AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1278080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278080 MtrunA17_Chr8g0347631 93.868 212 12 1 1 211 1 212 1.78e-140 390
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1278080 AT2G04039.1 63.291 158 52 3 58 210 42 198 9.53e-55 173
Msa1278080 AT2G04039.2 75.926 108 25 1 104 210 57 164 6.61e-54 170
Msa1278080 AT2G04039.3 56.757 111 42 3 58 163 42 151 5.67e-25 97.4

Find 54 sgRNAs with CRISPR-Local

Find 136 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTACTGTTGCTGCTTT+TGG 0.124923 8_3:+14133030 None:intergenic
AAGGCAACCCCTATTCATTT+TGG 0.130826 8_3:-14131840 Msa1278080:CDS
CTTCAAAACTTATTGTCTTT+TGG 0.181488 8_3:-14131622 Msa1278080:CDS
AATAAACCAGCGACAGAAAA+TGG 0.240132 8_3:-14133815 Msa1278080:five_prime_UTR
TTCTTTCCCACAGGAATTAC+AGG 0.261997 8_3:-14131814 Msa1278080:intron
TTCTGTCGCTGGTTTATTGA+TGG 0.276406 8_3:+14133820 None:intergenic
TCTAATATTGCTTTCAATGA+AGG 0.341804 8_3:+14132949 None:intergenic
CTCATTGACTATGTGGTATA+TGG 0.382028 8_3:-14131477 Msa1278080:three_prime_UTR
AAGAAGGCCCAAAATGAATA+GGG 0.412873 8_3:+14131832 None:intergenic
AAAGAAGGCCCAAAATGAAT+AGG 0.419642 8_3:+14131831 None:intergenic
GGCTTAGCTGGAGCTTTAGC+AGG 0.433823 8_3:+14133003 None:intergenic
CACGTTTGTTGATGAATGCC+CGG 0.446871 8_3:-14131400 Msa1278080:three_prime_UTR
TTCTTCTCATCAACTAGAAA+CGG 0.449513 8_3:+14131650 None:intergenic
ATCATCACCAATACTACCTT+TGG 0.454497 8_3:-14133630 Msa1278080:intron
CTCCTCCATCATCTGAGGTA+AGG 0.455147 8_3:+14132981 None:intergenic
AATATCAGAGAGATCTTGTT+GGG 0.459022 8_3:+14132924 None:intergenic
GAATCATCTACTAGTACATC+AGG 0.476468 8_3:-14133372 Msa1278080:intron
CACAAGGGATTATTCCTGTA+TGG 0.477768 8_3:-14131580 Msa1278080:CDS
AAAACACAGAAGAATGCAAA+TGG 0.496803 8_3:-14133762 Msa1278080:exon
GAGAATCAATCTTTCCATAC+AGG 0.504256 8_3:+14131566 None:intergenic
TGTGCTTGAACAGGTCCAAA+GGG 0.506399 8_3:-14131716 Msa1278080:intron
TTTAGCTACTGCTGAAACAA+AGG 0.509101 8_3:-14133073 Msa1278080:intron
TGTAATTCCTGTGGGAAAGA+AGG 0.510749 8_3:+14131816 None:intergenic
AAAAGCAGCAACAGTAAAGA+AGG 0.515492 8_3:-14133028 Msa1278080:CDS
ATTGGTGATGATGATGAGTT+AGG 0.523459 8_3:+14133641 None:intergenic
GATGACAGAGAAAACCCCTT+TGG 0.524451 8_3:+14131701 None:intergenic
CAATATCAGAGAGATCTTGT+TGG 0.526999 8_3:+14132923 None:intergenic
AGGCATACCAAAGGTAGTAT+TGG 0.529034 8_3:+14133623 None:intergenic
ACGTTTGTTGATGAATGCCC+GGG 0.529352 8_3:-14131399 Msa1278080:three_prime_UTR
TCCTCCATCATCTGAGGTAA+GGG 0.531229 8_3:+14132982 None:intergenic
TTGTTAAGAGGTGCAGCACT+TGG 0.532380 8_3:-14133734 Msa1278080:CDS
AGATCTCTCTGATATTGAGC+TGG 0.533275 8_3:-14132917 Msa1278080:CDS
TCTCTGTCATCTTACAACTC+AGG 0.533545 8_3:-14131689 Msa1278080:CDS
TTGAGAGACATGCAAAGAAG+AGG 0.542477 8_3:+14133676 None:intergenic
ACCTTGACTCATTGACTATG+TGG 0.544780 8_3:-14131484 Msa1278080:three_prime_UTR
TTGTCAGAAGCATACGTTGG+AGG 0.552359 8_3:+14133846 None:intergenic
TAAGCCCTTACCTCAGATGA+TGG 0.552759 8_3:-14132986 Msa1278080:CDS
TATTATGATTAACAGTTGGA+AGG 0.560411 8_3:-14131877 Msa1278080:intron
CAAGAACCATGTGGATCAGA+AGG 0.563549 8_3:-14133884 Msa1278080:five_prime_UTR
ATGTGCTTGAACAGGTCCAA+AGG 0.565480 8_3:-14131717 Msa1278080:intron
TACTGCTGAAACAAAGGAGG+AGG 0.583102 8_3:-14133067 Msa1278080:CDS
GTACGAAATAATCACAAACC+CGG 0.590236 8_3:+14131381 None:intergenic
TACATACCTGTAATTCCTGT+GGG 0.591415 8_3:+14131808 None:intergenic
CTTACCTCAGATGATGGAGG+AGG 0.618521 8_3:-14132980 Msa1278080:CDS
GTACATACCTGTAATTCCTG+TGG 0.624066 8_3:+14131807 None:intergenic
AGCTACTGCTGAAACAAAGG+AGG 0.625682 8_3:-14133070 Msa1278080:CDS
TACGAAATAATCACAAACCC+GGG 0.631214 8_3:+14131382 None:intergenic
ACATCCTCCTCCATCATCTG+AGG 0.640524 8_3:+14132976 None:intergenic
ACCACATAGTCAATGAGTCA+AGG 0.642220 8_3:+14131483 None:intergenic
GCCCTTACCTCAGATGATGG+AGG 0.648548 8_3:-14132983 Msa1278080:CDS
AGAAGGCCCAAAATGAATAG+GGG 0.671714 8_3:+14131833 None:intergenic
GTGCTTGAACAGGTCCAAAG+GGG 0.694256 8_3:-14131715 Msa1278080:intron
AATGAACCTTCTGATCCACA+TGG 0.715867 8_3:+14133878 None:intergenic
ATATTGTCTCAAGAACCATG+TGG 0.787556 8_3:-14133893 Msa1278080:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAAAAACATATAAT+AGG - chr8_3:14131493-14131512 Msa1278080:three_prime_UTR 10.0%
!!! TTTTATTTTGTTAGTTTAAT+TGG - chr8_3:14131971-14131990 Msa1278080:intron 10.0%
!!! TTTTTATTTCAAAAGTAGTA+AGG - chr8_3:14132551-14132570 Msa1278080:intron 15.0%
!!! TTAGCTTGATTTTATAAAAT+CGG - chr8_3:14132811-14132830 Msa1278080:intron 15.0%
!!! TTATGTTTAGTTTTTATTTG+TGG - chr8_3:14132850-14132869 Msa1278080:intron 15.0%
!! AATGAACATAATCAAAACTT+TGG - chr8_3:14131943-14131962 Msa1278080:intron 20.0%
!!! TATTATCCCATAGATATTTT+AGG - chr8_3:14132040-14132059 Msa1278080:intron 20.0%
!! TGTGATGTAATTAAAATTTG+TGG - chr8_3:14132185-14132204 Msa1278080:intron 20.0%
!! TTCAAAATAGCATTCAAAAT+AGG + chr8_3:14132508-14132527 None:intergenic 20.0%
!!! AAAGTGAACAACTATAATTT+TGG + chr8_3:14132603-14132622 None:intergenic 20.0%
!!! AAATTATAGTTGTTCACTTT+TGG - chr8_3:14132603-14132622 Msa1278080:intron 20.0%
!! TACAATTTCAAATAATTCCA+CGG - chr8_3:14133188-14133207 Msa1278080:intron 20.0%
!! AAACCATAGTTGAAAAATAA+AGG - chr8_3:14133288-14133307 Msa1278080:intron 20.0%
!!! TTATCAAGAGCTTTAAATTA+TGG - chr8_3:14133349-14133368 Msa1278080:intron 20.0%
!! TTGATATTATGATTAACAGT+TGG - chr8_3:14133401-14133420 Msa1278080:CDS 20.0%
!!! TTCAAAACTTATTGTCTTTT+GGG - chr8_3:14133661-14133680 Msa1278080:CDS 20.0%
!!! TCGTATACAAATTTTCATTT+TGG - chr8_3:14133737-14133756 Msa1278080:CDS 20.0%
! ACATAATCAAAACTTTGGTT+AGG - chr8_3:14131948-14131967 Msa1278080:intron 25.0%
! AAATCAGTTAGACTATTTAG+TGG + chr8_3:14132157-14132176 None:intergenic 25.0%
! TCTAATATTGCTTTCAATGA+AGG + chr8_3:14132336-14132355 None:intergenic 25.0%
!!! CTATAATTTTGGCGTTAAAT+TGG + chr8_3:14132592-14132611 None:intergenic 25.0%
!! AGCTAATTTTATATCACAGT+TGG + chr8_3:14132797-14132816 None:intergenic 25.0%
!!! TATTTTTCAACTATGGTTTG+AGG + chr8_3:14133287-14133306 None:intergenic 25.0%
!!! TCTCCTTTATTTTTCAACTA+TGG + chr8_3:14133294-14133313 None:intergenic 25.0%
! TATTATGATTAACAGTTGGA+AGG - chr8_3:14133405-14133424 Msa1278080:CDS 25.0%
!! CTTCAAAACTTATTGTCTTT+TGG - chr8_3:14133660-14133679 Msa1278080:CDS 25.0%
AAAACACAGAAGAATGCAAA+TGG - chr8_3:14131520-14131539 Msa1278080:three_prime_UTR 30.0%
AATATGAGCTGCATAAATTG+AGG + chr8_3:14131682-14131701 None:intergenic 30.0%
GACGTTCCTAAAATATCTAT+GGG + chr8_3:14132049-14132068 None:intergenic 30.0%
TGACGTTCCTAAAATATCTA+TGG + chr8_3:14132050-14132069 None:intergenic 30.0%
! TCACACTGATTAAGTATGAT+TGG - chr8_3:14132067-14132086 Msa1278080:intron 30.0%
AATATCAGAGAGATCTTGTT+GGG + chr8_3:14132361-14132380 None:intergenic 30.0%
! GACCATAAACTTTTACTTCT+AGG - chr8_3:14133131-14133150 Msa1278080:intron 30.0%
CTCCTAGAAGTAAAAGTTTA+TGG + chr8_3:14133136-14133155 None:intergenic 30.0%
!!! TGAAACATGGTTTTGTTAGA+AGG + chr8_3:14133262-14133281 None:intergenic 30.0%
TTCTTCTCATCAACTAGAAA+CGG + chr8_3:14133635-14133654 None:intergenic 30.0%
ATATTGTCTCAAGAACCATG+TGG - chr8_3:14131389-14131408 Msa1278080:three_prime_UTR 35.0%
!! TTTTTGTCAGAAGCATACGT+TGG + chr8_3:14131442-14131461 None:intergenic 35.0%
AATAAACCAGCGACAGAAAA+TGG - chr8_3:14131467-14131486 Msa1278080:three_prime_UTR 35.0%
! CAAATGGCACTTTTGTTAAG+AGG - chr8_3:14131536-14131555 Msa1278080:three_prime_UTR 35.0%
!! ATTGGTGATGATGATGAGTT+AGG + chr8_3:14131644-14131663 None:intergenic 35.0%
ATCATCACCAATACTACCTT+TGG - chr8_3:14131652-14131671 Msa1278080:CDS 35.0%
CATAAATTGAGGCATACCAA+AGG + chr8_3:14131671-14131690 None:intergenic 35.0%
GAATCATCTACTAGTACATC+AGG - chr8_3:14131910-14131929 Msa1278080:intron 35.0%
TTTAGCTACTGCTGAAACAA+AGG - chr8_3:14132209-14132228 Msa1278080:intron 35.0%
!!! TTCTTTACTGTTGCTGCTTT+TGG + chr8_3:14132255-14132274 None:intergenic 35.0%
AAAAGCAGCAACAGTAAAGA+AGG - chr8_3:14132254-14132273 Msa1278080:intron 35.0%
CAATATCAGAGAGATCTTGT+TGG + chr8_3:14132362-14132381 None:intergenic 35.0%
!!! TGATATTGAGCTGGTTTTTC+AGG - chr8_3:14132374-14132393 Msa1278080:intron 35.0%
! CTATATAACAAGGTACCCTA+TGG - chr8_3:14132482-14132501 Msa1278080:intron 35.0%
AGCATTCAAAATAGGCCATA+GGG + chr8_3:14132500-14132519 None:intergenic 35.0%
TAGCATTCAAAATAGGCCAT+AGG + chr8_3:14132501-14132520 None:intergenic 35.0%
TCAAACGTGATCAAACAAGT+TGG - chr8_3:14132670-14132689 Msa1278080:intron 35.0%
!! ACACATACTTAGGGCATTTT+AGG + chr8_3:14132759-14132778 None:intergenic 35.0%
AAATGCCCTAAGTATGTGTT+TGG - chr8_3:14132760-14132779 Msa1278080:intron 35.0%
AAGTCATTGTCTTAGTTGTG+AGG + chr8_3:14132993-14133012 None:intergenic 35.0%
AAGCAATGACAAACACATAC+TGG - chr8_3:14133033-14133052 Msa1278080:CDS 35.0%
! CATCTGAGATAATGACCAAT+TGG + chr8_3:14133098-14133117 None:intergenic 35.0%
ATGGTTTGAGGATTGAAACA+TGG + chr8_3:14133275-14133294 None:intergenic 35.0%
! GAAGGTTCCTTTCTGAAAAA+AGG - chr8_3:14133423-14133442 Msa1278080:CDS 35.0%
AAGAAGGCCCAAAATGAATA+GGG + chr8_3:14133453-14133472 None:intergenic 35.0%
AAAGAAGGCCCAAAATGAAT+AGG + chr8_3:14133454-14133473 None:intergenic 35.0%
TACATACCTGTAATTCCTGT+GGG + chr8_3:14133477-14133496 None:intergenic 35.0%
GGAATTGCTTTCTTAATAGC+AGG + chr8_3:14133509-14133528 None:intergenic 35.0%
CATTTAACTCGATGTAAGTG+AGG + chr8_3:14133530-14133549 None:intergenic 35.0%
TAACAACTATGTGCTTGAAC+AGG - chr8_3:14133557-14133576 Msa1278080:intron 35.0%
!!! CTTTTGGGTTGAAAAACGTT+TGG - chr8_3:14133676-14133695 Msa1278080:CDS 35.0%
GAGAATCAATCTTTCCATAC+AGG + chr8_3:14133719-14133738 None:intergenic 35.0%
! CTCATTGACTATGTGGTATA+TGG - chr8_3:14133805-14133824 Msa1278080:five_prime_UTR 35.0%
AATGAACCTTCTGATCCACA+TGG + chr8_3:14131407-14131426 None:intergenic 40.0%
!! TTCTGTCGCTGGTTTATTGA+TGG + chr8_3:14131465-14131484 None:intergenic 40.0%
! TCTATTCCATTTTCTGTCGC+TGG + chr8_3:14131476-14131495 None:intergenic 40.0%
TTGAGAGACATGCAAAGAAG+AGG + chr8_3:14131609-14131628 None:intergenic 40.0%
AGGCATACCAAAGGTAGTAT+TGG + chr8_3:14131662-14131681 None:intergenic 40.0%
AGATCTCTCTGATATTGAGC+TGG - chr8_3:14132365-14132384 Msa1278080:intron 40.0%
!!! GCTGGTTTTTCAGGACAATA+AGG - chr8_3:14132383-14132402 Msa1278080:intron 40.0%
TGATTGCGAATTTGCGATCT+CGG - chr8_3:14132459-14132478 Msa1278080:intron 40.0%
CTCGTCCAAACACATACTTA+GGG + chr8_3:14132768-14132787 None:intergenic 40.0%
ACTCGTCCAAACACATACTT+AGG + chr8_3:14132769-14132788 None:intergenic 40.0%
CAGTGAACCATCTTGATAAG+TGG - chr8_3:14132882-14132901 Msa1278080:intron 40.0%
CTATGGACCACTTATCAAGA+TGG + chr8_3:14132892-14132911 None:intergenic 40.0%
TCTTGATAAGTGGTCCATAG+TGG - chr8_3:14132892-14132911 Msa1278080:intron 40.0%
! ATCTTCTACTTCTGAAGGAC+GGG + chr8_3:14132955-14132974 None:intergenic 40.0%
! GATCTTCTACTTCTGAAGGA+CGG + chr8_3:14132956-14132975 None:intergenic 40.0%
CCATGATCTTCTACTTCTGA+AGG + chr8_3:14132960-14132979 None:intergenic 40.0%
CCTTCAGAAGTAGAAGATCA+TGG - chr8_3:14132957-14132976 Msa1278080:CDS 40.0%
TCTTAGTTGTGAGGATGAAG+AGG + chr8_3:14132984-14133003 None:intergenic 40.0%
TTTGCCTAACTGACACCAAT+TGG - chr8_3:14133080-14133099 Msa1278080:intron 40.0%
!! ATGACCAATTGGTGTCAGTT+AGG + chr8_3:14133087-14133106 None:intergenic 40.0%
! GCTTTTGATGCAACTGAATG+AGG + chr8_3:14133225-14133244 None:intergenic 40.0%
! AAGGCAACCCCTATTCATTT+TGG - chr8_3:14133442-14133461 Msa1278080:intron 40.0%
! AGGCAACCCCTATTCATTTT+GGG - chr8_3:14133443-14133462 Msa1278080:intron 40.0%
AGAAGGCCCAAAATGAATAG+GGG + chr8_3:14133452-14133471 None:intergenic 40.0%
TGTAATTCCTGTGGGAAAGA+AGG + chr8_3:14133469-14133488 None:intergenic 40.0%
TTCTTTCCCACAGGAATTAC+AGG - chr8_3:14133468-14133487 Msa1278080:intron 40.0%
GTACATACCTGTAATTCCTG+TGG + chr8_3:14133478-14133497 None:intergenic 40.0%
TCTCTGTCATCTTACAACTC+AGG - chr8_3:14133593-14133612 Msa1278080:intron 40.0%
AAAAACGTTTGGCAGCACAA+GGG - chr8_3:14133687-14133706 Msa1278080:CDS 40.0%
CACAAGGGATTATTCCTGTA+TGG - chr8_3:14133702-14133721 Msa1278080:CDS 40.0%
! ACCTTGACTCATTGACTATG+TGG - chr8_3:14133798-14133817 Msa1278080:five_prime_UTR 40.0%
ACCACATAGTCAATGAGTCA+AGG + chr8_3:14133802-14133821 None:intergenic 40.0%
CAAGAACCATGTGGATCAGA+AGG - chr8_3:14131398-14131417 Msa1278080:three_prime_UTR 45.0%
! TTGTCAGAAGCATACGTTGG+AGG + chr8_3:14131439-14131458 None:intergenic 45.0%
! TTGTTAAGAGGTGCAGCACT+TGG - chr8_3:14131548-14131567 Msa1278080:three_prime_UTR 45.0%
AGCTACTGCTGAAACAAAGG+AGG - chr8_3:14132212-14132231 Msa1278080:intron 45.0%
TACTGCTGAAACAAAGGAGG+AGG - chr8_3:14132215-14132234 Msa1278080:intron 45.0%
TAAGCCCTTACCTCAGATGA+TGG - chr8_3:14132296-14132315 Msa1278080:intron 45.0%
! TCCTCCATCATCTGAGGTAA+GGG + chr8_3:14132303-14132322 None:intergenic 45.0%
GCGATCTCGGCTATATAACA+AGG - chr8_3:14132472-14132491 Msa1278080:intron 45.0%
TGAGAAGTTGAGAGCTCCAA+AGG - chr8_3:14132708-14132727 Msa1278080:intron 45.0%
GAGAAGTTGAGAGCTCCAAA+GGG - chr8_3:14132709-14132728 Msa1278080:intron 45.0%
AGAAGTTGAGAGCTCCAAAG+GGG - chr8_3:14132710-14132729 Msa1278080:intron 45.0%
!! ATAAGTGGTCCATAGTGGAC+TGG - chr8_3:14132897-14132916 Msa1278080:intron 45.0%
! TTTCAAGTGCCAGTCCACTA+TGG + chr8_3:14132909-14132928 None:intergenic 45.0%
! TCTTCTACTTCTGAAGGACG+GGG + chr8_3:14132954-14132973 None:intergenic 45.0%
GAAGTAACGCAAGTCATCAC+TGG - chr8_3:14133158-14133177 Msa1278080:intron 45.0%
!!! GGGGTTGCCTTTTTTCAGAA+AGG + chr8_3:14133433-14133452 None:intergenic 45.0%
ATGTGCTTGAACAGGTCCAA+AGG - chr8_3:14133565-14133584 Msa1278080:intron 45.0%
TGTGCTTGAACAGGTCCAAA+GGG - chr8_3:14133566-14133585 Msa1278080:intron 45.0%
GATGACAGAGAAAACCCCTT+TGG + chr8_3:14133584-14133603 None:intergenic 45.0%
GAAAAACGTTTGGCAGCACA+AGG - chr8_3:14133686-14133705 Msa1278080:CDS 45.0%
! CACGTTTGTTGATGAATGCC+CGG - chr8_3:14133882-14133901 Msa1278080:five_prime_UTR 45.0%
! ACGTTTGTTGATGAATGCCC+GGG - chr8_3:14133883-14133902 Msa1278080:five_prime_UTR 45.0%
! ATCTGAGGTAAGGGCTTAGC+TGG + chr8_3:14132294-14132313 None:intergenic 50.0%
! CTCCTCCATCATCTGAGGTA+AGG + chr8_3:14132304-14132323 None:intergenic 50.0%
!! CTTACCTCAGATGATGGAGG+AGG - chr8_3:14132302-14132321 Msa1278080:intron 50.0%
ACATCCTCCTCCATCATCTG+AGG + chr8_3:14132309-14132328 None:intergenic 50.0%
GAAGTTGAGAGCTCCAAAGG+GGG - chr8_3:14132711-14132730 Msa1278080:intron 50.0%
TTTGAGCTCCTAACCCCCTT+TGG + chr8_3:14132727-14132746 None:intergenic 50.0%
ATGAGGCAACTTCTACACCG+TGG + chr8_3:14133208-14133227 None:intergenic 50.0%
! TTTTGGGCCTTCTTTCCCAC+AGG - chr8_3:14133459-14133478 Msa1278080:intron 50.0%
GTGCTTGAACAGGTCCAAAG+GGG - chr8_3:14133567-14133586 Msa1278080:intron 50.0%
! GGCTTAGCTGGAGCTTTAGC+AGG + chr8_3:14132282-14132301 None:intergenic 55.0%
! GCCCTTACCTCAGATGATGG+AGG - chr8_3:14132299-14132318 Msa1278080:intron 55.0%
TGAGAGCTCCAAAGGGGGTT+AGG - chr8_3:14132716-14132735 Msa1278080:intron 55.0%
TCTGAAGGACGGGGAGTCGT+TGG + chr8_3:14132945-14132964 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 14131384 14133920 14131384 ID=Msa1278080;Name=Msa1278080
chr8_3 mRNA 14131384 14133920 14131384 ID=Msa1278080-mRNA-1;Parent=Msa1278080;Name=Msa1278080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=149|1|1|1|1|1|5|187|211
chr8_3 exon 14131384 14131725 14131384 ID=Msa1278080-mRNA-1:exon:5571;Parent=Msa1278080-mRNA-1
chr8_3 exon 14131815 14131884 14131815 ID=Msa1278080-mRNA-1:exon:5570;Parent=Msa1278080-mRNA-1
chr8_3 exon 14132900 14133090 14132900 ID=Msa1278080-mRNA-1:exon:5569;Parent=Msa1278080-mRNA-1
chr8_3 exon 14133373 14133451 14133373 ID=Msa1278080-mRNA-1:exon:5568;Parent=Msa1278080-mRNA-1
chr8_3 exon 14133631 14133920 14133631 ID=Msa1278080-mRNA-1:exon:5567;Parent=Msa1278080-mRNA-1
chr8_3 five_prime_UTR 14133772 14133920 14133772 ID=Msa1278080-mRNA-1:five_prime_utr;Parent=Msa1278080-mRNA-1
chr8_3 CDS 14133631 14133771 14133631 ID=Msa1278080-mRNA-1:cds;Parent=Msa1278080-mRNA-1
chr8_3 CDS 14133373 14133451 14133373 ID=Msa1278080-mRNA-1:cds;Parent=Msa1278080-mRNA-1
chr8_3 CDS 14132900 14133090 14132900 ID=Msa1278080-mRNA-1:cds;Parent=Msa1278080-mRNA-1
chr8_3 CDS 14131815 14131884 14131815 ID=Msa1278080-mRNA-1:cds;Parent=Msa1278080-mRNA-1
chr8_3 CDS 14131571 14131725 14131571 ID=Msa1278080-mRNA-1:cds;Parent=Msa1278080-mRNA-1
chr8_3 three_prime_UTR 14131384 14131570 14131384 ID=Msa1278080-mRNA-1:three_prime_utr;Parent=Msa1278080-mRNA-1
Gene Sequence

>Msa1278080

ATGCAAATGGCACTTTTGTTAAGAGGTGCAGCACTTGGAGATTCTAGCTTTCGTTTGTGTTCTATATCTTCAACCTCTTCTTTGCATGTCTCTCAAAATGTTGTCATACCTAACTCATCATCATCACCAATACTACCTTTGATTGCAAGTAGATTTAAAGCAGTAAGCAGAAACAAGATTTCTTGCTCTGCAGTTCAAGAATCATCTACTAGTACATCAGCTACTGCTGAAACAAAGGAGGAGGTTAAAGCAGAAGCTCCAAAAGCAGCAACAGTAAAGAAGGCTCCTGCTAAAGCTCCAGCTAAGCCCTTACCTCAGATGATGGAGGAGGATGTGATTCCTTCATTGAAAGCAATATTAGAAGCCCAACAAGATCTCTCTGATATTGAGCTGGTTTTTCAGGACAATAAGTTGGAAGGTTCCTTTCTGAAAAAAGGCAACCCCTATTCATTTTGGGCCTTCTTTCCCACAGGAATTACAGGTCCAAAGGGGTTTTCTCTGTCATCTTACAACTCAGGAGCAAGCACTGTTGAACCGTTTCTAGTTGATGAGAAGAAAGTTACTTCAAAACTTATTGTCTTTTGGGTTGAAAAACGTTTGGCAGCACAAGGGATTATTCCTGTATGGAAAGATTGA

Protein sequence

>Msa1278080

MQMALLLRGAALGDSSFRLCSISSTSSLHVSQNVVIPNSSSSPILPLIASRFKAVSRNKISCSAVQESSTSTSATAETKEEVKAEAPKAATVKKAPAKAPAKPLPQMMEEDVIPSLKAILEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFSLSSYNSGASTVEPFLVDEKKVTSKLIVFWVEKRLAAQGIIPVWKD*