTTPDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDVSSGINGSADIASALSGMNLSTDDVLEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHPDSGKRSGSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMASPGMDSRILGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAGNVDENFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT*