AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0708450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708450 MtrunA17_Chr8g0381911 90.741 324 7 3 14 320 1 318 0.0 570
Msa0708450 MtrunA17_Chr3g0116461 40.000 230 107 6 85 298 83 297 1.58e-46 159
Msa0708450 MtrunA17_Chr7g0271811 25.079 315 196 11 26 320 3 297 6.82e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708450 AT4G39970.1 67.820 289 73 2 46 319 32 315 3.02e-143 407
Msa0708450 AT3G48420.1 38.202 267 130 7 52 298 42 293 2.52e-49 167
Msa0708450 AT1G56500.2 28.755 233 140 8 84 309 76 289 1.59e-16 80.9
Msa0708450 AT1G56500.1 28.755 233 140 8 84 309 76 289 2.19e-16 80.5

Find 80 sgRNAs with CRISPR-Local

Find 562 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCTTGAAAACCTTAT+TGG 0.118722 4_4:-82008005 Msa0708450:CDS
AGAAAGGAACCATCGCATTT+TGG 0.197071 4_4:+82010280 None:intergenic
CTCTCATGAATTTACTTTCA+TGG 0.234375 4_4:-82006172 Msa0708450:three_prime_UTR
GGATAGTGTTATTGGTTTAC+AGG 0.248290 4_4:-82007539 Msa0708450:intron
GTGGTAGAGGATAGTGTTAT+TGG 0.306177 4_4:-82007547 Msa0708450:CDS
CAAGTTGATTGACACTCTTC+AGG 0.315114 4_4:-82010071 Msa0708450:intron
AAAGAAAGTAACTTAATTGT+TGG 0.318877 4_4:+82010566 None:intergenic
GATCAACTTCAGAACCAAAT+TGG 0.329933 4_4:-82010314 Msa0708450:CDS
CTTCTCCTCAACCACTCAAC+TGG 0.334806 4_4:-82010352 Msa0708450:CDS
TTTATGCAGCTTGAAAGATT+TGG 0.334851 4_4:-82006443 Msa0708450:intron
TGGGTTTGCCACCACCAATT+TGG 0.338447 4_4:+82010300 None:intergenic
AGAAGACGCGGTGGTTATTA+CGG 0.344000 4_4:+82010531 None:intergenic
TATTATTAGTTACCTTGAAT+TGG 0.347791 4_4:-82006356 Msa0708450:three_prime_UTR
GTAGGCTTACAATTCCAATA+AGG 0.351543 4_4:+82007991 None:intergenic
AGCCTTGATTGCTTCCTTGC+TGG 0.357422 4_4:-82007877 Msa0708450:intron
ACGAAAACAGTGTCTGGTTT+GGG 0.389149 4_4:+82010592 None:intergenic
TTCATTGCAAAATGTAATAA+AGG 0.395463 4_4:-82006224 Msa0708450:three_prime_UTR
TACCTTACGTTACTCAAGTC+AGG 0.404434 4_4:+82006542 None:intergenic
AACGAAAACAGTGTCTGGTT+TGG 0.405544 4_4:+82010591 None:intergenic
AATATATGTGACTGCTTCCC+AGG 0.410556 4_4:-82007701 Msa0708450:intron
TACTCACATAAACCAATTCA+AGG 0.419100 4_4:+82006344 None:intergenic
AATTTCAAAACTCCTGGTCT+AGG 0.433116 4_4:+82008241 None:intergenic
GTGTCTGGTTTGGGAGAGAT+AGG 0.433632 4_4:+82010601 None:intergenic
AAATAATCGTACAGCATCTC+TGG 0.438342 4_4:+82008207 None:intergenic
TGATGAAGATGAATGGTAAA+TGG 0.439886 4_4:-82010691 Msa0708450:CDS
ATCTGAGCACTTACATCGTC+AGG 0.441291 4_4:-82010420 Msa0708450:CDS
TCCATCAATTTCAAAACTCC+TGG 0.446507 4_4:+82008235 None:intergenic
TGGATAACGAAAACAGTGTC+TGG 0.452538 4_4:+82010586 None:intergenic
GGAGAGATAGGAATGGGAAG+TGG 0.465100 4_4:+82010613 None:intergenic
CTGAAGAGTGTCAATCAACT+TGG 0.465240 4_4:+82010072 None:intergenic
CACATCTTCCACCGCTGAGC+AGG 0.465541 4_4:-82006704 Msa0708450:intron
ATATCCCAGTTGAGTGGTTG+AGG 0.470059 4_4:+82010347 None:intergenic
AGTGGTTGAGGAGAAGAAGA+TGG 0.476823 4_4:+82010359 None:intergenic
TGACTGTGACGGCGTCATCT+TGG 0.485254 4_4:-82010444 Msa0708450:CDS
GAGATAGGAATGGGAAGTGG+AGG 0.489137 4_4:+82010616 None:intergenic
TACCAGCAAGGAAGCAATCA+AGG 0.493810 4_4:+82007875 None:intergenic
TTGGTTTATGTGAGTAAAGC+CGG 0.504542 4_4:-82006337 Msa0708450:three_prime_UTR
TTTAGGTACTTTAAGGAACA+TGG 0.507062 4_4:-82010148 Msa0708450:intron
TAGAATTATTGTTTATGACA+TGG 0.513032 4_4:-82006388 Msa0708450:three_prime_UTR
GTCACATATATTGACGGGTC+GGG 0.515661 4_4:+82007712 None:intergenic
AGATAGGAATGGGAAGTGGA+GGG 0.517620 4_4:+82010617 None:intergenic
GTTTCGAATAACGTTGATGA+AGG 0.523215 4_4:+82010121 None:intergenic
CTACAGGCAGCAACACAAGC+AGG 0.528121 4_4:-82006748 Msa0708450:intron
GGTTTGGGAGAGATAGGAAT+GGG 0.529561 4_4:+82010607 None:intergenic
GCTCGTTCCTCATCACTAGT+AGG 0.533793 4_4:+82010094 None:intergenic
TAAAGCCGGTCGAAAGTTTG+AGG 0.533834 4_4:-82006323 Msa0708450:three_prime_UTR
GGTCCTCACCTGCTCAGCGG+TGG 0.535481 4_4:+82006696 None:intergenic
GACATTCAAAATACAAACAA+TGG 0.540677 4_4:+82006194 None:intergenic
ATAAACCTCAAACTTTCGAC+CGG 0.546212 4_4:+82006318 None:intergenic
TTCTCCTCAACCACTCAACT+GGG 0.557699 4_4:-82010351 Msa0708450:CDS
CAAGTCAGGGTAGATTGCTA+TGG 0.559972 4_4:+82006556 None:intergenic
TATTGTGCATTGCAGAAGTT+GGG 0.566001 4_4:-82007592 Msa0708450:intron
ACTTTAAGGTGATGATGTGA+AGG 0.567495 4_4:-82007743 Msa0708450:intron
AAGCAGTCACATATATTGAC+GGG 0.575556 4_4:+82007707 None:intergenic
GAAGCAGTCACATATATTGA+CGG 0.578807 4_4:+82007706 None:intergenic
ACCTTACGTTACTCAAGTCA+GGG 0.584360 4_4:+82006543 None:intergenic
AAAGTGATGATGAAGATGAA+TGG 0.585437 4_4:-82010698 Msa0708450:CDS
CTTCAGAACCAAATTGGTGG+TGG 0.586682 4_4:-82010308 Msa0708450:CDS
GCTCTTATATTTGACTGTGA+CGG 0.589256 4_4:-82010455 Msa0708450:CDS
TGGTTTGGGAGAGATAGGAA+TGG 0.592029 4_4:+82010606 None:intergenic
ACCCTGACTTGAGTAACGTA+AGG 0.601515 4_4:-82006544 Msa0708450:intron
CGTTCCTCATCACTAGTAGG+AGG 0.603956 4_4:+82010097 None:intergenic
TTAGGTACTTTAAGGAACAT+GGG 0.606397 4_4:-82010147 Msa0708450:intron
CTCAGCGGTGGAAGATGTGT+AGG 0.610677 4_4:+82006708 None:intergenic
CAACTTCAGAACCAAATTGG+TGG 0.613914 4_4:-82010311 Msa0708450:CDS
AATTCTATATCCCAGTTGAG+TGG 0.615799 4_4:+82010341 None:intergenic
AACTCCTCCTACTAGTGATG+AGG 0.626635 4_4:-82010101 Msa0708450:CDS
AAAGTTTGAGGTTTATCACA+AGG 0.626874 4_4:-82006311 Msa0708450:three_prime_UTR
GTGGCAAACCCAAAATGCGA+TGG 0.629207 4_4:-82010289 Msa0708450:intron
AGTCACATATATTGACGGGT+CGG 0.635716 4_4:+82007711 None:intergenic
TACAGGCAGCAACACAAGCA+GGG 0.645859 4_4:-82006747 Msa0708450:intron
CTGAGACTTTAAAGAAGACG+CGG 0.660397 4_4:+82010519 None:intergenic
GTGATGTGCATATACCAGCA+AGG 0.664382 4_4:+82007863 None:intergenic
GGTACTTTAAGGAACATGGG+TGG 0.677672 4_4:-82010144 Msa0708450:CDS
ACAAGCAGGGATGTCTTGTG+TGG 0.683817 4_4:-82006734 Msa0708450:CDS
GCACAGGTAAAACCTAGACC+AGG 0.687401 4_4:-82008253 Msa0708450:intron
GAGGGTCCTCACCTGCTCAG+CGG 0.688575 4_4:+82006693 None:intergenic
GTGAGTGAGAGTAGAAGCCA+TGG 0.700081 4_4:+82010655 None:intergenic
AGACTTTAAAGAAGACGCGG+TGG 0.704059 4_4:+82010522 None:intergenic
ATGGTTGATGAACATGACCA+TGG 0.713190 4_4:-82010672 Msa0708450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATATTAAATTTATTTTTTG+AGG - chr4_4:82007638-82007657 Msa0708450:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG - chr4_4:82007640-82007659 Msa0708450:intron 10.0%
!! TTAAATAAAATTGATAGATA+AGG + chr4_4:82009098-82009117 None:intergenic 10.0%
!!! TCAATTTTATTTAAACTTTA+AGG - chr4_4:82009104-82009123 Msa0708450:intron 10.0%
!! GATATTAAATTTATTTATTG+AGG - chr4_4:82009881-82009900 Msa0708450:intron 10.0%
!! TATTAAATTTATTTATTGAG+GGG - chr4_4:82009883-82009902 Msa0708450:intron 10.0%
!!! GATATTAAATTTATTTTTTG+AGG - chr4_4:82007638-82007657 Msa0708450:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG - chr4_4:82007640-82007659 Msa0708450:intron 10.0%
!! TTAAATAAAATTGATAGATA+AGG + chr4_4:82009098-82009117 None:intergenic 10.0%
!!! TCAATTTTATTTAAACTTTA+AGG - chr4_4:82009104-82009123 Msa0708450:intron 10.0%
!! GATATTAAATTTATTTATTG+AGG - chr4_4:82009881-82009900 Msa0708450:intron 10.0%
!! TATTAAATTTATTTATTGAG+GGG - chr4_4:82009883-82009902 Msa0708450:intron 10.0%
!!! TTATTGTATTGAGAATTTTT+AGG - chr4_4:82006696-82006715 Msa0708450:intron 15.0%
!! TTGTATTTATTATTATGACT+TGG - chr4_4:82006848-82006867 Msa0708450:intron 15.0%
!! AAAATAAATTTAATATCGTG+TGG + chr4_4:82007635-82007654 None:intergenic 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG - chr4_4:82007641-82007660 Msa0708450:intron 15.0%
!!! AAAATTTAGACTTTATTTGT+GGG + chr4_4:82007745-82007764 None:intergenic 15.0%
!!! AAAAATTTAGACTTTATTTG+TGG + chr4_4:82007746-82007765 None:intergenic 15.0%
!! TAAATGAAAAATTTAGAAGT+TGG - chr4_4:82007834-82007853 Msa0708450:intron 15.0%
!! AAATGAAAAATTTAGAAGTT+GGG - chr4_4:82007835-82007854 Msa0708450:intron 15.0%
!!! ATATTACAAAAGTATATATC+CGG + chr4_4:82008681-82008700 None:intergenic 15.0%
!!! ATAAATTATACTTGGTAATT+TGG + chr4_4:82009248-82009267 None:intergenic 15.0%
!! CACAATATATAAATTATACT+TGG + chr4_4:82009256-82009275 None:intergenic 15.0%
!! TAAATAAATTTAATATCGTG+TGG + chr4_4:82009878-82009897 None:intergenic 15.0%
!! ATTAAATTTATTTATTGAGG+GGG - chr4_4:82009884-82009903 Msa0708450:intron 15.0%
!! ATAAAAGAAAAGAAAAACAA+AGG + chr4_4:82010583-82010602 None:intergenic 15.0%
!!! TTATTGTATTGAGAATTTTT+AGG - chr4_4:82006696-82006715 Msa0708450:intron 15.0%
!! TTGTATTTATTATTATGACT+TGG - chr4_4:82006848-82006867 Msa0708450:intron 15.0%
!! AAAATAAATTTAATATCGTG+TGG + chr4_4:82007635-82007654 None:intergenic 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG - chr4_4:82007641-82007660 Msa0708450:intron 15.0%
!!! AAAATTTAGACTTTATTTGT+GGG + chr4_4:82007745-82007764 None:intergenic 15.0%
!!! AAAAATTTAGACTTTATTTG+TGG + chr4_4:82007746-82007765 None:intergenic 15.0%
!! TAAATGAAAAATTTAGAAGT+TGG - chr4_4:82007834-82007853 Msa0708450:intron 15.0%
!! AAATGAAAAATTTAGAAGTT+GGG - chr4_4:82007835-82007854 Msa0708450:intron 15.0%
!!! ATATTACAAAAGTATATATC+CGG + chr4_4:82008681-82008700 None:intergenic 15.0%
!!! ATAAATTATACTTGGTAATT+TGG + chr4_4:82009248-82009267 None:intergenic 15.0%
!! CACAATATATAAATTATACT+TGG + chr4_4:82009256-82009275 None:intergenic 15.0%
!! TAAATAAATTTAATATCGTG+TGG + chr4_4:82009878-82009897 None:intergenic 15.0%
!! ATTAAATTTATTTATTGAGG+GGG - chr4_4:82009884-82009903 Msa0708450:intron 15.0%
!! ATAAAAGAAAAGAAAAACAA+AGG + chr4_4:82010583-82010602 None:intergenic 15.0%
!! AAAGAAAGTAACTTAATTGT+TGG + chr4_4:82006298-82006317 None:intergenic 20.0%
!! AAAGAAAGAAAGAAAAAGAA+AGG + chr4_4:82006600-82006619 None:intergenic 20.0%
!! TTTACTCAATCAAAATAAGT+TGG + chr4_4:82007274-82007293 None:intergenic 20.0%
!!! AAATTTAGACTTTATTTGTG+GGG + chr4_4:82007744-82007763 None:intergenic 20.0%
!!! GTTTGCTTTAAGTATTTATT+TGG - chr4_4:82007766-82007785 Msa0708450:intron 20.0%
!! AAGAAACATGTTAAAATGAT+GGG + chr4_4:82008054-82008073 None:intergenic 20.0%
!! TAAGAAACATGTTAAAATGA+TGG + chr4_4:82008055-82008074 None:intergenic 20.0%
!! CATTTAATCATGTTAAGATA+TGG - chr4_4:82008223-82008242 Msa0708450:CDS 20.0%
!!! TTTGAAAAGTGAAATTTTGA+GGG - chr4_4:82009210-82009229 Msa0708450:intron 20.0%
!! AACATGATTAAATGCAATTT+AGG + chr4_4:82008217-82008236 None:intergenic 20.0%
!! CAAAACTAATAAATTTCTAC+AGG - chr4_4:82010097-82010116 Msa0708450:CDS 20.0%
!! TACGATTTGATATTGAAATT+CGG - chr4_4:82010214-82010233 Msa0708450:intron 20.0%
!! TAGAATTATTGTTTATGACA+TGG - chr4_4:82010473-82010492 Msa0708450:CDS 20.0%
!! TATTATTAGTTACCTTGAAT+TGG - chr4_4:82010505-82010524 Msa0708450:CDS 20.0%
!!! TTCTTTTACATGTTTTTATG+TGG - chr4_4:82010608-82010627 Msa0708450:CDS 20.0%
!! TTCATTGCAAAATGTAATAA+AGG - chr4_4:82010637-82010656 Msa0708450:CDS 20.0%
!! AAAGAAAGTAACTTAATTGT+TGG + chr4_4:82006298-82006317 None:intergenic 20.0%
!! AAAGAAAGAAAGAAAAAGAA+AGG + chr4_4:82006600-82006619 None:intergenic 20.0%
!! TTTACTCAATCAAAATAAGT+TGG + chr4_4:82007274-82007293 None:intergenic 20.0%
!!! AAATTTAGACTTTATTTGTG+GGG + chr4_4:82007744-82007763 None:intergenic 20.0%
!!! GTTTGCTTTAAGTATTTATT+TGG - chr4_4:82007766-82007785 Msa0708450:intron 20.0%
!! AAGAAACATGTTAAAATGAT+GGG + chr4_4:82008054-82008073 None:intergenic 20.0%
!! TAAGAAACATGTTAAAATGA+TGG + chr4_4:82008055-82008074 None:intergenic 20.0%
!! CATTTAATCATGTTAAGATA+TGG - chr4_4:82008223-82008242 Msa0708450:CDS 20.0%
!!! TTTGAAAAGTGAAATTTTGA+GGG - chr4_4:82009210-82009229 Msa0708450:intron 20.0%
!! AACATGATTAAATGCAATTT+AGG + chr4_4:82008217-82008236 None:intergenic 20.0%
!! CAAAACTAATAAATTTCTAC+AGG - chr4_4:82010097-82010116 Msa0708450:CDS 20.0%
!! TACGATTTGATATTGAAATT+CGG - chr4_4:82010214-82010233 Msa0708450:intron 20.0%
!! TAGAATTATTGTTTATGACA+TGG - chr4_4:82010473-82010492 Msa0708450:CDS 20.0%
!! TATTATTAGTTACCTTGAAT+TGG - chr4_4:82010505-82010524 Msa0708450:CDS 20.0%
!!! TTCTTTTACATGTTTTTATG+TGG - chr4_4:82010608-82010627 Msa0708450:CDS 20.0%
!! TTCATTGCAAAATGTAATAA+AGG - chr4_4:82010637-82010656 Msa0708450:CDS 20.0%
!!! GAGAATTTTTAGGTACTTTA+AGG - chr4_4:82006706-82006725 Msa0708450:CDS 25.0%
! TGTGTAGTAATTTAGTACTT+AGG - chr4_4:82006994-82007013 Msa0708450:intron 25.0%
! CTGGTTACTATTTATTTAGA+GGG - chr4_4:82007094-82007113 Msa0708450:intron 25.0%
! TGGTTACTATTTATTTAGAG+GGG - chr4_4:82007095-82007114 Msa0708450:intron 25.0%
! ACGATTATAGTTTCATTGTT+TGG - chr4_4:82007184-82007203 Msa0708450:intron 25.0%
!! CAATCAAAATAAGTTGGAAA+AGG + chr4_4:82007268-82007287 None:intergenic 25.0%
!! AATTTGAGACTTAAGTCAAA+TGG - chr4_4:82007393-82007412 Msa0708450:intron 25.0%
! TTATTTCATCTAACCAATGT+GGG + chr4_4:82007478-82007497 None:intergenic 25.0%
! ATTTACAGAACTTATGATAC+TGG + chr4_4:82007819-82007838 None:intergenic 25.0%
! CATGATTCACTTATATTTCT+TGG + chr4_4:82008104-82008123 None:intergenic 25.0%
!! ATTAAATTACCTTCGCATTT+TGG - chr4_4:82008586-82008605 Msa0708450:intron 25.0%
! TTAATACTTGTTCTCTCTAT+TGG - chr4_4:82008894-82008913 Msa0708450:intron 25.0%
! TTGATAGATAAGGTTAAACT+TGG + chr4_4:82009088-82009107 None:intergenic 25.0%
! GTATTGTCATATTAAAACCT+GGG + chr4_4:82009180-82009199 None:intergenic 25.0%
!!! CTTTGAAAAGTGAAATTTTG+AGG - chr4_4:82009209-82009228 Msa0708450:intron 25.0%
! CTCTTTATATGTTGTGAAAA+AGG - chr4_4:82009391-82009410 Msa0708450:intron 25.0%
!!! TTGTTGTTTGATATAGTAGT+TGG - chr4_4:82008140-82008159 Msa0708450:intron 25.0%
! TCTATTCACAAATCTCTATT+TGG - chr4_4:82009520-82009539 Msa0708450:intron 25.0%
! AAATGCAATTTAGGTAGATA+AGG + chr4_4:82009548-82009567 None:intergenic 25.0%
! TTAGAAAATCATACCTTTCT+CGG - chr4_4:82009784-82009803 Msa0708450:intron 25.0%
! TCAGTTTAATATCTGATATG+TGG - chr4_4:82009843-82009862 Msa0708450:intron 25.0%
! CAGTTTAATATCTGATATGT+GGG - chr4_4:82009844-82009863 Msa0708450:intron 25.0%
! AACAAAACTTAAGACTTCAA+TGG + chr4_4:82009992-82010011 None:intergenic 25.0%
!!! ACAAAAGATGATTAGTTTAG+TGG + chr4_4:82010050-82010069 None:intergenic 25.0%
!! TTCTGGTTAAATTCATTTGA+GGG + chr4_4:82010189-82010208 None:intergenic 25.0%
!!! TTTCTGGTTAAATTCATTTG+AGG + chr4_4:82010190-82010209 None:intergenic 25.0%
!! TATCAAATCGTAGTATTTTC+TGG + chr4_4:82010206-82010225 None:intergenic 25.0%
! ACGATTTGATATTGAAATTC+GGG - chr4_4:82010215-82010234 Msa0708450:intron 25.0%
! GACATTCAAAATACAAACAA+TGG + chr4_4:82010670-82010689 None:intergenic 25.0%
!!! GAGAATTTTTAGGTACTTTA+AGG - chr4_4:82006706-82006725 Msa0708450:CDS 25.0%
! TGTGTAGTAATTTAGTACTT+AGG - chr4_4:82006994-82007013 Msa0708450:intron 25.0%
! CTGGTTACTATTTATTTAGA+GGG - chr4_4:82007094-82007113 Msa0708450:intron 25.0%
! TGGTTACTATTTATTTAGAG+GGG - chr4_4:82007095-82007114 Msa0708450:intron 25.0%
! ACGATTATAGTTTCATTGTT+TGG - chr4_4:82007184-82007203 Msa0708450:intron 25.0%
!! CAATCAAAATAAGTTGGAAA+AGG + chr4_4:82007268-82007287 None:intergenic 25.0%
!! AATTTGAGACTTAAGTCAAA+TGG - chr4_4:82007393-82007412 Msa0708450:intron 25.0%
! TTATTTCATCTAACCAATGT+GGG + chr4_4:82007478-82007497 None:intergenic 25.0%
! ATTTACAGAACTTATGATAC+TGG + chr4_4:82007819-82007838 None:intergenic 25.0%
! CATGATTCACTTATATTTCT+TGG + chr4_4:82008104-82008123 None:intergenic 25.0%
!! ATTAAATTACCTTCGCATTT+TGG - chr4_4:82008586-82008605 Msa0708450:intron 25.0%
! TTAATACTTGTTCTCTCTAT+TGG - chr4_4:82008894-82008913 Msa0708450:intron 25.0%
! TTGATAGATAAGGTTAAACT+TGG + chr4_4:82009088-82009107 None:intergenic 25.0%
! GTATTGTCATATTAAAACCT+GGG + chr4_4:82009180-82009199 None:intergenic 25.0%
!!! CTTTGAAAAGTGAAATTTTG+AGG - chr4_4:82009209-82009228 Msa0708450:intron 25.0%
! CTCTTTATATGTTGTGAAAA+AGG - chr4_4:82009391-82009410 Msa0708450:intron 25.0%
!!! TTGTTGTTTGATATAGTAGT+TGG - chr4_4:82008140-82008159 Msa0708450:intron 25.0%
! TCTATTCACAAATCTCTATT+TGG - chr4_4:82009520-82009539 Msa0708450:intron 25.0%
! AAATGCAATTTAGGTAGATA+AGG + chr4_4:82009548-82009567 None:intergenic 25.0%
! TTAGAAAATCATACCTTTCT+CGG - chr4_4:82009784-82009803 Msa0708450:intron 25.0%
! TCAGTTTAATATCTGATATG+TGG - chr4_4:82009843-82009862 Msa0708450:intron 25.0%
! CAGTTTAATATCTGATATGT+GGG - chr4_4:82009844-82009863 Msa0708450:intron 25.0%
! AACAAAACTTAAGACTTCAA+TGG + chr4_4:82009992-82010011 None:intergenic 25.0%
!!! ACAAAAGATGATTAGTTTAG+TGG + chr4_4:82010050-82010069 None:intergenic 25.0%
!! TTCTGGTTAAATTCATTTGA+GGG + chr4_4:82010189-82010208 None:intergenic 25.0%
!!! TTTCTGGTTAAATTCATTTG+AGG + chr4_4:82010190-82010209 None:intergenic 25.0%
!! TATCAAATCGTAGTATTTTC+TGG + chr4_4:82010206-82010225 None:intergenic 25.0%
! ACGATTTGATATTGAAATTC+GGG - chr4_4:82010215-82010234 Msa0708450:intron 25.0%
! GACATTCAAAATACAAACAA+TGG + chr4_4:82010670-82010689 None:intergenic 25.0%
! AAAGTGATGATGAAGATGAA+TGG - chr4_4:82006163-82006182 Msa0708450:three_prime_UTR 30.0%
TGATGAAGATGAATGGTAAA+TGG - chr4_4:82006170-82006189 Msa0708450:three_prime_UTR 30.0%
! TTTAGGTACTTTAAGGAACA+TGG - chr4_4:82006713-82006732 Msa0708450:CDS 30.0%
! TTAGGTACTTTAAGGAACAT+GGG - chr4_4:82006714-82006733 Msa0708450:CDS 30.0%
TTCTGTTCTGATAGTACATT+CGG + chr4_4:82006972-82006991 None:intergenic 30.0%
GTAGTAATTTAGTACTTAGG+AGG - chr4_4:82006997-82007016 Msa0708450:intron 30.0%
CCTCTAAATAAATAGTAACC+AGG + chr4_4:82007096-82007115 None:intergenic 30.0%
CCTGGTTACTATTTATTTAG+AGG - chr4_4:82007093-82007112 Msa0708450:intron 30.0%
TTTATTTAGAGGGGAAAACT+TGG - chr4_4:82007104-82007123 Msa0708450:intron 30.0%
TTCCTACTGTATAGTTGAAA+GGG + chr4_4:82007147-82007166 None:intergenic 30.0%
ATTCCTACTGTATAGTTGAA+AGG + chr4_4:82007148-82007167 None:intergenic 30.0%
CTCAAATTCATTCTTCAATG+TGG + chr4_4:82007381-82007400 None:intergenic 30.0%
! GTTATTTCATCTAACCAATG+TGG + chr4_4:82007479-82007498 None:intergenic 30.0%
! AGATGAAATAACAAGTACTG+AGG - chr4_4:82007487-82007506 Msa0708450:intron 30.0%
TTTGCAAATCATACCTTTCT+CGG - chr4_4:82007541-82007560 Msa0708450:CDS 30.0%
TGTATTGTAGTGTTAAAAGC+TGG - chr4_4:82007900-82007919 Msa0708450:intron 30.0%
GACATGTTCATGAAAATAGA+TGG + chr4_4:82007998-82008017 None:intergenic 30.0%
!!! AGTCAAAGTTATTTTGAGTG+AGG - chr4_4:82008294-82008313 Msa0708450:intron 30.0%
ACAAGTGTTTGAACTTTCAT+AGG + chr4_4:82008336-82008355 None:intergenic 30.0%
!! CTTGCATAACTAGCTTATTT+TGG - chr4_4:82008368-82008387 Msa0708450:intron 30.0%
AGAGTATGGTGTAATTTCAT+TGG - chr4_4:82008432-82008451 Msa0708450:intron 30.0%
TGTAATTTCATTGGTCATGT+AGG - chr4_4:82008441-82008460 Msa0708450:intron 30.0%
GATACAAAGATAATCAAGTC+TGG - chr4_4:82008479-82008498 Msa0708450:intron 30.0%
ATTCAGGAATGTGGAATATT+AGG + chr4_4:82008526-82008545 None:intergenic 30.0%
ATCAAGTATAACGGTAAACA+AGG + chr4_4:82008742-82008761 None:intergenic 30.0%
TGTTTACCGTTATACTTGAT+TGG - chr4_4:82008742-82008761 Msa0708450:intron 30.0%
ACCAAACCAATCAAGTATAA+CGG + chr4_4:82008751-82008770 None:intergenic 30.0%
!! TATACTTGATTGGTTTGGTT+CGG - chr4_4:82008752-82008771 Msa0708450:intron 30.0%
CTTTGTCTTGAAAACCTTAT+TGG - chr4_4:82008856-82008875 Msa0708450:intron 30.0%
GAGAGAACAAGTATTAAAGT+AGG + chr4_4:82008891-82008910 None:intergenic 30.0%
!!! CATCTTATTTTTTCTACTGC+AGG - chr4_4:82008950-82008969 Msa0708450:intron 30.0%
GGTATTGTCATATTAAAACC+TGG + chr4_4:82009181-82009200 None:intergenic 30.0%
!! TCACTTTTCAAAGTTCTTGA+TGG + chr4_4:82009202-82009221 None:intergenic 30.0%
TGTATCAGAGAAAAATTGCT+TGG - chr4_4:82009292-82009311 Msa0708450:intron 30.0%
TTGTTTCATCTAACCAATGT+GGG + chr4_4:82009723-82009742 None:intergenic 30.0%
AGATGAAACAACAAATACTG+AGG - chr4_4:82009732-82009751 Msa0708450:intron 30.0%
!! GAAAGGTATGATTTTCTAAG+AGG + chr4_4:82009783-82009802 None:intergenic 30.0%
AAACTTAAGACTTCAATGGT+GGG + chr4_4:82009988-82010007 None:intergenic 30.0%
AAAACTTAAGACTTCAATGG+TGG + chr4_4:82009989-82010008 None:intergenic 30.0%
ATTTGATATTGAAATTCGGG+TGG - chr4_4:82010218-82010237 Msa0708450:intron 30.0%
! TTTTGTCTTTGATCGAATGT+AGG - chr4_4:82010270-82010289 Msa0708450:intron 30.0%
!! TGCTGAAAACTGTTTCTATT+AGG - chr4_4:82010356-82010375 Msa0708450:CDS 30.0%
TTTATGCAGCTTGAAAGATT+TGG - chr4_4:82010418-82010437 Msa0708450:CDS 30.0%
TACTCACATAAACCAATTCA+AGG + chr4_4:82010520-82010539 None:intergenic 30.0%
! AAAGTTTGAGGTTTATCACA+AGG - chr4_4:82010550-82010569 Msa0708450:CDS 30.0%
CTCTCATGAATTTACTTTCA+TGG - chr4_4:82010689-82010708 Msa0708450:CDS 30.0%
! AAAGTGATGATGAAGATGAA+TGG - chr4_4:82006163-82006182 Msa0708450:three_prime_UTR 30.0%
TGATGAAGATGAATGGTAAA+TGG - chr4_4:82006170-82006189 Msa0708450:three_prime_UTR 30.0%
! TTTAGGTACTTTAAGGAACA+TGG - chr4_4:82006713-82006732 Msa0708450:CDS 30.0%
! TTAGGTACTTTAAGGAACAT+GGG - chr4_4:82006714-82006733 Msa0708450:CDS 30.0%
TTCTGTTCTGATAGTACATT+CGG + chr4_4:82006972-82006991 None:intergenic 30.0%
GTAGTAATTTAGTACTTAGG+AGG - chr4_4:82006997-82007016 Msa0708450:intron 30.0%
CCTCTAAATAAATAGTAACC+AGG + chr4_4:82007096-82007115 None:intergenic 30.0%
CCTGGTTACTATTTATTTAG+AGG - chr4_4:82007093-82007112 Msa0708450:intron 30.0%
TTTATTTAGAGGGGAAAACT+TGG - chr4_4:82007104-82007123 Msa0708450:intron 30.0%
TTCCTACTGTATAGTTGAAA+GGG + chr4_4:82007147-82007166 None:intergenic 30.0%
ATTCCTACTGTATAGTTGAA+AGG + chr4_4:82007148-82007167 None:intergenic 30.0%
CTCAAATTCATTCTTCAATG+TGG + chr4_4:82007381-82007400 None:intergenic 30.0%
! GTTATTTCATCTAACCAATG+TGG + chr4_4:82007479-82007498 None:intergenic 30.0%
! AGATGAAATAACAAGTACTG+AGG - chr4_4:82007487-82007506 Msa0708450:intron 30.0%
TTTGCAAATCATACCTTTCT+CGG - chr4_4:82007541-82007560 Msa0708450:CDS 30.0%
TGTATTGTAGTGTTAAAAGC+TGG - chr4_4:82007900-82007919 Msa0708450:intron 30.0%
GACATGTTCATGAAAATAGA+TGG + chr4_4:82007998-82008017 None:intergenic 30.0%
!!! AGTCAAAGTTATTTTGAGTG+AGG - chr4_4:82008294-82008313 Msa0708450:intron 30.0%
ACAAGTGTTTGAACTTTCAT+AGG + chr4_4:82008336-82008355 None:intergenic 30.0%
!! CTTGCATAACTAGCTTATTT+TGG - chr4_4:82008368-82008387 Msa0708450:intron 30.0%
AGAGTATGGTGTAATTTCAT+TGG - chr4_4:82008432-82008451 Msa0708450:intron 30.0%
TGTAATTTCATTGGTCATGT+AGG - chr4_4:82008441-82008460 Msa0708450:intron 30.0%
GATACAAAGATAATCAAGTC+TGG - chr4_4:82008479-82008498 Msa0708450:intron 30.0%
ATTCAGGAATGTGGAATATT+AGG + chr4_4:82008526-82008545 None:intergenic 30.0%
ATCAAGTATAACGGTAAACA+AGG + chr4_4:82008742-82008761 None:intergenic 30.0%
TGTTTACCGTTATACTTGAT+TGG - chr4_4:82008742-82008761 Msa0708450:intron 30.0%
ACCAAACCAATCAAGTATAA+CGG + chr4_4:82008751-82008770 None:intergenic 30.0%
!! TATACTTGATTGGTTTGGTT+CGG - chr4_4:82008752-82008771 Msa0708450:intron 30.0%
CTTTGTCTTGAAAACCTTAT+TGG - chr4_4:82008856-82008875 Msa0708450:intron 30.0%
GAGAGAACAAGTATTAAAGT+AGG + chr4_4:82008891-82008910 None:intergenic 30.0%
!!! CATCTTATTTTTTCTACTGC+AGG - chr4_4:82008950-82008969 Msa0708450:intron 30.0%
GGTATTGTCATATTAAAACC+TGG + chr4_4:82009181-82009200 None:intergenic 30.0%
!! TCACTTTTCAAAGTTCTTGA+TGG + chr4_4:82009202-82009221 None:intergenic 30.0%
TGTATCAGAGAAAAATTGCT+TGG - chr4_4:82009292-82009311 Msa0708450:intron 30.0%
TTGTTTCATCTAACCAATGT+GGG + chr4_4:82009723-82009742 None:intergenic 30.0%
AGATGAAACAACAAATACTG+AGG - chr4_4:82009732-82009751 Msa0708450:intron 30.0%
!! GAAAGGTATGATTTTCTAAG+AGG + chr4_4:82009783-82009802 None:intergenic 30.0%
AAACTTAAGACTTCAATGGT+GGG + chr4_4:82009988-82010007 None:intergenic 30.0%
AAAACTTAAGACTTCAATGG+TGG + chr4_4:82009989-82010008 None:intergenic 30.0%
ATTTGATATTGAAATTCGGG+TGG - chr4_4:82010218-82010237 Msa0708450:intron 30.0%
! TTTTGTCTTTGATCGAATGT+AGG - chr4_4:82010270-82010289 Msa0708450:intron 30.0%
!! TGCTGAAAACTGTTTCTATT+AGG - chr4_4:82010356-82010375 Msa0708450:CDS 30.0%
TTTATGCAGCTTGAAAGATT+TGG - chr4_4:82010418-82010437 Msa0708450:CDS 30.0%
TACTCACATAAACCAATTCA+AGG + chr4_4:82010520-82010539 None:intergenic 30.0%
! AAAGTTTGAGGTTTATCACA+AGG - chr4_4:82010550-82010569 Msa0708450:CDS 30.0%
CTCTCATGAATTTACTTTCA+TGG - chr4_4:82010689-82010708 Msa0708450:CDS 30.0%
! ATCACTCTCTATGTTTTGTG+TGG + chr4_4:82006139-82006158 None:intergenic 35.0%
GCTCTTATATTTGACTGTGA+CGG - chr4_4:82006406-82006425 Msa0708450:exon 35.0%
AATTCTATATCCCAGTTGAG+TGG + chr4_4:82006523-82006542 None:intergenic 35.0%
GATCAACTTCAGAACCAAAT+TGG - chr4_4:82006547-82006566 Msa0708450:CDS 35.0%
! GTTTCGAATAACGTTGATGA+AGG + chr4_4:82006743-82006762 None:intergenic 35.0%
GTCTTATGTCAAACACACAT+CGG + chr4_4:82006914-82006933 None:intergenic 35.0%
ATGGGAAACATGGTAATTAG+TGG + chr4_4:82007024-82007043 None:intergenic 35.0%
AGTCTCATCCTATGAACAAT+GGG + chr4_4:82007042-82007061 None:intergenic 35.0%
AAGTCTCATCCTATGAACAA+TGG + chr4_4:82007043-82007062 None:intergenic 35.0%
TCATAGGATGAGACTTAGAT+TGG - chr4_4:82007047-82007066 Msa0708450:intron 35.0%
TCCTACTGTATAGTTGAAAG+GGG + chr4_4:82007146-82007165 None:intergenic 35.0%
ATGAGTTATATGTCCCACAT+TGG - chr4_4:82007462-82007481 Msa0708450:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_4:82007567-82007586 None:intergenic 35.0%
ATATCTGATATGTGAGCCAA+TGG - chr4_4:82007608-82007627 Msa0708450:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_4:82007627-82007646 None:intergenic 35.0%
GAAGTTGGGATGAGATTATT+TGG - chr4_4:82007849-82007868 Msa0708450:intron 35.0%
!!! AGCATGGAAGTTTTGAACTT+GGG - chr4_4:82007872-82007891 Msa0708450:intron 35.0%
CTCTTGAATAACTGTAAACC+TGG - chr4_4:82007936-82007955 Msa0708450:intron 35.0%
TAGGTTTACAATTGCTAACC+AGG + chr4_4:82007957-82007976 None:intergenic 35.0%
GTTCATTTGAGTGTGAAAGT+AGG + chr4_4:82007976-82007995 None:intergenic 35.0%
! GGGATTCAAATTGTTAGTCT+TGG + chr4_4:82008034-82008053 None:intergenic 35.0%
! GTTGATTCCATATGACATGA+AGG - chr4_4:82008251-82008270 Msa0708450:intron 35.0%
GTTGTATCCTTCATGTCATA+TGG + chr4_4:82008261-82008280 None:intergenic 35.0%
ATTACACCATACTCTAAGTG+AGG + chr4_4:82008427-82008446 None:intergenic 35.0%
TTTCATTGGTCATGTAGGAT+TGG - chr4_4:82008446-82008465 Msa0708450:intron 35.0%
AAATACCACCTTCACAATTC+AGG + chr4_4:82008542-82008561 None:intergenic 35.0%
AATTTCAAAACTCCTGGTCT+AGG + chr4_4:82008623-82008642 None:intergenic 35.0%
!!! ACCAGGAGTTTTGAAATTGA+TGG - chr4_4:82008625-82008644 Msa0708450:intron 35.0%
TCCATCAATTTCAAAACTCC+TGG + chr4_4:82008629-82008648 None:intergenic 35.0%
AAATAATCGTACAGCATCTC+TGG + chr4_4:82008657-82008676 None:intergenic 35.0%
GATGCTGTACGATTATTTAC+CGG - chr4_4:82008659-82008678 Msa0708450:intron 35.0%
! ACCGTTATACTTGATTGGTT+TGG - chr4_4:82008747-82008766 Msa0708450:intron 35.0%
! TTTTGCTCAATTACTGATGC+AGG - chr4_4:82008786-82008805 Msa0708450:intron 35.0%
TTTGCTCAATTACTGATGCA+GGG - chr4_4:82008787-82008806 Msa0708450:intron 35.0%
GTAGGCTTACAATTCCAATA+AGG + chr4_4:82008873-82008892 None:intergenic 35.0%
!! ACTTTAAGGTGATGATGTGA+AGG - chr4_4:82009118-82009137 Msa0708450:intron 35.0%
AAGCAGTCACATATATTGAC+GGG + chr4_4:82009157-82009176 None:intergenic 35.0%
GAAGCAGTCACATATATTGA+CGG + chr4_4:82009158-82009177 None:intergenic 35.0%
ATATTGTGCATTGCAGAAGT+TGG - chr4_4:82009268-82009287 Msa0708450:intron 35.0%
TATTGTGCATTGCAGAAGTT+GGG - chr4_4:82009269-82009288 Msa0708450:intron 35.0%
ATCAGAGAAAAATTGCTTGG+TGG - chr4_4:82009295-82009314 Msa0708450:intron 35.0%
!! GGATAGTGTTATTGGTTTAC+AGG - chr4_4:82009322-82009341 Msa0708450:intron 35.0%
AGCTTGTGTTAGAAAGTTAG+AGG - chr4_4:82009439-82009458 Msa0708450:intron 35.0%
GCTTGTGTTAGAAAGTTAGA+GGG - chr4_4:82009440-82009459 Msa0708450:intron 35.0%
! GTTGTTTCATCTAACCAATG+TGG + chr4_4:82009724-82009743 None:intergenic 35.0%
!! GGTATGATTTTCTAAGAGGA+TGG + chr4_4:82009779-82009798 None:intergenic 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_4:82007567-82007586 None:intergenic 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_4:82007627-82007646 None:intergenic 35.0%
ATTTATTTATTGAGGGGGAG+AGG - chr4_4:82009889-82009908 Msa0708450:intron 35.0%
AACTTAAGACTTCAATGGTG+GGG + chr4_4:82009987-82010006 None:intergenic 35.0%
TTGGTTTATGTGAGTAAAGC+CGG - chr4_4:82010524-82010543 Msa0708450:CDS 35.0%
ATAAACCTCAAACTTTCGAC+CGG + chr4_4:82010546-82010565 None:intergenic 35.0%
! ATCACTCTCTATGTTTTGTG+TGG + chr4_4:82006139-82006158 None:intergenic 35.0%
GCTCTTATATTTGACTGTGA+CGG - chr4_4:82006406-82006425 Msa0708450:exon 35.0%
AATTCTATATCCCAGTTGAG+TGG + chr4_4:82006523-82006542 None:intergenic 35.0%
GATCAACTTCAGAACCAAAT+TGG - chr4_4:82006547-82006566 Msa0708450:CDS 35.0%
! GTTTCGAATAACGTTGATGA+AGG + chr4_4:82006743-82006762 None:intergenic 35.0%
GTCTTATGTCAAACACACAT+CGG + chr4_4:82006914-82006933 None:intergenic 35.0%
ATGGGAAACATGGTAATTAG+TGG + chr4_4:82007024-82007043 None:intergenic 35.0%
AGTCTCATCCTATGAACAAT+GGG + chr4_4:82007042-82007061 None:intergenic 35.0%
AAGTCTCATCCTATGAACAA+TGG + chr4_4:82007043-82007062 None:intergenic 35.0%
TCATAGGATGAGACTTAGAT+TGG - chr4_4:82007047-82007066 Msa0708450:intron 35.0%
TCCTACTGTATAGTTGAAAG+GGG + chr4_4:82007146-82007165 None:intergenic 35.0%
ATGAGTTATATGTCCCACAT+TGG - chr4_4:82007462-82007481 Msa0708450:intron 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_4:82007567-82007586 None:intergenic 35.0%
ATATCTGATATGTGAGCCAA+TGG - chr4_4:82007608-82007627 Msa0708450:intron 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_4:82007627-82007646 None:intergenic 35.0%
GAAGTTGGGATGAGATTATT+TGG - chr4_4:82007849-82007868 Msa0708450:intron 35.0%
!!! AGCATGGAAGTTTTGAACTT+GGG - chr4_4:82007872-82007891 Msa0708450:intron 35.0%
CTCTTGAATAACTGTAAACC+TGG - chr4_4:82007936-82007955 Msa0708450:intron 35.0%
TAGGTTTACAATTGCTAACC+AGG + chr4_4:82007957-82007976 None:intergenic 35.0%
GTTCATTTGAGTGTGAAAGT+AGG + chr4_4:82007976-82007995 None:intergenic 35.0%
! GGGATTCAAATTGTTAGTCT+TGG + chr4_4:82008034-82008053 None:intergenic 35.0%
! GTTGATTCCATATGACATGA+AGG - chr4_4:82008251-82008270 Msa0708450:intron 35.0%
GTTGTATCCTTCATGTCATA+TGG + chr4_4:82008261-82008280 None:intergenic 35.0%
ATTACACCATACTCTAAGTG+AGG + chr4_4:82008427-82008446 None:intergenic 35.0%
TTTCATTGGTCATGTAGGAT+TGG - chr4_4:82008446-82008465 Msa0708450:intron 35.0%
AAATACCACCTTCACAATTC+AGG + chr4_4:82008542-82008561 None:intergenic 35.0%
AATTTCAAAACTCCTGGTCT+AGG + chr4_4:82008623-82008642 None:intergenic 35.0%
!!! ACCAGGAGTTTTGAAATTGA+TGG - chr4_4:82008625-82008644 Msa0708450:intron 35.0%
TCCATCAATTTCAAAACTCC+TGG + chr4_4:82008629-82008648 None:intergenic 35.0%
AAATAATCGTACAGCATCTC+TGG + chr4_4:82008657-82008676 None:intergenic 35.0%
GATGCTGTACGATTATTTAC+CGG - chr4_4:82008659-82008678 Msa0708450:intron 35.0%
! ACCGTTATACTTGATTGGTT+TGG - chr4_4:82008747-82008766 Msa0708450:intron 35.0%
! TTTTGCTCAATTACTGATGC+AGG - chr4_4:82008786-82008805 Msa0708450:intron 35.0%
TTTGCTCAATTACTGATGCA+GGG - chr4_4:82008787-82008806 Msa0708450:intron 35.0%
GTAGGCTTACAATTCCAATA+AGG + chr4_4:82008873-82008892 None:intergenic 35.0%
!! ACTTTAAGGTGATGATGTGA+AGG - chr4_4:82009118-82009137 Msa0708450:intron 35.0%
AAGCAGTCACATATATTGAC+GGG + chr4_4:82009157-82009176 None:intergenic 35.0%
GAAGCAGTCACATATATTGA+CGG + chr4_4:82009158-82009177 None:intergenic 35.0%
ATATTGTGCATTGCAGAAGT+TGG - chr4_4:82009268-82009287 Msa0708450:intron 35.0%
TATTGTGCATTGCAGAAGTT+GGG - chr4_4:82009269-82009288 Msa0708450:intron 35.0%
ATCAGAGAAAAATTGCTTGG+TGG - chr4_4:82009295-82009314 Msa0708450:intron 35.0%
!! GGATAGTGTTATTGGTTTAC+AGG - chr4_4:82009322-82009341 Msa0708450:intron 35.0%
AGCTTGTGTTAGAAAGTTAG+AGG - chr4_4:82009439-82009458 Msa0708450:intron 35.0%
GCTTGTGTTAGAAAGTTAGA+GGG - chr4_4:82009440-82009459 Msa0708450:intron 35.0%
! GTTGTTTCATCTAACCAATG+TGG + chr4_4:82009724-82009743 None:intergenic 35.0%
!! GGTATGATTTTCTAAGAGGA+TGG + chr4_4:82009779-82009798 None:intergenic 35.0%
TACACTTGATCTTAGCCAAA+AGG + chr4_4:82007567-82007586 None:intergenic 35.0%
TTTAATATCGTGTGGACCAT+TGG + chr4_4:82007627-82007646 None:intergenic 35.0%
ATTTATTTATTGAGGGGGAG+AGG - chr4_4:82009889-82009908 Msa0708450:intron 35.0%
AACTTAAGACTTCAATGGTG+GGG + chr4_4:82009987-82010006 None:intergenic 35.0%
TTGGTTTATGTGAGTAAAGC+CGG - chr4_4:82010524-82010543 Msa0708450:CDS 35.0%
ATAAACCTCAAACTTTCGAC+CGG + chr4_4:82010546-82010565 None:intergenic 35.0%
!! ATGGTTGATGAACATGACCA+TGG - chr4_4:82006189-82006208 Msa0708450:three_prime_UTR 40.0%
! ACGAAAACAGTGTCTGGTTT+GGG + chr4_4:82006272-82006291 None:intergenic 40.0%
AACGAAAACAGTGTCTGGTT+TGG + chr4_4:82006273-82006292 None:intergenic 40.0%
TGGATAACGAAAACAGTGTC+TGG + chr4_4:82006278-82006297 None:intergenic 40.0%
! CTGAGACTTTAAAGAAGACG+CGG + chr4_4:82006345-82006364 None:intergenic 40.0%
CAACTTCAGAACCAAATTGG+TGG - chr4_4:82006550-82006569 Msa0708450:CDS 40.0%
! GAAAGGAACCATCGCATTTT+GGG + chr4_4:82006583-82006602 None:intergenic 40.0%
! AGAAAGGAACCATCGCATTT+TGG + chr4_4:82006584-82006603 None:intergenic 40.0%
!! CTGAAGAGTGTCAATCAACT+TGG + chr4_4:82006792-82006811 None:intergenic 40.0%
!! CAAGTTGATTGACACTCTTC+AGG - chr4_4:82006790-82006809 Msa0708450:intron 40.0%
TCCACTGTGTAAGTGTATAG+TGG + chr4_4:82006874-82006893 None:intergenic 40.0%
GCACTAACACTTCAGATTGA+AGG + chr4_4:82006940-82006959 None:intergenic 40.0%
CCTATGAACAATGGGAAACA+TGG + chr4_4:82007034-82007053 None:intergenic 40.0%
CCATGTTTCCCATTGTTCAT+AGG - chr4_4:82007031-82007050 Msa0708450:intron 40.0%
! ATGACTAAACTTGCTTGTCC+TGG - chr4_4:82007075-82007094 Msa0708450:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_4:82007346-82007365 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_4:82007347-82007366 None:intergenic 40.0%
TGTTGCCTCACTTAAGAGTA+TGG - chr4_4:82007353-82007372 Msa0708450:intron 40.0%
AAGTCAAATGGTAGCTGCAT+TGG - chr4_4:82007405-82007424 Msa0708450:intron 40.0%
!! CACCACAATAGCTTGCTATT+GGG - chr4_4:82007670-82007689 Msa0708450:intron 40.0%
! GGATGAGATTATTTGGAGCA+TGG - chr4_4:82007856-82007875 Msa0708450:intron 40.0%
!!! GAGCATGGAAGTTTTGAACT+TGG - chr4_4:82007871-82007890 Msa0708450:intron 40.0%
GTAGTGTTAAAAGCTGGACT+TGG - chr4_4:82007906-82007925 Msa0708450:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_4:82007346-82007365 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_4:82007347-82007366 None:intergenic 40.0%
TTGTTGCCTCACTTAGAGTA+TGG - chr4_4:82008418-82008437 Msa0708450:intron 40.0%
GGAATGTGGAATATTAGGAG+AGG + chr4_4:82008521-82008540 None:intergenic 40.0%
TCCACATTCCTGAATTGTGA+AGG - chr4_4:82008531-82008550 Msa0708450:intron 40.0%
ACCTTCACAATTCAGGAATG+TGG + chr4_4:82008535-82008554 None:intergenic 40.0%
ACATTCCTGAATTGTGAAGG+TGG - chr4_4:82008534-82008553 Msa0708450:intron 40.0%
TTGCTCAATTACTGATGCAG+GGG - chr4_4:82008788-82008807 Msa0708450:intron 40.0%
CTTGTTCTCTCTATTGGAGT+AGG - chr4_4:82008900-82008919 Msa0708450:intron 40.0%
TGTTTCCTGCTCATGAGTTT+AGG - chr4_4:82009061-82009080 Msa0708450:intron 40.0%
! AGTCACATATATTGACGGGT+CGG + chr4_4:82009153-82009172 None:intergenic 40.0%
AATATATGTGACTGCTTCCC+AGG - chr4_4:82009160-82009179 Msa0708450:intron 40.0%
! GAAAAATTGCTTGGTGGTAG+AGG - chr4_4:82009301-82009320 Msa0708450:intron 40.0%
GTGGTAGAGGATAGTGTTAT+TGG - chr4_4:82009314-82009333 Msa0708450:intron 40.0%
TGTTAGAAAGTTAGAGGGCA+AGG - chr4_4:82009445-82009464 Msa0708450:intron 40.0%
! AATCCTGACTTTGTTGACTG+TGG - chr4_4:82009588-82009607 Msa0708450:intron 40.0%
TAACCACAGTCAACAAAGTC+AGG + chr4_4:82009594-82009613 None:intergenic 40.0%
TTAAGCGCATTCATCATCCA+AGG - chr4_4:82009611-82009630 Msa0708450:intron 40.0%
ATGAGTTCTATGTCCCACAT+TGG - chr4_4:82009707-82009726 Msa0708450:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG - chr4_4:82009851-82009870 Msa0708450:intron 40.0%
ATTGCTATAGTGCAACGCAA+AGG + chr4_4:82009953-82009972 None:intergenic 40.0%
TTTGCGTTGCACTATAGCAA+TGG - chr4_4:82009952-82009971 Msa0708450:intron 40.0%
TGAAATTCGGGTGGAAAAAC+TGG - chr4_4:82010227-82010246 Msa0708450:intron 40.0%
ACCTTACGTTACTCAAGTCA+GGG + chr4_4:82010321-82010340 None:intergenic 40.0%
TACCTTACGTTACTCAAGTC+AGG + chr4_4:82010322-82010341 None:intergenic 40.0%
!! ATGGTTGATGAACATGACCA+TGG - chr4_4:82006189-82006208 Msa0708450:three_prime_UTR 40.0%
! ACGAAAACAGTGTCTGGTTT+GGG + chr4_4:82006272-82006291 None:intergenic 40.0%
AACGAAAACAGTGTCTGGTT+TGG + chr4_4:82006273-82006292 None:intergenic 40.0%
TGGATAACGAAAACAGTGTC+TGG + chr4_4:82006278-82006297 None:intergenic 40.0%
! CTGAGACTTTAAAGAAGACG+CGG + chr4_4:82006345-82006364 None:intergenic 40.0%
CAACTTCAGAACCAAATTGG+TGG - chr4_4:82006550-82006569 Msa0708450:CDS 40.0%
! GAAAGGAACCATCGCATTTT+GGG + chr4_4:82006583-82006602 None:intergenic 40.0%
! AGAAAGGAACCATCGCATTT+TGG + chr4_4:82006584-82006603 None:intergenic 40.0%
!! CTGAAGAGTGTCAATCAACT+TGG + chr4_4:82006792-82006811 None:intergenic 40.0%
!! CAAGTTGATTGACACTCTTC+AGG - chr4_4:82006790-82006809 Msa0708450:intron 40.0%
TCCACTGTGTAAGTGTATAG+TGG + chr4_4:82006874-82006893 None:intergenic 40.0%
GCACTAACACTTCAGATTGA+AGG + chr4_4:82006940-82006959 None:intergenic 40.0%
CCTATGAACAATGGGAAACA+TGG + chr4_4:82007034-82007053 None:intergenic 40.0%
CCATGTTTCCCATTGTTCAT+AGG - chr4_4:82007031-82007050 Msa0708450:intron 40.0%
! ATGACTAAACTTGCTTGTCC+TGG - chr4_4:82007075-82007094 Msa0708450:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_4:82007346-82007365 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_4:82007347-82007366 None:intergenic 40.0%
TGTTGCCTCACTTAAGAGTA+TGG - chr4_4:82007353-82007372 Msa0708450:intron 40.0%
AAGTCAAATGGTAGCTGCAT+TGG - chr4_4:82007405-82007424 Msa0708450:intron 40.0%
!! CACCACAATAGCTTGCTATT+GGG - chr4_4:82007670-82007689 Msa0708450:intron 40.0%
! GGATGAGATTATTTGGAGCA+TGG - chr4_4:82007856-82007875 Msa0708450:intron 40.0%
!!! GAGCATGGAAGTTTTGAACT+TGG - chr4_4:82007871-82007890 Msa0708450:intron 40.0%
GTAGTGTTAAAAGCTGGACT+TGG - chr4_4:82007906-82007925 Msa0708450:intron 40.0%
AAGTGAGGCAACAATTGACA+GGG + chr4_4:82007346-82007365 None:intergenic 40.0%
TAAGTGAGGCAACAATTGAC+AGG + chr4_4:82007347-82007366 None:intergenic 40.0%
TTGTTGCCTCACTTAGAGTA+TGG - chr4_4:82008418-82008437 Msa0708450:intron 40.0%
GGAATGTGGAATATTAGGAG+AGG + chr4_4:82008521-82008540 None:intergenic 40.0%
TCCACATTCCTGAATTGTGA+AGG - chr4_4:82008531-82008550 Msa0708450:intron 40.0%
ACCTTCACAATTCAGGAATG+TGG + chr4_4:82008535-82008554 None:intergenic 40.0%
ACATTCCTGAATTGTGAAGG+TGG - chr4_4:82008534-82008553 Msa0708450:intron 40.0%
TTGCTCAATTACTGATGCAG+GGG - chr4_4:82008788-82008807 Msa0708450:intron 40.0%
CTTGTTCTCTCTATTGGAGT+AGG - chr4_4:82008900-82008919 Msa0708450:intron 40.0%
TGTTTCCTGCTCATGAGTTT+AGG - chr4_4:82009061-82009080 Msa0708450:intron 40.0%
! AGTCACATATATTGACGGGT+CGG + chr4_4:82009153-82009172 None:intergenic 40.0%
AATATATGTGACTGCTTCCC+AGG - chr4_4:82009160-82009179 Msa0708450:intron 40.0%
! GAAAAATTGCTTGGTGGTAG+AGG - chr4_4:82009301-82009320 Msa0708450:intron 40.0%
GTGGTAGAGGATAGTGTTAT+TGG - chr4_4:82009314-82009333 Msa0708450:intron 40.0%
TGTTAGAAAGTTAGAGGGCA+AGG - chr4_4:82009445-82009464 Msa0708450:intron 40.0%
! AATCCTGACTTTGTTGACTG+TGG - chr4_4:82009588-82009607 Msa0708450:intron 40.0%
TAACCACAGTCAACAAAGTC+AGG + chr4_4:82009594-82009613 None:intergenic 40.0%
TTAAGCGCATTCATCATCCA+AGG - chr4_4:82009611-82009630 Msa0708450:intron 40.0%
ATGAGTTCTATGTCCCACAT+TGG - chr4_4:82009707-82009726 Msa0708450:intron 40.0%
ATATCTGATATGTGGGCCAA+TGG - chr4_4:82009851-82009870 Msa0708450:intron 40.0%
ATTGCTATAGTGCAACGCAA+AGG + chr4_4:82009953-82009972 None:intergenic 40.0%
TTTGCGTTGCACTATAGCAA+TGG - chr4_4:82009952-82009971 Msa0708450:intron 40.0%
TGAAATTCGGGTGGAAAAAC+TGG - chr4_4:82010227-82010246 Msa0708450:intron 40.0%
ACCTTACGTTACTCAAGTCA+GGG + chr4_4:82010321-82010340 None:intergenic 40.0%
TACCTTACGTTACTCAAGTC+AGG + chr4_4:82010322-82010341 None:intergenic 40.0%
AGATAGGAATGGGAAGTGGA+GGG + chr4_4:82006247-82006266 None:intergenic 45.0%
GGTTTGGGAGAGATAGGAAT+GGG + chr4_4:82006257-82006276 None:intergenic 45.0%
! TGGTTTGGGAGAGATAGGAA+TGG + chr4_4:82006258-82006277 None:intergenic 45.0%
AGAAGACGCGGTGGTTATTA+CGG + chr4_4:82006333-82006352 None:intergenic 45.0%
! AGACTTTAAAGAAGACGCGG+TGG + chr4_4:82006342-82006361 None:intergenic 45.0%
ATCTGAGCACTTACATCGTC+AGG - chr4_4:82006441-82006460 Msa0708450:intron 45.0%
AGTGGTTGAGGAGAAGAAGA+TGG + chr4_4:82006505-82006524 None:intergenic 45.0%
TTCTCCTCAACCACTCAACT+GGG - chr4_4:82006510-82006529 Msa0708450:intron 45.0%
ATATCCCAGTTGAGTGGTTG+AGG + chr4_4:82006517-82006536 None:intergenic 45.0%
CTTCAGAACCAAATTGGTGG+TGG - chr4_4:82006553-82006572 Msa0708450:CDS 45.0%
! GGTACTTTAAGGAACATGGG+TGG - chr4_4:82006717-82006736 Msa0708450:CDS 45.0%
AACTCCTCCTACTAGTGATG+AGG - chr4_4:82006760-82006779 Msa0708450:intron 45.0%
GCCACTATACACTTACACAG+TGG - chr4_4:82006870-82006889 Msa0708450:intron 45.0%
! GTCAAACACACATCGGTGTT+TGG + chr4_4:82006907-82006926 None:intergenic 45.0%
GCCCCTTTCAACTATACAGT+AGG - chr4_4:82007142-82007161 Msa0708450:intron 45.0%
TGGCACCATACTCTTAAGTG+AGG + chr4_4:82007361-82007380 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_4:82007549-82007568 Msa0708450:CDS 45.0%
CCAATAGCAAGCTATTGTGG+TGG + chr4_4:82007672-82007691 None:intergenic 45.0%
!! CCACCACAATAGCTTGCTAT+TGG - chr4_4:82007669-82007688 Msa0708450:intron 45.0%
GACCCAATAGCAAGCTATTG+TGG + chr4_4:82007675-82007694 None:intergenic 45.0%
GTTGCACTATTGCAATTGCC+TGG - chr4_4:82007714-82007733 Msa0708450:CDS 45.0%
!! TTACCTTCGCATTTTGGCAC+AGG - chr4_4:82008592-82008611 Msa0708450:intron 45.0%
TTACCTGTGCCAAAATGCGA+AGG + chr4_4:82008598-82008617 None:intergenic 45.0%
TACCAGCAAGGAAGCAATCA+AGG + chr4_4:82008989-82009008 None:intergenic 45.0%
GTGATGTGCATATACCAGCA+AGG + chr4_4:82009001-82009020 None:intergenic 45.0%
TTGGTCCTAAACTCATGAGC+AGG + chr4_4:82009069-82009088 None:intergenic 45.0%
! GTCACATATATTGACGGGTC+GGG + chr4_4:82009152-82009171 None:intergenic 45.0%
GAAGCGTGGATCATTAGACT+TGG - chr4_4:82009637-82009656 Msa0708450:intron 45.0%
CGTGGATCATTAGACTTGGA+TGG - chr4_4:82009641-82009660 Msa0708450:intron 45.0%
GACTTGGATGGTTTCTGCAT+TGG - chr4_4:82009653-82009672 Msa0708450:intron 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_4:82007549-82007568 Msa0708450:CDS 45.0%
TGGCTGCATGATGACATAAC+TGG - chr4_4:82010247-82010266 Msa0708450:intron 45.0%
CAAGTCAGGGTAGATTGCTA+TGG + chr4_4:82010308-82010327 None:intergenic 45.0%
! ACCCTGACTTGAGTAACGTA+AGG - chr4_4:82010317-82010336 Msa0708450:CDS 45.0%
TAAAGCCGGTCGAAAGTTTG+AGG - chr4_4:82010538-82010557 Msa0708450:CDS 45.0%
AGATAGGAATGGGAAGTGGA+GGG + chr4_4:82006247-82006266 None:intergenic 45.0%
GGTTTGGGAGAGATAGGAAT+GGG + chr4_4:82006257-82006276 None:intergenic 45.0%
! TGGTTTGGGAGAGATAGGAA+TGG + chr4_4:82006258-82006277 None:intergenic 45.0%
AGAAGACGCGGTGGTTATTA+CGG + chr4_4:82006333-82006352 None:intergenic 45.0%
! AGACTTTAAAGAAGACGCGG+TGG + chr4_4:82006342-82006361 None:intergenic 45.0%
ATCTGAGCACTTACATCGTC+AGG - chr4_4:82006441-82006460 Msa0708450:intron 45.0%
AGTGGTTGAGGAGAAGAAGA+TGG + chr4_4:82006505-82006524 None:intergenic 45.0%
TTCTCCTCAACCACTCAACT+GGG - chr4_4:82006510-82006529 Msa0708450:intron 45.0%
ATATCCCAGTTGAGTGGTTG+AGG + chr4_4:82006517-82006536 None:intergenic 45.0%
CTTCAGAACCAAATTGGTGG+TGG - chr4_4:82006553-82006572 Msa0708450:CDS 45.0%
! GGTACTTTAAGGAACATGGG+TGG - chr4_4:82006717-82006736 Msa0708450:CDS 45.0%
AACTCCTCCTACTAGTGATG+AGG - chr4_4:82006760-82006779 Msa0708450:intron 45.0%
GCCACTATACACTTACACAG+TGG - chr4_4:82006870-82006889 Msa0708450:intron 45.0%
! GTCAAACACACATCGGTGTT+TGG + chr4_4:82006907-82006926 None:intergenic 45.0%
GCCCCTTTCAACTATACAGT+AGG - chr4_4:82007142-82007161 Msa0708450:intron 45.0%
TGGCACCATACTCTTAAGTG+AGG + chr4_4:82007361-82007380 None:intergenic 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_4:82007549-82007568 Msa0708450:CDS 45.0%
CCAATAGCAAGCTATTGTGG+TGG + chr4_4:82007672-82007691 None:intergenic 45.0%
!! CCACCACAATAGCTTGCTAT+TGG - chr4_4:82007669-82007688 Msa0708450:intron 45.0%
GACCCAATAGCAAGCTATTG+TGG + chr4_4:82007675-82007694 None:intergenic 45.0%
GTTGCACTATTGCAATTGCC+TGG - chr4_4:82007714-82007733 Msa0708450:CDS 45.0%
!! TTACCTTCGCATTTTGGCAC+AGG - chr4_4:82008592-82008611 Msa0708450:intron 45.0%
TTACCTGTGCCAAAATGCGA+AGG + chr4_4:82008598-82008617 None:intergenic 45.0%
TACCAGCAAGGAAGCAATCA+AGG + chr4_4:82008989-82009008 None:intergenic 45.0%
GTGATGTGCATATACCAGCA+AGG + chr4_4:82009001-82009020 None:intergenic 45.0%
TTGGTCCTAAACTCATGAGC+AGG + chr4_4:82009069-82009088 None:intergenic 45.0%
! GTCACATATATTGACGGGTC+GGG + chr4_4:82009152-82009171 None:intergenic 45.0%
GAAGCGTGGATCATTAGACT+TGG - chr4_4:82009637-82009656 Msa0708450:intron 45.0%
CGTGGATCATTAGACTTGGA+TGG - chr4_4:82009641-82009660 Msa0708450:intron 45.0%
GACTTGGATGGTTTCTGCAT+TGG - chr4_4:82009653-82009672 Msa0708450:intron 45.0%
! TCATACCTTTCTCGGCCTTT+TGG - chr4_4:82007549-82007568 Msa0708450:CDS 45.0%
TGGCTGCATGATGACATAAC+TGG - chr4_4:82010247-82010266 Msa0708450:intron 45.0%
CAAGTCAGGGTAGATTGCTA+TGG + chr4_4:82010308-82010327 None:intergenic 45.0%
! ACCCTGACTTGAGTAACGTA+AGG - chr4_4:82010317-82010336 Msa0708450:CDS 45.0%
TAAAGCCGGTCGAAAGTTTG+AGG - chr4_4:82010538-82010557 Msa0708450:CDS 45.0%
!!! ATATTAAATTTATTTTTTGA+GGG - chr4_4:82007639-82007658 Msa0708450:intron 5.0%
!! ATATTAAATTTATTTATTGA+GGG - chr4_4:82009882-82009901 Msa0708450:intron 5.0%
!!! ATATTAAATTTATTTTTTGA+GGG - chr4_4:82007639-82007658 Msa0708450:intron 5.0%
!! ATATTAAATTTATTTATTGA+GGG - chr4_4:82009882-82009901 Msa0708450:intron 5.0%
GTGAGTGAGAGTAGAAGCCA+TGG + chr4_4:82006209-82006228 None:intergenic 50.0%
GAGATAGGAATGGGAAGTGG+AGG + chr4_4:82006248-82006267 None:intergenic 50.0%
GGAGAGATAGGAATGGGAAG+TGG + chr4_4:82006251-82006270 None:intergenic 50.0%
!! GTGTCTGGTTTGGGAGAGAT+AGG + chr4_4:82006263-82006282 None:intergenic 50.0%
CTTCTCCTCAACCACTCAAC+TGG - chr4_4:82006509-82006528 Msa0708450:intron 50.0%
TGGGTTTGCCACCACCAATT+TGG + chr4_4:82006564-82006583 None:intergenic 50.0%
GTGGCAAACCCAAAATGCGA+TGG - chr4_4:82006572-82006591 Msa0708450:CDS 50.0%
CGTTCCTCATCACTAGTAGG+AGG + chr4_4:82006767-82006786 None:intergenic 50.0%
GCTCGTTCCTCATCACTAGT+AGG + chr4_4:82006770-82006789 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_4:82007557-82007576 None:intergenic 50.0%
GCACAGGTAAAACCTAGACC+AGG - chr4_4:82008608-82008627 Msa0708450:intron 50.0%
AGCCTTGATTGCTTCCTTGC+TGG - chr4_4:82008984-82009003 Msa0708450:intron 50.0%
ATCATCCAAGGCTTGAAGCG+TGG - chr4_4:82009623-82009642 Msa0708450:intron 50.0%
ATGATCCACGCTTCAAGCCT+TGG + chr4_4:82009631-82009650 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_4:82007557-82007576 None:intergenic 50.0%
!! CACCACGGTAGCTTGCTATT+GGG - chr4_4:82009913-82009932 Msa0708450:intron 50.0%
GTTGCACTATAGCAATGGCC+TGG - chr4_4:82009957-82009976 Msa0708450:intron 50.0%
TACAGGCAGCAACACAAGCA+GGG - chr4_4:82010114-82010133 Msa0708450:CDS 50.0%
ACAAGCAGGGATGTCTTGTG+TGG - chr4_4:82010127-82010146 Msa0708450:CDS 50.0%
GTGAGTGAGAGTAGAAGCCA+TGG + chr4_4:82006209-82006228 None:intergenic 50.0%
GAGATAGGAATGGGAAGTGG+AGG + chr4_4:82006248-82006267 None:intergenic 50.0%
GGAGAGATAGGAATGGGAAG+TGG + chr4_4:82006251-82006270 None:intergenic 50.0%
!! GTGTCTGGTTTGGGAGAGAT+AGG + chr4_4:82006263-82006282 None:intergenic 50.0%
CTTCTCCTCAACCACTCAAC+TGG - chr4_4:82006509-82006528 Msa0708450:intron 50.0%
TGGGTTTGCCACCACCAATT+TGG + chr4_4:82006564-82006583 None:intergenic 50.0%
GTGGCAAACCCAAAATGCGA+TGG - chr4_4:82006572-82006591 Msa0708450:CDS 50.0%
CGTTCCTCATCACTAGTAGG+AGG + chr4_4:82006767-82006786 None:intergenic 50.0%
GCTCGTTCCTCATCACTAGT+AGG + chr4_4:82006770-82006789 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_4:82007557-82007576 None:intergenic 50.0%
GCACAGGTAAAACCTAGACC+AGG - chr4_4:82008608-82008627 Msa0708450:intron 50.0%
AGCCTTGATTGCTTCCTTGC+TGG - chr4_4:82008984-82009003 Msa0708450:intron 50.0%
ATCATCCAAGGCTTGAAGCG+TGG - chr4_4:82009623-82009642 Msa0708450:intron 50.0%
ATGATCCACGCTTCAAGCCT+TGG + chr4_4:82009631-82009650 None:intergenic 50.0%
CTTAGCCAAAAGGCCGAGAA+AGG + chr4_4:82007557-82007576 None:intergenic 50.0%
!! CACCACGGTAGCTTGCTATT+GGG - chr4_4:82009913-82009932 Msa0708450:intron 50.0%
GTTGCACTATAGCAATGGCC+TGG - chr4_4:82009957-82009976 Msa0708450:intron 50.0%
TACAGGCAGCAACACAAGCA+GGG - chr4_4:82010114-82010133 Msa0708450:CDS 50.0%
ACAAGCAGGGATGTCTTGTG+TGG - chr4_4:82010127-82010146 Msa0708450:CDS 50.0%
TGACTGTGACGGCGTCATCT+TGG - chr4_4:82006417-82006436 Msa0708450:CDS 55.0%
! CTTTATTTGTGGGGTGCGCC+AGG + chr4_4:82007735-82007754 None:intergenic 55.0%
CCAATAGCAAGCTACCGTGG+TGG + chr4_4:82009915-82009934 None:intergenic 55.0%
!! CCACCACGGTAGCTTGCTAT+TGG - chr4_4:82009912-82009931 Msa0708450:intron 55.0%
CTACAGGCAGCAACACAAGC+AGG - chr4_4:82010113-82010132 Msa0708450:CDS 55.0%
CTCAGCGGTGGAAGATGTGT+AGG + chr4_4:82010156-82010175 None:intergenic 55.0%
TGACTGTGACGGCGTCATCT+TGG - chr4_4:82006417-82006436 Msa0708450:CDS 55.0%
! CTTTATTTGTGGGGTGCGCC+AGG + chr4_4:82007735-82007754 None:intergenic 55.0%
CCAATAGCAAGCTACCGTGG+TGG + chr4_4:82009915-82009934 None:intergenic 55.0%
!! CCACCACGGTAGCTTGCTAT+TGG - chr4_4:82009912-82009931 Msa0708450:intron 55.0%
CTACAGGCAGCAACACAAGC+AGG - chr4_4:82010113-82010132 Msa0708450:CDS 55.0%
CTCAGCGGTGGAAGATGTGT+AGG + chr4_4:82010156-82010175 None:intergenic 55.0%
GGCCCAATAGCAAGCTACCG+TGG + chr4_4:82009918-82009937 None:intergenic 60.0%
ACGCAAAGGCGACGCAAGAG+AGG + chr4_4:82009939-82009958 None:intergenic 60.0%
CACATCTTCCACCGCTGAGC+AGG - chr4_4:82010157-82010176 Msa0708450:intron 60.0%
GGCCCAATAGCAAGCTACCG+TGG + chr4_4:82009918-82009937 None:intergenic 60.0%
ACGCAAAGGCGACGCAAGAG+AGG + chr4_4:82009939-82009958 None:intergenic 60.0%
CACATCTTCCACCGCTGAGC+AGG - chr4_4:82010157-82010176 Msa0708450:intron 60.0%
TTGAGGGGGAGAGGCCACCA+CGG - chr4_4:82009898-82009917 Msa0708450:intron 65.0%
! CTTCAATGGTGGGGTGCGCC+AGG + chr4_4:82009978-82009997 None:intergenic 65.0%
CTTCCACCGCTGAGCAGGTG+AGG - chr4_4:82010162-82010181 Msa0708450:intron 65.0%
GAGGGTCCTCACCTGCTCAG+CGG + chr4_4:82010171-82010190 None:intergenic 65.0%
TTGAGGGGGAGAGGCCACCA+CGG - chr4_4:82009898-82009917 Msa0708450:intron 65.0%
! CTTCAATGGTGGGGTGCGCC+AGG + chr4_4:82009978-82009997 None:intergenic 65.0%
CTTCCACCGCTGAGCAGGTG+AGG - chr4_4:82010162-82010181 Msa0708450:intron 65.0%
GAGGGTCCTCACCTGCTCAG+CGG + chr4_4:82010171-82010190 None:intergenic 65.0%
GGTCCTCACCTGCTCAGCGG+TGG + chr4_4:82010168-82010187 None:intergenic 70.0%
GGTCCTCACCTGCTCAGCGG+TGG + chr4_4:82010168-82010187 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 82006103 82010780 82006103 ID=Msa0708450;Name=Msa0708450
chr4_4 mRNA 82006103 82010780 82006103 ID=Msa0708450-mRNA-1;Parent=Msa0708450;Name=Msa0708450-mRNA-1;_AED=0.11;_eAED=0.11;_QI=54|0.88|1|1|1|1|10|305|320
chr4_4 exon 82006103 82006456 82006103 ID=Msa0708450-mRNA-1:exon:27012;Parent=Msa0708450-mRNA-1
chr4_4 exon 82006545 82006591 82006545 ID=Msa0708450-mRNA-1:exon:27011;Parent=Msa0708450-mRNA-1
chr4_4 exon 82006705 82006764 82006705 ID=Msa0708450-mRNA-1:exon:27010;Parent=Msa0708450-mRNA-1
chr4_4 exon 82007540 82007599 82007540 ID=Msa0708450-mRNA-1:exon:27009;Parent=Msa0708450-mRNA-1
chr4_4 exon 82007702 82007757 82007702 ID=Msa0708450-mRNA-1:exon:27008;Parent=Msa0708450-mRNA-1
chr4_4 exon 82007878 82007911 82007878 ID=Msa0708450-mRNA-1:exon:27007;Parent=Msa0708450-mRNA-1
chr4_4 exon 82008001 82008075 82008001 ID=Msa0708450-mRNA-1:exon:27006;Parent=Msa0708450-mRNA-1
chr4_4 exon 82008219 82008269 82008219 ID=Msa0708450-mRNA-1:exon:27005;Parent=Msa0708450-mRNA-1
chr4_4 exon 82010072 82010165 82010072 ID=Msa0708450-mRNA-1:exon:27004;Parent=Msa0708450-mRNA-1
chr4_4 exon 82010290 82010780 82010290 ID=Msa0708450-mRNA-1:exon:27003;Parent=Msa0708450-mRNA-1
chr4_4 five_prime_UTR 82010727 82010780 82010727 ID=Msa0708450-mRNA-1:five_prime_utr;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82010290 82010726 82010290 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82010072 82010165 82010072 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82008219 82008269 82008219 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82008001 82008075 82008001 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82007878 82007911 82007878 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82007702 82007757 82007702 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82007540 82007599 82007540 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82006705 82006764 82006705 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82006545 82006591 82006545 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 CDS 82006408 82006456 82006408 ID=Msa0708450-mRNA-1:cds;Parent=Msa0708450-mRNA-1
chr4_4 three_prime_UTR 82006103 82006407 82006103 ID=Msa0708450-mRNA-1:three_prime_utr;Parent=Msa0708450-mRNA-1
Gene Sequence

>Msa0708450

ATGAATAAAGTGATGATGAAGATGAATGGTAAATGGTTGATGAACATGACCATGGCTTCTACTCTCACTCACACACTCTCTCTCACTCCCTCCACTTCCCATTCCTATCTCTCCCAAACCAGACACTGTTTTCGTTATCCAACAATTAAGTTACTTTCTTTCAACAACAATAACCGTAATAACCACCGCGTCTTCTTTAAAGTCTCAGCTTCATCTTCATCTTCATCTTCATCTTCATCTTCGTTTCAAGCTCTTATATTTGACTGTGACGGCGTCATCTTGGAATCTGAGCACTTACATCGTCAGGCTTATAATGATGCATTTCTTCACTTCAATGTTCGTTCTCCATCTTCTTCTCCTCAACCACTCAACTGGGATATAGAATTCTATGATCAACTTCAGAACCAAATTGGTGGTGGCAAACCCAAAATGCGATGGTACTTTAAGGAACATGGGTGGCCTTCATCAACGTTATTCGAAACTCCTCCTACTAGTGATGAGGAACGAGCCAAGTTGATTGACACTCTTCAGGTAAAACCTAGACCAGGAGTTTTGAAATTGATGGATGAAGCCAGAGATGCTGGGAAAAAGCTAGCTGTTTGCTCTGCTGCAACTAAAAGTTCAGTTATTCTTTGTCTTGAAAACCTTATTGGAATTGAGCGCTTTCAAAGCCTTGATTGCTTCCTTGCTGGTGATGATGTGAAGGAAAAGAAGCCCGACCCGTCAATATATGTGACTGCTTCCCAGAAGTTGGGTGTATCAGAGAAAAATTGCTTGGTGGTAGAGGATAGTGTTATTGGTTTACAGGCAGCAACACAAGCAGGGATGTCTTGTGTGGTTACCTACACATCTTCCACCGCTGAGCAGGATTTCAAAGAAGCCATAGCAATCTACCCTGACTTGAGTAACGTAAGCTTGAAAGATTTGGAGTTGCTACTTCAAGATGTTGTAGCTGCTAAATAG

Protein sequence

>Msa0708450

MNKVMMKMNGKWLMNMTMASTLTHTLSLTPSTSHSYLSQTRHCFRYPTIKLLSFNNNNRNNHRVFFKVSASSSSSSSSSSSFQALIFDCDGVILESEHLHRQAYNDAFLHFNVRSPSSSPQPLNWDIEFYDQLQNQIGGGKPKMRWYFKEHGWPSSTLFETPPTSDEERAKLIDTLQVKPRPGVLKLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQSLDCFLAGDDVKEKKPDPSIYVTASQKLGVSEKNCLVVEDSVIGLQAATQAGMSCVVTYTSSTAEQDFKEAIAIYPDLSNVSLKDLELLLQDVVAAK*