AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0339850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339850 MtrunA17_Chr2g0328561 98.476 1050 13 2 1 1050 1 1047 0.0 2134
Msa0339850 MtrunA17_Chr4g0031951 80.435 1058 162 12 1 1048 1 1023 0.0 1637
Msa0339850 MtrunA17_Chr5g0435601 56.444 1063 372 25 1 1043 9 1000 0.0 1074
Msa0339850 MtrunA17_Chr1g0199451 46.147 1051 441 24 18 1042 18 969 0.0 825
Msa0339850 MtrunA17_Chr2g0298151 49.652 574 250 16 478 1032 420 973 5.00e-162 504
Msa0339850 MtrunA17_Chr2g0298151 26.616 263 185 3 781 1042 650 905 8.04e-27 118
Msa0339850 MtrunA17_Chr5g0425961 32.817 323 204 7 713 1030 393 707 6.55e-46 177
Msa0339850 MtrunA17_Chr1g0207641 25.852 352 246 7 700 1043 118 462 1.07e-27 118
Msa0339850 MtrunA17_Chr2g0279091 32.203 177 115 2 853 1029 21 192 9.79e-26 105
Msa0339850 MtrunA17_Chr2g0279091 23.636 165 124 1 719 881 31 195 1.43e-12 67.8
Msa0339850 MtrunA17_Chr3g0134501 25.952 289 203 5 713 996 209 491 3.12e-24 108
Msa0339850 MtrunA17_Chr1g0202811 24.922 321 221 7 720 1029 94 405 2.05e-21 98.2
Msa0339850 MtrunA17_Chr2g0279101 32.609 138 89 2 713 846 424 561 9.15e-19 91.7
Msa0339850 MtrunA17_Chr5g0425331 28.994 169 115 3 746 910 19 186 1.20e-15 76.3
Msa0339850 MtrunA17_Chr2g0277761 22.807 285 187 8 718 991 114 376 1.88e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339850 AT2G29190.2 60.664 1055 316 19 1 1046 1 965 0.0 1156
Msa0339850 AT2G29190.1 60.664 1055 316 19 1 1046 1 965 0.0 1156
Msa0339850 AT2G29200.1 60.472 1060 306 21 1 1046 1 961 0.0 1142
Msa0339850 AT2G29200.2 60.472 1060 306 21 1 1046 1 961 0.0 1142
Msa0339850 AT2G29140.2 59.452 1058 315 23 1 1046 2 957 0.0 1114
Msa0339850 AT2G29140.1 59.452 1058 315 23 1 1046 2 957 0.0 1114
Msa0339850 AT3G10360.1 59.144 514 184 8 535 1046 506 995 0.0 601
Msa0339850 AT3G20250.1 56.039 414 165 3 633 1034 491 899 1.42e-153 479
Msa0339850 AT3G20250.1 26.792 265 185 4 779 1042 573 829 1.79e-23 107
Msa0339850 AT3G20250.1 51.282 78 30 2 50 124 59 131 3.74e-15 80.9
Msa0339850 AT3G20250.3 56.039 414 165 3 633 1034 527 935 4.02e-153 479
Msa0339850 AT3G20250.3 26.792 265 185 4 779 1042 609 865 1.47e-23 108
Msa0339850 AT3G20250.3 51.282 78 30 2 50 124 59 131 4.02e-15 80.9
Msa0339850 AT3G20250.2 56.039 414 165 3 633 1034 527 935 4.02e-153 479
Msa0339850 AT3G20250.2 26.792 265 185 4 779 1042 609 865 1.47e-23 108
Msa0339850 AT3G20250.2 51.282 78 30 2 50 124 59 131 4.02e-15 80.9
Msa0339850 AT4G25880.4 59.226 336 137 0 698 1033 515 850 9.19e-139 439
Msa0339850 AT4G25880.1 59.226 336 137 0 698 1033 515 850 1.45e-138 439
Msa0339850 AT4G25880.5 59.226 336 137 0 698 1033 515 850 1.45e-138 439
Msa0339850 AT4G25880.3 57.738 336 136 1 698 1033 515 844 2.19e-132 422
Msa0339850 AT4G25880.2 57.738 336 136 1 698 1033 515 844 3.05e-132 422
Msa0339850 AT1G22240.1 31.579 323 210 6 712 1030 195 510 1.33e-48 182
Msa0339850 AT1G78160.1 31.366 322 210 6 713 1030 331 645 7.64e-47 179
Msa0339850 AT1G78160.2 31.366 322 210 6 713 1030 333 647 8.59e-47 179
Msa0339850 AT5G56510.4 30.218 321 215 4 713 1029 275 590 8.15e-45 172
Msa0339850 AT5G56510.6 30.218 321 215 4 713 1029 275 590 8.15e-45 172
Msa0339850 AT5G56510.2 30.218 321 215 4 713 1029 275 590 8.15e-45 172
Msa0339850 AT5G56510.1 30.218 321 215 4 713 1029 275 590 8.15e-45 172
Msa0339850 AT5G56510.3 30.218 321 215 4 713 1029 275 590 8.15e-45 172
Msa0339850 AT5G56510.5 31.142 289 190 4 713 997 275 558 5.62e-41 160
Msa0339850 AT4G08840.1 31.546 317 204 7 718 1030 244 551 9.10e-41 159
Msa0339850 AT4G08840.1 26.957 230 149 7 713 933 314 533 3.35e-17 87.0
Msa0339850 AT4G08840.1 24.057 212 152 3 789 997 243 448 2.50e-14 77.8
Msa0339850 AT1G35730.2 29.141 326 215 7 713 1030 253 570 1.27e-37 150
Msa0339850 AT1G35730.1 29.141 326 215 7 713 1030 247 564 1.51e-37 149
Msa0339850 AT1G35750.1 30.581 327 204 10 713 1030 211 523 1.95e-35 142
Msa0339850 AT5G43090.1 20.186 322 242 4 718 1031 211 525 9.28e-19 91.7
Msa0339850 AT5G43110.1 19.335 331 247 7 711 1031 196 516 1.87e-14 77.8
Msa0339850 AT5G59280.1 21.327 211 162 2 791 1001 86 292 5.11e-12 68.9
Msa0339850 AT1G35850.2 22.047 254 187 6 791 1042 11 255 1.98e-11 66.2
Msa0339850 AT1G35850.1 24.176 273 180 10 789 1042 38 302 3.06e-11 66.2

Find 342 sgRNAs with CRISPR-Local

Find 488 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAGCTTTCTGAAATTTC+TGG 0.119870 2_4:+61131184 Msa0339850:CDS
GAAATTGAGGTGATAAATTA+TGG 0.158745 2_4:-61128274 None:intergenic
GAGTTAGCCAACAAGCTTTA+TGG 0.162586 2_4:+61131573 Msa0339850:CDS
CAATTTCATATCAGCAATTA+TGG 0.185841 2_4:+61128324 Msa0339850:five_prime_UTR
TCCAACCATCATGGTTATTA+TGG 0.193767 2_4:+61130923 Msa0339850:CDS
GATGAATTTGAAAAGGAAAT+AGG 0.195311 2_4:+61128695 Msa0339850:CDS
AAGCCTGTGGACCAGCATTT+TGG 0.205400 2_4:-61129869 None:intergenic
CTGGTCATGTTGTTGAATTC+AGG 0.227637 2_4:+61131203 Msa0339850:CDS
TTACTAGAAGAACCCCTATT+AGG 0.230784 2_4:-61128153 None:intergenic
AAATAGACCAAAACCCTAAT+AGG 0.233088 2_4:+61128139 Msa0339850:five_prime_UTR
GAGTTTGCCATTGGACTTCC+TGG 0.240216 2_4:-61130977 None:intergenic
GCCACTGATGGTTTGAGATT+TGG 0.253931 2_4:+61129819 Msa0339850:CDS
GGAGATAGGAGGAAGGTTAA+TGG 0.256678 2_4:+61129058 Msa0339850:CDS
AAGAACCCCTATTAGGGTTT+TGG 0.260809 2_4:-61128146 None:intergenic
CCACTTCTCTTACCTGAATC+AGG 0.267516 2_4:-61130275 None:intergenic
TGTTGGCTAACTCTCTTCTC+TGG 0.270844 2_4:-61131563 None:intergenic
CAAATATAAGCTTGTAGAAT+TGG 0.275277 2_4:-61134190 None:intergenic
AATTCACCATTTAATAACTA+TGG 0.283508 2_4:+61130455 Msa0339850:CDS
CCGATTGGTAATAAAATTAT+CGG 0.288684 2_4:+61133886 Msa0339850:three_prime_UTR
CTCAGGCCATAGTTATTAAA+TGG 0.313207 2_4:-61130461 None:intergenic
AAACCACCTCCACCACTATA+AGG 0.316731 2_4:-61130401 None:intergenic
GAGATTTGGATCAAATGTTC+AGG 0.317740 2_4:+61129833 Msa0339850:CDS
AGAAAAGAATATGGTTTATC+AGG 0.319439 2_4:+61131378 Msa0339850:CDS
CAGGAGTAGTGCTTCGTGAT+AGG 0.325311 2_4:-61129926 None:intergenic
AGTGCAGTTGGAGGGTTGTT+TGG 0.328365 2_4:+61128821 Msa0339850:CDS
CTTGGAGGTGGTTTGCCCTC+TGG 0.330027 2_4:+61130617 Msa0339850:CDS
TTCAGAATCAATCATCAAAA+AGG 0.332683 2_4:-61128378 None:intergenic
TACTAGAAGAACCCCTATTA+GGG 0.334435 2_4:-61128152 None:intergenic
CCCAACAACTTGTATTTCAA+TGG 0.337549 2_4:+61130365 Msa0339850:CDS
ATTGGCAGTGCTGATCAATA+TGG 0.338609 2_4:+61131313 Msa0339850:intron
GTTGATGAAAGCGATGAAAT+TGG 0.339624 2_4:-61128193 None:intergenic
AAAACAGCTCACCCTGATTC+AGG 0.339900 2_4:+61130263 Msa0339850:CDS
AAATATAAGCTTGTAGAATT+GGG 0.341180 2_4:-61134189 None:intergenic
AATAGACCAAAACCCTAATA+GGG 0.341479 2_4:+61128140 Msa0339850:five_prime_UTR
GCTTCTGCAATTGGTGGAAT+TGG 0.342634 2_4:+61129037 Msa0339850:CDS
AGAATTCTTGAGTCCATTCC+AGG 0.343201 2_4:-61130596 None:intergenic
TCTGGACCAGAAGATTAAAA+TGG 0.343695 2_4:+61131762 Msa0339850:CDS
GGATGAAAATGAGCCTCTTC+AGG 0.344030 2_4:+61132937 Msa0339850:CDS
TCTGCTGAGTGGGGTGGCGA+TGG 0.344605 2_4:+61129181 Msa0339850:CDS
TTGGATCTGGCAGTCCTATT+AGG 0.345867 2_4:+61131017 Msa0339850:CDS
CAGAAGCAAAATGCATATTC+AGG 0.354543 2_4:-61131048 None:intergenic
GGAATGGACTCAAGAATTCT+TGG 0.354552 2_4:+61130599 Msa0339850:CDS
TTCAGGTCATTGTGCCTAAT+AGG 0.357554 2_4:-61131031 None:intergenic
AATAGGTGTGGGGCAAGGAC+TGG 0.362763 2_4:-61129973 None:intergenic
AACCACTGAAGAAAAGAATA+TGG 0.364988 2_4:+61131369 Msa0339850:CDS
CAGTCTCCTCATACTACTTA+GGG 0.365149 2_4:+61133744 Msa0339850:CDS
GGCCATAGAAGTTGTTGATC+TGG 0.369059 2_4:+61131744 Msa0339850:intron
TCCTGCTGTGGCATCCTTCA+TGG 0.369127 2_4:+61130502 Msa0339850:CDS
TTTAGGTTATTTAACGGTTG+AGG 0.370741 2_4:+61128559 Msa0339850:five_prime_UTR
GTTTCAGCTCGTAGCGTTGA+TGG 0.373279 2_4:+61128410 Msa0339850:five_prime_UTR
CTGCTGAGTGGGGTGGCGAT+GGG 0.374192 2_4:+61129182 Msa0339850:CDS
ACACTTCTCCACAACATTAG+AGG 0.374528 2_4:-61132855 None:intergenic
CTCAGAACCAAAACCATTCC+CGG 0.376480 2_4:-61128888 None:intergenic
GTCCAGATCAACAACTTCTA+TGG 0.380935 2_4:-61131746 None:intergenic
ATGAATTTGAAAAGGAAATA+GGG 0.381115 2_4:+61128696 Msa0339850:CDS
GGTTTGCCAGGACTAGGTCT+TGG 0.383859 2_4:+61129211 Msa0339850:CDS
CAACCCATCCATATGGTTGC+CGG 0.384834 2_4:+61131926 Msa0339850:CDS
GTTTGCCAGGACTAGGTCTT+GGG 0.388587 2_4:+61129212 Msa0339850:CDS
CTGGCAACGTGTTGTGGATC+AGG 0.389618 2_4:-61129945 None:intergenic
CTGATCCACAACACGTTGCC+AGG 0.395126 2_4:+61129946 Msa0339850:CDS
GGTGGTAATGAGGGTTCGTT+TGG 0.397361 2_4:+61128671 Msa0339850:CDS
TCCACTTCTCCAGTTGGATC+TGG 0.397655 2_4:+61131004 Msa0339850:CDS
ATAAAATCAATTGCATCTTC+AGG 0.398406 2_4:-61131868 None:intergenic
TGGGGTGGCGATGGGCTCAT+TGG 0.401101 2_4:+61129190 Msa0339850:CDS
CTCGACAACCATACATTTGA+AGG 0.401988 2_4:-61131614 None:intergenic
GTGGAGAAGTGTTTGACCTT+TGG 0.406252 2_4:+61132866 Msa0339850:CDS
CTGTGTCTATGTTTATTAGT+AGG 0.411848 2_4:+61134122 Msa0339850:three_prime_UTR
GAGCTTCAGAAAGCATATCT+TGG 0.413464 2_4:+61130839 Msa0339850:CDS
CTCATTGGTTTGCCAGGACT+AGG 0.414551 2_4:+61129205 Msa0339850:CDS
GTTCCATTGGGTGGTAAATC+CGG 0.416423 2_4:+61130896 Msa0339850:CDS
AGTCCTTGCCCCACACCTAT+TGG 0.416627 2_4:+61129975 Msa0339850:CDS
AACCACCTCCACCACTATAA+GGG 0.417360 2_4:-61130400 None:intergenic
TAGCAAAGGAGGAGGAAGTC+TGG 0.420172 2_4:-61128972 None:intergenic
GCTTTGATGACCGATGTCTT+TGG 0.420200 2_4:+61131421 Msa0339850:CDS
GCAGTTGGAGGGTTGTTTGG+AGG 0.421442 2_4:+61128824 Msa0339850:CDS
TTTCAGCTCGTAGCGTTGAT+GGG 0.421502 2_4:+61128411 Msa0339850:five_prime_UTR
AGAATGGGAAATCAAATTGC+AGG 0.421672 2_4:+61130674 Msa0339850:CDS
ATTTGCATGGCAGAGAGTAC+TGG 0.426764 2_4:+61132027 Msa0339850:intron
GGCCTGAGTGGTGGGTATGC+TGG 0.429121 2_4:+61130476 Msa0339850:CDS
GCGGTGTTTGCTACACCTCC+GGG 0.431004 2_4:+61129103 Msa0339850:CDS
ACACTTAGCCTTCAAATGTA+TGG 0.431661 2_4:+61131606 Msa0339850:CDS
TGTTGTCTGATATGGGTAGA+AGG 0.432671 2_4:+61128636 Msa0339850:CDS
TCAGTCTCCTCATACTACTT+AGG 0.432743 2_4:+61133743 Msa0339850:CDS
ACTCAACTTGTGATGGGAAA+TGG 0.432894 2_4:-61130136 None:intergenic
TATTTAAAGAAGGCTGAATC+AGG 0.433743 2_4:+61130230 Msa0339850:CDS
CTCCTATACAAATTAAGTTC+AGG 0.435558 2_4:-61128764 None:intergenic
GGGGCAAGGACTGGGAGCCC+TGG 0.435922 2_4:-61129964 None:intergenic
CATAGTTGCCATACTGATCC+TGG 0.435987 2_4:-61132120 None:intergenic
AATTGGCGGCGATTGGTTGC+TGG 0.437823 2_4:-61128176 None:intergenic
TATTCTTATGCTGCTGCACT+TGG 0.438248 2_4:+61129894 Msa0339850:CDS
TGTATCACCCGGCAACCATA+TGG 0.439118 2_4:-61131934 None:intergenic
AAAGGCGGAGCTTCTGCAAT+TGG 0.441477 2_4:+61129028 Msa0339850:CDS
AGCGGTGTTTGCTACACCTC+CGG 0.444772 2_4:+61129102 Msa0339850:CDS
TCCATTGAAATACAAGTTGT+TGG 0.445718 2_4:-61130366 None:intergenic
ACCAGTCCTGATGTGTCATC+TGG 0.446180 2_4:+61130035 Msa0339850:CDS
ATATGGTTGCCGGGTGATAC+AGG 0.446850 2_4:+61131936 Msa0339850:CDS
ATAGGTGTGGGGCAAGGACT+GGG 0.447203 2_4:-61129972 None:intergenic
CACCTCCGGGGTTTAACAAT+AGG 0.447693 2_4:+61129116 Msa0339850:CDS
CTTTGCTATCAAAGGAGGAT+TGG 0.447733 2_4:+61128987 Msa0339850:CDS
GATGTGTCATCTGGCATCAA+TGG 0.449698 2_4:+61130044 Msa0339850:CDS
TCTTATGCTGCTGCACTTGG+TGG 0.450757 2_4:+61129897 Msa0339850:CDS
TCAACAGATGACGTGCTAGA+AGG 0.450839 2_4:+61130107 Msa0339850:CDS
GTTGGCTAACTCTCTTCTCT+GGG 0.452754 2_4:-61131562 None:intergenic
ATCTGTAGACAGGAATTACT+TGG 0.453537 2_4:+61130793 Msa0339850:CDS
TCACCTGGCTCCCCTTATAG+TGG 0.453570 2_4:+61130389 Msa0339850:CDS
TCCAAGTTGGTTAGCCATGA+AGG 0.455908 2_4:-61130516 None:intergenic
ATGGCTAACCAACTTGGAAC+TGG 0.455921 2_4:+61130521 Msa0339850:CDS
GCGATGAAATTGGCGGCGAT+TGG 0.456046 2_4:-61128183 None:intergenic
ATAGGACTGCCAGATCCAAC+TGG 0.456552 2_4:-61131013 None:intergenic
TTAGGTTATTTAACGGTTGA+GGG 0.459739 2_4:+61128560 Msa0339850:five_prime_UTR
GAGAAGTGTTTGACCTTTGG+AGG 0.460349 2_4:+61132869 Msa0339850:CDS
TGCTATCAAAGGAGGATTGG+AGG 0.460502 2_4:+61128990 Msa0339850:CDS
AAATTGAGGTGATAAATTAT+GGG 0.460598 2_4:-61128273 None:intergenic
TCTTTATCCACTTCTCCAGT+TGG 0.460661 2_4:+61130998 Msa0339850:CDS
TGCCCCACACCTATTGGTAG+TGG 0.460898 2_4:+61129981 Msa0339850:CDS
ACCATGATGGTTGGAACCAC+CGG 0.461246 2_4:-61130915 None:intergenic
TCCTTCATGGCTAACCAACT+TGG 0.462350 2_4:+61130515 Msa0339850:CDS
GTTGGAGGGTTGTTTGGAGG+TGG 0.463395 2_4:+61128827 Msa0339850:CDS
ACAACTCTCCCACTACCAAT+AGG 0.464142 2_4:-61129990 None:intergenic
GGTGTTGGTTTGTCTTATCC+AGG 0.464786 2_4:+61130959 Msa0339850:CDS
GTCACAATACAATGTTCCAT+TGG 0.466232 2_4:+61130883 Msa0339850:CDS
ATCCTCTGCAGAAGCAGAGC+TGG 0.467908 2_4:+61129773 Msa0339850:CDS
TTGGTTCTGAGGAAGAGCTT+AGG 0.467990 2_4:+61128900 Msa0339850:CDS
AACTAGAGGTTCTGCTGAGT+GGG 0.469464 2_4:+61129171 Msa0339850:CDS
GATATTGCATCTGCATTGTC+TGG 0.470238 2_4:+61130074 Msa0339850:CDS
GTTTGGAGATGAATTTGAAA+AGG 0.470900 2_4:+61128688 Msa0339850:CDS
GATGGGCTCATTGGTTTGCC+AGG 0.472047 2_4:+61129199 Msa0339850:CDS
ATGTGTCATCTGGCATCAAT+GGG 0.472087 2_4:+61130045 Msa0339850:CDS
TGTAGTGATGGGTAGTGATC+AGG 0.472235 2_4:+61128588 Msa0339850:five_prime_UTR
AACCTGAACTTAATTTGTAT+AGG 0.474825 2_4:+61128762 Msa0339850:CDS
CATCTACGTTTCCAGCATCT+AGG 0.476061 2_4:-61131108 None:intergenic
TTCCCAAAATGCTGGTCCAC+AGG 0.476686 2_4:+61129866 Msa0339850:CDS
CCATTGAAATACAAGTTGTT+GGG 0.477564 2_4:-61130365 None:intergenic
TCCTCCTCCTTTGCTATCAA+AGG 0.479514 2_4:+61128979 Msa0339850:CDS
CAATTGGTGGAATTGGAGAT+AGG 0.481550 2_4:+61129044 Msa0339850:CDS
AGTGATTGGTGGTGGTAATG+AGG 0.481583 2_4:+61128661 Msa0339850:CDS
TCCATAATAACCATGATGGT+TGG 0.484051 2_4:-61130924 None:intergenic
GCATCTCATTTACAAGCAAT+AGG 0.484300 2_4:-61132904 None:intergenic
TCCCCTTATAGTGGTGGAGG+TGG 0.486724 2_4:+61130398 Msa0339850:CDS
GCACCATGGCACCTAGATGC+TGG 0.486752 2_4:+61131097 Msa0339850:CDS
AAAATGGTTCAAGAGCTTGA+TGG 0.487490 2_4:+61131778 Msa0339850:CDS
GGCTCCCCTTATAGTGGTGG+AGG 0.487949 2_4:+61130395 Msa0339850:CDS
AACATGGCCATAAAGCTTGT+TGG 0.488641 2_4:-61131580 None:intergenic
GACTCAAGAATTCTTGGAGG+TGG 0.489951 2_4:+61130605 Msa0339850:CDS
TTCATCAAATGCGTTACGAC+TGG 0.490413 2_4:-61129736 None:intergenic
AGCTATGGCGTCCCCTGGAA+TGG 0.495376 2_4:+61130583 Msa0339850:CDS
AACGAACCCTCCACAGTTGG+AGG 0.496406 2_4:-61128797 None:intergenic
GCATCAGCTATGGCGTCCCC+TGG 0.501319 2_4:+61130578 Msa0339850:CDS
ACACTATCAACCCATCCATA+TGG 0.502240 2_4:+61131919 Msa0339850:CDS
TTGCTTGTAAATGAGATGCT+TGG 0.503439 2_4:+61132908 Msa0339850:CDS
TTGAGGGTTAAGTGTAGTGA+TGG 0.504750 2_4:+61128576 Msa0339850:five_prime_UTR
TGCTAATTATGTTGTACAGA+AGG 0.505438 2_4:+61133419 Msa0339850:CDS
AAGTTGTGCAGCAGCATACT+CGG 0.508196 2_4:-61130753 None:intergenic
GTGGATAAAGAGTTTGCCAT+TGG 0.508321 2_4:-61130986 None:intergenic
CGATGTCTTTGGTAATTATG+TGG 0.509063 2_4:+61131432 Msa0339850:CDS
TTGGCAGTGCTGATCAATAT+GGG 0.509849 2_4:+61131314 Msa0339850:intron
ATGTTGGCCCAGGATCAGTA+TGG 0.510536 2_4:+61132112 Msa0339850:CDS
TCAAATGCGTTACGACTGGC+TGG 0.512314 2_4:-61129732 None:intergenic
AACCCATCCATATGGTTGCC+GGG 0.512730 2_4:+61131927 Msa0339850:CDS
AAGTCCATCCTTGGATAGGC+AGG 0.513157 2_4:+61130316 Msa0339850:CDS
GATTTCCATAATAACCATGA+TGG 0.514134 2_4:-61130928 None:intergenic
AGGAGTAGTGCTTCGTGATA+GGG 0.514242 2_4:-61129925 None:intergenic
GCCCTCCCCTAAGTAGTATG+AGG 0.514678 2_4:-61133750 None:intergenic
TTATGTTGTACAGAAGGTGC+TGG 0.516780 2_4:+61133425 Msa0339850:CDS
GGAGCCCTGGCAACGTGTTG+TGG 0.516893 2_4:-61129951 None:intergenic
CGTTGCTGCAGCATCAGCTA+TGG 0.516905 2_4:+61130568 Msa0339850:CDS
AGCAAAGGAGGAGGAAGTCT+GGG 0.518907 2_4:-61128971 None:intergenic
GAGGTTCAGATGTGTGATTA+TGG 0.519278 2_4:+61133963 Msa0339850:three_prime_UTR
TCACAATACAATGTTCCATT+GGG 0.519367 2_4:+61130884 Msa0339850:CDS
CTATTTATCTCTGTCTGTGA+TGG 0.520233 2_4:+61133856 Msa0339850:three_prime_UTR
GGCGGAGCTTCTGCAATTGG+TGG 0.520880 2_4:+61129031 Msa0339850:CDS
AGATACATCGGATCAACATA+AGG 0.522156 2_4:-61130713 None:intergenic
AGCAGTTAGCATGTTGGCCC+AGG 0.522432 2_4:+61132102 Msa0339850:CDS
AAATGAAGAGAGTGATGAAA+AGG 0.523282 2_4:-61128250 None:intergenic
GTTGTTTGGAGGTGGTTCTA+CGG 0.523386 2_4:+61128835 Msa0339850:CDS
CTGGAATGAGGAATGTAGCT+GGG 0.523898 2_4:+61131068 Msa0339850:CDS
ATGCAAGGTGGTCAGGATCA+TGG 0.523936 2_4:+61130194 Msa0339850:CDS
ACAATCATCAAGGAATTAGC+AGG 0.524000 2_4:+61132800 Msa0339850:CDS
AGACATGAGAAGTCCATCCT+TGG 0.524846 2_4:+61130307 Msa0339850:CDS
TAAACATAACTCTTTGATGC+AGG 0.525614 2_4:-61133828 None:intergenic
CATTAGAGGCAAACTTCTGC+TGG 0.527514 2_4:-61132841 None:intergenic
ACATCAGACTCAACTTGTGA+TGG 0.528233 2_4:-61130143 None:intergenic
AGATTTGGATCAAATGTTCA+GGG 0.528775 2_4:+61129834 Msa0339850:CDS
GGAAATCCTGCATATGGTGT+TGG 0.529957 2_4:+61130944 Msa0339850:CDS
TCACCTGCTTCCCAAAATGC+TGG 0.529993 2_4:+61129858 Msa0339850:CDS
TAACAGCATGTGCTTGAGCA+TGG 0.531524 2_4:+61132758 Msa0339850:intron
ATCAGCTCCTCCAACTGTGG+AGG 0.531581 2_4:+61128790 Msa0339850:CDS
GTGCATGTTCTCAGTAGAAT+GGG 0.532346 2_4:+61130659 Msa0339850:CDS
GCCATGAAGGATGCCACAGC+AGG 0.534596 2_4:-61130503 None:intergenic
TCATTACCACCACCAATCAC+TGG 0.534723 2_4:-61128659 None:intergenic
AAGTAATTCCTGTCTACAGA+TGG 0.536090 2_4:-61130791 None:intergenic
GAGGAATGTAGCTGGGGTCA+TGG 0.537425 2_4:+61131075 Msa0339850:CDS
CATGACTCCTCAGCCACTGA+TGG 0.537467 2_4:+61129807 Msa0339850:CDS
GAGGGTTCGTTGAGTGCAGT+TGG 0.537596 2_4:+61128809 Msa0339850:CDS
TGGTAATTATGTGGTTCAGA+AGG 0.538547 2_4:+61131441 Msa0339850:CDS
GCCAGATCCAACTGGAGAAG+TGG 0.539436 2_4:-61131005 None:intergenic
GGTTCGTTGAGTGCAGTTGG+AGG 0.539621 2_4:+61128812 Msa0339850:CDS
TATTATGGAAATCCTGCATA+TGG 0.539931 2_4:+61130938 Msa0339850:CDS
TCAGCTCCTCCAACTGTGGA+GGG 0.541998 2_4:+61128791 Msa0339850:CDS
TCACCCGGCAACCATATGGA+TGG 0.544504 2_4:-61131930 None:intergenic
AATGAAGAGAGTGATGAAAA+GGG 0.544553 2_4:-61128249 None:intergenic
GACAAACCAACACCATATGC+AGG 0.544864 2_4:-61130950 None:intergenic
AATAACTATGGCCTGAGTGG+TGG 0.545392 2_4:+61130467 Msa0339850:CDS
TTTGGTCTATTTAGAACAAG+AGG 0.545574 2_4:-61128128 None:intergenic
TGGATCAGCTCCTCCAACTG+TGG 0.546148 2_4:+61128787 Msa0339850:CDS
CTCAACGAACCCTCCACAGT+TGG 0.546176 2_4:-61128800 None:intergenic
ATAAAATGACCATACAATCA+AGG 0.547474 2_4:+61134013 Msa0339850:three_prime_UTR
GAACTTAATTTGTATAGGAG+TGG 0.547786 2_4:+61128767 Msa0339850:CDS
TCCTCCTTTGCTATCAAAGG+AGG 0.548140 2_4:+61128982 Msa0339850:CDS
GTAGAGAAACTTGTTGCTGC+CGG 0.549361 2_4:+61133549 Msa0339850:CDS
AATTAGAACCATCTGAAGGC+TGG 0.549671 2_4:-61130436 None:intergenic
TTGTATTTCAATGGATCACC+TGG 0.550910 2_4:+61130374 Msa0339850:CDS
AAAGAATTAGTTCACGCTGT+TGG 0.551100 2_4:-61133461 None:intergenic
TCTGAAGGCTGGTATTGTGC+AGG 0.551183 2_4:-61130425 None:intergenic
CACTTCTCTTACCTGAATCA+GGG 0.551927 2_4:-61130274 None:intergenic
CATCAGTGGCTGAGGAGTCA+TGG 0.552200 2_4:-61129806 None:intergenic
TCCGGTGGTTCCAACCATCA+TGG 0.552410 2_4:+61130914 Msa0339850:CDS
AACAGCATGTGCTTGAGCAT+GGG 0.553226 2_4:+61132759 Msa0339850:intron
GCATATTACCAGTTCCAAGT+TGG 0.553748 2_4:-61130529 None:intergenic
GGATGTTGCTTCGCGATCAA+CGG 0.556585 2_4:+61128717 Msa0339850:CDS
CCTGGCTCCCCTTATAGTGG+TGG 0.559535 2_4:+61130392 Msa0339850:CDS
TTAACGACCCATCTGTAGAC+AGG 0.559842 2_4:+61130783 Msa0339850:CDS
GTTCGTTGAGTGCAGTTGGA+GGG 0.560309 2_4:+61128813 Msa0339850:CDS
GTCTTAAAAGAACGAAATTG+AGG 0.561210 2_4:-61128287 None:intergenic
TCTCAAACCATCAGTGGCTG+AGG 0.561369 2_4:-61129814 None:intergenic
GTGATTGGTGGTGGTAATGA+GGG 0.561511 2_4:+61128662 Msa0339850:CDS
CTCCCACTACCAATAGGTGT+GGG 0.562683 2_4:-61129984 None:intergenic
AAATGAGATGCTTGGAACTA+CGG 0.563713 2_4:+61132916 Msa0339850:CDS
CTGAGAACATGCACATCAGA+TGG 0.563732 2_4:-61130650 None:intergenic
ATAACTATGGCCTGAGTGGT+GGG 0.564056 2_4:+61130468 Msa0339850:CDS
GGACATAACACCTCTGTCAC+AGG 0.565032 2_4:+61129696 Msa0339850:CDS
GTGCTGATCAATATGGGAGC+CGG 0.565045 2_4:+61131320 Msa0339850:intron
TTTAGGAGCAGTTAGCATGT+TGG 0.565823 2_4:+61132096 Msa0339850:CDS
TCTGGAATGAGGAATGTAGC+TGG 0.565866 2_4:+61131067 Msa0339850:CDS
GAAAAGAGAGACTGAGGCGG+TGG 0.566351 2_4:+61129138 Msa0339850:CDS
CCACCACTATAAGGGGAGCC+AGG 0.569309 2_4:-61130392 None:intergenic
GTATGGCAACTATGTCGTCC+AGG 0.569382 2_4:+61132129 Msa0339850:CDS
TGTGCATGTTCTCAGTAGAA+TGG 0.570940 2_4:+61130658 Msa0339850:CDS
TCGCGATCAACGGCGTCGTG+AGG 0.571067 2_4:+61128727 Msa0339850:CDS
CAATCCTCCTTTGATAGCAA+AGG 0.571405 2_4:-61128986 None:intergenic
TGAGAAGTCCATCCTTGGAT+AGG 0.574938 2_4:+61130312 Msa0339850:CDS
TCCTTTGATAGCAAAGGAGG+AGG 0.575676 2_4:-61128980 None:intergenic
AATATAAGCTTGTAGAATTG+GGG 0.577633 2_4:-61134188 None:intergenic
ACAAGCAATAGGCGTTCAGA+AGG 0.579596 2_4:-61132893 None:intergenic
TCCTCATACTACTTAGGGGA+GGG 0.579765 2_4:+61133749 Msa0339850:exon
CAATACACTTCTGAATGACA+TGG 0.580271 2_4:-61131837 None:intergenic
GGTAGAAGGCCAGTGATTGG+TGG 0.580326 2_4:+61128650 Msa0339850:CDS
CACCCGGCAACCATATGGAT+GGG 0.580941 2_4:-61131929 None:intergenic
AGAAGGCCAGTGATTGGTGG+TGG 0.581232 2_4:+61128653 Msa0339850:CDS
TTCAGCTCGTAGCGTTGATG+GGG 0.581724 2_4:+61128412 Msa0339850:five_prime_UTR
ATGGGTAGAAGGCCAGTGAT+TGG 0.582847 2_4:+61128647 Msa0339850:CDS
TTGATGCCAGATGACACATC+AGG 0.584302 2_4:-61130041 None:intergenic
GCAGCACGCATATTTAAAGA+AGG 0.585048 2_4:+61130220 Msa0339850:CDS
AGTGATTGTGCAGGATGACA+TGG 0.586726 2_4:+61129674 Msa0339850:intron
CATCAGACTCAACTTGTGAT+GGG 0.588044 2_4:-61130142 None:intergenic
AGCCAGCTCTGCTTCTGCAG+AGG 0.588814 2_4:-61129775 None:intergenic
TTAGTCCCAAGACCTAGTCC+TGG 0.589038 2_4:-61129217 None:intergenic
GTTAATGGAGCTGATGAGAA+TGG 0.589456 2_4:+61129073 Msa0339850:CDS
CCTGATTCAGGTAAGAGAAG+TGG 0.589484 2_4:+61130275 Msa0339850:CDS
TGATCCACAACACGTTGCCA+GGG 0.590112 2_4:+61129947 Msa0339850:CDS
GCCAGATGACACATCAGGAC+TGG 0.591356 2_4:-61130036 None:intergenic
ATGGACTCAAGAATTCTTGG+AGG 0.591427 2_4:+61130602 Msa0339850:CDS
TTACGACTGGCTGGACGAGA+CGG 0.591574 2_4:-61129723 None:intergenic
GATGGAGAAGCAACTCCAGA+GGG 0.593235 2_4:-61130632 None:intergenic
ACCACCTCCACCACTATAAG+GGG 0.593482 2_4:-61130399 None:intergenic
TGGAATTGGAGATAGGAGGA+AGG 0.594744 2_4:+61129051 Msa0339850:CDS
GTCTTATCCAGGAAGTCCAA+TGG 0.595595 2_4:+61130970 Msa0339850:CDS
CAGGTAAGAGAAGTGGAAGC+GGG 0.596220 2_4:+61130282 Msa0339850:CDS
TCAGGTAAGAGAAGTGGAAG+CGG 0.597387 2_4:+61130281 Msa0339850:CDS
TCTCCCACTACCAATAGGTG+TGG 0.597479 2_4:-61129985 None:intergenic
ATGCTCGACCTGCCTATCCA+AGG 0.598500 2_4:-61130324 None:intergenic
TGAGCGTTCTACAATCATCA+AGG 0.599538 2_4:+61132790 Msa0339850:CDS
CCATTGGGTGGTAAATCCGG+TGG 0.599569 2_4:+61130899 Msa0339850:CDS
AAACTAGAGGTTCTGCTGAG+TGG 0.599602 2_4:+61129170 Msa0339850:CDS
GAATTCTTGAGTCCATTCCA+GGG 0.599791 2_4:-61130595 None:intergenic
TGATGCAGGAGAACAAAGGA+GGG 0.600679 2_4:-61133814 None:intergenic
GCACAATACCAGCCTTCAGA+TGG 0.601016 2_4:+61130428 Msa0339850:CDS
ATAGTTGCCATACTGATCCT+GGG 0.602776 2_4:-61132119 None:intergenic
GAAGTTTGCCTCTAATGTTG+TGG 0.602808 2_4:+61132847 Msa0339850:CDS
TCCTCCTTTGATAGCAAAGG+AGG 0.602969 2_4:-61128983 None:intergenic
TTTCCAGCATCTAGGTGCCA+TGG 0.603193 2_4:-61131100 None:intergenic
AGTTGTGCAGCAGCATACTC+GGG 0.603765 2_4:-61130752 None:intergenic
GCCCCACACCTATTGGTAGT+GGG 0.605163 2_4:+61129982 Msa0339850:CDS
ACACCTCTGATGTCCCTGCA+TGG 0.605486 2_4:+61133987 Msa0339850:three_prime_UTR
GTCATCAAAGCAAGAGCATG+TGG 0.606191 2_4:-61131409 None:intergenic
GAAGGCTAAGTGTCAGAACA+TGG 0.607532 2_4:-61131596 None:intergenic
AGTAATTCCTGTCTACAGAT+GGG 0.607600 2_4:-61130790 None:intergenic
AGACGGAAAGCCTGTGACAG+AGG 0.609185 2_4:-61129706 None:intergenic
GATGAAAGCGATGAAATTGG+CGG 0.610380 2_4:-61128190 None:intergenic
CCACCGGATTTACCACCCAA+TGG 0.610480 2_4:-61130899 None:intergenic
GTTGTTGCTGCTGAGAAGAG+AGG 0.610481 2_4:+61130008 Msa0339850:CDS
CGCTGTGTACGAGATCAGAA+TGG 0.610763 2_4:+61131811 Msa0339850:CDS
TTCCAGCATACCCACCACTC+AGG 0.611254 2_4:-61130478 None:intergenic
CGATGTATCTTCAGTACATG+AGG 0.611331 2_4:+61130726 Msa0339850:CDS
TTGATGCAGGAGAACAAAGG+AGG 0.613025 2_4:-61133815 None:intergenic
GAGAAACTTGTTGCTGCCGG+AGG 0.618103 2_4:+61133552 Msa0339850:CDS
CAATACAATGTTCCATTGGG+TGG 0.619426 2_4:+61130887 Msa0339850:CDS
TTTAATAACTATGGCCTGAG+TGG 0.620041 2_4:+61130464 Msa0339850:CDS
ATAGACCAAAACCCTAATAG+GGG 0.621279 2_4:+61128141 Msa0339850:five_prime_UTR
TAATAATATTGAAGATACGC+AGG 0.625157 2_4:-61128929 None:intergenic
TTGGTGGAATTGGAGATAGG+AGG 0.626161 2_4:+61129047 Msa0339850:CDS
CTCATGTACTGAAGATACAT+CGG 0.626468 2_4:-61130725 None:intergenic
AGAGGTTCTGCTGAGTGGGG+TGG 0.628016 2_4:+61129175 Msa0339850:CDS
CAATAGGAAAAGAGAGACTG+AGG 0.630432 2_4:+61129132 Msa0339850:CDS
GTATGCTGGAAATCCTGCTG+TGG 0.630526 2_4:+61130490 Msa0339850:CDS
TGAGGGTTAAGTGTAGTGAT+GGG 0.631047 2_4:+61128577 Msa0339850:five_prime_UTR
TCCAAATCTCAAACCATCAG+TGG 0.631617 2_4:-61129820 None:intergenic
GCGTTCAGAAGGACCTCCAA+AGG 0.633901 2_4:-61132882 None:intergenic
AAAGGAAAAGAAACCTGAAG+AGG 0.634760 2_4:-61132950 None:intergenic
GGTGAATTAGAACCATCTGA+AGG 0.639525 2_4:-61130440 None:intergenic
CACATAATTACCAAAGACAT+CGG 0.640601 2_4:-61131431 None:intergenic
CTTCCATGCAGGGACATCAG+AGG 0.640701 2_4:-61133990 None:intergenic
ATGATTGTAGAACGCTCATG+AGG 0.641163 2_4:-61132785 None:intergenic
TGGAATGAGGAATGTAGCTG+GGG 0.642831 2_4:+61131069 Msa0339850:CDS
AATGGAGCTGATGAGAATGG+TGG 0.643341 2_4:+61129076 Msa0339850:CDS
CTACCAATAGGTGTGGGGCA+AGG 0.645705 2_4:-61129978 None:intergenic
GCATAAGAATATGAAGCCTG+TGG 0.652845 2_4:-61129882 None:intergenic
TCTGTAGACAGGAATTACTT+GGG 0.655499 2_4:+61130794 Msa0339850:CDS
CGGTGTTTGCTACACCTCCG+GGG 0.655610 2_4:+61129104 Msa0339850:CDS
CTCCTCATACTACTTAGGGG+AGG 0.656672 2_4:+61133748 Msa0339850:exon
TCGACCTGCCTATCCAAGGA+TGG 0.658687 2_4:-61130320 None:intergenic
AGCGACAATATGTTTCCCAT+AGG 0.660900 2_4:-61133523 None:intergenic
TAGCTGGGGTCATGGCACCA+TGG 0.661015 2_4:+61131083 Msa0339850:CDS
TTCCTATTGTTAAACCCCGG+AGG 0.662875 2_4:-61129118 None:intergenic
ACTAGAGGTTCTGCTGAGTG+GGG 0.663357 2_4:+61129172 Msa0339850:CDS
AATTCTTGAGTCCATTCCAG+GGG 0.665267 2_4:-61130594 None:intergenic
CTGTACAAAATGTTGCTATG+TGG 0.666597 2_4:+61134095 Msa0339850:three_prime_UTR
GTGGCTGATGAGAAAACTAG+AGG 0.667175 2_4:+61129157 Msa0339850:CDS
TCCCACTACCAATAGGTGTG+GGG 0.673011 2_4:-61129983 None:intergenic
GATGCAGGAGAACAAAGGAG+GGG 0.674550 2_4:-61133813 None:intergenic
ATGGGAAATCAAATTGCAGG+TGG 0.674760 2_4:+61130677 Msa0339850:CDS
AGATGGAGAAGCAACTCCAG+AGG 0.676390 2_4:-61130633 None:intergenic
TGTGATGGATAGTAGCCGAT+TGG 0.681445 2_4:+61133871 Msa0339850:three_prime_UTR
TCTTTGATGCAGGAGAACAA+AGG 0.691435 2_4:-61133818 None:intergenic
ACATCTTTACCTGTATCACC+CGG 0.691610 2_4:-61131945 None:intergenic
GTTGTCTGTACAGCTAACTG+AGG 0.697737 2_4:+61133780 Msa0339850:three_prime_UTR
TGATGAGAATGGTGGAAGAG+CGG 0.704265 2_4:+61129084 Msa0339850:CDS
TGGTTGTCGAGTCATCCAGA+AGG 0.705947 2_4:+61131626 Msa0339850:CDS
ACATTGTATTGTGACTTCTG+AGG 0.707222 2_4:-61130875 None:intergenic
GTGATTGTGCAGGATGACAT+GGG 0.717630 2_4:+61129675 Msa0339850:intron
AGTCTCCTCATACTACTTAG+GGG 0.720809 2_4:+61133745 Msa0339850:CDS
TAGGAAAAGAGAGACTGAGG+CGG 0.753953 2_4:+61129135 Msa0339850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATGATTAATTTTTGTTAA+GGG + chr2_4:61128466-61128485 Msa0339850:five_prime_UTR 10.0%
!!! TTAATATAATTTTCTCTTAT+TGG + chr2_4:61131295-61131314 Msa0339850:intron 10.0%
!!! TTTTTTATTTCTATATCTTT+AGG + chr2_4:61131723-61131742 Msa0339850:intron 10.0%
!!! GATATGATTAATTTTTGTTA+AGG + chr2_4:61128465-61128484 Msa0339850:five_prime_UTR 15.0%
!! CTGAATAAATTTAATTGATT+TGG + chr2_4:61129417-61129436 Msa0339850:intron 15.0%
!!! AATTATCAAAGATATCTTTT+TGG + chr2_4:61130170-61130189 Msa0339850:CDS 15.0%
!! AAGATCTAAATATTTATGAA+TGG - chr2_4:61131493-61131512 None:intergenic 15.0%
!! AAACTAATCATTTAATATTG+TGG - chr2_4:61132475-61132494 None:intergenic 15.0%
!!! AGTTTTTAGATTTTGTTTTA+TGG + chr2_4:61132490-61132509 Msa0339850:intron 15.0%
!!! GTTTTTAGATTTTGTTTTAT+GGG + chr2_4:61132491-61132510 Msa0339850:intron 15.0%
!! AAATTATTAACAGCTATTAA+AGG - chr2_4:61132971-61132990 None:intergenic 15.0%
!! AAATTGAGGTGATAAATTAT+GGG - chr2_4:61128276-61128295 None:intergenic 20.0%
!! AAAAAAAATGTTGTCTGATA+TGG + chr2_4:61128628-61128647 Msa0339850:exon 20.0%
!! AAAAAAATGTTGTCTGATAT+GGG + chr2_4:61128629-61128648 Msa0339850:exon 20.0%
!! ATGAATTTGAAAAGGAAATA+GGG + chr2_4:61128696-61128715 Msa0339850:CDS 20.0%
!!! AAATTTATTCAGTTTGTTAG+TGG - chr2_4:61129409-61129428 None:intergenic 20.0%
!!! TTCCTAAAAATCCTATATTT+TGG + chr2_4:61129466-61129485 Msa0339850:intron 20.0%
!! AATTCACCATTTAATAACTA+TGG + chr2_4:61130455-61130474 Msa0339850:CDS 20.0%
!! GTTATGAATTATTATAAACC+TGG - chr2_4:61132150-61132169 None:intergenic 20.0%
!!! AACATATTATTTTAAGTCCT+CGG - chr2_4:61133110-61133129 None:intergenic 20.0%
!!! GCGATTTTTTTTTTTTTTGA+AGG - chr2_4:61133274-61133293 None:intergenic 20.0%
!!! TTATACATAGATTTTAAGAG+AGG + chr2_4:61133939-61133958 Msa0339850:three_prime_UTR 20.0%
!! GTTGTAAAGTTTCATAAAAA+CGG + chr2_4:61134047-61134066 Msa0339850:three_prime_UTR 20.0%
!! AAATATAAGCTTGTAGAATT+GGG - chr2_4:61134192-61134211 None:intergenic 20.0%
!!! ATGAAAAGGGTGAAATTTTT+TGG - chr2_4:61128239-61128258 None:intergenic 25.0%
! GAAATTGAGGTGATAAATTA+TGG - chr2_4:61128277-61128296 None:intergenic 25.0%
! CAATTTCATATCAGCAATTA+TGG + chr2_4:61128324-61128343 Msa0339850:five_prime_UTR 25.0%
! TTCAGAATCAATCATCAAAA+AGG - chr2_4:61128381-61128400 None:intergenic 25.0%
!!! TGATAAAAGTTTCCGTTTTT+AGG + chr2_4:61128542-61128561 Msa0339850:five_prime_UTR 25.0%
!!! TCCGTTTTTAGGTTATTTAA+CGG + chr2_4:61128553-61128572 Msa0339850:five_prime_UTR 25.0%
! ACCGTTAAATAACCTAAAAA+CGG - chr2_4:61128557-61128576 None:intergenic 25.0%
! GATGAATTTGAAAAGGAAAT+AGG + chr2_4:61128695-61128714 Msa0339850:CDS 25.0%
!!! AACCTGAACTTAATTTGTAT+AGG + chr2_4:61128762-61128781 Msa0339850:CDS 25.0%
! TAATAATATTGAAGATACGC+AGG - chr2_4:61128932-61128951 None:intergenic 25.0%
!! TGCCAAAATATAGGATTTTT+AGG - chr2_4:61129471-61129490 None:intergenic 25.0%
!! TTATGTGCATATGTTGATAA+TGG + chr2_4:61129521-61129540 Msa0339850:intron 25.0%
! AGAAAAGAATATGGTTTATC+AGG + chr2_4:61131378-61131397 Msa0339850:CDS 25.0%
! TTATTACTCTGTCTCTATAT+TGG + chr2_4:61131467-61131486 Msa0339850:intron 25.0%
! ATAAAATCAATTGCATCTTC+AGG - chr2_4:61131871-61131890 None:intergenic 25.0%
!!! TGTAATACGTTTTATTTGCA+TGG + chr2_4:61132014-61132033 Msa0339850:intron 25.0%
!! AAAGTTATGGATGAGATTTT+AGG + chr2_4:61132079-61132098 Msa0339850:CDS 25.0%
!! ACAAAGCATTATGATTGTTA+GGG - chr2_4:61132227-61132246 None:intergenic 25.0%
!! TTGTGAAGTTTTCTTCATTA+TGG + chr2_4:61132243-61132262 Msa0339850:intron 25.0%
! AGTGAAGCAAATCAATAAAA+CGG - chr2_4:61132377-61132396 None:intergenic 25.0%
! AGTAAATATGACACGATAAA+AGG - chr2_4:61132696-61132715 None:intergenic 25.0%
! TGTTCAAACGTTAAATTACA+TGG - chr2_4:61133224-61133243 None:intergenic 25.0%
! AATTTAACGTTTGAACAGAA+TGG + chr2_4:61133227-61133246 Msa0339850:intron 25.0%
!! AATTTTGTCAAAACATACTG+AGG - chr2_4:61133325-61133344 None:intergenic 25.0%
! AAAATAAGTATAAGTACCTC+CGG - chr2_4:61133571-61133590 None:intergenic 25.0%
!! CCGATAATTTTATTACCAAT+CGG - chr2_4:61133889-61133908 None:intergenic 25.0%
!! CCGATTGGTAATAAAATTAT+CGG + chr2_4:61133886-61133905 Msa0339850:three_prime_UTR 25.0%
! ATAAAATGACCATACAATCA+AGG + chr2_4:61134013-61134032 Msa0339850:three_prime_UTR 25.0%
! AATATAAGCTTGTAGAATTG+GGG - chr2_4:61134191-61134210 None:intergenic 25.0%
! CAAATATAAGCTTGTAGAAT+TGG - chr2_4:61134193-61134212 None:intergenic 25.0%
! TTTGGTCTATTTAGAACAAG+AGG - chr2_4:61128131-61128150 None:intergenic 30.0%
AAATAGACCAAAACCCTAAT+AGG + chr2_4:61128139-61128158 Msa0339850:five_prime_UTR 30.0%
AATAGACCAAAACCCTAATA+GGG + chr2_4:61128140-61128159 Msa0339850:five_prime_UTR 30.0%
AATGAAGAGAGTGATGAAAA+GGG - chr2_4:61128252-61128271 None:intergenic 30.0%
AAATGAAGAGAGTGATGAAA+AGG - chr2_4:61128253-61128272 None:intergenic 30.0%
GTCTTAAAAGAACGAAATTG+AGG - chr2_4:61128290-61128309 None:intergenic 30.0%
! TGCTTTTGATGCTGTAAATA+TGG + chr2_4:61128503-61128522 Msa0339850:five_prime_UTR 30.0%
! GCTTTTGATGCTGTAAATAT+GGG + chr2_4:61128504-61128523 Msa0339850:five_prime_UTR 30.0%
! CTTTTGATGCTGTAAATATG+GGG + chr2_4:61128505-61128524 Msa0339850:five_prime_UTR 30.0%
! TTTAGGTTATTTAACGGTTG+AGG + chr2_4:61128559-61128578 Msa0339850:five_prime_UTR 30.0%
TTAGGTTATTTAACGGTTGA+GGG + chr2_4:61128560-61128579 Msa0339850:five_prime_UTR 30.0%
GTTTGGAGATGAATTTGAAA+AGG + chr2_4:61128688-61128707 Msa0339850:CDS 30.0%
CTCCTATACAAATTAAGTTC+AGG - chr2_4:61128767-61128786 None:intergenic 30.0%
!! GAACTTAATTTGTATAGGAG+TGG + chr2_4:61128767-61128786 Msa0339850:CDS 30.0%
CAAAAGTGACATAAAATCCA+GGG - chr2_4:61129313-61129332 None:intergenic 30.0%
ACAAAAGTGACATAAAATCC+AGG - chr2_4:61129314-61129333 None:intergenic 30.0%
!! TTAATTGATTTGGCTGTGTA+TGG + chr2_4:61129427-61129446 Msa0339850:intron 30.0%
!! TAATTGATTTGGCTGTGTAT+GGG + chr2_4:61129428-61129447 Msa0339850:intron 30.0%
TTACAAGTGTGCCAAAATAT+AGG - chr2_4:61129480-61129499 None:intergenic 30.0%
AGATTTGGATCAAATGTTCA+GGG + chr2_4:61129834-61129853 Msa0339850:CDS 30.0%
!! AGATATCTTTTTGGTATGCA+AGG + chr2_4:61130179-61130198 Msa0339850:CDS 30.0%
TATTTAAAGAAGGCTGAATC+AGG + chr2_4:61130230-61130249 Msa0339850:CDS 30.0%
CCATTGAAATACAAGTTGTT+GGG - chr2_4:61130368-61130387 None:intergenic 30.0%
TCCATTGAAATACAAGTTGT+TGG - chr2_4:61130369-61130388 None:intergenic 30.0%
TCACAATACAATGTTCCATT+GGG + chr2_4:61130884-61130903 Msa0339850:CDS 30.0%
GATTTCCATAATAACCATGA+TGG - chr2_4:61130931-61130950 None:intergenic 30.0%
TATTATGGAAATCCTGCATA+TGG + chr2_4:61130938-61130957 Msa0339850:CDS 30.0%
!! TTTGAGCTTTCTGAAATTTC+TGG + chr2_4:61131184-61131203 Msa0339850:CDS 30.0%
! CAAGCTTTTGTTGAATAAAC+CGG - chr2_4:61131342-61131361 None:intergenic 30.0%
AACCACTGAAGAAAAGAATA+TGG + chr2_4:61131369-61131388 Msa0339850:CDS 30.0%
! AACCATATTCTTTTCTTCAG+TGG - chr2_4:61131374-61131393 None:intergenic 30.0%
CACATAATTACCAAAGACAT+CGG - chr2_4:61131434-61131453 None:intergenic 30.0%
TGAAAATTGACAATACCTTC+TGG - chr2_4:61131644-61131663 None:intergenic 30.0%
!! CTTGAACCATTTTAATCTTC+TGG - chr2_4:61131771-61131790 None:intergenic 30.0%
GATACAGGTAAAGATGTATT+CGG + chr2_4:61131951-61131970 Msa0339850:intron 30.0%
AATAAAACGTATTACAGCCA+AGG - chr2_4:61132010-61132029 None:intergenic 30.0%
!! TAACTTTTTGTTGTGTGTCA+GGG - chr2_4:61132066-61132085 None:intergenic 30.0%
!! ATAACTTTTTGTTGTGTGTC+AGG - chr2_4:61132067-61132086 None:intergenic 30.0%
TGACACACAACAAAAAGTTA+TGG + chr2_4:61132066-61132085 Msa0339850:CDS 30.0%
! CACTTTTAAATCAACAAGTC+TGG - chr2_4:61132201-61132220 None:intergenic 30.0%
!! CAGACTTGTTGATTTAAAAG+TGG + chr2_4:61132199-61132218 Msa0339850:intron 30.0%
! CACAAAGCATTATGATTGTT+AGG - chr2_4:61132228-61132247 None:intergenic 30.0%
TGAAGCAAATCAATAAAACG+GGG - chr2_4:61132375-61132394 None:intergenic 30.0%
GTGAAGCAAATCAATAAAAC+GGG - chr2_4:61132376-61132395 None:intergenic 30.0%
GATGGTGTACATCATAATAA+AGG - chr2_4:61132434-61132453 None:intergenic 30.0%
!! TTTTCAAGAGAGATTTCACA+GGG - chr2_4:61133187-61133206 None:intergenic 30.0%
!! ATTTTCAAGAGAGATTTCAC+AGG - chr2_4:61133188-61133207 None:intergenic 30.0%
TGCTAATTATGTTGTACAGA+AGG + chr2_4:61133419-61133438 Msa0339850:CDS 30.0%
! CATTGAAAAAGTACACCTAT+GGG + chr2_4:61133508-61133527 Msa0339850:CDS 30.0%
ATTAATGCATCATGTGTGTT+TGG + chr2_4:61133615-61133634 Msa0339850:intron 30.0%
TAAACATAACTCTTTGATGC+AGG - chr2_4:61133831-61133850 None:intergenic 30.0%
CCTTAAAAACCTTGATTGTA+TGG - chr2_4:61134025-61134044 None:intergenic 30.0%
! CCATACAATCAAGGTTTTTA+AGG + chr2_4:61134022-61134041 Msa0339850:three_prime_UTR 30.0%
!! TACAATCAAGGTTTTTAAGG+TGG + chr2_4:61134025-61134044 Msa0339850:three_prime_UTR 30.0%
AAAGTTTCATAAAAACGGTG+AGG + chr2_4:61134052-61134071 Msa0339850:three_prime_UTR 30.0%
CTGTGTCTATGTTTATTAGT+AGG + chr2_4:61134122-61134141 Msa0339850:three_prime_UTR 30.0%
ATAGACCAAAACCCTAATAG+GGG + chr2_4:61128141-61128160 Msa0339850:five_prime_UTR 35.0%
TACTAGAAGAACCCCTATTA+GGG - chr2_4:61128155-61128174 None:intergenic 35.0%
TTACTAGAAGAACCCCTATT+AGG - chr2_4:61128156-61128175 None:intergenic 35.0%
! GTTGATGAAAGCGATGAAAT+TGG - chr2_4:61128196-61128215 None:intergenic 35.0%
! CTTTTCCTATTGTTAAACCC+CGG - chr2_4:61129124-61129143 None:intergenic 35.0%
AAAATACTGCGAAAGAAGCA+AGG - chr2_4:61129274-61129293 None:intergenic 35.0%
TGACATAAAATCCAGGGAAA+AGG - chr2_4:61129307-61129326 None:intergenic 35.0%
CAGTGGAAGAAAAGATCAAA+CGG - chr2_4:61129340-61129359 None:intergenic 35.0%
! GTGCTCAAAAGATTTTACAG+TGG - chr2_4:61129357-61129376 None:intergenic 35.0%
!! TTGTTAGTGGTCTTGTTTGT+AGG - chr2_4:61129396-61129415 None:intergenic 35.0%
!! AATTGATTTGGCTGTGTATG+GGG + chr2_4:61129429-61129448 Msa0339850:intron 35.0%
AATTAAGCTGAACAGATGTG+AGG - chr2_4:61129593-61129612 None:intergenic 35.0%
GATGATCGCTAGAAGAAAAA+GGG - chr2_4:61129647-61129666 None:intergenic 35.0%
AGATGATCGCTAGAAGAAAA+AGG - chr2_4:61129648-61129667 None:intergenic 35.0%
TCTATAACAAGTGATTGTGC+AGG + chr2_4:61129665-61129684 Msa0339850:intron 35.0%
GAGATTTGGATCAAATGTTC+AGG + chr2_4:61129833-61129852 Msa0339850:CDS 35.0%
!! TATCTTTTTGGTATGCAAGG+TGG + chr2_4:61130182-61130201 Msa0339850:CDS 35.0%
CCCAACAACTTGTATTTCAA+TGG + chr2_4:61130365-61130384 Msa0339850:CDS 35.0%
TTGTATTTCAATGGATCACC+TGG + chr2_4:61130374-61130393 Msa0339850:CDS 35.0%
CTCAGGCCATAGTTATTAAA+TGG - chr2_4:61130464-61130483 None:intergenic 35.0%
TTTAATAACTATGGCCTGAG+TGG + chr2_4:61130464-61130483 Msa0339850:CDS 35.0%
AGAATGGGAAATCAAATTGC+AGG + chr2_4:61130674-61130693 Msa0339850:CDS 35.0%
AGATACATCGGATCAACATA+AGG - chr2_4:61130716-61130735 None:intergenic 35.0%
CTCATGTACTGAAGATACAT+CGG - chr2_4:61130728-61130747 None:intergenic 35.0%
AGTAATTCCTGTCTACAGAT+GGG - chr2_4:61130793-61130812 None:intergenic 35.0%
AAGTAATTCCTGTCTACAGA+TGG - chr2_4:61130794-61130813 None:intergenic 35.0%
ATCTGTAGACAGGAATTACT+TGG + chr2_4:61130793-61130812 Msa0339850:CDS 35.0%
TCTGTAGACAGGAATTACTT+GGG + chr2_4:61130794-61130813 Msa0339850:CDS 35.0%
ACATTGTATTGTGACTTCTG+AGG - chr2_4:61130878-61130897 None:intergenic 35.0%
GTCACAATACAATGTTCCAT+TGG + chr2_4:61130883-61130902 Msa0339850:CDS 35.0%
TCCAACCATCATGGTTATTA+TGG + chr2_4:61130923-61130942 Msa0339850:CDS 35.0%
TCCATAATAACCATGATGGT+TGG - chr2_4:61130927-61130946 None:intergenic 35.0%
CAGAAGCAAAATGCATATTC+AGG - chr2_4:61131051-61131070 None:intergenic 35.0%
! CTGAATATGCATTTTGCTTC+TGG + chr2_4:61131049-61131068 Msa0339850:CDS 35.0%
! AAATTTTGCTTCGTCTCTGT+TGG + chr2_4:61131132-61131151 Msa0339850:CDS 35.0%
! AGGTATACCTTTTTATAGCG+TGG + chr2_4:61131223-61131242 Msa0339850:intron 35.0%
AACATCACCACGCTATAAAA+AGG - chr2_4:61131233-61131252 None:intergenic 35.0%
! CGATGTCTTTGGTAATTATG+TGG + chr2_4:61131432-61131451 Msa0339850:CDS 35.0%
TGGTAATTATGTGGTTCAGA+AGG + chr2_4:61131441-61131460 Msa0339850:CDS 35.0%
TTTGAGTGACAATTTGCATC+TGG + chr2_4:61131514-61131533 Msa0339850:intron 35.0%
! ACACTTAGCCTTCAAATGTA+TGG + chr2_4:61131606-61131625 Msa0339850:CDS 35.0%
TCTGGACCAGAAGATTAAAA+TGG + chr2_4:61131762-61131781 Msa0339850:CDS 35.0%
AAAATGGTTCAAGAGCTTGA+TGG + chr2_4:61131778-61131797 Msa0339850:CDS 35.0%
CAATACACTTCTGAATGACA+TGG - chr2_4:61131840-61131859 None:intergenic 35.0%
!! TTTGTGCACTTTAAAGTCCT+TGG + chr2_4:61131990-61132009 Msa0339850:intron 35.0%
!!! ATCTAGCTTTTCTGCACTTT+TGG + chr2_4:61132300-61132319 Msa0339850:intron 35.0%
! TGAGCATAAAGCATTAAGGA+TGG - chr2_4:61132606-61132625 None:intergenic 35.0%
! CGATTGAGCATAAAGCATTA+AGG - chr2_4:61132610-61132629 None:intergenic 35.0%
CTAGAAGTTTGGATCACAAA+CGG - chr2_4:61132641-61132660 None:intergenic 35.0%
!! CAAAAGGACAAAGTATTGGA+TGG - chr2_4:61132672-61132691 None:intergenic 35.0%
AGGACAAAAGGACAAAGTAT+TGG - chr2_4:61132676-61132695 None:intergenic 35.0%
TGACACGATAAAAGGACAAA+AGG - chr2_4:61132688-61132707 None:intergenic 35.0%
! ATGCTGTTATTTACAAGGAG+TGG - chr2_4:61132747-61132766 None:intergenic 35.0%
! AGCACATGCTGTTATTTACA+AGG - chr2_4:61132752-61132771 None:intergenic 35.0%
ACAATCATCAAGGAATTAGC+AGG + chr2_4:61132800-61132819 Msa0339850:CDS 35.0%
GCATCTCATTTACAAGCAAT+AGG - chr2_4:61132907-61132926 None:intergenic 35.0%
TTGCTTGTAAATGAGATGCT+TGG + chr2_4:61132908-61132927 Msa0339850:CDS 35.0%
AAATGAGATGCTTGGAACTA+CGG + chr2_4:61132916-61132935 Msa0339850:CDS 35.0%
AAAGGAAAAGAAACCTGAAG+AGG - chr2_4:61132953-61132972 None:intergenic 35.0%
CTTCAACTAAGCAAAGCTAA+AGG - chr2_4:61132994-61133013 None:intergenic 35.0%
!! TTAGTTGAAGCTTGTTAAGC+TGG + chr2_4:61133004-61133023 Msa0339850:intron 35.0%
TAATCCAAGAGGCGAATATT+TGG + chr2_4:61133051-61133070 Msa0339850:intron 35.0%
!!! GTTTTAGCTAGCTTTAAGTG+TGG + chr2_4:61133131-61133150 Msa0339850:intron 35.0%
TCAATAACTTCAGCATCGTT+CGG - chr2_4:61133300-61133319 None:intergenic 35.0%
ATCATGTTCCTCTTATATGC+AGG + chr2_4:61133377-61133396 Msa0339850:intron 35.0%
AAAGAATTAGTTCACGCTGT+TGG - chr2_4:61133464-61133483 None:intergenic 35.0%
! GCATTGAAAAAGTACACCTA+TGG + chr2_4:61133507-61133526 Msa0339850:CDS 35.0%
AAAACTCAATAGAGCATGCA+TGG - chr2_4:61133665-61133684 None:intergenic 35.0%
CTATTTATCTCTGTCTGTGA+TGG + chr2_4:61133856-61133875 Msa0339850:three_prime_UTR 35.0%
!! CATAGATTTTAAGAGAGGTG+AGG + chr2_4:61133944-61133963 Msa0339850:three_prime_UTR 35.0%
!! GTCATTTTATCTTCCATGCA+GGG - chr2_4:61134003-61134022 None:intergenic 35.0%
CTGTACAAAATGTTGCTATG+TGG + chr2_4:61134095-61134114 Msa0339850:three_prime_UTR 35.0%
! AAGAACCCCTATTAGGGTTT+TGG - chr2_4:61128149-61128168 None:intergenic 40.0%
GATGAAAGCGATGAAATTGG+CGG - chr2_4:61128193-61128212 None:intergenic 40.0%
TTGAGGGTTAAGTGTAGTGA+TGG + chr2_4:61128576-61128595 Msa0339850:five_prime_UTR 40.0%
TGAGGGTTAAGTGTAGTGAT+GGG + chr2_4:61128577-61128596 Msa0339850:five_prime_UTR 40.0%
TGTTGTCTGATATGGGTAGA+AGG + chr2_4:61128636-61128655 Msa0339850:CDS 40.0%
! AAGTTTTCCGGGAATGGTTT+TGG + chr2_4:61128881-61128900 Msa0339850:CDS 40.0%
! CAATCCTCCTTTGATAGCAA+AGG - chr2_4:61128989-61129008 None:intergenic 40.0%
! CTTTGCTATCAAAGGAGGAT+TGG + chr2_4:61128987-61129006 Msa0339850:CDS 40.0%
! AGGTTTTCGCAGAGACTAAA+AGG + chr2_4:61129010-61129029 Msa0339850:CDS 40.0%
! TTTTCGCAGAGACTAAAAGG+CGG + chr2_4:61129013-61129032 Msa0339850:CDS 40.0%
CAATTGGTGGAATTGGAGAT+AGG + chr2_4:61129044-61129063 Msa0339850:CDS 40.0%
GTTAATGGAGCTGATGAGAA+TGG + chr2_4:61129073-61129092 Msa0339850:CDS 40.0%
CAATAGGAAAAGAGAGACTG+AGG + chr2_4:61129132-61129151 Msa0339850:CDS 40.0%
! GAGCCTTGCAGAAATTTTTC+AGG + chr2_4:61129246-61129265 Msa0339850:CDS 40.0%
GCACCTGAAAAATTTCTGCA+AGG - chr2_4:61129252-61129271 None:intergenic 40.0%
TTCATCAAATGCGTTACGAC+TGG - chr2_4:61129739-61129758 None:intergenic 40.0%
TCCAAATCTCAAACCATCAG+TGG - chr2_4:61129823-61129842 None:intergenic 40.0%
GCATAAGAATATGAAGCCTG+TGG - chr2_4:61129885-61129904 None:intergenic 40.0%
TATTCTTATGCTGCTGCACT+TGG + chr2_4:61129894-61129913 Msa0339850:CDS 40.0%
ATGTGTCATCTGGCATCAAT+GGG + chr2_4:61130045-61130064 Msa0339850:CDS 40.0%
GATATTGCATCTGCATTGTC+TGG + chr2_4:61130074-61130093 Msa0339850:CDS 40.0%
! ACTCAACTTGTGATGGGAAA+TGG - chr2_4:61130139-61130158 None:intergenic 40.0%
CATCAGACTCAACTTGTGAT+GGG - chr2_4:61130145-61130164 None:intergenic 40.0%
ACATCAGACTCAACTTGTGA+TGG - chr2_4:61130146-61130165 None:intergenic 40.0%
GCAGCACGCATATTTAAAGA+AGG + chr2_4:61130220-61130239 Msa0339850:CDS 40.0%
CACTTCTCTTACCTGAATCA+GGG - chr2_4:61130277-61130296 None:intergenic 40.0%
AATTAGAACCATCTGAAGGC+TGG - chr2_4:61130439-61130458 None:intergenic 40.0%
GGTGAATTAGAACCATCTGA+AGG - chr2_4:61130443-61130462 None:intergenic 40.0%
GCATATTACCAGTTCCAAGT+TGG - chr2_4:61130532-61130551 None:intergenic 40.0%
! TGCAGCAACGTTTTCAAACA+GGG - chr2_4:61130558-61130577 None:intergenic 40.0%
AATTCTTGAGTCCATTCCAG+GGG - chr2_4:61130597-61130616 None:intergenic 40.0%
GAATTCTTGAGTCCATTCCA+GGG - chr2_4:61130598-61130617 None:intergenic 40.0%
AGAATTCTTGAGTCCATTCC+AGG - chr2_4:61130599-61130618 None:intergenic 40.0%
! GGAATGGACTCAAGAATTCT+TGG + chr2_4:61130599-61130618 Msa0339850:CDS 40.0%
ATGGACTCAAGAATTCTTGG+AGG + chr2_4:61130602-61130621 Msa0339850:CDS 40.0%
TGTGCATGTTCTCAGTAGAA+TGG + chr2_4:61130658-61130677 Msa0339850:CDS 40.0%
GTGCATGTTCTCAGTAGAAT+GGG + chr2_4:61130659-61130678 Msa0339850:CDS 40.0%
ATGGGAAATCAAATTGCAGG+TGG + chr2_4:61130677-61130696 Msa0339850:CDS 40.0%
CGATGTATCTTCAGTACATG+AGG + chr2_4:61130726-61130745 Msa0339850:CDS 40.0%
! GAGCTTCAGAAAGCATATCT+TGG + chr2_4:61130839-61130858 Msa0339850:CDS 40.0%
CAATACAATGTTCCATTGGG+TGG + chr2_4:61130887-61130906 Msa0339850:CDS 40.0%
GTGGATAAAGAGTTTGCCAT+TGG - chr2_4:61130989-61131008 None:intergenic 40.0%
TCTTTATCCACTTCTCCAGT+TGG + chr2_4:61130998-61131017 Msa0339850:CDS 40.0%
TTCAGGTCATTGTGCCTAAT+AGG - chr2_4:61131034-61131053 None:intergenic 40.0%
!!! TGCATTTTGCTTCTGGAATG+AGG + chr2_4:61131056-61131075 Msa0339850:CDS 40.0%
CTGGTCATGTTGTTGAATTC+AGG + chr2_4:61131203-61131222 Msa0339850:CDS 40.0%
!! ATTGGCAGTGCTGATCAATA+TGG + chr2_4:61131313-61131332 Msa0339850:intron 40.0%
!! TTGGCAGTGCTGATCAATAT+GGG + chr2_4:61131314-61131333 Msa0339850:intron 40.0%
!!! ATCTGGCAGTTTTTTGAGCA+TGG + chr2_4:61131531-61131550 Msa0339850:intron 40.0%
GAGTTAGCCAACAAGCTTTA+TGG + chr2_4:61131573-61131592 Msa0339850:CDS 40.0%
AACATGGCCATAAAGCTTGT+TGG - chr2_4:61131583-61131602 None:intergenic 40.0%
CTCGACAACCATACATTTGA+AGG - chr2_4:61131617-61131636 None:intergenic 40.0%
GTCCAGATCAACAACTTCTA+TGG - chr2_4:61131749-61131768 None:intergenic 40.0%
ACACTATCAACCCATCCATA+TGG + chr2_4:61131919-61131938 Msa0339850:CDS 40.0%
ACATCTTTACCTGTATCACC+CGG - chr2_4:61131948-61131967 None:intergenic 40.0%
TTTAGGAGCAGTTAGCATGT+TGG + chr2_4:61132096-61132115 Msa0339850:CDS 40.0%
ATAGTTGCCATACTGATCCT+GGG - chr2_4:61132122-61132141 None:intergenic 40.0%
!! ACAGAGAGTACTGTATGTGA+TGG - chr2_4:61132452-61132471 None:intergenic 40.0%
TGGAGAAGCAACTAGAAGTT+TGG - chr2_4:61132652-61132671 None:intergenic 40.0%
ATGATTGTAGAACGCTCATG+AGG - chr2_4:61132788-61132807 None:intergenic 40.0%
TGAGCGTTCTACAATCATCA+AGG + chr2_4:61132790-61132809 Msa0339850:CDS 40.0%
GAAGTTTGCCTCTAATGTTG+TGG + chr2_4:61132847-61132866 Msa0339850:CDS 40.0%
ACACTTCTCCACAACATTAG+AGG - chr2_4:61132858-61132877 None:intergenic 40.0%
AAGCTGGATGTTGTCCAAAT+AGG + chr2_4:61133020-61133039 Msa0339850:intron 40.0%
AGCTGGATGTTGTCCAAATA+GGG + chr2_4:61133021-61133040 Msa0339850:intron 40.0%
GGATTATTGCAGACCCTATT+TGG - chr2_4:61133037-61133056 None:intergenic 40.0%
CAAACCAAATATTCGCCTCT+TGG - chr2_4:61133058-61133077 None:intergenic 40.0%
CATCATTGCCTGCATATAAG+AGG - chr2_4:61133388-61133407 None:intergenic 40.0%
! TTATGTTGTACAGAAGGTGC+TGG + chr2_4:61133425-61133444 Msa0339850:CDS 40.0%
AGCGACAATATGTTTCCCAT+AGG - chr2_4:61133526-61133545 None:intergenic 40.0%
!! ACGTGTAATTTGTTGCAGAG+AGG + chr2_4:61133709-61133728 Msa0339850:intron 40.0%
TCAGTCTCCTCATACTACTT+AGG + chr2_4:61133743-61133762 Msa0339850:CDS 40.0%
CAGTCTCCTCATACTACTTA+GGG + chr2_4:61133744-61133763 Msa0339850:CDS 40.0%
AGTCTCCTCATACTACTTAG+GGG + chr2_4:61133745-61133764 Msa0339850:CDS 40.0%
TCTTTGATGCAGGAGAACAA+AGG - chr2_4:61133821-61133840 None:intergenic 40.0%
GAGGTTCAGATGTGTGATTA+TGG + chr2_4:61133963-61133982 Msa0339850:three_prime_UTR 40.0%
!! GGTCATTTTATCTTCCATGC+AGG - chr2_4:61134004-61134023 None:intergenic 40.0%
!! TTTCAGCTCGTAGCGTTGAT+GGG + chr2_4:61128411-61128430 Msa0339850:five_prime_UTR 45.0%
!! TGTAGTGATGGGTAGTGATC+AGG + chr2_4:61128588-61128607 Msa0339850:five_prime_UTR 45.0%
TCATTACCACCACCAATCAC+TGG - chr2_4:61128662-61128681 None:intergenic 45.0%
!! AGTGATTGGTGGTGGTAATG+AGG + chr2_4:61128661-61128680 Msa0339850:CDS 45.0%
!! GTGATTGGTGGTGGTAATGA+GGG + chr2_4:61128662-61128681 Msa0339850:CDS 45.0%
! GTTGTTTGGAGGTGGTTCTA+CGG + chr2_4:61128835-61128854 Msa0339850:CDS 45.0%
! GCTGCAGTTTCGAAGTTTTC+CGG + chr2_4:61128869-61128888 Msa0339850:CDS 45.0%
! CTGCAGTTTCGAAGTTTTCC+GGG + chr2_4:61128870-61128889 Msa0339850:CDS 45.0%
! GTTTCGAAGTTTTCCGGGAA+TGG + chr2_4:61128875-61128894 Msa0339850:CDS 45.0%
CTCAGAACCAAAACCATTCC+CGG - chr2_4:61128891-61128910 None:intergenic 45.0%
!! TTGGTTCTGAGGAAGAGCTT+AGG + chr2_4:61128900-61128919 Msa0339850:CDS 45.0%
! TCCTCCTCCTTTGCTATCAA+AGG + chr2_4:61128979-61128998 Msa0339850:CDS 45.0%
! TCCTTTGATAGCAAAGGAGG+AGG - chr2_4:61128983-61129002 None:intergenic 45.0%
! TCCTCCTTTGCTATCAAAGG+AGG + chr2_4:61128982-61129001 Msa0339850:CDS 45.0%
! TCCTCCTTTGATAGCAAAGG+AGG - chr2_4:61128986-61129005 None:intergenic 45.0%
TGCTATCAAAGGAGGATTGG+AGG + chr2_4:61128990-61129009 Msa0339850:CDS 45.0%
GCTTCTGCAATTGGTGGAAT+TGG + chr2_4:61129037-61129056 Msa0339850:CDS 45.0%
TTGGTGGAATTGGAGATAGG+AGG + chr2_4:61129047-61129066 Msa0339850:CDS 45.0%
TGGAATTGGAGATAGGAGGA+AGG + chr2_4:61129051-61129070 Msa0339850:CDS 45.0%
GGAGATAGGAGGAAGGTTAA+TGG + chr2_4:61129058-61129077 Msa0339850:CDS 45.0%
AATGGAGCTGATGAGAATGG+TGG + chr2_4:61129076-61129095 Msa0339850:CDS 45.0%
! TGATGAGAATGGTGGAAGAG+CGG + chr2_4:61129084-61129103 Msa0339850:CDS 45.0%
TTCCTATTGTTAAACCCCGG+AGG - chr2_4:61129121-61129140 None:intergenic 45.0%
TAGGAAAAGAGAGACTGAGG+CGG + chr2_4:61129135-61129154 Msa0339850:CDS 45.0%
GTGGCTGATGAGAAAACTAG+AGG + chr2_4:61129157-61129176 Msa0339850:CDS 45.0%
AAACTAGAGGTTCTGCTGAG+TGG + chr2_4:61129170-61129189 Msa0339850:CDS 45.0%
AACTAGAGGTTCTGCTGAGT+GGG + chr2_4:61129171-61129190 Msa0339850:CDS 45.0%
! TGCATTCGTTTCCTTTTCCC+TGG + chr2_4:61129293-61129312 Msa0339850:intron 45.0%
TCGCTAGAAGAAAAAGGGTC+TGG - chr2_4:61129642-61129661 None:intergenic 45.0%
AGTGATTGTGCAGGATGACA+TGG + chr2_4:61129674-61129693 Msa0339850:intron 45.0%
GTGATTGTGCAGGATGACAT+GGG + chr2_4:61129675-61129694 Msa0339850:intron 45.0%
! GCCACTGATGGTTTGAGATT+TGG + chr2_4:61129819-61129838 Msa0339850:CDS 45.0%
AGGAGTAGTGCTTCGTGATA+GGG - chr2_4:61129928-61129947 None:intergenic 45.0%
ACAACTCTCCCACTACCAAT+AGG - chr2_4:61129993-61130012 None:intergenic 45.0%
TTGATGCCAGATGACACATC+AGG - chr2_4:61130044-61130063 None:intergenic 45.0%
GATGTGTCATCTGGCATCAA+TGG + chr2_4:61130044-61130063 Msa0339850:CDS 45.0%
TCAACAGATGACGTGCTAGA+AGG + chr2_4:61130107-61130126 Msa0339850:CDS 45.0%
! TTTTGGTATGCAAGGTGGTC+AGG + chr2_4:61130187-61130206 Msa0339850:CDS 45.0%
!! GAATCAGGGTGAGCTGTTTT+CGG - chr2_4:61130263-61130282 None:intergenic 45.0%
AAAACAGCTCACCCTGATTC+AGG + chr2_4:61130263-61130282 Msa0339850:CDS 45.0%
CCACTTCTCTTACCTGAATC+AGG - chr2_4:61130278-61130297 None:intergenic 45.0%
CCTGATTCAGGTAAGAGAAG+TGG + chr2_4:61130275-61130294 Msa0339850:CDS 45.0%
TCAGGTAAGAGAAGTGGAAG+CGG + chr2_4:61130281-61130300 Msa0339850:CDS 45.0%
AGACATGAGAAGTCCATCCT+TGG + chr2_4:61130307-61130326 Msa0339850:CDS 45.0%
TGAGAAGTCCATCCTTGGAT+AGG + chr2_4:61130312-61130331 Msa0339850:CDS 45.0%
AACCACCTCCACCACTATAA+GGG - chr2_4:61130403-61130422 None:intergenic 45.0%
AAACCACCTCCACCACTATA+AGG - chr2_4:61130404-61130423 None:intergenic 45.0%
AATAACTATGGCCTGAGTGG+TGG + chr2_4:61130467-61130486 Msa0339850:CDS 45.0%
ATAACTATGGCCTGAGTGGT+GGG + chr2_4:61130468-61130487 Msa0339850:CDS 45.0%
TCCTTCATGGCTAACCAACT+TGG + chr2_4:61130515-61130534 Msa0339850:CDS 45.0%
!! TCCAAGTTGGTTAGCCATGA+AGG - chr2_4:61130519-61130538 None:intergenic 45.0%
ATGGCTAACCAACTTGGAAC+TGG + chr2_4:61130521-61130540 Msa0339850:CDS 45.0%
! GCAGCAACGTTTTCAAACAG+GGG - chr2_4:61130557-61130576 None:intergenic 45.0%
! CTGCAGCAACGTTTTCAAAC+AGG - chr2_4:61130559-61130578 None:intergenic 45.0%
GACTCAAGAATTCTTGGAGG+TGG + chr2_4:61130605-61130624 Msa0339850:CDS 45.0%
CTGAGAACATGCACATCAGA+TGG - chr2_4:61130653-61130672 None:intergenic 45.0%
AAGTTGTGCAGCAGCATACT+CGG - chr2_4:61130756-61130775 None:intergenic 45.0%
TTAACGACCCATCTGTAGAC+AGG + chr2_4:61130783-61130802 Msa0339850:CDS 45.0%
GTTCCATTGGGTGGTAAATC+CGG + chr2_4:61130896-61130915 Msa0339850:CDS 45.0%
GGAAATCCTGCATATGGTGT+TGG + chr2_4:61130944-61130963 Msa0339850:CDS 45.0%
GACAAACCAACACCATATGC+AGG - chr2_4:61130953-61130972 None:intergenic 45.0%
!! GGTGTTGGTTTGTCTTATCC+AGG + chr2_4:61130959-61130978 Msa0339850:CDS 45.0%
GTCTTATCCAGGAAGTCCAA+TGG + chr2_4:61130970-61130989 Msa0339850:CDS 45.0%
TTGGATCTGGCAGTCCTATT+AGG + chr2_4:61131017-61131036 Msa0339850:CDS 45.0%
! TCTGGAATGAGGAATGTAGC+TGG + chr2_4:61131067-61131086 Msa0339850:CDS 45.0%
CTGGAATGAGGAATGTAGCT+GGG + chr2_4:61131068-61131087 Msa0339850:CDS 45.0%
TGGAATGAGGAATGTAGCTG+GGG + chr2_4:61131069-61131088 Msa0339850:CDS 45.0%
CATCTACGTTTCCAGCATCT+AGG - chr2_4:61131111-61131130 None:intergenic 45.0%
! ATAGCGTGGTGATGTTCTGA+TGG + chr2_4:61131237-61131256 Msa0339850:intron 45.0%
! GTCATCAAAGCAAGAGCATG+TGG - chr2_4:61131412-61131431 None:intergenic 45.0%
! GCTTTGATGACCGATGTCTT+TGG + chr2_4:61131421-61131440 Msa0339850:CDS 45.0%
GTTGGCTAACTCTCTTCTCT+GGG - chr2_4:61131565-61131584 None:intergenic 45.0%
! TGTTGGCTAACTCTCTTCTC+TGG - chr2_4:61131566-61131585 None:intergenic 45.0%
GAAGGCTAAGTGTCAGAACA+TGG - chr2_4:61131599-61131618 None:intergenic 45.0%
GGCCATAGAAGTTGTTGATC+TGG + chr2_4:61131744-61131763 Msa0339850:intron 45.0%
! ATTTGCATGGCAGAGAGTAC+TGG + chr2_4:61132027-61132046 Msa0339850:intron 45.0%
CATAGTTGCCATACTGATCC+TGG - chr2_4:61132123-61132142 None:intergenic 45.0%
TCAACAAGTCTGGCAAGCAA+TGG - chr2_4:61132191-61132210 None:intergenic 45.0%
! CGCTTCTCTTCGTGTTTTTC+TGG + chr2_4:61132342-61132361 Msa0339850:intron 45.0%
TAACAGCATGTGCTTGAGCA+TGG + chr2_4:61132758-61132777 Msa0339850:intron 45.0%
AACAGCATGTGCTTGAGCAT+GGG + chr2_4:61132759-61132778 Msa0339850:intron 45.0%
CATTAGAGGCAAACTTCTGC+TGG - chr2_4:61132844-61132863 None:intergenic 45.0%
!! GTGGAGAAGTGTTTGACCTT+TGG + chr2_4:61132866-61132885 Msa0339850:CDS 45.0%
!! GAGAAGTGTTTGACCTTTGG+AGG + chr2_4:61132869-61132888 Msa0339850:CDS 45.0%
ACAAGCAATAGGCGTTCAGA+AGG - chr2_4:61132896-61132915 None:intergenic 45.0%
GGATGAAAATGAGCCTCTTC+AGG + chr2_4:61132937-61132956 Msa0339850:CDS 45.0%
AGGGTCTGCAATAATCCAAG+AGG + chr2_4:61133040-61133059 Msa0339850:intron 45.0%
!! GTAGAGAAACTTGTTGCTGC+CGG + chr2_4:61133549-61133568 Msa0339850:CDS 45.0%
TCCTCATACTACTTAGGGGA+GGG + chr2_4:61133749-61133768 Msa0339850:exon 45.0%
GTTGTCTGTACAGCTAACTG+AGG + chr2_4:61133780-61133799 Msa0339850:three_prime_UTR 45.0%
TGATGCAGGAGAACAAAGGA+GGG - chr2_4:61133817-61133836 None:intergenic 45.0%
TTGATGCAGGAGAACAAAGG+AGG - chr2_4:61133818-61133837 None:intergenic 45.0%
!! TGTGATGGATAGTAGCCGAT+TGG + chr2_4:61133871-61133890 Msa0339850:three_prime_UTR 45.0%
! GTTTCAGCTCGTAGCGTTGA+TGG + chr2_4:61128410-61128429 Msa0339850:five_prime_UTR 50.0%
!! TTCAGCTCGTAGCGTTGATG+GGG + chr2_4:61128412-61128431 Msa0339850:five_prime_UTR 50.0%
ATGGGTAGAAGGCCAGTGAT+TGG + chr2_4:61128647-61128666 Msa0339850:CDS 50.0%
! GGTGGTAATGAGGGTTCGTT+TGG + chr2_4:61128671-61128690 Msa0339850:CDS 50.0%
! GGATGTTGCTTCGCGATCAA+CGG + chr2_4:61128717-61128736 Msa0339850:CDS 50.0%
GTTCGTTGAGTGCAGTTGGA+GGG + chr2_4:61128813-61128832 Msa0339850:CDS 50.0%
AGTGCAGTTGGAGGGTTGTT+TGG + chr2_4:61128821-61128840 Msa0339850:CDS 50.0%
!!! CGGGAATGGTTTTGGTTCTG+AGG + chr2_4:61128889-61128908 Msa0339850:CDS 50.0%
AGCAAAGGAGGAGGAAGTCT+GGG - chr2_4:61128974-61128993 None:intergenic 50.0%
TAGCAAAGGAGGAGGAAGTC+TGG - chr2_4:61128975-61128994 None:intergenic 50.0%
AAAGGCGGAGCTTCTGCAAT+TGG + chr2_4:61129028-61129047 Msa0339850:CDS 50.0%
CACCTCCGGGGTTTAACAAT+AGG + chr2_4:61129116-61129135 Msa0339850:CDS 50.0%
ACTAGAGGTTCTGCTGAGTG+GGG + chr2_4:61129172-61129191 Msa0339850:CDS 50.0%
!! CTCATTGGTTTGCCAGGACT+AGG + chr2_4:61129205-61129224 Msa0339850:CDS 50.0%
GTTTGCCAGGACTAGGTCTT+GGG + chr2_4:61129212-61129231 Msa0339850:CDS 50.0%
TTAGTCCCAAGACCTAGTCC+TGG - chr2_4:61129220-61129239 None:intergenic 50.0%
GGACATAACACCTCTGTCAC+AGG + chr2_4:61129696-61129715 Msa0339850:CDS 50.0%
TCAAATGCGTTACGACTGGC+TGG - chr2_4:61129735-61129754 None:intergenic 50.0%
TCTCAAACCATCAGTGGCTG+AGG - chr2_4:61129817-61129836 None:intergenic 50.0%
TCACCTGCTTCCCAAAATGC+TGG + chr2_4:61129858-61129877 Msa0339850:CDS 50.0%
TTCCCAAAATGCTGGTCCAC+AGG + chr2_4:61129866-61129885 Msa0339850:CDS 50.0%
! AGCCTGTGGACCAGCATTTT+GGG - chr2_4:61129871-61129890 None:intergenic 50.0%
! AAGCCTGTGGACCAGCATTT+TGG - chr2_4:61129872-61129891 None:intergenic 50.0%
TCTTATGCTGCTGCACTTGG+TGG + chr2_4:61129897-61129916 Msa0339850:CDS 50.0%
CAGGAGTAGTGCTTCGTGAT+AGG - chr2_4:61129929-61129948 None:intergenic 50.0%
TGATCCACAACACGTTGCCA+GGG + chr2_4:61129947-61129966 Msa0339850:CDS 50.0%
TCCCACTACCAATAGGTGTG+GGG - chr2_4:61129986-61130005 None:intergenic 50.0%
CTCCCACTACCAATAGGTGT+GGG - chr2_4:61129987-61130006 None:intergenic 50.0%
TCTCCCACTACCAATAGGTG+TGG - chr2_4:61129988-61130007 None:intergenic 50.0%
GTTGTTGCTGCTGAGAAGAG+AGG + chr2_4:61130008-61130027 Msa0339850:CDS 50.0%
ACCAGTCCTGATGTGTCATC+TGG + chr2_4:61130035-61130054 Msa0339850:CDS 50.0%
ATGCAAGGTGGTCAGGATCA+TGG + chr2_4:61130194-61130213 Msa0339850:CDS 50.0%
CAGGTAAGAGAAGTGGAAGC+GGG + chr2_4:61130282-61130301 Msa0339850:CDS 50.0%
AAGTCCATCCTTGGATAGGC+AGG + chr2_4:61130316-61130335 Msa0339850:CDS 50.0%
ACCACCTCCACCACTATAAG+GGG - chr2_4:61130402-61130421 None:intergenic 50.0%
TCTGAAGGCTGGTATTGTGC+AGG - chr2_4:61130428-61130447 None:intergenic 50.0%
GCACAATACCAGCCTTCAGA+TGG + chr2_4:61130428-61130447 Msa0339850:CDS 50.0%
GTATGCTGGAAATCCTGCTG+TGG + chr2_4:61130490-61130509 Msa0339850:CDS 50.0%
! GCAACGTTTTCAAACAGGGG+TGG - chr2_4:61130554-61130573 None:intergenic 50.0%
GATGGAGAAGCAACTCCAGA+GGG - chr2_4:61130635-61130654 None:intergenic 50.0%
AGATGGAGAAGCAACTCCAG+AGG - chr2_4:61130636-61130655 None:intergenic 50.0%
AGTTGTGCAGCAGCATACTC+GGG - chr2_4:61130755-61130774 None:intergenic 50.0%
ACCATGATGGTTGGAACCAC+CGG - chr2_4:61130918-61130937 None:intergenic 50.0%
GAGTTTGCCATTGGACTTCC+TGG - chr2_4:61130980-61130999 None:intergenic 50.0%
TCCACTTCTCCAGTTGGATC+TGG + chr2_4:61131004-61131023 Msa0339850:CDS 50.0%
ATAGGACTGCCAGATCCAAC+TGG - chr2_4:61131016-61131035 None:intergenic 50.0%
TTTCCAGCATCTAGGTGCCA+TGG - chr2_4:61131103-61131122 None:intergenic 50.0%
! GTGCTGATCAATATGGGAGC+CGG + chr2_4:61131320-61131339 Msa0339850:intron 50.0%
TGGTTGTCGAGTCATCCAGA+AGG + chr2_4:61131626-61131645 Msa0339850:CDS 50.0%
CGCTGTGTACGAGATCAGAA+TGG + chr2_4:61131811-61131830 Msa0339850:CDS 50.0%
CAACCCATCCATATGGTTGC+CGG + chr2_4:61131926-61131945 Msa0339850:CDS 50.0%
AACCCATCCATATGGTTGCC+GGG + chr2_4:61131927-61131946 Msa0339850:CDS 50.0%
TGTATCACCCGGCAACCATA+TGG - chr2_4:61131937-61131956 None:intergenic 50.0%
ATATGGTTGCCGGGTGATAC+AGG + chr2_4:61131936-61131955 Msa0339850:CDS 50.0%
ATGTTGGCCCAGGATCAGTA+TGG + chr2_4:61132112-61132131 Msa0339850:CDS 50.0%
GTATGGCAACTATGTCGTCC+AGG + chr2_4:61132129-61132148 Msa0339850:CDS 50.0%
GCATGGAACGCAACTAGCAA+CGG - chr2_4:61133648-61133667 None:intergenic 50.0%
CTCCTCATACTACTTAGGGG+AGG + chr2_4:61133748-61133767 Msa0339850:exon 50.0%
GATGCAGGAGAACAAAGGAG+GGG - chr2_4:61133816-61133835 None:intergenic 50.0%
! AATTGGCGGCGATTGGTTGC+TGG - chr2_4:61128179-61128198 None:intergenic 55.0%
GCGATGAAATTGGCGGCGAT+TGG - chr2_4:61128186-61128205 None:intergenic 55.0%
GGTAGAAGGCCAGTGATTGG+TGG + chr2_4:61128650-61128669 Msa0339850:CDS 55.0%
AGAAGGCCAGTGATTGGTGG+TGG + chr2_4:61128653-61128672 Msa0339850:CDS 55.0%
TGGATCAGCTCCTCCAACTG+TGG + chr2_4:61128787-61128806 Msa0339850:CDS 55.0%
ATCAGCTCCTCCAACTGTGG+AGG + chr2_4:61128790-61128809 Msa0339850:CDS 55.0%
TCAGCTCCTCCAACTGTGGA+GGG + chr2_4:61128791-61128810 Msa0339850:CDS 55.0%
AACGAACCCTCCACAGTTGG+AGG - chr2_4:61128800-61128819 None:intergenic 55.0%
CTCAACGAACCCTCCACAGT+TGG - chr2_4:61128803-61128822 None:intergenic 55.0%
GAGGGTTCGTTGAGTGCAGT+TGG + chr2_4:61128809-61128828 Msa0339850:CDS 55.0%
GGTTCGTTGAGTGCAGTTGG+AGG + chr2_4:61128812-61128831 Msa0339850:CDS 55.0%
GCAGTTGGAGGGTTGTTTGG+AGG + chr2_4:61128824-61128843 Msa0339850:CDS 55.0%
GTTGGAGGGTTGTTTGGAGG+TGG + chr2_4:61128827-61128846 Msa0339850:CDS 55.0%
! AGCGGTGTTTGCTACACCTC+CGG + chr2_4:61129102-61129121 Msa0339850:CDS 55.0%
GAAAAGAGAGACTGAGGCGG+TGG + chr2_4:61129138-61129157 Msa0339850:CDS 55.0%
!! GATGGGCTCATTGGTTTGCC+AGG + chr2_4:61129199-61129218 Msa0339850:CDS 55.0%
GGTTTGCCAGGACTAGGTCT+TGG + chr2_4:61129211-61129230 Msa0339850:CDS 55.0%
AGACGGAAAGCCTGTGACAG+AGG - chr2_4:61129709-61129728 None:intergenic 55.0%
! TTACGACTGGCTGGACGAGA+CGG - chr2_4:61129726-61129745 None:intergenic 55.0%
ATCCTCTGCAGAAGCAGAGC+TGG + chr2_4:61129773-61129792 Msa0339850:CDS 55.0%
CATCAGTGGCTGAGGAGTCA+TGG - chr2_4:61129809-61129828 None:intergenic 55.0%
CATGACTCCTCAGCCACTGA+TGG + chr2_4:61129807-61129826 Msa0339850:CDS 55.0%
!! GGACCAGCATTTTGGGAAGC+AGG - chr2_4:61129864-61129883 None:intergenic 55.0%
CTGGCAACGTGTTGTGGATC+AGG - chr2_4:61129948-61129967 None:intergenic 55.0%
CTGATCCACAACACGTTGCC+AGG + chr2_4:61129946-61129965 Msa0339850:CDS 55.0%
ATAGGTGTGGGGCAAGGACT+GGG - chr2_4:61129975-61129994 None:intergenic 55.0%
AATAGGTGTGGGGCAAGGAC+TGG - chr2_4:61129976-61129995 None:intergenic 55.0%
AGTCCTTGCCCCACACCTAT+TGG + chr2_4:61129975-61129994 Msa0339850:CDS 55.0%
CTACCAATAGGTGTGGGGCA+AGG - chr2_4:61129981-61130000 None:intergenic 55.0%
TGCCCCACACCTATTGGTAG+TGG + chr2_4:61129981-61130000 Msa0339850:CDS 55.0%
! GCCCCACACCTATTGGTAGT+GGG + chr2_4:61129982-61130001 Msa0339850:CDS 55.0%
GCCAGATGACACATCAGGAC+TGG - chr2_4:61130039-61130058 None:intergenic 55.0%
TCGACCTGCCTATCCAAGGA+TGG - chr2_4:61130323-61130342 None:intergenic 55.0%
ATGCTCGACCTGCCTATCCA+AGG - chr2_4:61130327-61130346 None:intergenic 55.0%
TCACCTGGCTCCCCTTATAG+TGG + chr2_4:61130389-61130408 Msa0339850:CDS 55.0%
! TCCCCTTATAGTGGTGGAGG+TGG + chr2_4:61130398-61130417 Msa0339850:CDS 55.0%
TTCCAGCATACCCACCACTC+AGG - chr2_4:61130481-61130500 None:intergenic 55.0%
TCCTGCTGTGGCATCCTTCA+TGG + chr2_4:61130502-61130521 Msa0339850:CDS 55.0%
CGTTGCTGCAGCATCAGCTA+TGG + chr2_4:61130568-61130587 Msa0339850:CDS 55.0%
CCACCGGATTTACCACCCAA+TGG - chr2_4:61130902-61130921 None:intergenic 55.0%
CCATTGGGTGGTAAATCCGG+TGG + chr2_4:61130899-61130918 Msa0339850:CDS 55.0%
TCCGGTGGTTCCAACCATCA+TGG + chr2_4:61130914-61130933 Msa0339850:CDS 55.0%
GCCAGATCCAACTGGAGAAG+TGG - chr2_4:61131008-61131027 None:intergenic 55.0%
GAGGAATGTAGCTGGGGTCA+TGG + chr2_4:61131075-61131094 Msa0339850:CDS 55.0%
CACCCGGCAACCATATGGAT+GGG - chr2_4:61131932-61131951 None:intergenic 55.0%
TCACCCGGCAACCATATGGA+TGG - chr2_4:61131933-61131952 None:intergenic 55.0%
AGCAGTTAGCATGTTGGCCC+AGG + chr2_4:61132102-61132121 Msa0339850:CDS 55.0%
! ACACGAAGAGAAGCGCAGCT+GGG - chr2_4:61132337-61132356 None:intergenic 55.0%
! AACACGAAGAGAAGCGCAGC+TGG - chr2_4:61132338-61132357 None:intergenic 55.0%
GCGTTCAGAAGGACCTCCAA+AGG - chr2_4:61132885-61132904 None:intergenic 55.0%
!! GAGAAACTTGTTGCTGCCGG+AGG + chr2_4:61133552-61133571 Msa0339850:CDS 55.0%
TGGAACGCAACTAGCAACGG+CGG - chr2_4:61133645-61133664 None:intergenic 55.0%
GCCCTCCCCTAAGTAGTATG+AGG - chr2_4:61133753-61133772 None:intergenic 55.0%
ACACCTCTGATGTCCCTGCA+TGG + chr2_4:61133987-61134006 Msa0339850:three_prime_UTR 55.0%
CTTCCATGCAGGGACATCAG+AGG - chr2_4:61133993-61134012 None:intergenic 55.0%
GGCGGAGCTTCTGCAATTGG+TGG + chr2_4:61129031-61129050 Msa0339850:CDS 60.0%
! GCGGTGTTTGCTACACCTCC+GGG + chr2_4:61129103-61129122 Msa0339850:CDS 60.0%
! CGGTGTTTGCTACACCTCCG+GGG + chr2_4:61129104-61129123 Msa0339850:CDS 60.0%
AGAGGTTCTGCTGAGTGGGG+TGG + chr2_4:61129175-61129194 Msa0339850:CDS 60.0%
AGCCAGCTCTGCTTCTGCAG+AGG - chr2_4:61129778-61129797 None:intergenic 60.0%
CCACCACTATAAGGGGAGCC+AGG - chr2_4:61130395-61130414 None:intergenic 60.0%
CCTGGCTCCCCTTATAGTGG+TGG + chr2_4:61130392-61130411 Msa0339850:CDS 60.0%
GGCTCCCCTTATAGTGGTGG+AGG + chr2_4:61130395-61130414 Msa0339850:CDS 60.0%
GCCATGAAGGATGCCACAGC+AGG - chr2_4:61130506-61130525 None:intergenic 60.0%
AGCTATGGCGTCCCCTGGAA+TGG + chr2_4:61130583-61130602 Msa0339850:CDS 60.0%
! CTTGGAGGTGGTTTGCCCTC+TGG + chr2_4:61130617-61130636 Msa0339850:CDS 60.0%
TAGCTGGGGTCATGGCACCA+TGG + chr2_4:61131083-61131102 Msa0339850:CDS 60.0%
GCACCATGGCACCTAGATGC+TGG + chr2_4:61131097-61131116 Msa0339850:CDS 60.0%
GGAACGCAACTAGCAACGGC+GGG - chr2_4:61133644-61133663 None:intergenic 60.0%
TCGCGATCAACGGCGTCGTG+AGG + chr2_4:61128727-61128746 Msa0339850:CDS 65.0%
TCTGCTGAGTGGGGTGGCGA+TGG + chr2_4:61129181-61129200 Msa0339850:CDS 65.0%
CTGCTGAGTGGGGTGGCGAT+GGG + chr2_4:61129182-61129201 Msa0339850:CDS 65.0%
! TGGGGTGGCGATGGGCTCAT+TGG + chr2_4:61129190-61129209 Msa0339850:CDS 65.0%
GGAGCCCTGGCAACGTGTTG+TGG - chr2_4:61129954-61129973 None:intergenic 65.0%
!! GGCCTGAGTGGTGGGTATGC+TGG + chr2_4:61130476-61130495 Msa0339850:CDS 65.0%
GCATCAGCTATGGCGTCCCC+TGG + chr2_4:61130578-61130597 Msa0339850:CDS 65.0%
GGGGCAAGGACTGGGAGCCC+TGG - chr2_4:61129967-61129986 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61128095 61134222 61128095 ID=Msa0339850;Name=Msa0339850
chr2_4 mRNA 61128095 61134222 61128095 ID=Msa0339850-mRNA-1;Parent=Msa0339850;Name=Msa0339850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=540|1|1|1|1|1|9|458|1050
chr2_4 exon 61128095 61129267 61128095 ID=Msa0339850-mRNA-1:exon:19094;Parent=Msa0339850-mRNA-1
chr2_4 exon 61129687 61131224 61129687 ID=Msa0339850-mRNA-1:exon:19095;Parent=Msa0339850-mRNA-1
chr2_4 exon 61131321 61131462 61131321 ID=Msa0339850-mRNA-1:exon:19096;Parent=Msa0339850-mRNA-1
chr2_4 exon 61131540 61131647 61131540 ID=Msa0339850-mRNA-1:exon:19097;Parent=Msa0339850-mRNA-1
chr2_4 exon 61131745 61131957 61131745 ID=Msa0339850-mRNA-1:exon:19098;Parent=Msa0339850-mRNA-1
chr2_4 exon 61132040 61132150 61132040 ID=Msa0339850-mRNA-1:exon:19099;Parent=Msa0339850-mRNA-1
chr2_4 exon 61132764 61132958 61132764 ID=Msa0339850-mRNA-1:exon:19100;Parent=Msa0339850-mRNA-1
chr2_4 exon 61133399 61133573 61133399 ID=Msa0339850-mRNA-1:exon:19101;Parent=Msa0339850-mRNA-1
chr2_4 exon 61133727 61134222 61133727 ID=Msa0339850-mRNA-1:exon:19102;Parent=Msa0339850-mRNA-1
chr2_4 five_prime_UTR 61128095 61128634 61128095 ID=Msa0339850-mRNA-1:five_prime_utr;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61128635 61129267 61128635 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61129687 61131224 61129687 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61131321 61131462 61131321 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61131540 61131647 61131540 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61131745 61131957 61131745 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61132040 61132150 61132040 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61132764 61132958 61132764 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61133399 61133573 61133399 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 CDS 61133727 61133764 61133727 ID=Msa0339850-mRNA-1:cds;Parent=Msa0339850-mRNA-1
chr2_4 three_prime_UTR 61133765 61134222 61133765 ID=Msa0339850-mRNA-1:three_prime_utr;Parent=Msa0339850-mRNA-1
Gene Sequence

>Msa0339850

ATGTTGTCTGATATGGGTAGAAGGCCAGTGATTGGTGGTGGTAATGAGGGTTCGTTTGGAGATGAATTTGAAAAGGAAATAGGGATGTTGCTTCGCGATCAACGGCGTCGTGAGGTTGATGATCATGAACCTGAACTTAATTTGTATAGGAGTGGATCAGCTCCTCCAACTGTGGAGGGTTCGTTGAGTGCAGTTGGAGGGTTGTTTGGAGGTGGTTCTACGGCTGCTACTGCTGCTGCAGTTTCGAAGTTTTCCGGGAATGGTTTTGGTTCTGAGGAAGAGCTTAGGTCTGATCCTGCGTATCTTCAATATTATTACTCTAATGTTAATTTGAATCCCAGACTTCCTCCTCCTTTGCTATCAAAGGAGGATTGGAGGTTTTCGCAGAGACTAAAAGGCGGAGCTTCTGCAATTGGTGGAATTGGAGATAGGAGGAAGGTTAATGGAGCTGATGAGAATGGTGGAAGAGCGGTGTTTGCTACACCTCCGGGGTTTAACAATAGGAAAAGAGAGACTGAGGCGGTGGCTGATGAGAAAACTAGAGGTTCTGCTGAGTGGGGTGGCGATGGGCTCATTGGTTTGCCAGGACTAGGTCTTGGGACTAAACAAAAGAGCCTTGCAGAAATTTTTCAGGATGACATGGGACATAACACCTCTGTCACAGGCTTTCCGTCTCGTCCAGCCAGTCGTAACGCATTTGATGAAAATGTTGAGATTACATCCTCTGCAGAAGCAGAGCTGGCTCATTTGCGCCATGACTCCTCAGCCACTGATGGTTTGAGATTTGGATCAAATGTTCAGGGATCACCTGCTTCCCAAAATGCTGGTCCACAGGCTTCATATTCTTATGCTGCTGCACTTGGTGGTTCTTCCCTATCACGAAGCACTACTCCTGATCCACAACACGTTGCCAGGGCTCCCAGTCCTTGCCCCACACCTATTGGTAGTGGGAGAGTTGTTGCTGCTGAGAAGAGAGGTATTACCAGTCCTGATGTGTCATCTGGCATCAATGGGTCTGCAGATATTGCATCTGCATTGTCTGGCATGAATTTGTCAACAGATGACGTGCTAGAAGGCGATAACCATTTCCCATCACAAGTTGAGTCTGATGTTAATAATTATCAAAGATATCTTTTTGGTATGCAAGGTGGTCAGGATCATGGCAAGCAGCACGCATATTTAAAGAAGGCTGAATCAGGACACATGCCGAAAACAGCTCACCCTGATTCAGGTAAGAGAAGTGGAAGCGGGTCAGACATGAGAAGTCCATCCTTGGATAGGCAGGTCGAGCATCAAAAGTCTGCTGTTTCTCCCAACAACTTGTATTTCAATGGATCACCTGGCTCCCCTTATAGTGGTGGAGGTGGTTTGCCTGCACAATACCAGCCTTCAGATGGTTCTAATTCACCATTTAATAACTATGGCCTGAGTGGTGGGTATGCTGGAAATCCTGCTGTGGCATCCTTCATGGCTAACCAACTTGGAACTGGTAATATGCCACCCCTGTTTGAAAACGTTGCTGCAGCATCAGCTATGGCGTCCCCTGGAATGGACTCAAGAATTCTTGGAGGTGGTTTGCCCTCTGGAGTTGCTTCTCCATCTGATGTGCATGTTCTCAGTAGAATGGGAAATCAAATTGCAGGTGGTGCTCTTCAGTCTCCTTATGTTGATCCGATGTATCTTCAGTACATGAGGACACCCGAGTATGCTGCTGCACAACTTGCTGCTCTTAACGACCCATCTGTAGACAGGAATTACTTGGGCAACTCATATATGAATTTACTTGAGCTTCAGAAAGCATATCTTGGATCTCTGCTTTCACCTCAGAAGTCACAATACAATGTTCCATTGGGTGGTAAATCCGGTGGTTCCAACCATCATGGTTATTATGGAAATCCTGCATATGGTGTTGGTTTGTCTTATCCAGGAAGTCCAATGGCAAACTCTTTATCCACTTCTCCAGTTGGATCTGGCAGTCCTATTAGGCACAATGACCTGAATATGCATTTTGCTTCTGGAATGAGGAATGTAGCTGGGGTCATGGCACCATGGCACCTAGATGCTGGAAACGTAGATGAAAATTTTGCTTCGTCTCTGTTGGAAGAGTTTAAAAGCAATAAAACAAAGTGCTTTGAGCTTTCTGAAATTTCTGGTCATGTTGTTGAATTCAGTGCTGATCAATATGGGAGCCGGTTTATTCAACAAAAGCTTGAAACAGCAACCACTGAAGAAAAGAATATGGTTTATCAGGAAATCACGCCACATGCTCTTGCTTTGATGACCGATGTCTTTGGTAATTATGTGGTTCAGAAGTTTTTTGAGCATGGACTTGCATCCCAGAGAAGAGAGTTAGCCAACAAGCTTTATGGCCATGTTCTGACACTTAGCCTTCAAATGTATGGTTGTCGAGTCATCCAGAAGGCCATAGAAGTTGTTGATCTGGACCAGAAGATTAAAATGGTTCAAGAGCTTGATGGTAATATCATGCGCTGTGTACGAGATCAGAATGGCAACCATGTCATTCAGAAGTGTATTGAATGCGTACCTGAAGATGCAATTGATTTTATTGTCTCAACTTTTTTTGATCAAGTTGTGACACTATCAACCCATCCATATGGTTGCCGGGTGATACAGAGAGTACTGGAGCATTGTGAAAACCCTGACACACAACAAAAAGTTATGGATGAGATTTTAGGAGCAGTTAGCATGTTGGCCCAGGATCAGTATGGCAACTATGTCGTCCAGCATGTGCTTGAGCATGGGAAACCTCATGAGCGTTCTACAATCATCAAGGAATTAGCAGGCAATATAGTTCAAATGAGCCAGCAGAAGTTTGCCTCTAATGTTGTGGAGAAGTGTTTGACCTTTGGAGGTCCTTCTGAACGCCTATTGCTTGTAAATGAGATGCTTGGAACTACGGATGAAAATGAGCCTCTTCAGGCAATGATGAAAGATCAGTTTGCTAATTATGTTGTACAGAAGGTGCTGGAGACTTGTGATGACCAACAGCGTGAACTAATTCTTTCTCGAATTAAAGTTCATTTGAATGCATTGAAAAAGTACACCTATGGGAAACATATTGTCGCTCGTGTAGAGAAACTTGTTGCTGCCGGAGAGAGGAGAATTGCTGCTCAGTCTCCTCATACTACTTAG
Protein sequence

>Msa0339850

MLSDMGRRPVIGGGNEGSFGDEFEKEIGMLLRDQRRREVDDHEPELNLYRSGSAPPTVEGSLSAVGGLFGGGSTAATAAAVSKFSGNGFGSEEELRSDPAYLQYYYSNVNLNPRLPPPLLSKEDWRFSQRLKGGASAIGGIGDRRKVNGADENGGRAVFATPPGFNNRKRETEAVADEKTRGSAEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTGFPSRPASRNAFDENVEITSSAEAELAHLRHDSSATDGLRFGSNVQGSPASQNAGPQASYSYAAALGGSSLSRSTTPDPQHVARAPSPCPTPIGSGRVVAAEKRGITSPDVSSGINGSADIASALSGMNLSTDDVLEGDNHFPSQVESDVNNYQRYLFGMQGGQDHGKQHAYLKKAESGHMPKTAHPDSGKRSGSGSDMRSPSLDRQVEHQKSAVSPNNLYFNGSPGSPYSGGGGLPAQYQPSDGSNSPFNNYGLSGGYAGNPAVASFMANQLGTGNMPPLFENVAAASAMASPGMDSRILGGGLPSGVASPSDVHVLSRMGNQIAGGALQSPYVDPMYLQYMRTPEYAAAQLAALNDPSVDRNYLGNSYMNLLELQKAYLGSLLSPQKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANSLSTSPVGSGSPIRHNDLNMHFASGMRNVAGVMAPWHLDAGNVDENFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLYGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCLTFGGPSERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHTT*