AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0660160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0660160 MtrunA17_Chr8g0381911 96.250 320 8 2 14 331 1 318 0.0 634
Msa0660160 MtrunA17_Chr3g0116461 41.304 230 119 5 81 309 83 297 2.84e-51 172
Msa0660160 MtrunA17_Chr7g0271811 25.369 339 190 11 14 331 1 297 9.51e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0660160 AT4G39970.1 72.664 289 70 2 46 330 32 315 8.08e-157 442
Msa0660160 AT3G48420.1 41.270 252 132 5 59 309 57 293 1.23e-53 179
Msa0660160 AT1G56500.2 29.032 248 135 9 80 320 76 289 1.22e-16 81.3
Msa0660160 AT1G56500.1 29.032 248 135 9 80 320 76 289 1.80e-16 80.9
Msa0660160 AT2G38740.1 26.957 230 135 8 71 298 15 213 3.06e-11 63.2

Find 80 sgRNAs with CRISPR-Local

Find 562 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCTTGAAAACCTTAT+TGG 0.118722 4_3:+70742800 Msa0660160:CDS
AGAAAGGAACCATCGCATTT+TGG 0.209442 4_3:-70740517 None:intergenic
CTCTCATGAATTTACTTTCA+TGG 0.234375 4_3:+70744635 Msa0660160:three_prime_UTR
GGATAGTGTTATTGGTTTAC+AGG 0.248290 4_3:+70743267 Msa0660160:CDS
GTGGTAGAGGATAGTGTTAT+TGG 0.306177 4_3:+70743259 Msa0660160:CDS
CAAGTTGATTGACACTCTTC+AGG 0.315114 4_3:+70740717 Msa0660160:CDS
AAAGAAAGTAACTTAATTGT+TGG 0.318877 4_3:-70740243 None:intergenic
GATCAACTTCAGAACCAAAT+TGG 0.329933 4_3:+70740483 Msa0660160:CDS
CTTCTCCTCAACCACTCAAC+TGG 0.334806 4_3:+70740445 Msa0660160:CDS
TTTATGCAGCTTGAAAGATT+TGG 0.334851 4_3:+70744364 Msa0660160:intron
TGGGTTTGCCACCACCAATT+TGG 0.338447 4_3:-70740497 None:intergenic
AGAAGACGCGGTGGTTATTA+CGG 0.344000 4_3:-70740278 None:intergenic
TATTATTAGTTACCTTGAAT+TGG 0.347791 4_3:+70744451 Msa0660160:three_prime_UTR
GTAGGCTTACAATTCCAATA+AGG 0.351543 4_3:-70742814 None:intergenic
AGCCTTGATTGCTTCCTTGC+TGG 0.357422 4_3:+70742929 Msa0660160:CDS
ACGAAAACAGTGTCTGGTTT+GGG 0.389149 4_3:-70740217 None:intergenic
TTCATTGCAAAATGTAATAA+AGG 0.395463 4_3:+70744583 Msa0660160:three_prime_UTR
TACCTTACGTTACTCAAGTC+AGG 0.404434 4_3:-70744264 None:intergenic
AACGAAAACAGTGTCTGGTT+TGG 0.405544 4_3:-70740218 None:intergenic
GCTCGTTCCTCATCAATTGT+AGG 0.409869 4_3:-70740694 None:intergenic
AATATATGTGACTGCTTCCC+AGG 0.410556 4_3:+70743105 Msa0660160:CDS
TACTCACATAAACCAATTCA+AGG 0.419100 4_3:-70744463 None:intergenic
AATTTCAAAACTCCTGGTCT+AGG 0.433116 4_3:-70742564 None:intergenic
GTGTCTGGTTTGGGAGAGAT+AGG 0.433632 4_3:-70740208 None:intergenic
AAATAATCGTACAGCATCTC+TGG 0.438342 4_3:-70742598 None:intergenic
TGATGAAGATGAATGGTAAA+TGG 0.439886 4_3:+70740118 Msa0660160:CDS
ATCTGAGCACTTACATCGTC+AGG 0.441291 4_3:+70740377 Msa0660160:CDS
TCCATCAATTTCAAAACTCC+TGG 0.446507 4_3:-70742570 None:intergenic
TACAAAGATATAATCAAGTC+TGG 0.450516 4_3:+70742423 Msa0660160:CDS
TGGATAACGAAAACAGTGTC+TGG 0.452538 4_3:-70740223 None:intergenic
GGAGAGATAGGAATGGGAAG+TGG 0.465100 4_3:-70740196 None:intergenic
CTGAAGAGTGTCAATCAACT+TGG 0.465240 4_3:-70740716 None:intergenic
CACATCTTCCACCGCTGAGC+AGG 0.465541 4_3:+70744102 Msa0660160:CDS
ATATCCCAGTTGAGTGGTTG+AGG 0.470059 4_3:-70740450 None:intergenic
AGTGGTTGAGGAGAAGAAGA+TGG 0.476823 4_3:-70740438 None:intergenic
TGACTGTGACGGCGTCATCT+TGG 0.485254 4_3:+70740353 Msa0660160:CDS
GAGATAGGAATGGGAAGTGG+AGG 0.489137 4_3:-70740193 None:intergenic
TACCAGCAAGGAAGCAATCA+AGG 0.493810 4_3:-70742931 None:intergenic
TTGGTTTATGTGAGTAAAGC+CGG 0.504542 4_3:+70744470 Msa0660160:three_prime_UTR
TAGAATTATTGTTTATGACA+TGG 0.513032 4_3:+70744419 Msa0660160:exon
GTCACATATATTGACGGGTC+GGG 0.515661 4_3:-70743094 None:intergenic
AGATAGGAATGGGAAGTGGA+GGG 0.517620 4_3:-70740192 None:intergenic
GTTTCGAATAACGTTGATGA+AGG 0.523215 4_3:-70740667 None:intergenic
CTACAGGCAGCAACACAAGC+AGG 0.528121 4_3:+70744058 Msa0660160:intron
GGTTTGGGAGAGATAGGAAT+GGG 0.529561 4_3:-70740202 None:intergenic
TAAAGCCGGTCGAAAGTTTG+AGG 0.533834 4_3:+70744484 Msa0660160:three_prime_UTR
GGTCCTCACCTGCTCAGCGG+TGG 0.535481 4_3:-70744110 None:intergenic
GACATTCAAAATACAAACAA+TGG 0.540677 4_3:-70744613 None:intergenic
ATAAACCTCAAACTTTCGAC+CGG 0.546212 4_3:-70744489 None:intergenic
TTTAGGTACTTTAAGGAACA+TGG 0.552369 4_3:+70740640 Msa0660160:intron
TTCTCCTCAACCACTCAACT+GGG 0.557699 4_3:+70740446 Msa0660160:CDS
CAAGTCAGGGTAGATTGCTA+TGG 0.559972 4_3:-70744250 None:intergenic
TATTGTGCATTGCAGAAGTT+GGG 0.566001 4_3:+70743214 Msa0660160:intron
ACTTTAAGGTGATGATGTGA+AGG 0.567495 4_3:+70743063 Msa0660160:intron
AAGCAGTCACATATATTGAC+GGG 0.575556 4_3:-70743099 None:intergenic
GAAGCAGTCACATATATTGA+CGG 0.578807 4_3:-70743100 None:intergenic
ACCTTACGTTACTCAAGTCA+GGG 0.584360 4_3:-70744263 None:intergenic
AAAGTGATGATGAAGATGAA+TGG 0.585437 4_3:+70740111 Msa0660160:CDS
CTTCAGAACCAAATTGGTGG+TGG 0.586682 4_3:+70740489 Msa0660160:CDS
GCTCTTATATTTGACTGTGA+CGG 0.589256 4_3:+70740342 Msa0660160:CDS
TGGTTTGGGAGAGATAGGAA+TGG 0.592029 4_3:-70740203 None:intergenic
GGTACTTTAAGGAACATGGA+TGG 0.594312 4_3:+70740644 Msa0660160:intron
ACCCTGACTTGAGTAACGTA+AGG 0.601515 4_3:+70744262 Msa0660160:CDS
CGTTCCTCATCAATTGTAGG+AGG 0.609209 4_3:-70740691 None:intergenic
CTCAGCGGTGGAAGATGTGT+AGG 0.610677 4_3:-70744098 None:intergenic
CAACTTCAGAACCAAATTGG+TGG 0.613914 4_3:+70740486 Msa0660160:CDS
AATTCTATATCCCAGTTGAG+TGG 0.615799 4_3:-70740456 None:intergenic
AACTCCTCCTACAATTGATG+AGG 0.620607 4_3:+70740687 Msa0660160:CDS
AAAGTTTGAGGTTTATCACA+AGG 0.626874 4_3:+70744496 Msa0660160:three_prime_UTR
GTGGCAAACCCAAAATGCGA+TGG 0.629207 4_3:+70740508 Msa0660160:CDS
AGTCACATATATTGACGGGT+CGG 0.635716 4_3:-70743095 None:intergenic
TACAGGCAGCAACACAAGCA+GGG 0.645859 4_3:+70744059 Msa0660160:intron
CTGAGACTTTAAAGAAGACG+CGG 0.660397 4_3:-70740290 None:intergenic
GTGATGTGCATATACCAGCA+AGG 0.664382 4_3:-70742943 None:intergenic
ACAAGCAGGGATGTCTTGTG+TGG 0.683817 4_3:+70744072 Msa0660160:CDS
GCACAGGTAAAACCTAGACC+AGG 0.687401 4_3:+70742552 Msa0660160:intron
GAGGGTCCTCACCTGCTCAG+CGG 0.688575 4_3:-70744113 None:intergenic
GTGAGTGAGAGTAGAAGCCA+TGG 0.700081 4_3:-70740154 None:intergenic
AGACTTTAAAGAAGACGCGG+TGG 0.704059 4_3:-70740287 None:intergenic
ATGGTTGATGAACATGACCA+TGG 0.713190 4_3:+70740137 Msa0660160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATATTAAATTTATTTTTTG+AGG + chr4_3:70741580-70741599 Msa0660160:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG + chr4_3:70741582-70741601 Msa0660160:intron 10.0%
!! TTAAATAAAATTGATAGATA+AGG - chr4_3:70743043-70743062 None:intergenic 10.0%
!!! TCAATTTTATTTAAACTTTA+AGG + chr4_3:70743049-70743068 Msa0660160:intron 10.0%
!! GATATTAAATTTATTTATTG+AGG + chr4_3:70743826-70743845 Msa0660160:intron 10.0%
!! TATTAAATTTATTTATTGAG+GGG + chr4_3:70743828-70743847 Msa0660160:intron 10.0%
!!! GATATTAAATTTATTTTTTG+AGG + chr4_3:70741580-70741599 Msa0660160:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG + chr4_3:70741582-70741601 Msa0660160:intron 10.0%
!! TTAAATAAAATTGATAGATA+AGG - chr4_3:70743043-70743062 None:intergenic 10.0%
!!! TCAATTTTATTTAAACTTTA+AGG + chr4_3:70743049-70743068 Msa0660160:intron 10.0%
!! GATATTAAATTTATTTATTG+AGG + chr4_3:70743826-70743845 Msa0660160:intron 10.0%
!! TATTAAATTTATTTATTGAG+GGG + chr4_3:70743828-70743847 Msa0660160:intron 10.0%
!!! TTATTGTATTGAGAATTTTT+AGG + chr4_3:70740623-70740642 Msa0660160:intron 15.0%
!! TTGTATTTATTATTATGACT+TGG + chr4_3:70740775-70740794 Msa0660160:intron 15.0%
!! AAAATAAATTTAATATCGTG+TGG - chr4_3:70741577-70741596 None:intergenic 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG + chr4_3:70741583-70741602 Msa0660160:intron 15.0%
!!! AAAATTTAGACTTTATTTGT+GGG - chr4_3:70741687-70741706 None:intergenic 15.0%
!!! AAAAATTTAGACTTTATTTG+TGG - chr4_3:70741688-70741707 None:intergenic 15.0%
!!! GTTTGTTTTAAGTATTTATT+TGG + chr4_3:70741708-70741727 Msa0660160:intron 15.0%
!! TAAATGAAAAATTTAGAAGT+TGG + chr4_3:70741776-70741795 Msa0660160:intron 15.0%
!! AAATGAAAAATTTAGAAGTT+GGG + chr4_3:70741777-70741796 Msa0660160:intron 15.0%
!!! ATATTACAAAAGTATATATC+CGG - chr4_3:70742625-70742644 None:intergenic 15.0%
!!! ATAAATTATACTTGGTAATT+TGG - chr4_3:70743193-70743212 None:intergenic 15.0%
!! CACAATATATAAATTATACT+TGG - chr4_3:70743201-70743220 None:intergenic 15.0%
!! TAAATAAATTTAATATCGTG+TGG - chr4_3:70743823-70743842 None:intergenic 15.0%
!! ATTAAATTTATTTATTGAGG+GGG + chr4_3:70743829-70743848 Msa0660160:intron 15.0%
!! ATAAAAGAAAAGAAAAACAA+AGG - chr4_3:70744529-70744548 None:intergenic 15.0%
!!! TTATTGTATTGAGAATTTTT+AGG + chr4_3:70740623-70740642 Msa0660160:intron 15.0%
!! TTGTATTTATTATTATGACT+TGG + chr4_3:70740775-70740794 Msa0660160:intron 15.0%
!! AAAATAAATTTAATATCGTG+TGG - chr4_3:70741577-70741596 None:intergenic 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG + chr4_3:70741583-70741602 Msa0660160:intron 15.0%
!!! AAAATTTAGACTTTATTTGT+GGG - chr4_3:70741687-70741706 None:intergenic 15.0%
!!! AAAAATTTAGACTTTATTTG+TGG - chr4_3:70741688-70741707 None:intergenic 15.0%
!!! GTTTGTTTTAAGTATTTATT+TGG + chr4_3:70741708-70741727 Msa0660160:intron 15.0%
!! TAAATGAAAAATTTAGAAGT+TGG + chr4_3:70741776-70741795 Msa0660160:intron 15.0%
!! AAATGAAAAATTTAGAAGTT+GGG + chr4_3:70741777-70741796 Msa0660160:intron 15.0%
!!! ATATTACAAAAGTATATATC+CGG - chr4_3:70742625-70742644 None:intergenic 15.0%
!!! ATAAATTATACTTGGTAATT+TGG - chr4_3:70743193-70743212 None:intergenic 15.0%
!! CACAATATATAAATTATACT+TGG - chr4_3:70743201-70743220 None:intergenic 15.0%
!! TAAATAAATTTAATATCGTG+TGG - chr4_3:70743823-70743842 None:intergenic 15.0%
!! ATTAAATTTATTTATTGAGG+GGG + chr4_3:70743829-70743848 Msa0660160:intron 15.0%
!! ATAAAAGAAAAGAAAAACAA+AGG - chr4_3:70744529-70744548 None:intergenic 15.0%
!! AAAGAAAGTAACTTAATTGT+TGG - chr4_3:70740246-70740265 None:intergenic 20.0%
!! TAAAAGAAAGAAAGAAAGAA+AGG - chr4_3:70740536-70740555 None:intergenic 20.0%
!! TTTACTCAATCAAAATAAGT+TGG - chr4_3:70741216-70741235 None:intergenic 20.0%
!!! AAATTTAGACTTTATTTGTG+GGG - chr4_3:70741686-70741705 None:intergenic 20.0%
!! AAGAAACATGTTAAAATGAT+GGG - chr4_3:70741996-70742015 None:intergenic 20.0%
!! TAAGAAACATGTTAAAATGA+TGG - chr4_3:70741997-70742016 None:intergenic 20.0%
!! CATTTAATCATGTTAAGATA+TGG + chr4_3:70742165-70742184 Msa0660160:intron 20.0%
!!! TTTGAAAAGTGAAATTTTGA+GGG + chr4_3:70743155-70743174 Msa0660160:intron 20.0%
!! AACATGATTAAATGCAATTT+AGG - chr4_3:70742159-70742178 None:intergenic 20.0%
!! CAAAACTAATAAATTTCTAC+AGG + chr4_3:70744042-70744061 Msa0660160:intron 20.0%
!! TACGATTTGATATTGAAATT+CGG + chr4_3:70744159-70744178 Msa0660160:intron 20.0%
!! TAGAATTATTGTTTATGACA+TGG + chr4_3:70744419-70744438 Msa0660160:exon 20.0%
!! TATTATTAGTTACCTTGAAT+TGG + chr4_3:70744451-70744470 Msa0660160:three_prime_UTR 20.0%
!!! TTCTTTTACATGTTTTTATG+TGG + chr4_3:70744554-70744573 Msa0660160:three_prime_UTR 20.0%
!! TTCATTGCAAAATGTAATAA+AGG + chr4_3:70744583-70744602 Msa0660160:three_prime_UTR 20.0%
!! AAAGAAAGTAACTTAATTGT+TGG - chr4_3:70740246-70740265 None:intergenic 20.0%
!! TAAAAGAAAGAAAGAAAGAA+AGG - chr4_3:70740536-70740555 None:intergenic 20.0%
!! TTTACTCAATCAAAATAAGT+TGG - chr4_3:70741216-70741235 None:intergenic 20.0%
!!! AAATTTAGACTTTATTTGTG+GGG - chr4_3:70741686-70741705 None:intergenic 20.0%
!! AAGAAACATGTTAAAATGAT+GGG - chr4_3:70741996-70742015 None:intergenic 20.0%
!! TAAGAAACATGTTAAAATGA+TGG - chr4_3:70741997-70742016 None:intergenic 20.0%
!! CATTTAATCATGTTAAGATA+TGG + chr4_3:70742165-70742184 Msa0660160:intron 20.0%
!!! TTTGAAAAGTGAAATTTTGA+GGG + chr4_3:70743155-70743174 Msa0660160:intron 20.0%
!! AACATGATTAAATGCAATTT+AGG - chr4_3:70742159-70742178 None:intergenic 20.0%
!! CAAAACTAATAAATTTCTAC+AGG + chr4_3:70744042-70744061 Msa0660160:intron 20.0%
!! TACGATTTGATATTGAAATT+CGG + chr4_3:70744159-70744178 Msa0660160:intron 20.0%
!! TAGAATTATTGTTTATGACA+TGG + chr4_3:70744419-70744438 Msa0660160:exon 20.0%
!! TATTATTAGTTACCTTGAAT+TGG + chr4_3:70744451-70744470 Msa0660160:three_prime_UTR 20.0%
!!! TTCTTTTACATGTTTTTATG+TGG + chr4_3:70744554-70744573 Msa0660160:three_prime_UTR 20.0%
!! TTCATTGCAAAATGTAATAA+AGG + chr4_3:70744583-70744602 Msa0660160:three_prime_UTR 20.0%
!!! GAGAATTTTTAGGTACTTTA+AGG + chr4_3:70740633-70740652 Msa0660160:intron 25.0%
! TGTGTAGTAATTTAGTACTT+AGG + chr4_3:70740921-70740940 Msa0660160:intron 25.0%
! CTGGTTACTATTTATTTAGA+GGG + chr4_3:70741036-70741055 Msa0660160:intron 25.0%
! TGGTTACTATTTATTTAGAG+GGG + chr4_3:70741037-70741056 Msa0660160:intron 25.0%
! ACGATTATAGTTTCATTGTT+TGG + chr4_3:70741126-70741145 Msa0660160:intron 25.0%
!! CAATCAAAATAAGTTGGAAA+AGG - chr4_3:70741210-70741229 None:intergenic 25.0%
!! AATTTGAGACTTAAGTCAAA+TGG + chr4_3:70741335-70741354 Msa0660160:intron 25.0%
! TTATTTCATCTAACCAATGT+GGG - chr4_3:70741420-70741439 None:intergenic 25.0%
! ATTTACAGAACTTATGATAC+TGG - chr4_3:70741761-70741780 None:intergenic 25.0%
! CATGATTCACTTATATTTCT+TGG - chr4_3:70742046-70742065 None:intergenic 25.0%
! TACAAAGATATAATCAAGTC+TGG + chr4_3:70742423-70742442 Msa0660160:CDS 25.0%
!! ATTAAATTACCTTCGCATTT+TGG + chr4_3:70742530-70742549 Msa0660160:intron 25.0%
! TTAATACTTGTTCTCTCTAT+TGG + chr4_3:70742838-70742857 Msa0660160:intron 25.0%
! TAATACTTGTTCTCTCTATT+GGG + chr4_3:70742839-70742858 Msa0660160:intron 25.0%
! TTGATAGATAAGGTTAAACT+TGG - chr4_3:70743033-70743052 None:intergenic 25.0%
! GTATTGTCATATTAAAACCT+GGG - chr4_3:70743125-70743144 None:intergenic 25.0%
!!! CTTTGAAAAGTGAAATTTTG+AGG + chr4_3:70743154-70743173 Msa0660160:intron 25.0%
! CTCTTTATATGTTGTGAAAA+AGG + chr4_3:70743336-70743355 Msa0660160:intron 25.0%
!!! TTGTTGTTTGATATAGTAGT+TGG + chr4_3:70742082-70742101 Msa0660160:intron 25.0%
! TCTATTCACAAATCTCTATT+TGG + chr4_3:70743465-70743484 Msa0660160:intron 25.0%
! AAATGCAATTTAGGTAGATA+AGG - chr4_3:70743493-70743512 None:intergenic 25.0%
! TTAGAAAATCATACCTTTCT+CGG + chr4_3:70743729-70743748 Msa0660160:intron 25.0%
! TCAGTTTAATATCTGATATG+TGG + chr4_3:70743788-70743807 Msa0660160:intron 25.0%
! CAGTTTAATATCTGATATGT+GGG + chr4_3:70743789-70743808 Msa0660160:intron 25.0%
! AACAAAACTTAAGACTTCAA+TGG - chr4_3:70743937-70743956 None:intergenic 25.0%
!!! ACAAAAGATGATTAGTTTAG+TGG - chr4_3:70743995-70744014 None:intergenic 25.0%
!! TTCTGGTTAAATTCATTTGA+GGG - chr4_3:70744134-70744153 None:intergenic 25.0%
!!! TTTCTGGTTAAATTCATTTG+AGG - chr4_3:70744135-70744154 None:intergenic 25.0%
!! TATCAAATCGTAGTATTTTC+TGG - chr4_3:70744151-70744170 None:intergenic 25.0%
! ACGATTTGATATTGAAATTC+GGG + chr4_3:70744160-70744179 Msa0660160:intron 25.0%
! GACATTCAAAATACAAACAA+TGG - chr4_3:70744616-70744635 None:intergenic 25.0%
!!! GAGAATTTTTAGGTACTTTA+AGG + chr4_3:70740633-70740652 Msa0660160:intron 25.0%
! TGTGTAGTAATTTAGTACTT+AGG + chr4_3:70740921-70740940 Msa0660160:intron 25.0%
! CTGGTTACTATTTATTTAGA+GGG + chr4_3:70741036-70741055 Msa0660160:intron 25.0%
! TGGTTACTATTTATTTAGAG+GGG + chr4_3:70741037-70741056 Msa0660160:intron 25.0%
! ACGATTATAGTTTCATTGTT+TGG + chr4_3:70741126-70741145 Msa0660160:intron 25.0%
!! CAATCAAAATAAGTTGGAAA+AGG - chr4_3:70741210-70741229 None:intergenic 25.0%
!! AATTTGAGACTTAAGTCAAA+TGG + chr4_3:70741335-70741354 Msa0660160:intron 25.0%
! TTATTTCATCTAACCAATGT+GGG - chr4_3:70741420-70741439 None:intergenic 25.0%
! ATTTACAGAACTTATGATAC+TGG - chr4_3:70741761-70741780 None:intergenic 25.0%
! CATGATTCACTTATATTTCT+TGG - chr4_3:70742046-70742065 None:intergenic 25.0%
! TACAAAGATATAATCAAGTC+TGG + chr4_3:70742423-70742442 Msa0660160:CDS 25.0%
!! ATTAAATTACCTTCGCATTT+TGG + chr4_3:70742530-70742549 Msa0660160:intron 25.0%
! TTAATACTTGTTCTCTCTAT+TGG + chr4_3:70742838-70742857 Msa0660160:intron 25.0%
! TAATACTTGTTCTCTCTATT+GGG + chr4_3:70742839-70742858 Msa0660160:intron 25.0%
! TTGATAGATAAGGTTAAACT+TGG - chr4_3:70743033-70743052 None:intergenic 25.0%
! GTATTGTCATATTAAAACCT+GGG - chr4_3:70743125-70743144 None:intergenic 25.0%
!!! CTTTGAAAAGTGAAATTTTG+AGG + chr4_3:70743154-70743173 Msa0660160:intron 25.0%
! CTCTTTATATGTTGTGAAAA+AGG + chr4_3:70743336-70743355 Msa0660160:intron 25.0%
!!! TTGTTGTTTGATATAGTAGT+TGG + chr4_3:70742082-70742101 Msa0660160:intron 25.0%
! TCTATTCACAAATCTCTATT+TGG + chr4_3:70743465-70743484 Msa0660160:intron 25.0%
! AAATGCAATTTAGGTAGATA+AGG - chr4_3:70743493-70743512 None:intergenic 25.0%
! TTAGAAAATCATACCTTTCT+CGG + chr4_3:70743729-70743748 Msa0660160:intron 25.0%
! TCAGTTTAATATCTGATATG+TGG + chr4_3:70743788-70743807 Msa0660160:intron 25.0%
! CAGTTTAATATCTGATATGT+GGG + chr4_3:70743789-70743808 Msa0660160:intron 25.0%
! AACAAAACTTAAGACTTCAA+TGG - chr4_3:70743937-70743956 None:intergenic 25.0%
!!! ACAAAAGATGATTAGTTTAG+TGG - chr4_3:70743995-70744014 None:intergenic 25.0%
!! TTCTGGTTAAATTCATTTGA+GGG - chr4_3:70744134-70744153 None:intergenic 25.0%
!!! TTTCTGGTTAAATTCATTTG+AGG - chr4_3:70744135-70744154 None:intergenic 25.0%
!! TATCAAATCGTAGTATTTTC+TGG - chr4_3:70744151-70744170 None:intergenic 25.0%
! ACGATTTGATATTGAAATTC+GGG + chr4_3:70744160-70744179 Msa0660160:intron 25.0%
! GACATTCAAAATACAAACAA+TGG - chr4_3:70744616-70744635 None:intergenic 25.0%
! AAAGTGATGATGAAGATGAA+TGG + chr4_3:70740111-70740130 Msa0660160:CDS 30.0%
TGATGAAGATGAATGGTAAA+TGG + chr4_3:70740118-70740137 Msa0660160:CDS 30.0%
! TTTAGGTACTTTAAGGAACA+TGG + chr4_3:70740640-70740659 Msa0660160:intron 30.0%
TTCTGTTCTGATAGTACATT+CGG - chr4_3:70740899-70740918 None:intergenic 30.0%
GTAGTAATTTAGTACTTAGG+AGG + chr4_3:70740924-70740943 Msa0660160:intron 30.0%
ACTTAGATTGGAAATTATGC+AGG + chr4_3:70740986-70741005 Msa0660160:intron 30.0%
CCTCTAAATAAATAGTAACC+AGG - chr4_3:70741038-70741057 None:intergenic 30.0%
CCTGGTTACTATTTATTTAG+AGG + chr4_3:70741035-70741054 Msa0660160:intron 30.0%
TTTATTTAGAGGGGAAAACT+TGG + chr4_3:70741046-70741065 Msa0660160:intron 30.0%
TTCCTACTGTATAGTTGAAA+GGG - chr4_3:70741089-70741108 None:intergenic 30.0%
ATTCCTACTGTATAGTTGAA+AGG - chr4_3:70741090-70741109 None:intergenic 30.0%
CTCAAATTCATTCTTCAATG+TGG - chr4_3:70741323-70741342 None:intergenic 30.0%
! GTTATTTCATCTAACCAATG+TGG - chr4_3:70741421-70741440 None:intergenic 30.0%
! AGATGAAATAACAAGTACTG+AGG + chr4_3:70741429-70741448 Msa0660160:intron 30.0%
TTTGCAAATCATACCTTTCT+CGG + chr4_3:70741483-70741502 Msa0660160:intron 30.0%
TGTATTGTAGTGTTAAAAGC+TGG + chr4_3:70741842-70741861 Msa0660160:intron 30.0%
GACATGTTCATGAAAATAGA+TGG - chr4_3:70741940-70741959 None:intergenic 30.0%
!!! AGTCAAAGTTATTTTGAGTG+AGG + chr4_3:70742236-70742255 Msa0660160:intron 30.0%
ACAAGTGTTTGAACTTTCAT+AGG - chr4_3:70742278-70742297 None:intergenic 30.0%
!! CTTGCATAACTAGCTTATTT+TGG + chr4_3:70742310-70742329 Msa0660160:intron 30.0%
AGAGTATGGTGTAATTTCAT+TGG + chr4_3:70742374-70742393 Msa0660160:intron 30.0%
TGTAATTTCATTGGTCATGT+AGG + chr4_3:70742383-70742402 Msa0660160:intron 30.0%
ATTCAGGAATGTGGAATATT+AGG - chr4_3:70742470-70742489 None:intergenic 30.0%
ATCAAGTATAACGGTAAACA+AGG - chr4_3:70742686-70742705 None:intergenic 30.0%
TGTTTACCGTTATACTTGAT+TGG + chr4_3:70742686-70742705 Msa0660160:intron 30.0%
ACCAAACCAATCAAGTATAA+CGG - chr4_3:70742695-70742714 None:intergenic 30.0%
!! TATACTTGATTGGTTTGGTT+CGG + chr4_3:70742696-70742715 Msa0660160:intron 30.0%
CTTTGTCTTGAAAACCTTAT+TGG + chr4_3:70742800-70742819 Msa0660160:CDS 30.0%
GAGAGAACAAGTATTAAAGT+AGG - chr4_3:70742835-70742854 None:intergenic 30.0%
!!! CATCTTATTTTTTCTACTGC+AGG + chr4_3:70742895-70742914 Msa0660160:intron 30.0%
GGTATTGTCATATTAAAACC+TGG - chr4_3:70743126-70743145 None:intergenic 30.0%
!! TCACTTTTCAAAGTTCTTGA+TGG - chr4_3:70743147-70743166 None:intergenic 30.0%
TGTATCAGAGAAAAATTGCT+TGG + chr4_3:70743237-70743256 Msa0660160:CDS 30.0%
TTGTTTCATCTAACCAATGT+GGG - chr4_3:70743668-70743687 None:intergenic 30.0%
AGATGAAACAACAAATACTG+AGG + chr4_3:70743677-70743696 Msa0660160:intron 30.0%
!! GAAAGGTATGATTTTCTAAG+AGG - chr4_3:70743728-70743747 None:intergenic 30.0%
AAACTTAAGACTTCAATGGT+GGG - chr4_3:70743933-70743952 None:intergenic 30.0%
AAAACTTAAGACTTCAATGG+TGG - chr4_3:70743934-70743953 None:intergenic 30.0%
ATTTGATATTGAAATTCGGG+TGG + chr4_3:70744163-70744182 Msa0660160:intron 30.0%
! TTTTGTCTTTGATCGAATGT+AGG + chr4_3:70744215-70744234 Msa0660160:intron 30.0%
TTTATGCAGCTTGAAAGATT+TGG + chr4_3:70744364-70744383 Msa0660160:intron 30.0%
TACTCACATAAACCAATTCA+AGG - chr4_3:70744466-70744485 None:intergenic 30.0%
! AAAGTTTGAGGTTTATCACA+AGG + chr4_3:70744496-70744515 Msa0660160:three_prime_UTR 30.0%
CTCTCATGAATTTACTTTCA+TGG + chr4_3:70744635-70744654 Msa0660160:three_prime_UTR 30.0%
! AAAGTGATGATGAAGATGAA+TGG + chr4_3:70740111-70740130 Msa0660160:CDS 30.0%
TGATGAAGATGAATGGTAAA+TGG + chr4_3:70740118-70740137 Msa0660160:CDS 30.0%
! TTTAGGTACTTTAAGGAACA+TGG + chr4_3:70740640-70740659 Msa0660160:intron 30.0%
TTCTGTTCTGATAGTACATT+CGG - chr4_3:70740899-70740918 None:intergenic 30.0%
GTAGTAATTTAGTACTTAGG+AGG + chr4_3:70740924-70740943 Msa0660160:intron 30.0%
ACTTAGATTGGAAATTATGC+AGG + chr4_3:70740986-70741005 Msa0660160:intron 30.0%
CCTCTAAATAAATAGTAACC+AGG - chr4_3:70741038-70741057 None:intergenic 30.0%
CCTGGTTACTATTTATTTAG+AGG + chr4_3:70741035-70741054 Msa0660160:intron 30.0%
TTTATTTAGAGGGGAAAACT+TGG + chr4_3:70741046-70741065 Msa0660160:intron 30.0%
TTCCTACTGTATAGTTGAAA+GGG - chr4_3:70741089-70741108 None:intergenic 30.0%
ATTCCTACTGTATAGTTGAA+AGG - chr4_3:70741090-70741109 None:intergenic 30.0%
CTCAAATTCATTCTTCAATG+TGG - chr4_3:70741323-70741342 None:intergenic 30.0%
! GTTATTTCATCTAACCAATG+TGG - chr4_3:70741421-70741440 None:intergenic 30.0%
! AGATGAAATAACAAGTACTG+AGG + chr4_3:70741429-70741448 Msa0660160:intron 30.0%
TTTGCAAATCATACCTTTCT+CGG + chr4_3:70741483-70741502 Msa0660160:intron 30.0%
TGTATTGTAGTGTTAAAAGC+TGG + chr4_3:70741842-70741861 Msa0660160:intron 30.0%
GACATGTTCATGAAAATAGA+TGG - chr4_3:70741940-70741959 None:intergenic 30.0%
!!! AGTCAAAGTTATTTTGAGTG+AGG + chr4_3:70742236-70742255 Msa0660160:intron 30.0%
ACAAGTGTTTGAACTTTCAT+AGG - chr4_3:70742278-70742297 None:intergenic 30.0%
!! CTTGCATAACTAGCTTATTT+TGG + chr4_3:70742310-70742329 Msa0660160:intron 30.0%
AGAGTATGGTGTAATTTCAT+TGG + chr4_3:70742374-70742393 Msa0660160:intron 30.0%
TGTAATTTCATTGGTCATGT+AGG + chr4_3:70742383-70742402 Msa0660160:intron 30.0%
ATTCAGGAATGTGGAATATT+AGG - chr4_3:70742470-70742489 None:intergenic 30.0%
ATCAAGTATAACGGTAAACA+AGG - chr4_3:70742686-70742705 None:intergenic 30.0%
TGTTTACCGTTATACTTGAT+TGG + chr4_3:70742686-70742705 Msa0660160:intron 30.0%
ACCAAACCAATCAAGTATAA+CGG - chr4_3:70742695-70742714 None:intergenic 30.0%
!! TATACTTGATTGGTTTGGTT+CGG + chr4_3:70742696-70742715 Msa0660160:intron 30.0%
CTTTGTCTTGAAAACCTTAT+TGG + chr4_3:70742800-70742819 Msa0660160:CDS 30.0%
GAGAGAACAAGTATTAAAGT+AGG - chr4_3:70742835-70742854 None:intergenic 30.0%
!!! CATCTTATTTTTTCTACTGC+AGG + chr4_3:70742895-70742914 Msa0660160:intron 30.0%
GGTATTGTCATATTAAAACC+TGG - chr4_3:70743126-70743145 None:intergenic 30.0%
!! TCACTTTTCAAAGTTCTTGA+TGG - chr4_3:70743147-70743166 None:intergenic 30.0%
TGTATCAGAGAAAAATTGCT+TGG + chr4_3:70743237-70743256 Msa0660160:CDS 30.0%
TTGTTTCATCTAACCAATGT+GGG - chr4_3:70743668-70743687 None:intergenic 30.0%
AGATGAAACAACAAATACTG+AGG + chr4_3:70743677-70743696 Msa0660160:intron 30.0%
!! GAAAGGTATGATTTTCTAAG+AGG - chr4_3:70743728-70743747 None:intergenic 30.0%
AAACTTAAGACTTCAATGGT+GGG - chr4_3:70743933-70743952 None:intergenic 30.0%
AAAACTTAAGACTTCAATGG+TGG - chr4_3:70743934-70743953 None:intergenic 30.0%
ATTTGATATTGAAATTCGGG+TGG + chr4_3:70744163-70744182 Msa0660160:intron 30.0%
! TTTTGTCTTTGATCGAATGT+AGG + chr4_3:70744215-70744234 Msa0660160:intron 30.0%
TTTATGCAGCTTGAAAGATT+TGG + chr4_3:70744364-70744383 Msa0660160:intron 30.0%
TACTCACATAAACCAATTCA+AGG - chr4_3:70744466-70744485 None:intergenic 30.0%
! AAAGTTTGAGGTTTATCACA+AGG + chr4_3:70744496-70744515 Msa0660160:three_prime_UTR 30.0%
CTCTCATGAATTTACTTTCA+TGG + chr4_3:70744635-70744654 Msa0660160:three_prime_UTR 30.0%
! ATCACTCTCTATGTTTTGTG+TGG - chr4_3:70740087-70740106 None:intergenic 35.0%
GCTCTTATATTTGACTGTGA+CGG + chr4_3:70740342-70740361 Msa0660160:CDS 35.0%
AATTCTATATCCCAGTTGAG+TGG - chr4_3:70740459-70740478 None:intergenic 35.0%
GATCAACTTCAGAACCAAAT+TGG + chr4_3:70740483-70740502 Msa0660160:CDS 35.0%
! GTTTCGAATAACGTTGATGA+AGG - chr4_3:70740670-70740689 None:intergenic 35.0%
GTCTTATGTCAAACACACAT+CGG - chr4_3:70740841-70740860 None:intergenic 35.0%
ATGGGAAACATGGTAATTAG+TGG - chr4_3:70740951-70740970 None:intergenic 35.0%
AGTCTCATCCTATGAACAAT+GGG - chr4_3:70740969-70740988 None:intergenic 35.0%
AAGTCTCATCCTATGAACAA+TGG - chr4_3:70740970-70740989 None:intergenic 35.0%
TCATAGGATGAGACTTAGAT+TGG + chr4_3:70740974-70740993 Msa0660160:intron 35.0%
TCCTACTGTATAGTTGAAAG+GGG - chr4_3:70741088-70741107 None:intergenic 35.0%
ATGAGTTATATGTCCCACAT+TGG + chr4_3:70741404-70741423 Msa0660160:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG - chr4_3:70741509-70741528 None:intergenic 35.0%
ATATCTGATATGTGAGCCAA+TGG + chr4_3:70741550-70741569 Msa0660160:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG - chr4_3:70741569-70741588 None:intergenic 35.0%
GAAGTTGGGATGAGATTATT+TGG + chr4_3:70741791-70741810 Msa0660160:intron 35.0%
!!! AGCATGGAAGTTTTGAACTT+GGG + chr4_3:70741814-70741833 Msa0660160:intron 35.0%
CTCTTGAATAACTGTAAACC+TGG + chr4_3:70741878-70741897 Msa0660160:intron 35.0%
TAGGTTTACAATTGCTAACC+AGG - chr4_3:70741899-70741918 None:intergenic 35.0%
GTTCATTTGAGTGTGAAAGT+AGG - chr4_3:70741918-70741937 None:intergenic 35.0%
! GGGATTCAAATTGTTAGTCT+TGG - chr4_3:70741976-70741995 None:intergenic 35.0%
! GTTGATTCCATATGACATGA+AGG + chr4_3:70742193-70742212 Msa0660160:intron 35.0%
GTTGTATCCTTCATGTCATA+TGG - chr4_3:70742203-70742222 None:intergenic 35.0%
ATTACACCATACTCTAAGTG+AGG - chr4_3:70742369-70742388 None:intergenic 35.0%
TTTCATTGGTCATGTAGGAT+TGG + chr4_3:70742388-70742407 Msa0660160:intron 35.0%
AAATACCACCTTCACAATTC+AGG - chr4_3:70742486-70742505 None:intergenic 35.0%
AATTTCAAAACTCCTGGTCT+AGG - chr4_3:70742567-70742586 None:intergenic 35.0%
!!! ACCAGGAGTTTTGAAATTGA+TGG + chr4_3:70742569-70742588 Msa0660160:CDS 35.0%
TCCATCAATTTCAAAACTCC+TGG - chr4_3:70742573-70742592 None:intergenic 35.0%
AAATAATCGTACAGCATCTC+TGG - chr4_3:70742601-70742620 None:intergenic 35.0%
GATGCTGTACGATTATTTAC+CGG + chr4_3:70742603-70742622 Msa0660160:intron 35.0%
! ACCGTTATACTTGATTGGTT+TGG + chr4_3:70742691-70742710 Msa0660160:intron 35.0%
! TTTTGCTCAATTACTGATGC+AGG + chr4_3:70742730-70742749 Msa0660160:intron 35.0%
TTTGCTCAATTACTGATGCA+GGG + chr4_3:70742731-70742750 Msa0660160:intron 35.0%
GTAGGCTTACAATTCCAATA+AGG - chr4_3:70742817-70742836 None:intergenic 35.0%
!! ACTTTAAGGTGATGATGTGA+AGG + chr4_3:70743063-70743082 Msa0660160:intron 35.0%
AAGCAGTCACATATATTGAC+GGG - chr4_3:70743102-70743121 None:intergenic 35.0%
GAAGCAGTCACATATATTGA+CGG - chr4_3:70743103-70743122 None:intergenic 35.0%
ATATTGTGCATTGCAGAAGT+TGG + chr4_3:70743213-70743232 Msa0660160:intron 35.0%
TATTGTGCATTGCAGAAGTT+GGG + chr4_3:70743214-70743233 Msa0660160:intron 35.0%
ATCAGAGAAAAATTGCTTGG+TGG + chr4_3:70743240-70743259 Msa0660160:CDS 35.0%
!! GGATAGTGTTATTGGTTTAC+AGG + chr4_3:70743267-70743286 Msa0660160:CDS 35.0%
AGCTTGTGTTAGAAAGTTAG+AGG + chr4_3:70743384-70743403 Msa0660160:intron 35.0%
GCTTGTGTTAGAAAGTTAGA+GGG + chr4_3:70743385-70743404 Msa0660160:intron 35.0%
! GTTGTTTCATCTAACCAATG+TGG - chr4_3:70743669-70743688 None:intergenic 35.0%
!! GGTATGATTTTCTAAGAGGA+TGG - chr4_3:70743724-70743743 None:intergenic 35.0%
TACACTTGATCTTAGCCAAA+AGG - chr4_3:70741509-70741528 None:intergenic 35.0%
TTTAATATCGTGTGGACCAT+TGG - chr4_3:70741569-70741588 None:intergenic 35.0%
ATTTATTTATTGAGGGGGAG+AGG + chr4_3:70743834-70743853 Msa0660160:intron 35.0%
AACTTAAGACTTCAATGGTG+GGG - chr4_3:70743932-70743951 None:intergenic 35.0%
!! TGCTGAACACTGTTTCTATT+AGG + chr4_3:70744301-70744320 Msa0660160:intron 35.0%
TTGGTTTATGTGAGTAAAGC+CGG + chr4_3:70744470-70744489 Msa0660160:three_prime_UTR 35.0%
ATAAACCTCAAACTTTCGAC+CGG - chr4_3:70744492-70744511 None:intergenic 35.0%
! ATCACTCTCTATGTTTTGTG+TGG - chr4_3:70740087-70740106 None:intergenic 35.0%
GCTCTTATATTTGACTGTGA+CGG + chr4_3:70740342-70740361 Msa0660160:CDS 35.0%
AATTCTATATCCCAGTTGAG+TGG - chr4_3:70740459-70740478 None:intergenic 35.0%
GATCAACTTCAGAACCAAAT+TGG + chr4_3:70740483-70740502 Msa0660160:CDS 35.0%
! GTTTCGAATAACGTTGATGA+AGG - chr4_3:70740670-70740689 None:intergenic 35.0%
GTCTTATGTCAAACACACAT+CGG - chr4_3:70740841-70740860 None:intergenic 35.0%
ATGGGAAACATGGTAATTAG+TGG - chr4_3:70740951-70740970 None:intergenic 35.0%
AGTCTCATCCTATGAACAAT+GGG - chr4_3:70740969-70740988 None:intergenic 35.0%
AAGTCTCATCCTATGAACAA+TGG - chr4_3:70740970-70740989 None:intergenic 35.0%
TCATAGGATGAGACTTAGAT+TGG + chr4_3:70740974-70740993 Msa0660160:intron 35.0%
TCCTACTGTATAGTTGAAAG+GGG - chr4_3:70741088-70741107 None:intergenic 35.0%
ATGAGTTATATGTCCCACAT+TGG + chr4_3:70741404-70741423 Msa0660160:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG - chr4_3:70741509-70741528 None:intergenic 35.0%
ATATCTGATATGTGAGCCAA+TGG + chr4_3:70741550-70741569 Msa0660160:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG - chr4_3:70741569-70741588 None:intergenic 35.0%
GAAGTTGGGATGAGATTATT+TGG + chr4_3:70741791-70741810 Msa0660160:intron 35.0%
!!! AGCATGGAAGTTTTGAACTT+GGG + chr4_3:70741814-70741833 Msa0660160:intron 35.0%
CTCTTGAATAACTGTAAACC+TGG + chr4_3:70741878-70741897 Msa0660160:intron 35.0%
TAGGTTTACAATTGCTAACC+AGG - chr4_3:70741899-70741918 None:intergenic 35.0%
GTTCATTTGAGTGTGAAAGT+AGG - chr4_3:70741918-70741937 None:intergenic 35.0%
! GGGATTCAAATTGTTAGTCT+TGG - chr4_3:70741976-70741995 None:intergenic 35.0%
! GTTGATTCCATATGACATGA+AGG + chr4_3:70742193-70742212 Msa0660160:intron 35.0%
GTTGTATCCTTCATGTCATA+TGG - chr4_3:70742203-70742222 None:intergenic 35.0%
ATTACACCATACTCTAAGTG+AGG - chr4_3:70742369-70742388 None:intergenic 35.0%
TTTCATTGGTCATGTAGGAT+TGG + chr4_3:70742388-70742407 Msa0660160:intron 35.0%
AAATACCACCTTCACAATTC+AGG - chr4_3:70742486-70742505 None:intergenic 35.0%
AATTTCAAAACTCCTGGTCT+AGG - chr4_3:70742567-70742586 None:intergenic 35.0%
!!! ACCAGGAGTTTTGAAATTGA+TGG + chr4_3:70742569-70742588 Msa0660160:CDS 35.0%
TCCATCAATTTCAAAACTCC+TGG - chr4_3:70742573-70742592 None:intergenic 35.0%
AAATAATCGTACAGCATCTC+TGG - chr4_3:70742601-70742620 None:intergenic 35.0%
GATGCTGTACGATTATTTAC+CGG + chr4_3:70742603-70742622 Msa0660160:intron 35.0%
! ACCGTTATACTTGATTGGTT+TGG + chr4_3:70742691-70742710 Msa0660160:intron 35.0%
! TTTTGCTCAATTACTGATGC+AGG + chr4_3:70742730-70742749 Msa0660160:intron 35.0%
TTTGCTCAATTACTGATGCA+GGG + chr4_3:70742731-70742750 Msa0660160:intron 35.0%
GTAGGCTTACAATTCCAATA+AGG - chr4_3:70742817-70742836 None:intergenic 35.0%
!! ACTTTAAGGTGATGATGTGA+AGG + chr4_3:70743063-70743082 Msa0660160:intron 35.0%
AAGCAGTCACATATATTGAC+GGG - chr4_3:70743102-70743121 None:intergenic 35.0%
GAAGCAGTCACATATATTGA+CGG - chr4_3:70743103-70743122 None:intergenic 35.0%
ATATTGTGCATTGCAGAAGT+TGG + chr4_3:70743213-70743232 Msa0660160:intron 35.0%
TATTGTGCATTGCAGAAGTT+GGG + chr4_3:70743214-70743233 Msa0660160:intron 35.0%
ATCAGAGAAAAATTGCTTGG+TGG + chr4_3:70743240-70743259 Msa0660160:CDS 35.0%
!! GGATAGTGTTATTGGTTTAC+AGG + chr4_3:70743267-70743286 Msa0660160:CDS 35.0%
AGCTTGTGTTAGAAAGTTAG+AGG + chr4_3:70743384-70743403 Msa0660160:intron 35.0%
GCTTGTGTTAGAAAGTTAGA+GGG + chr4_3:70743385-70743404 Msa0660160:intron 35.0%
! GTTGTTTCATCTAACCAATG+TGG - chr4_3:70743669-70743688 None:intergenic 35.0%
!! GGTATGATTTTCTAAGAGGA+TGG - chr4_3:70743724-70743743 None:intergenic 35.0%
TACACTTGATCTTAGCCAAA+AGG - chr4_3:70741509-70741528 None:intergenic 35.0%
TTTAATATCGTGTGGACCAT+TGG - chr4_3:70741569-70741588 None:intergenic 35.0%
ATTTATTTATTGAGGGGGAG+AGG + chr4_3:70743834-70743853 Msa0660160:intron 35.0%
AACTTAAGACTTCAATGGTG+GGG - chr4_3:70743932-70743951 None:intergenic 35.0%
!! TGCTGAACACTGTTTCTATT+AGG + chr4_3:70744301-70744320 Msa0660160:intron 35.0%
TTGGTTTATGTGAGTAAAGC+CGG + chr4_3:70744470-70744489 Msa0660160:three_prime_UTR 35.0%
ATAAACCTCAAACTTTCGAC+CGG - chr4_3:70744492-70744511 None:intergenic 35.0%
!! ATGGTTGATGAACATGACCA+TGG + chr4_3:70740137-70740156 Msa0660160:CDS 40.0%
! ACGAAAACAGTGTCTGGTTT+GGG - chr4_3:70740220-70740239 None:intergenic 40.0%
AACGAAAACAGTGTCTGGTT+TGG - chr4_3:70740221-70740240 None:intergenic 40.0%
TGGATAACGAAAACAGTGTC+TGG - chr4_3:70740226-70740245 None:intergenic 40.0%
! CTGAGACTTTAAAGAAGACG+CGG - chr4_3:70740293-70740312 None:intergenic 40.0%
CAACTTCAGAACCAAATTGG+TGG + chr4_3:70740486-70740505 Msa0660160:CDS 40.0%
! GAAAGGAACCATCGCATTTT+GGG - chr4_3:70740519-70740538 None:intergenic 40.0%
! AGAAAGGAACCATCGCATTT+TGG - chr4_3:70740520-70740539 None:intergenic 40.0%
! GGTACTTTAAGGAACATGGA+TGG + chr4_3:70740644-70740663 Msa0660160:intron 40.0%
AACTCCTCCTACAATTGATG+AGG + chr4_3:70740687-70740706 Msa0660160:CDS 40.0%
!! CTGAAGAGTGTCAATCAACT+TGG - chr4_3:70740719-70740738 None:intergenic 40.0%
!! CAAGTTGATTGACACTCTTC+AGG + chr4_3:70740717-70740736 Msa0660160:CDS 40.0%
TCCACTGTGTAAGTGTATAG+TGG - chr4_3:70740801-70740820 None:intergenic 40.0%
GCACTAACACTTCAGATTGA+AGG - chr4_3:70740867-70740886 None:intergenic 40.0%
CCTATGAACAATGGGAAACA+TGG - chr4_3:70740961-70740980 None:intergenic 40.0%
CCATGTTTCCCATTGTTCAT+AGG + chr4_3:70740958-70740977 Msa0660160:intron 40.0%
! TTGACTAAACTTGCTTGTCC+TGG + chr4_3:70741017-70741036 Msa0660160:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG - chr4_3:70741288-70741307 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG - chr4_3:70741289-70741308 None:intergenic 40.0%
TGTTGCCTCACTTAAGAGTA+TGG + chr4_3:70741295-70741314 Msa0660160:intron 40.0%
AAGTCAAATGGTAGCTGCAT+TGG + chr4_3:70741347-70741366 Msa0660160:intron 40.0%
!! CACCACAATAGCTTGCTATT+GGG + chr4_3:70741612-70741631 Msa0660160:intron 40.0%
! GGATGAGATTATTTGGAGCA+TGG + chr4_3:70741798-70741817 Msa0660160:intron 40.0%
!!! GAGCATGGAAGTTTTGAACT+TGG + chr4_3:70741813-70741832 Msa0660160:intron 40.0%
GTAGTGTTAAAAGCTGGACT+TGG + chr4_3:70741848-70741867 Msa0660160:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG - chr4_3:70741288-70741307 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG - chr4_3:70741289-70741308 None:intergenic 40.0%
TTGTTGCCTCACTTAGAGTA+TGG + chr4_3:70742360-70742379 Msa0660160:intron 40.0%
GGAATGTGGAATATTAGGAG+AGG - chr4_3:70742465-70742484 None:intergenic 40.0%
TCCACATTCCTGAATTGTGA+AGG + chr4_3:70742475-70742494 Msa0660160:intron 40.0%
ACCTTCACAATTCAGGAATG+TGG - chr4_3:70742479-70742498 None:intergenic 40.0%
ACATTCCTGAATTGTGAAGG+TGG + chr4_3:70742478-70742497 Msa0660160:intron 40.0%
TTGCTCAATTACTGATGCAG+GGG + chr4_3:70742732-70742751 Msa0660160:intron 40.0%
TTGTTCTCTCTATTGGGAGT+AGG + chr4_3:70742845-70742864 Msa0660160:intron 40.0%
TGTTTCCTGCTCATGAGTTT+AGG + chr4_3:70743006-70743025 Msa0660160:intron 40.0%
! AGTCACATATATTGACGGGT+CGG - chr4_3:70743098-70743117 None:intergenic 40.0%
AATATATGTGACTGCTTCCC+AGG + chr4_3:70743105-70743124 Msa0660160:CDS 40.0%
! GAAAAATTGCTTGGTGGTAG+AGG + chr4_3:70743246-70743265 Msa0660160:CDS 40.0%
GTGGTAGAGGATAGTGTTAT+TGG + chr4_3:70743259-70743278 Msa0660160:CDS 40.0%
TGTTAGAAAGTTAGAGGGCA+AGG + chr4_3:70743390-70743409 Msa0660160:intron 40.0%
! AATCCTGACTTTGTTGACTG+TGG + chr4_3:70743533-70743552 Msa0660160:intron 40.0%
TAACCACAGTCAACAAAGTC+AGG - chr4_3:70743539-70743558 None:intergenic 40.0%
TTAAGCGCATTCATCATCCA+AGG + chr4_3:70743556-70743575 Msa0660160:intron 40.0%
GAAGCGTGAATCATTAGACT+TGG + chr4_3:70743582-70743601 Msa0660160:intron 40.0%
CGTGAATCATTAGACTTGGA+TGG + chr4_3:70743586-70743605 Msa0660160:intron 40.0%
ATGAGTTCTATGTCCCACAT+TGG + chr4_3:70743652-70743671 Msa0660160:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG + chr4_3:70743796-70743815 Msa0660160:intron 40.0%
ATTGCTATAGTGCAACGCAA+AGG - chr4_3:70743898-70743917 None:intergenic 40.0%
TTTGCGTTGCACTATAGCAA+TGG + chr4_3:70743897-70743916 Msa0660160:intron 40.0%
TGAAATTCGGGTGGAAAAAC+TGG + chr4_3:70744172-70744191 Msa0660160:intron 40.0%
ACCTTACGTTACTCAAGTCA+GGG - chr4_3:70744266-70744285 None:intergenic 40.0%
TACCTTACGTTACTCAAGTC+AGG - chr4_3:70744267-70744286 None:intergenic 40.0%
!! ATGGTTGATGAACATGACCA+TGG + chr4_3:70740137-70740156 Msa0660160:CDS 40.0%
! ACGAAAACAGTGTCTGGTTT+GGG - chr4_3:70740220-70740239 None:intergenic 40.0%
AACGAAAACAGTGTCTGGTT+TGG - chr4_3:70740221-70740240 None:intergenic 40.0%
TGGATAACGAAAACAGTGTC+TGG - chr4_3:70740226-70740245 None:intergenic 40.0%
! CTGAGACTTTAAAGAAGACG+CGG - chr4_3:70740293-70740312 None:intergenic 40.0%
CAACTTCAGAACCAAATTGG+TGG + chr4_3:70740486-70740505 Msa0660160:CDS 40.0%
! GAAAGGAACCATCGCATTTT+GGG - chr4_3:70740519-70740538 None:intergenic 40.0%
! AGAAAGGAACCATCGCATTT+TGG - chr4_3:70740520-70740539 None:intergenic 40.0%
! GGTACTTTAAGGAACATGGA+TGG + chr4_3:70740644-70740663 Msa0660160:intron 40.0%
AACTCCTCCTACAATTGATG+AGG + chr4_3:70740687-70740706 Msa0660160:CDS 40.0%
!! CTGAAGAGTGTCAATCAACT+TGG - chr4_3:70740719-70740738 None:intergenic 40.0%
!! CAAGTTGATTGACACTCTTC+AGG + chr4_3:70740717-70740736 Msa0660160:CDS 40.0%
TCCACTGTGTAAGTGTATAG+TGG - chr4_3:70740801-70740820 None:intergenic 40.0%
GCACTAACACTTCAGATTGA+AGG - chr4_3:70740867-70740886 None:intergenic 40.0%
CCTATGAACAATGGGAAACA+TGG - chr4_3:70740961-70740980 None:intergenic 40.0%
CCATGTTTCCCATTGTTCAT+AGG + chr4_3:70740958-70740977 Msa0660160:intron 40.0%
! TTGACTAAACTTGCTTGTCC+TGG + chr4_3:70741017-70741036 Msa0660160:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG - chr4_3:70741288-70741307 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG - chr4_3:70741289-70741308 None:intergenic 40.0%
TGTTGCCTCACTTAAGAGTA+TGG + chr4_3:70741295-70741314 Msa0660160:intron 40.0%
AAGTCAAATGGTAGCTGCAT+TGG + chr4_3:70741347-70741366 Msa0660160:intron 40.0%
!! CACCACAATAGCTTGCTATT+GGG + chr4_3:70741612-70741631 Msa0660160:intron 40.0%
! GGATGAGATTATTTGGAGCA+TGG + chr4_3:70741798-70741817 Msa0660160:intron 40.0%
!!! GAGCATGGAAGTTTTGAACT+TGG + chr4_3:70741813-70741832 Msa0660160:intron 40.0%
GTAGTGTTAAAAGCTGGACT+TGG + chr4_3:70741848-70741867 Msa0660160:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG - chr4_3:70741288-70741307 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG - chr4_3:70741289-70741308 None:intergenic 40.0%
TTGTTGCCTCACTTAGAGTA+TGG + chr4_3:70742360-70742379 Msa0660160:intron 40.0%
GGAATGTGGAATATTAGGAG+AGG - chr4_3:70742465-70742484 None:intergenic 40.0%
TCCACATTCCTGAATTGTGA+AGG + chr4_3:70742475-70742494 Msa0660160:intron 40.0%
ACCTTCACAATTCAGGAATG+TGG - chr4_3:70742479-70742498 None:intergenic 40.0%
ACATTCCTGAATTGTGAAGG+TGG + chr4_3:70742478-70742497 Msa0660160:intron 40.0%
TTGCTCAATTACTGATGCAG+GGG + chr4_3:70742732-70742751 Msa0660160:intron 40.0%
TTGTTCTCTCTATTGGGAGT+AGG + chr4_3:70742845-70742864 Msa0660160:intron 40.0%
TGTTTCCTGCTCATGAGTTT+AGG + chr4_3:70743006-70743025 Msa0660160:intron 40.0%
! AGTCACATATATTGACGGGT+CGG - chr4_3:70743098-70743117 None:intergenic 40.0%
AATATATGTGACTGCTTCCC+AGG + chr4_3:70743105-70743124 Msa0660160:CDS 40.0%
! GAAAAATTGCTTGGTGGTAG+AGG + chr4_3:70743246-70743265 Msa0660160:CDS 40.0%
GTGGTAGAGGATAGTGTTAT+TGG + chr4_3:70743259-70743278 Msa0660160:CDS 40.0%
TGTTAGAAAGTTAGAGGGCA+AGG + chr4_3:70743390-70743409 Msa0660160:intron 40.0%
! AATCCTGACTTTGTTGACTG+TGG + chr4_3:70743533-70743552 Msa0660160:intron 40.0%
TAACCACAGTCAACAAAGTC+AGG - chr4_3:70743539-70743558 None:intergenic 40.0%
TTAAGCGCATTCATCATCCA+AGG + chr4_3:70743556-70743575 Msa0660160:intron 40.0%
GAAGCGTGAATCATTAGACT+TGG + chr4_3:70743582-70743601 Msa0660160:intron 40.0%
CGTGAATCATTAGACTTGGA+TGG + chr4_3:70743586-70743605 Msa0660160:intron 40.0%
ATGAGTTCTATGTCCCACAT+TGG + chr4_3:70743652-70743671 Msa0660160:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG + chr4_3:70743796-70743815 Msa0660160:intron 40.0%
ATTGCTATAGTGCAACGCAA+AGG - chr4_3:70743898-70743917 None:intergenic 40.0%
TTTGCGTTGCACTATAGCAA+TGG + chr4_3:70743897-70743916 Msa0660160:intron 40.0%
TGAAATTCGGGTGGAAAAAC+TGG + chr4_3:70744172-70744191 Msa0660160:intron 40.0%
ACCTTACGTTACTCAAGTCA+GGG - chr4_3:70744266-70744285 None:intergenic 40.0%
TACCTTACGTTACTCAAGTC+AGG - chr4_3:70744267-70744286 None:intergenic 40.0%
AGATAGGAATGGGAAGTGGA+GGG - chr4_3:70740195-70740214 None:intergenic 45.0%
GGTTTGGGAGAGATAGGAAT+GGG - chr4_3:70740205-70740224 None:intergenic 45.0%
! TGGTTTGGGAGAGATAGGAA+TGG - chr4_3:70740206-70740225 None:intergenic 45.0%
AGAAGACGCGGTGGTTATTA+CGG - chr4_3:70740281-70740300 None:intergenic 45.0%
! AGACTTTAAAGAAGACGCGG+TGG - chr4_3:70740290-70740309 None:intergenic 45.0%
ATCTGAGCACTTACATCGTC+AGG + chr4_3:70740377-70740396 Msa0660160:CDS 45.0%
AGTGGTTGAGGAGAAGAAGA+TGG - chr4_3:70740441-70740460 None:intergenic 45.0%
TTCTCCTCAACCACTCAACT+GGG + chr4_3:70740446-70740465 Msa0660160:CDS 45.0%
ATATCCCAGTTGAGTGGTTG+AGG - chr4_3:70740453-70740472 None:intergenic 45.0%
CTTCAGAACCAAATTGGTGG+TGG + chr4_3:70740489-70740508 Msa0660160:CDS 45.0%
CGTTCCTCATCAATTGTAGG+AGG - chr4_3:70740694-70740713 None:intergenic 45.0%
GCTCGTTCCTCATCAATTGT+AGG - chr4_3:70740697-70740716 None:intergenic 45.0%
GCCACTATACACTTACACAG+TGG + chr4_3:70740797-70740816 Msa0660160:intron 45.0%
! GTCAAACACACATCGGTGTT+TGG - chr4_3:70740834-70740853 None:intergenic 45.0%
GCCCCTTTCAACTATACAGT+AGG + chr4_3:70741084-70741103 Msa0660160:intron 45.0%
TGGCACCATACTCTTAAGTG+AGG - chr4_3:70741303-70741322 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG + chr4_3:70741491-70741510 Msa0660160:intron 45.0%
CCAATAGCAAGCTATTGTGG+TGG - chr4_3:70741614-70741633 None:intergenic 45.0%
!! CCACCACAATAGCTTGCTAT+TGG + chr4_3:70741611-70741630 Msa0660160:intron 45.0%
GACCCAATAGCAAGCTATTG+TGG - chr4_3:70741617-70741636 None:intergenic 45.0%
GTTGCACTATTGCAATTGCC+TGG + chr4_3:70741656-70741675 Msa0660160:intron 45.0%
!! TTACCTTCGCATTTTGGCAC+AGG + chr4_3:70742536-70742555 Msa0660160:intron 45.0%
TTACCTGTGCCAAAATGCGA+AGG - chr4_3:70742542-70742561 None:intergenic 45.0%
TACCAGCAAGGAAGCAATCA+AGG - chr4_3:70742934-70742953 None:intergenic 45.0%
GTGATGTGCATATACCAGCA+AGG - chr4_3:70742946-70742965 None:intergenic 45.0%
TTGGTCCTAAACTCATGAGC+AGG - chr4_3:70743014-70743033 None:intergenic 45.0%
! GTCACATATATTGACGGGTC+GGG - chr4_3:70743097-70743116 None:intergenic 45.0%
ATGATTCACGCTTCAAGCCT+TGG - chr4_3:70743576-70743595 None:intergenic 45.0%
GACTTGGATGGTTTCTGCAT+TGG + chr4_3:70743598-70743617 Msa0660160:intron 45.0%
! TCATACCTTTCTCGGCCTTT+TGG + chr4_3:70741491-70741510 Msa0660160:intron 45.0%
!! CACCATGGTAGCTTGCTATT+GGG + chr4_3:70743858-70743877 Msa0660160:intron 45.0%
TGGCTGCATGATGACATAAC+TGG + chr4_3:70744192-70744211 Msa0660160:intron 45.0%
CAAGTCAGGGTAGATTGCTA+TGG - chr4_3:70744253-70744272 None:intergenic 45.0%
! ACCCTGACTTGAGTAACGTA+AGG + chr4_3:70744262-70744281 Msa0660160:CDS 45.0%
TAAAGCCGGTCGAAAGTTTG+AGG + chr4_3:70744484-70744503 Msa0660160:three_prime_UTR 45.0%
AGATAGGAATGGGAAGTGGA+GGG - chr4_3:70740195-70740214 None:intergenic 45.0%
GGTTTGGGAGAGATAGGAAT+GGG - chr4_3:70740205-70740224 None:intergenic 45.0%
! TGGTTTGGGAGAGATAGGAA+TGG - chr4_3:70740206-70740225 None:intergenic 45.0%
AGAAGACGCGGTGGTTATTA+CGG - chr4_3:70740281-70740300 None:intergenic 45.0%
! AGACTTTAAAGAAGACGCGG+TGG - chr4_3:70740290-70740309 None:intergenic 45.0%
ATCTGAGCACTTACATCGTC+AGG + chr4_3:70740377-70740396 Msa0660160:CDS 45.0%
AGTGGTTGAGGAGAAGAAGA+TGG - chr4_3:70740441-70740460 None:intergenic 45.0%
TTCTCCTCAACCACTCAACT+GGG + chr4_3:70740446-70740465 Msa0660160:CDS 45.0%
ATATCCCAGTTGAGTGGTTG+AGG - chr4_3:70740453-70740472 None:intergenic 45.0%
CTTCAGAACCAAATTGGTGG+TGG + chr4_3:70740489-70740508 Msa0660160:CDS 45.0%
CGTTCCTCATCAATTGTAGG+AGG - chr4_3:70740694-70740713 None:intergenic 45.0%
GCTCGTTCCTCATCAATTGT+AGG - chr4_3:70740697-70740716 None:intergenic 45.0%
GCCACTATACACTTACACAG+TGG + chr4_3:70740797-70740816 Msa0660160:intron 45.0%
! GTCAAACACACATCGGTGTT+TGG - chr4_3:70740834-70740853 None:intergenic 45.0%
GCCCCTTTCAACTATACAGT+AGG + chr4_3:70741084-70741103 Msa0660160:intron 45.0%
TGGCACCATACTCTTAAGTG+AGG - chr4_3:70741303-70741322 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG + chr4_3:70741491-70741510 Msa0660160:intron 45.0%
CCAATAGCAAGCTATTGTGG+TGG - chr4_3:70741614-70741633 None:intergenic 45.0%
!! CCACCACAATAGCTTGCTAT+TGG + chr4_3:70741611-70741630 Msa0660160:intron 45.0%
GACCCAATAGCAAGCTATTG+TGG - chr4_3:70741617-70741636 None:intergenic 45.0%
GTTGCACTATTGCAATTGCC+TGG + chr4_3:70741656-70741675 Msa0660160:intron 45.0%
!! TTACCTTCGCATTTTGGCAC+AGG + chr4_3:70742536-70742555 Msa0660160:intron 45.0%
TTACCTGTGCCAAAATGCGA+AGG - chr4_3:70742542-70742561 None:intergenic 45.0%
TACCAGCAAGGAAGCAATCA+AGG - chr4_3:70742934-70742953 None:intergenic 45.0%
GTGATGTGCATATACCAGCA+AGG - chr4_3:70742946-70742965 None:intergenic 45.0%
TTGGTCCTAAACTCATGAGC+AGG - chr4_3:70743014-70743033 None:intergenic 45.0%
! GTCACATATATTGACGGGTC+GGG - chr4_3:70743097-70743116 None:intergenic 45.0%
ATGATTCACGCTTCAAGCCT+TGG - chr4_3:70743576-70743595 None:intergenic 45.0%
GACTTGGATGGTTTCTGCAT+TGG + chr4_3:70743598-70743617 Msa0660160:intron 45.0%
! TCATACCTTTCTCGGCCTTT+TGG + chr4_3:70741491-70741510 Msa0660160:intron 45.0%
!! CACCATGGTAGCTTGCTATT+GGG + chr4_3:70743858-70743877 Msa0660160:intron 45.0%
TGGCTGCATGATGACATAAC+TGG + chr4_3:70744192-70744211 Msa0660160:intron 45.0%
CAAGTCAGGGTAGATTGCTA+TGG - chr4_3:70744253-70744272 None:intergenic 45.0%
! ACCCTGACTTGAGTAACGTA+AGG + chr4_3:70744262-70744281 Msa0660160:CDS 45.0%
TAAAGCCGGTCGAAAGTTTG+AGG + chr4_3:70744484-70744503 Msa0660160:three_prime_UTR 45.0%
!!! ATATTAAATTTATTTTTTGA+GGG + chr4_3:70741581-70741600 Msa0660160:intron 5.0%
!! ATATTAAATTTATTTATTGA+GGG + chr4_3:70743827-70743846 Msa0660160:intron 5.0%
!!! ATATTAAATTTATTTTTTGA+GGG + chr4_3:70741581-70741600 Msa0660160:intron 5.0%
!! ATATTAAATTTATTTATTGA+GGG + chr4_3:70743827-70743846 Msa0660160:intron 5.0%
GTGAGTGAGAGTAGAAGCCA+TGG - chr4_3:70740157-70740176 None:intergenic 50.0%
GAGATAGGAATGGGAAGTGG+AGG - chr4_3:70740196-70740215 None:intergenic 50.0%
GGAGAGATAGGAATGGGAAG+TGG - chr4_3:70740199-70740218 None:intergenic 50.0%
!! GTGTCTGGTTTGGGAGAGAT+AGG - chr4_3:70740211-70740230 None:intergenic 50.0%
CTTCTCCTCAACCACTCAAC+TGG + chr4_3:70740445-70740464 Msa0660160:CDS 50.0%
TGGGTTTGCCACCACCAATT+TGG - chr4_3:70740500-70740519 None:intergenic 50.0%
GTGGCAAACCCAAAATGCGA+TGG + chr4_3:70740508-70740527 Msa0660160:CDS 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG - chr4_3:70741499-70741518 None:intergenic 50.0%
GCACAGGTAAAACCTAGACC+AGG + chr4_3:70742552-70742571 Msa0660160:intron 50.0%
AGCCTTGATTGCTTCCTTGC+TGG + chr4_3:70742929-70742948 Msa0660160:CDS 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG - chr4_3:70741499-70741518 None:intergenic 50.0%
CCAATAGCAAGCTACCATGG+TGG - chr4_3:70743860-70743879 None:intergenic 50.0%
!! CCACCATGGTAGCTTGCTAT+TGG + chr4_3:70743857-70743876 Msa0660160:intron 50.0%
GTTGCACTATAGCAATGGCC+TGG + chr4_3:70743902-70743921 Msa0660160:intron 50.0%
TACAGGCAGCAACACAAGCA+GGG + chr4_3:70744059-70744078 Msa0660160:intron 50.0%
ACAAGCAGGGATGTCTTGTG+TGG + chr4_3:70744072-70744091 Msa0660160:CDS 50.0%
GTGAGTGAGAGTAGAAGCCA+TGG - chr4_3:70740157-70740176 None:intergenic 50.0%
GAGATAGGAATGGGAAGTGG+AGG - chr4_3:70740196-70740215 None:intergenic 50.0%
GGAGAGATAGGAATGGGAAG+TGG - chr4_3:70740199-70740218 None:intergenic 50.0%
!! GTGTCTGGTTTGGGAGAGAT+AGG - chr4_3:70740211-70740230 None:intergenic 50.0%
CTTCTCCTCAACCACTCAAC+TGG + chr4_3:70740445-70740464 Msa0660160:CDS 50.0%
TGGGTTTGCCACCACCAATT+TGG - chr4_3:70740500-70740519 None:intergenic 50.0%
GTGGCAAACCCAAAATGCGA+TGG + chr4_3:70740508-70740527 Msa0660160:CDS 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG - chr4_3:70741499-70741518 None:intergenic 50.0%
GCACAGGTAAAACCTAGACC+AGG + chr4_3:70742552-70742571 Msa0660160:intron 50.0%
AGCCTTGATTGCTTCCTTGC+TGG + chr4_3:70742929-70742948 Msa0660160:CDS 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG - chr4_3:70741499-70741518 None:intergenic 50.0%
CCAATAGCAAGCTACCATGG+TGG - chr4_3:70743860-70743879 None:intergenic 50.0%
!! CCACCATGGTAGCTTGCTAT+TGG + chr4_3:70743857-70743876 Msa0660160:intron 50.0%
GTTGCACTATAGCAATGGCC+TGG + chr4_3:70743902-70743921 Msa0660160:intron 50.0%
TACAGGCAGCAACACAAGCA+GGG + chr4_3:70744059-70744078 Msa0660160:intron 50.0%
ACAAGCAGGGATGTCTTGTG+TGG + chr4_3:70744072-70744091 Msa0660160:CDS 50.0%
TGACTGTGACGGCGTCATCT+TGG + chr4_3:70740353-70740372 Msa0660160:CDS 55.0%
! CTTTATTTGTGGGGTGCGCC+AGG - chr4_3:70741677-70741696 None:intergenic 55.0%
GGCCCAATAGCAAGCTACCA+TGG - chr4_3:70743863-70743882 None:intergenic 55.0%
CTACAGGCAGCAACACAAGC+AGG + chr4_3:70744058-70744077 Msa0660160:intron 55.0%
CTCAGCGGTGGAAGATGTGT+AGG - chr4_3:70744101-70744120 None:intergenic 55.0%
TGACTGTGACGGCGTCATCT+TGG + chr4_3:70740353-70740372 Msa0660160:CDS 55.0%
! CTTTATTTGTGGGGTGCGCC+AGG - chr4_3:70741677-70741696 None:intergenic 55.0%
GGCCCAATAGCAAGCTACCA+TGG - chr4_3:70743863-70743882 None:intergenic 55.0%
CTACAGGCAGCAACACAAGC+AGG + chr4_3:70744058-70744077 Msa0660160:intron 55.0%
CTCAGCGGTGGAAGATGTGT+AGG - chr4_3:70744101-70744120 None:intergenic 55.0%
ACGCAAAGGCGACGCAAGAG+AGG - chr4_3:70743884-70743903 None:intergenic 60.0%
CACATCTTCCACCGCTGAGC+AGG + chr4_3:70744102-70744121 Msa0660160:CDS 60.0%
ACGCAAAGGCGACGCAAGAG+AGG - chr4_3:70743884-70743903 None:intergenic 60.0%
CACATCTTCCACCGCTGAGC+AGG + chr4_3:70744102-70744121 Msa0660160:CDS 60.0%
TTGAGGGGGAGAGGCCACCA+TGG + chr4_3:70743843-70743862 Msa0660160:intron 65.0%
! CTTCAATGGTGGGGTGCGCC+AGG - chr4_3:70743923-70743942 None:intergenic 65.0%
CTTCCACCGCTGAGCAGGTG+AGG + chr4_3:70744107-70744126 Msa0660160:intron 65.0%
GAGGGTCCTCACCTGCTCAG+CGG - chr4_3:70744116-70744135 None:intergenic 65.0%
TTGAGGGGGAGAGGCCACCA+TGG + chr4_3:70743843-70743862 Msa0660160:intron 65.0%
! CTTCAATGGTGGGGTGCGCC+AGG - chr4_3:70743923-70743942 None:intergenic 65.0%
CTTCCACCGCTGAGCAGGTG+AGG + chr4_3:70744107-70744126 Msa0660160:intron 65.0%
GAGGGTCCTCACCTGCTCAG+CGG - chr4_3:70744116-70744135 None:intergenic 65.0%
GGTCCTCACCTGCTCAGCGG+TGG - chr4_3:70744113-70744132 None:intergenic 70.0%
GGTCCTCACCTGCTCAGCGG+TGG - chr4_3:70744113-70744132 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 70740048 70744726 70740048 ID=Msa0660160;Name=Msa0660160
chr4_3 mRNA 70740048 70744726 70740048 ID=Msa0660160-mRNA-1;Parent=Msa0660160;Name=Msa0660160-mRNA-1;_AED=0.12;_eAED=0.12;_QI=57|1|1|1|1|1|11|305|331
chr4_3 exon 70740048 70740529 70740048 ID=Msa0660160-mRNA-1:exon:21073;Parent=Msa0660160-mRNA-1
chr4_3 exon 70740645 70740738 70740645 ID=Msa0660160-mRNA-1:exon:21074;Parent=Msa0660160-mRNA-1
chr4_3 exon 70742405 70742449 70742405 ID=Msa0660160-mRNA-1:exon:21075;Parent=Msa0660160-mRNA-1
chr4_3 exon 70742558 70742608 70742558 ID=Msa0660160-mRNA-1:exon:21076;Parent=Msa0660160-mRNA-1
chr4_3 exon 70742752 70742826 70742752 ID=Msa0660160-mRNA-1:exon:21077;Parent=Msa0660160-mRNA-1
chr4_3 exon 70742917 70742950 70742917 ID=Msa0660160-mRNA-1:exon:21078;Parent=Msa0660160-mRNA-1
chr4_3 exon 70743071 70743126 70743071 ID=Msa0660160-mRNA-1:exon:21079;Parent=Msa0660160-mRNA-1
chr4_3 exon 70743229 70743288 70743229 ID=Msa0660160-mRNA-1:exon:21080;Parent=Msa0660160-mRNA-1
chr4_3 exon 70744064 70744123 70744064 ID=Msa0660160-mRNA-1:exon:21081;Parent=Msa0660160-mRNA-1
chr4_3 exon 70744237 70744283 70744237 ID=Msa0660160-mRNA-1:exon:21082;Parent=Msa0660160-mRNA-1
chr4_3 exon 70744373 70744726 70744373 ID=Msa0660160-mRNA-1:exon:21083;Parent=Msa0660160-mRNA-1
chr4_3 five_prime_UTR 70740048 70740104 70740048 ID=Msa0660160-mRNA-1:five_prime_utr;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70740105 70740529 70740105 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70740645 70740738 70740645 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70742405 70742449 70742405 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70742558 70742608 70742558 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70742752 70742826 70742752 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70742917 70742950 70742917 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70743071 70743126 70743071 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70743229 70743288 70743229 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70744064 70744123 70744064 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70744237 70744283 70744237 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 CDS 70744373 70744421 70744373 ID=Msa0660160-mRNA-1:cds;Parent=Msa0660160-mRNA-1
chr4_3 three_prime_UTR 70744422 70744726 70744422 ID=Msa0660160-mRNA-1:three_prime_utr;Parent=Msa0660160-mRNA-1
Gene Sequence

>Msa0660160

ATGAATAAAGTGATGATGAAGATGAATGGTAAATGGTTGATGAACATGACCATGGCTTCTACTCTCACTCACACACTCTCTCTCACTCCCTCCACTTCCCATTCCTATCTCTCCCAAACCAGACACTGTTTTCGTTATCCAACAATTAAGTTACTTTCTTTCAACAACAATAACCGTAATAACCACCGCGTCTTCTTTAAAGTCTCAGCTTCATCTTCATCTTCATCTTCGTTTCAAGCTCTTATATTTGACTGTGACGGCGTCATCTTGGAATCTGAGCACTTACATCGTCAGGCTTATAATGATGCATTTCTTCACTTCAATGTTCGTTCTCCATCTTCTTCTCCTCAACCACTCAACTGGGATATAGAATTCTATGATCAACTTCAGAACCAAATTGGTGGTGGCAAACCCAAAATGCGATGGTACTTTAAGGAACATGGATGGCCTTCATCAACGTTATTCGAAACTCCTCCTACAATTGATGAGGAACGAGCCAAGTTGATTGACACTCTTCAGGATTGGAAGACAGAGAGATACAAAGATATAATCAAGTCTGGCTCTGTAAAACCTAGACCAGGAGTTTTGAAATTGATGGATGAAGCCAGAGATGCTGGGAAAAAGCTAGCTGTTTGCTCTGCTGCAACTAAAAGTTCAGTTATTCTTTGTCTTGAAAACCTTATTGGAATTGAGCGCTTTCAAAGCCTTGATTGCTTCCTTGCTGGTGATGATGTGAAGGAAAAGAAGCCCGACCCGTCAATATATGTGACTGCTTCCCAGAAGTTGGGTGTATCAGAGAAAAATTGCTTGGTGGTAGAGGATAGTGTTATTGGTTTACAGGCAGCAACACAAGCAGGGATGTCTTGTGTGGTTACCTACACATCTTCCACCGCTGAGCAGGATTTCAAAGAAGCCATAGCAATCTACCCTGACTTGAGTAACGTAAGCTTGAAAGATTTGGAGTTGCTACTTCAAGATGTTGTAGCTGCTAAATAG

Protein sequence

>Msa0660160

MNKVMMKMNGKWLMNMTMASTLTHTLSLTPSTSHSYLSQTRHCFRYPTIKLLSFNNNNRNNHRVFFKVSASSSSSSSFQALIFDCDGVILESEHLHRQAYNDAFLHFNVRSPSSSPQPLNWDIEFYDQLQNQIGGGKPKMRWYFKEHGWPSSTLFETPPTIDEERAKLIDTLQDWKTERYKDIIKSGSVKPRPGVLKLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQSLDCFLAGDDVKEKKPDPSIYVTASQKLGVSEKNCLVVEDSVIGLQAATQAGMSCVVTYTSSTAEQDFKEAIAIYPDLSNVSLKDLELLLQDVVAAK*