AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0435220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435220 MtrunA17_Chr3g0142141 100.000 262 0 0 1 262 1 262 0.0 551
Msa0435220 MtrunA17_Chr6g0462101 57.447 188 77 3 70 255 1 187 4.38e-76 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435220 AT1G75510.1 63.813 257 74 4 15 258 6 256 1.48e-115 332
Msa0435220 AT3G52270.1 52.569 253 104 5 16 258 23 269 8.77e-91 270
Msa0435220 AT3G52270.2 47.945 146 63 3 16 151 23 165 2.58e-39 136

Find 78 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATAAATACCTTAAAAT+TGG 0.220511 3_2:+88358581 None:intergenic
TCGACAGATTTCTTGTATTC+AGG 0.238269 3_2:+88357896 None:intergenic
GAACAAAACATCTCTATCTA+TGG 0.258008 3_2:+88357599 None:intergenic
CATGAAAACATGGATGATTA+TGG 0.267501 3_2:-88358826 Msa0435220:CDS
CAGCTCTCCCCGATCTCTTC+TGG 0.310704 3_2:+88358211 None:intergenic
TATTTGAAAGACAGCCTAAC+TGG 0.312463 3_2:-88358169 Msa0435220:CDS
TAAACTAGAAGCGTTAAAAT+AGG 0.341414 3_2:-88357425 Msa0435220:three_prime_UTR
TTTGTATCAGTTTGTTTGAC+TGG 0.345873 3_2:+88358239 None:intergenic
CTCTTGAACAAGTTGCTTCA+AGG 0.372812 3_2:+88358145 None:intergenic
AGACGATCCTGCTCATCTTC+AGG 0.374075 3_2:-88362221 Msa0435220:intron
AGATGAGCAGGATCGTCTTC+AGG 0.397793 3_2:+88362226 None:intergenic
GAAACTAAGCCAACCATTCC+AGG 0.403360 3_2:+88358606 None:intergenic
TAGAAGCGTTAAAATAGGTT+GGG 0.408303 3_2:-88357420 Msa0435220:three_prime_UTR
CAGAAGAGATCGGGGAGAGC+TGG 0.423650 3_2:-88358210 Msa0435220:CDS
CAGCTCATAAGTTCCTTGAT+TGG 0.425122 3_2:+88357922 None:intergenic
TACATTGAACGATGTAAGTA+AGG 0.444128 3_2:+88357371 None:intergenic
AAAGAGAACCAGAAGAGATC+GGG 0.447938 3_2:-88358219 Msa0435220:CDS
CATGATTTAGCAACAGCAAC+AGG 0.461744 3_2:+88362310 None:intergenic
AGTTGCTTCAAGGCCCAGTT+AGG 0.465380 3_2:+88358155 None:intergenic
AAACGACTTTAGAAAGAGGT+TGG 0.468430 3_2:+88362269 None:intergenic
TAGATTTCTTTGTCCTCTCC+CGG 0.471186 3_2:+88358794 None:intergenic
TTAGAAAGAGGTTGGGAAGG+TGG 0.474764 3_2:+88362277 None:intergenic
CTAGAAGCGTTAAAATAGGT+TGG 0.476132 3_2:-88357421 Msa0435220:three_prime_UTR
AACGACTTTAGAAAGAGGTT+GGG 0.482387 3_2:+88362270 None:intergenic
TATCAGACACAAACGAACAT+AGG 0.486644 3_2:-88362464 Msa0435220:five_prime_UTR
AATAAAAGAGGCGCCAATCA+AGG 0.487240 3_2:-88357935 Msa0435220:CDS
AAAAGAACCTGAAGATGAGC+AGG 0.488410 3_2:+88362214 None:intergenic
TTCAGGAAGAAGAGGATCAA+TGG 0.490261 3_2:+88362243 None:intergenic
ACGCACATGAGGCCAATGCC+TGG 0.492472 3_2:-88358624 Msa0435220:CDS
AAGTAGCGGTGGTTCAAACT+TGG 0.506657 3_2:-88362374 Msa0435220:CDS
GGTGACAAGGTTGCAATGGA+AGG 0.512352 3_2:-88358883 Msa0435220:CDS
CAAAGAGAACCAGAAGAGAT+CGG 0.521004 3_2:-88358220 Msa0435220:CDS
AAATGCAATTATATAAGTAC+AGG 0.524382 3_2:-88357642 Msa0435220:three_prime_UTR
AACAAAACATCTCTATCTAT+GGG 0.524670 3_2:+88357600 None:intergenic
ATGGAAAATTGTGCCGGGAG+AGG 0.527049 3_2:-88358807 Msa0435220:CDS
ATGGAAGATGAAAACAGTTA+CGG 0.527896 3_2:-88362400 Msa0435220:CDS
CAGTTTACAATGGAGATGTC+GGG 0.531136 3_2:-88360756 Msa0435220:CDS
AGTCAACGTGTTAAGTAAAG+AGG 0.531916 3_2:-88357758 Msa0435220:three_prime_UTR
AAGCCAACCATTCCAGGCAT+TGG 0.534227 3_2:+88358612 None:intergenic
TTTAGGTGACAAGGTTGCAA+TGG 0.535468 3_2:-88358887 Msa0435220:intron
TCAGTTTACAATGGAGATGT+CGG 0.537015 3_2:-88360757 Msa0435220:intron
CTGTTGCTGTTGCTAAATCA+TGG 0.543342 3_2:-88362309 Msa0435220:CDS
AGAAGCGTTAAAATAGGTTG+GGG 0.544194 3_2:-88357419 Msa0435220:three_prime_UTR
ATCAGACACAAACGAACATA+GGG 0.550503 3_2:-88362463 Msa0435220:five_prime_UTR
TTGTGTGTATACAATAAAAG+AGG 0.555378 3_2:-88357947 Msa0435220:CDS
AGATCGATCAAGAATCAAGA+TGG 0.555997 3_2:-88362419 Msa0435220:exon
TTGGCCTCATGTGCGTTCCA+CGG 0.560162 3_2:+88358631 None:intergenic
ATAATTATGTCAGTTTACAA+TGG 0.563019 3_2:-88360766 Msa0435220:intron
GGATCGTCTTCAGGAAGAAG+AGG 0.578158 3_2:+88362235 None:intergenic
AACAGTTACGGTGGAAGTAG+CGG 0.579345 3_2:-88362388 Msa0435220:CDS
AGGCCAATGCCTGGAATGGT+TGG 0.582117 3_2:-88358615 Msa0435220:CDS
AAGAGATCGGGGAGAGCTGG+AGG 0.583017 3_2:-88358207 Msa0435220:CDS
TCTGTCTTACAATTTACCGC+AGG 0.584122 3_2:-88357506 Msa0435220:three_prime_UTR
ATGATTATGGAAAATTGTGC+CGG 0.587668 3_2:-88358813 Msa0435220:CDS
TAGTCTGTGAAGTGAACACT+AGG 0.599847 3_2:+88357446 None:intergenic
CATGAGGCCAATGCCTGGAA+TGG 0.600183 3_2:-88358619 Msa0435220:CDS
ATTTGAAAGACAGCCTAACT+GGG 0.604731 3_2:-88358168 Msa0435220:CDS
ATGACCGTGGAACGCACATG+AGG 0.615692 3_2:-88358635 Msa0435220:CDS
GTGACAAGGTTGCAATGGAA+GGG 0.623466 3_2:-88358882 Msa0435220:CDS
CGAACATAGGGAGTAGGTGA+AGG 0.627364 3_2:-88362451 Msa0435220:five_prime_UTR
AACTCTTGTAGGATAAGAAG+AGG 0.627476 3_2:-88358268 Msa0435220:intron
TGATTATGGAAAATTGTGCC+GGG 0.629025 3_2:-88358812 Msa0435220:CDS
ACTTTAGAAAGAGGTTGGGA+AGG 0.632428 3_2:+88362274 None:intergenic
GAAGTCAAATAAAATTGACT+AGG 0.632493 3_2:-88362500 Msa0435220:five_prime_UTR
TTCAAACTTGGAGACATCGA+AGG 0.637014 3_2:-88362362 Msa0435220:CDS
AAGAGAACCAGAAGAGATCG+GGG 0.640560 3_2:-88358218 Msa0435220:CDS
GAAGCCACGTCATGAAAACA+TGG 0.640897 3_2:-88358836 Msa0435220:CDS
TTGTAACGTTAGTACAACGT+TGG 0.642612 3_2:+88357474 None:intergenic
AAGATTATTGCTGATGACCG+TGG 0.649545 3_2:-88358648 Msa0435220:CDS
ATCTTCTCTGAGACAAGCGA+AGG 0.651215 3_2:-88360666 Msa0435220:intron
AGTTACGGTGGAAGTAGCGG+TGG 0.667128 3_2:-88362385 Msa0435220:CDS
GAAGATGAAAACAGTTACGG+TGG 0.674861 3_2:-88362397 Msa0435220:CDS
CACAAACGAACATAGGGAGT+AGG 0.674992 3_2:-88362457 Msa0435220:five_prime_UTR
GTCTCAGAGAAGATGCACAT+AGG 0.676365 3_2:+88360675 None:intergenic
TACGAAGTTAGAGAAATACA+AGG 0.687925 3_2:+88357840 None:intergenic
ACGTTGGATATATATACCTG+CGG 0.708145 3_2:+88357490 None:intergenic
TCAAGAGACTGATCAACCTG+CGG 0.732985 3_2:-88358129 Msa0435220:intron
CGAAGGCAGAGAGATCTGTG+TGG 0.779053 3_2:-88362345 Msa0435220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATTAATTAATTAATT+AGG + chr3_2:88357803-88357822 None:intergenic 0.0%
!! TATTAATTAATTAATCATTC+AGG - chr3_2:88357819-88357838 Msa0435220:three_prime_UTR 10.0%
!! AAAAAATTATTAATTACTTG+GGG + chr3_2:88359952-88359971 None:intergenic 10.0%
!!! TTAATTTCTTATTTTAATCA+TGG + chr3_2:88360430-88360449 None:intergenic 10.0%
!! ATGATTAAAATAAGAAATTA+AGG - chr3_2:88360429-88360448 Msa0435220:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+TGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360506-88360525 None:intergenic 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360530-88360549 None:intergenic 100.0%
!!! AATATAGATTTTCAACTATT+TGG - chr3_2:88357842-88357861 Msa0435220:three_prime_UTR 15.0%
!!! ACAATTTAATTTATTACACT+TGG + chr3_2:88358178-88358197 None:intergenic 15.0%
!!! CACAATTTTTCATATTAATT+GGG + chr3_2:88358487-88358506 None:intergenic 15.0%
!! ATCAATTACAATTTCATAAT+TGG - chr3_2:88359260-88359279 Msa0435220:intron 15.0%
!! CATAATATTTGAACAAAAAT+CGG + chr3_2:88359890-88359909 None:intergenic 15.0%
!! TAAAAAAGAAAATGAAATGA+AGG + chr3_2:88360065-88360084 None:intergenic 15.0%
!! TAAGATAATTATTGAATCTT+TGG - chr3_2:88361163-88361182 Msa0435220:intron 15.0%
!! CAAAATAAATACCTTAAAAT+TGG + chr3_2:88361274-88361293 None:intergenic 15.0%
!! AATGCGAAAATAAAATAAAA+CGG + chr3_2:88361765-88361784 None:intergenic 15.0%
!!! TACTTATATAATTGCATTTT+AGG + chr3_2:88362209-88362228 None:intergenic 15.0%
!! AATTAAATTGTCGAGTTAAT+TGG - chr3_2:88358187-88358206 Msa0435220:CDS 20.0%
!! TATAAATCAATTCTCATGTT+TGG + chr3_2:88358298-88358317 None:intergenic 20.0%
!! TTTATAAACCTAGTTATTCA+TGG - chr3_2:88358312-88358331 Msa0435220:intron 20.0%
!!! GCACAATTTTTCATATTAAT+TGG + chr3_2:88358488-88358507 None:intergenic 20.0%
!! CAAAACATTTCCATATTTAA+AGG - chr3_2:88358890-88358909 Msa0435220:intron 20.0%
!! AATAAGCAATCCTTTAAATA+TGG + chr3_2:88358903-88358922 None:intergenic 20.0%
!! TATTATGACATTCATATTTG+TGG - chr3_2:88358945-88358964 Msa0435220:intron 20.0%
!! ATAATTATGTCAGTTTACAA+TGG - chr3_2:88359086-88359105 Msa0435220:intron 20.0%
!!! ATATTCAAAGAATACGTTTT+TGG + chr3_2:88359141-88359160 None:intergenic 20.0%
!! ATAACATAATATTTGAACCA+TGG + chr3_2:88359828-88359847 None:intergenic 20.0%
!!! AAACAAATGAAAGTAGATTT+TGG + chr3_2:88359988-88360007 None:intergenic 20.0%
!! ATTCCATTAAGTTTCAATTA+TGG + chr3_2:88360213-88360232 None:intergenic 20.0%
!!! TCAAAAAGTATTGAAAAAGT+AGG + chr3_2:88360293-88360312 None:intergenic 20.0%
!! TGCAATGTATTTATTATCTT+CGG - chr3_2:88360327-88360346 Msa0435220:intron 20.0%
!! AGTTGAAATTCATAAAACAA+AGG + chr3_2:88360708-88360727 None:intergenic 20.0%
!! CATTAGAAATAAAAGAACAT+TGG + chr3_2:88360768-88360787 None:intergenic 20.0%
!!! AACAGTTTTACCTTTATTTT+AGG - chr3_2:88360948-88360967 Msa0435220:intron 20.0%
!!! TTTTACTTATATTAAGTACC+TGG - chr3_2:88361326-88361345 Msa0435220:intron 20.0%
!!! GTTTTATTTTATTTTCGCAT+TGG - chr3_2:88361764-88361783 Msa0435220:intron 20.0%
!! TACATATATAAATGCATTGA+AGG - chr3_2:88361825-88361844 Msa0435220:intron 20.0%
!! AAATGCAATTATATAAGTAC+AGG - chr3_2:88362210-88362229 Msa0435220:intron 20.0%
! GAAGTCAAATAAAATTGACT+AGG - chr3_2:88357352-88357371 Msa0435220:three_prime_UTR 25.0%
! AAGTGATTAAACCAAAATCA+GGG + chr3_2:88357692-88357711 None:intergenic 25.0%
! AAAGTGATTAAACCAAAATC+AGG + chr3_2:88357693-88357712 None:intergenic 25.0%
!! TACTTGTTAGATTAGATTGT+AGG - chr3_2:88357714-88357733 Msa0435220:three_prime_UTR 25.0%
!!! ACTTTGATTTTATGCTGTTT+AGG - chr3_2:88357762-88357781 Msa0435220:three_prime_UTR 25.0%
!!! AATTGGTTTTCCAGATTAAT+CGG - chr3_2:88358055-88358074 Msa0435220:intron 25.0%
!! TCACTGTGATTTAACAATTT+TGG - chr3_2:88358815-88358834 Msa0435220:CDS 25.0%
!! CACTGTGATTTAACAATTTT+GGG - chr3_2:88358816-88358835 Msa0435220:CDS 25.0%
! GTAAACTGACATAATTATGA+AGG + chr3_2:88359084-88359103 None:intergenic 25.0%
!!! TGAAATTGTAATTGATGATG+AGG + chr3_2:88359256-88359275 None:intergenic 25.0%
!! TTTTATATTACATGTCTGCA+TGG + chr3_2:88359362-88359381 None:intergenic 25.0%
!! TGATGATTTCATCAGTTTTA+TGG - chr3_2:88359386-88359405 Msa0435220:intron 25.0%
!!! CAGTTTTATGGTTCAAATTA+TGG - chr3_2:88359398-88359417 Msa0435220:intron 25.0%
! TCTAGATTCAAATTGTGAAT+TGG - chr3_2:88359429-88359448 Msa0435220:intron 25.0%
!! TTGAATCTTGAATTAGTTTG+AGG + chr3_2:88359541-88359560 None:intergenic 25.0%
! ATCAAATGACAAAAGAAAAG+TGG - chr3_2:88359568-88359587 Msa0435220:intron 25.0%
! CAAAATTGACAAGTAAAAAG+TGG - chr3_2:88359600-88359619 Msa0435220:intron 25.0%
! AAGTTTATGTAGTGATTCAT+TGG - chr3_2:88359634-88359653 Msa0435220:intron 25.0%
! TGTGATTCATCATAATGAAT+TGG - chr3_2:88359689-88359708 Msa0435220:intron 25.0%
! TTATGCAGTTCAAAAAACAA+AGG - chr3_2:88360113-88360132 Msa0435220:intron 25.0%
! TTGCCATAATTGAAACTTAA+TGG - chr3_2:88360207-88360226 Msa0435220:intron 25.0%
! CTCAAATATACAACACAATA+TGG + chr3_2:88360242-88360261 None:intergenic 25.0%
! CTACACAACTATATTATTGT+TGG - chr3_2:88360374-88360393 Msa0435220:intron 25.0%
! AAAGAAAAGGTCAAAAATTC+GGG + chr3_2:88360549-88360568 None:intergenic 25.0%
! GAAAGAAAAGGTCAAAAATT+CGG + chr3_2:88360550-88360569 None:intergenic 25.0%
!! ATTTTTGACCTTTTCTTTCA+TGG - chr3_2:88360551-88360570 Msa0435220:intron 25.0%
!! CTTAGTTTCATCCAATTTTA+AGG - chr3_2:88361260-88361279 Msa0435220:intron 25.0%
! AAATCACAATAAGAGTTCAT+TGG - chr3_2:88361473-88361492 Msa0435220:intron 25.0%
! TTGTGTGTATACAATAAAAG+AGG - chr3_2:88361905-88361924 Msa0435220:intron 25.0%
!! TTTCTTTTTCTTTGTTGAGA+TGG - chr3_2:88362067-88362086 Msa0435220:intron 25.0%
! AACAAAACATCTCTATCTAT+GGG + chr3_2:88362255-88362274 None:intergenic 25.0%
!!! TAAACTAGAAGCGTTAAAAT+AGG - chr3_2:88362427-88362446 Msa0435220:five_prime_UTR 25.0%
!!! AGACTTTTTTTTTCTTCTTC+TGG - chr3_2:88362508-88362527 Msa0435220:five_prime_UTR 25.0%
ATGGAAGATGAAAACAGTTA+CGG - chr3_2:88357452-88357471 Msa0435220:three_prime_UTR 30.0%
! GAAAAAACGACTTTAGAAAG+AGG + chr3_2:88357590-88357609 None:intergenic 30.0%
! ATCCTATGCAATTGCAATTT+TGG - chr3_2:88357909-88357928 Msa0435220:CDS 30.0%
AACCAAAATTGCAATTGCAT+AGG + chr3_2:88357914-88357933 None:intergenic 30.0%
TGCAAATCAAATTCCATGTT+TGG + chr3_2:88358240-88358259 None:intergenic 30.0%
ATATAGCACCATGAATAACT+AGG + chr3_2:88358323-88358342 None:intergenic 30.0%
!! TAGTTATTCATGGTGCTATA+TGG - chr3_2:88358322-88358341 Msa0435220:intron 30.0%
GTAATTGAAATCCAAATGAG+CGG + chr3_2:88358382-88358401 None:intergenic 30.0%
TCCATGTATAATATACCAAC+TGG - chr3_2:88358647-88358666 Msa0435220:CDS 30.0%
! ACCAGTTGGTATATTATACA+TGG + chr3_2:88358651-88358670 None:intergenic 30.0%
ATATGCAAAAAAACACCAGT+TGG + chr3_2:88358665-88358684 None:intergenic 30.0%
TGAATCATGATTTGAAGAGT+AGG - chr3_2:88358695-88358714 Msa0435220:intron 30.0%
TAGTAATCAATCCTGGAAAA+TGG + chr3_2:88358860-88358879 None:intergenic 30.0%
! ATTTTCCAGGATTGATTACT+AGG - chr3_2:88358859-88358878 Msa0435220:CDS 30.0%
CGATTCATGAATGGAAAAAA+AGG + chr3_2:88359459-88359478 None:intergenic 30.0%
!! TTATGTTTTGCTATGTCACA+AGG + chr3_2:88359484-88359503 None:intergenic 30.0%
AATGACAAAAGAAAAGTGGT+TGG - chr3_2:88359572-88359591 Msa0435220:intron 30.0%
ATTGACAAGTAAAAAGTGGT+TGG - chr3_2:88359604-88359623 Msa0435220:intron 30.0%
ATATTTGAACCATGGTTAAC+TGG + chr3_2:88359820-88359839 None:intergenic 30.0%
! TATTGCTGATTATGTTGAGT+TGG - chr3_2:88359845-88359864 Msa0435220:intron 30.0%
TATAGTTGTGTAGTAGATCA+AGG + chr3_2:88360367-88360386 None:intergenic 30.0%
! GAGACTATGCTTTTATATCT+GGG - chr3_2:88360396-88360415 Msa0435220:intron 30.0%
AAGAAAAGGTCAAAAATTCG+GGG + chr3_2:88360548-88360567 None:intergenic 30.0%
! AAAGTGTCATGTGGAAAAAA+AGG + chr3_2:88360580-88360599 None:intergenic 30.0%
!! CACAATTAAAAAGTGTCATG+TGG + chr3_2:88360589-88360608 None:intergenic 30.0%
AGAATAATTCTTCAGTTCAG+AGG + chr3_2:88360620-88360639 None:intergenic 30.0%
AAAAGTAGATCTGACATAGA+AGG - chr3_2:88360681-88360700 Msa0435220:CDS 30.0%
! CTTTTACTGTGATAACTGAA+AGG + chr3_2:88360907-88360926 None:intergenic 30.0%
TAAAACTGTTACCAAACTCA+AGG + chr3_2:88360938-88360957 None:intergenic 30.0%
!!! TACCTTTATTTTAGGTGACA+AGG - chr3_2:88360956-88360975 Msa0435220:intron 30.0%
AACCTTGTCACCTAAAATAA+AGG + chr3_2:88360961-88360980 None:intergenic 30.0%
CATGAAAACATGGATGATTA+TGG - chr3_2:88361026-88361045 Msa0435220:intron 30.0%
ATGATTATGGAAAATTGTGC+CGG - chr3_2:88361039-88361058 Msa0435220:intron 30.0%
GATTAAAAATCGTCAAGTAC+AGG - chr3_2:88361082-88361101 Msa0435220:intron 30.0%
ACAATTAAGCGATAGTTCAA+TGG + chr3_2:88361124-88361143 None:intergenic 30.0%
ATAATCTTCCAGTTGAATCA+AGG + chr3_2:88361192-88361211 None:intergenic 30.0%
GTAAAAGTTAACATGAGCAA+TGG + chr3_2:88361312-88361331 None:intergenic 30.0%
TACTTATATTAAGTACCTGG+CGG - chr3_2:88361329-88361348 Msa0435220:intron 30.0%
! TTTGTATCAGTTTGTTTGAC+TGG + chr3_2:88361616-88361635 None:intergenic 30.0%
TACGAAGTTAGAGAAATACA+AGG + chr3_2:88362015-88362034 None:intergenic 30.0%
GAACAAAACATCTCTATCTA+TGG + chr3_2:88362256-88362275 None:intergenic 30.0%
!! TAGAAGCGTTAAAATAGGTT+GGG - chr3_2:88362432-88362451 Msa0435220:five_prime_UTR 30.0%
TACATTGAACGATGTAAGTA+AGG + chr3_2:88362484-88362503 None:intergenic 30.0%
TATCAGACACAAACGAACAT+AGG - chr3_2:88357388-88357407 Msa0435220:three_prime_UTR 35.0%
ATCAGACACAAACGAACATA+GGG - chr3_2:88357389-88357408 Msa0435220:three_prime_UTR 35.0%
AGATCGATCAAGAATCAAGA+TGG - chr3_2:88357433-88357452 Msa0435220:three_prime_UTR 35.0%
! AACGACTTTAGAAAGAGGTT+GGG + chr3_2:88357585-88357604 None:intergenic 35.0%
! AAACGACTTTAGAAAGAGGT+TGG + chr3_2:88357586-88357605 None:intergenic 35.0%
! TCTTTCACTATCCCTGATTT+TGG - chr3_2:88357678-88357697 Msa0435220:three_prime_UTR 35.0%
TAAACTTGATATCCAACCCA+AGG + chr3_2:88358082-88358101 None:intergenic 35.0%
AATCAAATTCCATGTTTGGC+TGG + chr3_2:88358236-88358255 None:intergenic 35.0%
GCATTAAATTACAGAAGTCG+CGG - chr3_2:88358440-88358459 Msa0435220:intron 35.0%
ATCTATATGAAGTGGACAAG+TGG + chr3_2:88358600-88358619 None:intergenic 35.0%
ACTTGTCCACTTCATATAGA+TGG - chr3_2:88358599-88358618 Msa0435220:CDS 35.0%
TAGTTGCCATCTATATGAAG+TGG + chr3_2:88358608-88358627 None:intergenic 35.0%
! GAATCTCGATTTGATAACCA+TGG - chr3_2:88358736-88358755 Msa0435220:intron 35.0%
TTAAAAGTTTGTGGCAACCA+TGG + chr3_2:88358756-88358775 None:intergenic 35.0%
! GGCAAAATGAGTTTTTGCAT+GGG + chr3_2:88358780-88358799 None:intergenic 35.0%
CAGTGAAACATTCAAATCGA+GGG + chr3_2:88358801-88358820 None:intergenic 35.0%
ACAGTGAAACATTCAAATCG+AGG + chr3_2:88358802-88358821 None:intergenic 35.0%
AAGAACCTAGTAATCAATCC+TGG + chr3_2:88358867-88358886 None:intergenic 35.0%
TCAGTTTACAATGGAGATGT+CGG - chr3_2:88359095-88359114 Msa0435220:intron 35.0%
GTGATTCATTGGAATGAATC+AGG - chr3_2:88359645-88359664 Msa0435220:intron 35.0%
TTGTAAGATCCAGTTAACCA+TGG - chr3_2:88359808-88359827 Msa0435220:intron 35.0%
ATGCCTCTAATCTAATATCG+TGG - chr3_2:88360038-88360057 Msa0435220:intron 35.0%
CAGTTCAAAAAACAAAGGTG+AGG - chr3_2:88360118-88360137 Msa0435220:intron 35.0%
! GGAGACTATGCTTTTATATC+TGG - chr3_2:88360395-88360414 Msa0435220:intron 35.0%
!! ACCTCTTGCAGTTTTATATG+AGG - chr3_2:88360477-88360496 Msa0435220:intron 35.0%
TCCTCATATAAAACTGCAAG+AGG + chr3_2:88360481-88360500 None:intergenic 35.0%
AGAAAAGGTCAAAAATTCGG+GGG + chr3_2:88360547-88360566 None:intergenic 35.0%
AAAGGTGACCATGAAAGAAA+AGG + chr3_2:88360562-88360581 None:intergenic 35.0%
!!! GCACTCGTCACTTTTTTTTA+GGG + chr3_2:88360861-88360880 None:intergenic 35.0%
!!! AGCACTCGTCACTTTTTTTT+AGG + chr3_2:88360862-88360881 None:intergenic 35.0%
CAGTTATCACAGTAAAAGCT+TGG - chr3_2:88360909-88360928 Msa0435220:intron 35.0%
TGATTATGGAAAATTGTGCC+GGG - chr3_2:88361040-88361059 Msa0435220:intron 35.0%
! TTTGGTTTCCTTGATTCAAC+TGG - chr3_2:88361181-88361200 Msa0435220:intron 35.0%
GTATGATACAGTAGATTCTC+AGG - chr3_2:88361414-88361433 Msa0435220:intron 35.0%
AGTTCATTGGAATTGATCCT+TGG - chr3_2:88361486-88361505 Msa0435220:intron 35.0%
!! TACTCTTCTGAAACTCTTGT+AGG - chr3_2:88361573-88361592 Msa0435220:intron 35.0%
AACTCTTGTAGGATAAGAAG+AGG - chr3_2:88361584-88361603 Msa0435220:intron 35.0%
TATTTGAAAGACAGCCTAAC+TGG - chr3_2:88361683-88361702 Msa0435220:intron 35.0%
ATTTGAAAGACAGCCTAACT+GGG - chr3_2:88361684-88361703 Msa0435220:intron 35.0%
CCAAAAAAAAAACATACCGC+AGG + chr3_2:88361742-88361761 None:intergenic 35.0%
!!! CCTGCGGTATGTTTTTTTTT+TGG - chr3_2:88361739-88361758 Msa0435220:intron 35.0%
TCGACAGATTTCTTGTATTC+AGG + chr3_2:88361959-88361978 None:intergenic 35.0%
AGTCAACGTGTTAAGTAAAG+AGG - chr3_2:88362094-88362113 Msa0435220:intron 35.0%
!!! ATCGTGCCTGTATTAGTTTT+TGG - chr3_2:88362311-88362330 Msa0435220:CDS 35.0%
!!! TGCCTGTATTAGTTTTTGGA+GGG - chr3_2:88362315-88362334 Msa0435220:CDS 35.0%
ACGTTGGATATATATACCTG+CGG + chr3_2:88362365-88362384 None:intergenic 35.0%
TTGTAACGTTAGTACAACGT+TGG + chr3_2:88362381-88362400 None:intergenic 35.0%
!! CTAGAAGCGTTAAAATAGGT+TGG - chr3_2:88362431-88362450 Msa0435220:five_prime_UTR 35.0%
!! AGAAGCGTTAAAATAGGTTG+GGG - chr3_2:88362433-88362452 Msa0435220:five_prime_UTR 35.0%
GAAGATGAAAACAGTTACGG+TGG - chr3_2:88357455-88357474 Msa0435220:three_prime_UTR 40.0%
TTCAAACTTGGAGACATCGA+AGG - chr3_2:88357490-88357509 Msa0435220:three_prime_UTR 40.0%
CATGATTTAGCAACAGCAAC+AGG + chr3_2:88357545-88357564 None:intergenic 40.0%
! CTGTTGCTGTTGCTAAATCA+TGG - chr3_2:88357543-88357562 Msa0435220:three_prime_UTR 40.0%
! ACTTTAGAAAGAGGTTGGGA+AGG + chr3_2:88357581-88357600 None:intergenic 40.0%
TTCAGGAAGAAGAGGATCAA+TGG + chr3_2:88357612-88357631 None:intergenic 40.0%
AAAAGAACCTGAAGATGAGC+AGG + chr3_2:88357641-88357660 None:intergenic 40.0%
ATTCAAACTGAGACCTAGAG+AGG + chr3_2:88357962-88357981 None:intergenic 40.0%
! AGCTTTGCTATGCCTCAATT+GGG - chr3_2:88358025-88358044 Msa0435220:intron 40.0%
TTTCCAGATTAATCGGTCCT+TGG - chr3_2:88358062-88358081 Msa0435220:intron 40.0%
TTCCAGATTAATCGGTCCTT+GGG - chr3_2:88358063-88358082 Msa0435220:intron 40.0%
TGGCGTATATTCGAGGTTAA+TGG + chr3_2:88358216-88358235 None:intergenic 40.0%
AATGCAACGAATGCTGCTAT+AGG + chr3_2:88358425-88358444 None:intergenic 40.0%
TGCATGGGCTTAAAAGTTTG+TGG + chr3_2:88358765-88358784 None:intergenic 40.0%
! GGGCAAAATGAGTTTTTGCA+TGG + chr3_2:88358781-88358800 None:intergenic 40.0%
! ATATTTGTGGACTGTGCACT+AGG - chr3_2:88358958-88358977 Msa0435220:intron 40.0%
TGACTGTCTTAAAGCAACAC+AGG + chr3_2:88359048-88359067 None:intergenic 40.0%
CAGTTTACAATGGAGATGTC+GGG - chr3_2:88359096-88359115 Msa0435220:intron 40.0%
CACAAGGTTCGATTCATGAA+TGG + chr3_2:88359468-88359487 None:intergenic 40.0%
ATCTCTAGCGTGTATCTATG+CGG + chr3_2:88359736-88359755 None:intergenic 40.0%
! CGCTAGAGATTTGTATCGAT+TGG - chr3_2:88359746-88359765 Msa0435220:intron 40.0%
!! TGCTGATTATGTTGAGTTGG+TGG - chr3_2:88359848-88359867 Msa0435220:intron 40.0%
! GATTAGAGGCATAGAGTTGA+AGG + chr3_2:88360030-88360049 None:intergenic 40.0%
GGACCACGATATTAGATTAG+AGG + chr3_2:88360044-88360063 None:intergenic 40.0%
TTGTGTAGTAGATCAAGGAG+GGG + chr3_2:88360362-88360381 None:intergenic 40.0%
GTTGTGTAGTAGATCAAGGA+GGG + chr3_2:88360363-88360382 None:intergenic 40.0%
AGTTGTGTAGTAGATCAAGG+AGG + chr3_2:88360364-88360383 None:intergenic 40.0%
AAAAGGTCAAAAATTCGGGG+GGG + chr3_2:88360545-88360564 None:intergenic 40.0%
GAAAAGGTCAAAAATTCGGG+GGG + chr3_2:88360546-88360565 None:intergenic 40.0%
TTTCTTATCCTGTGCCCTTA+GGG - chr3_2:88360820-88360839 Msa0435220:intron 40.0%
AAGCTTGGTTTCCTTGAGTT+TGG - chr3_2:88360924-88360943 Msa0435220:intron 40.0%
TTTAGGTGACAAGGTTGCAA+TGG - chr3_2:88360965-88360984 Msa0435220:intron 40.0%
! TCATCCATGTTTTCATGACG+TGG + chr3_2:88361023-88361042 None:intergenic 40.0%
TAGATTTCTTTGTCCTCTCC+CGG + chr3_2:88361061-88361080 None:intergenic 40.0%
AAGATTATTGCTGATGACCG+TGG - chr3_2:88361204-88361223 Msa0435220:intron 40.0%
TTGGAATTGATCCTTGGAGA+AGG - chr3_2:88361492-88361511 Msa0435220:intron 40.0%
CATGCATGGAGTAATTCTGT+GGG - chr3_2:88361541-88361560 Msa0435220:intron 40.0%
ATGCATGGAGTAATTCTGTG+GGG - chr3_2:88361542-88361561 Msa0435220:intron 40.0%
CAAAGAGAACCAGAAGAGAT+CGG - chr3_2:88361632-88361651 Msa0435220:intron 40.0%
AAAGAGAACCAGAAGAGATC+GGG - chr3_2:88361633-88361652 Msa0435220:intron 40.0%
CTCTTGAACAAGTTGCTTCA+AGG + chr3_2:88361710-88361729 None:intergenic 40.0%
! GCATTGGAACACTCTGATTT+TGG - chr3_2:88361780-88361799 Msa0435220:intron 40.0%
!!! ATTTTGGTTTCTCACAGCTC+TGG - chr3_2:88361796-88361815 Msa0435220:intron 40.0%
ATTGCTGCAGCAGAAATAGT+GGG + chr3_2:88361862-88361881 None:intergenic 40.0%
AATTGCTGCAGCAGAAATAG+TGG + chr3_2:88361863-88361882 None:intergenic 40.0%
!! AATAAAAGAGGCGCCAATCA+AGG - chr3_2:88361917-88361936 Msa0435220:intron 40.0%
CAGCTCATAAGTTCCTTGAT+TGG + chr3_2:88361933-88361952 None:intergenic 40.0%
! TCTCGATCTTCTTTTCAGTG+AGG + chr3_2:88362041-88362060 None:intergenic 40.0%
!!! GTGCCTGTATTAGTTTTTGG+AGG - chr3_2:88362314-88362333 Msa0435220:CDS 40.0%
TGCCCTCCAAAAACTAATAC+AGG + chr3_2:88362320-88362339 None:intergenic 40.0%
TCTGTCTTACAATTTACCGC+AGG - chr3_2:88362346-88362365 Msa0435220:CDS 40.0%
TAGTCTGTGAAGTGAACACT+AGG + chr3_2:88362409-88362428 None:intergenic 40.0%
CACAAACGAACATAGGGAGT+AGG - chr3_2:88357395-88357414 Msa0435220:three_prime_UTR 45.0%
AACAGTTACGGTGGAAGTAG+CGG - chr3_2:88357464-88357483 Msa0435220:three_prime_UTR 45.0%
AAGTAGCGGTGGTTCAAACT+TGG - chr3_2:88357478-88357497 Msa0435220:three_prime_UTR 45.0%
TTAGAAAGAGGTTGGGAAGG+TGG + chr3_2:88357578-88357597 None:intergenic 45.0%
TGGTCCAACACAAGAACTGT+TGG + chr3_2:88357995-88358014 None:intergenic 45.0%
TTGTGTTGGACCAGTCCATA+TGG - chr3_2:88358002-88358021 Msa0435220:intron 45.0%
TAGCAAAGCTCCATATGGAC+TGG + chr3_2:88358015-88358034 None:intergenic 45.0%
AGGCATAGCAAAGCTCCATA+TGG + chr3_2:88358020-88358039 None:intergenic 45.0%
! GAGCTTTGCTATGCCTCAAT+TGG - chr3_2:88358024-88358043 Msa0435220:intron 45.0%
TTGCTATGCCTCAATTGGGA+CGG - chr3_2:88358029-88358048 Msa0435220:intron 45.0%
AACCCAAGGACCGATTAATC+TGG + chr3_2:88358068-88358087 None:intergenic 45.0%
AGATTAATCGGTCCTTGGGT+TGG - chr3_2:88358067-88358086 Msa0435220:intron 45.0%
GAATATACGCCAGCCAAACA+TGG - chr3_2:88358224-88358243 Msa0435220:CDS 45.0%
! GCTATATGGCTGTGCTATTG+CGG - chr3_2:88358336-88358355 Msa0435220:intron 45.0%
CAATCCTGGAAAATGGCACA+TGG + chr3_2:88358853-88358872 None:intergenic 45.0%
GTCTCAGAGAAGATGCACAT+AGG + chr3_2:88359180-88359199 None:intergenic 45.0%
!! ATCTTCTCTGAGACAAGCGA+AGG - chr3_2:88359186-88359205 Msa0435220:intron 45.0%
GAGGTTTCACTGCTACAAAG+TGG + chr3_2:88360462-88360481 None:intergenic 45.0%
AAAGGTCAAAAATTCGGGGG+GGG + chr3_2:88360544-88360563 None:intergenic 45.0%
GTTTCTTATCCTGTGCCCTT+AGG - chr3_2:88360819-88360838 Msa0435220:intron 45.0%
! CTTGCTAACTTGTGCCCTAA+GGG + chr3_2:88360837-88360856 None:intergenic 45.0%
! TCTTGCTAACTTGTGCCCTA+AGG + chr3_2:88360838-88360857 None:intergenic 45.0%
GTGACAAGGTTGCAATGGAA+GGG - chr3_2:88360970-88360989 Msa0435220:intron 45.0%
GAAGCCACGTCATGAAAACA+TGG - chr3_2:88361016-88361035 Msa0435220:intron 45.0%
GAAACTAAGCCAACCATTCC+AGG + chr3_2:88361249-88361268 None:intergenic 45.0%
ATATTAAGTACCTGGCGGTG+TGG - chr3_2:88361334-88361353 Msa0435220:intron 45.0%
GAAGGAACAAACCTTCTCCA+AGG + chr3_2:88361506-88361525 None:intergenic 45.0%
ATGCACACACGCACATTTGA+AGG + chr3_2:88361524-88361543 None:intergenic 45.0%
GCATGCATGGAGTAATTCTG+TGG - chr3_2:88361540-88361559 Msa0435220:intron 45.0%
AAGAGAACCAGAAGAGATCG+GGG - chr3_2:88361634-88361653 Msa0435220:intron 45.0%
TCAAGAGACTGATCAACCTG+CGG - chr3_2:88361723-88361742 Msa0435220:intron 45.0%
!! AAAAAAAAAAGAAAAAAAAA+AGG - chr3_2:88358102-88358121 Msa0435220:intron 5.0%
!! AAAAAAATTATTAATTACTT+GGG + chr3_2:88359953-88359972 None:intergenic 5.0%
!! AAAAAAAATTATTAATTACT+TGG + chr3_2:88359954-88359973 None:intergenic 5.0%
CGAACATAGGGAGTAGGTGA+AGG - chr3_2:88357401-88357420 Msa0435220:three_prime_UTR 50.0%
GGATCGTCTTCAGGAAGAAG+AGG + chr3_2:88357620-88357639 None:intergenic 50.0%
AGATGAGCAGGATCGTCTTC+AGG + chr3_2:88357629-88357648 None:intergenic 50.0%
AGACGATCCTGCTCATCTTC+AGG - chr3_2:88357631-88357650 Msa0435220:three_prime_UTR 50.0%
! CTAGAGAGGAGCACACTTCT+AGG + chr3_2:88357948-88357967 None:intergenic 50.0%
! CTAGAAGTGTGCTCCTCTCT+AGG - chr3_2:88357946-88357965 Msa0435220:CDS 50.0%
GGTCTCAGTTTGAATCCTCC+AGG - chr3_2:88357967-88357986 Msa0435220:CDS 50.0%
!! ACACAAGAACTGTTGGCTCC+TGG + chr3_2:88357988-88358007 None:intergenic 50.0%
GGAGCCAACAGTTCTTGTGT+TGG - chr3_2:88357988-88358007 Msa0435220:intron 50.0%
CAATTCCACCGTCCCAATTG+AGG + chr3_2:88358040-88358059 None:intergenic 50.0%
CTCAATTGGGACGGTGGAAT+TGG - chr3_2:88358038-88358057 Msa0435220:intron 50.0%
GTTTGGCTGGCGTATATTCG+AGG + chr3_2:88358223-88358242 None:intergenic 50.0%
AAATCCAAATGAGCGGCCGA+AGG + chr3_2:88358375-88358394 None:intergenic 50.0%
GGAGTCATCGCGACACAAAA+CGG + chr3_2:88358404-88358423 None:intergenic 50.0%
GCTGTGTGCACAAAGTTCAG+GGG + chr3_2:88358578-88358597 None:intergenic 50.0%
GGCTGTGTGCACAAAGTTCA+GGG + chr3_2:88358579-88358598 None:intergenic 50.0%
TGGCTGTGTGCACAAAGTTC+AGG + chr3_2:88358580-88358599 None:intergenic 50.0%
! AAATGGCACATGGTGGTGAC+TGG + chr3_2:88358843-88358862 None:intergenic 50.0%
!!! ACCACCATGTGCCATTTTCC+AGG - chr3_2:88358846-88358865 Msa0435220:CDS 50.0%
TCCTGGAAAATGGCACATGG+TGG + chr3_2:88358850-88358869 None:intergenic 50.0%
AAGGTCAAAAATTCGGGGGG+GGG + chr3_2:88360543-88360562 None:intergenic 50.0%
GGTGACAAGGTTGCAATGGA+AGG - chr3_2:88360969-88360988 Msa0435220:intron 50.0%
ATGGAAAATTGTGCCGGGAG+AGG - chr3_2:88361045-88361064 Msa0435220:intron 50.0%
AAGCCAACCATTCCAGGCAT+TGG + chr3_2:88361243-88361262 None:intergenic 50.0%
AATGTGCGTGTGTGCATGCA+TGG - chr3_2:88361527-88361546 Msa0435220:intron 50.0%
AGTTGCTTCAAGGCCCAGTT+AGG + chr3_2:88361700-88361719 None:intergenic 50.0%
AGTTACGGTGGAAGTAGCGG+TGG - chr3_2:88357467-88357486 Msa0435220:three_prime_UTR 55.0%
CGAAGGCAGAGAGATCTGTG+TGG - chr3_2:88357507-88357526 Msa0435220:three_prime_UTR 55.0%
!! CAAGAACTGTTGGCTCCTGG+AGG + chr3_2:88357985-88358004 None:intergenic 55.0%
CTATGCCTCAATTGGGACGG+TGG - chr3_2:88358032-88358051 Msa0435220:intron 55.0%
CGGCTGAACATTGCAGCCTT+CGG - chr3_2:88358356-88358375 Msa0435220:intron 55.0%
AGGTCAAAAATTCGGGGGGG+GGG + chr3_2:88360542-88360561 None:intergenic 55.0%
! AACTTGTGCCCTAAGGGCAC+AGG + chr3_2:88360831-88360850 None:intergenic 55.0%
ATGACCGTGGAACGCACATG+AGG - chr3_2:88361217-88361236 Msa0435220:intron 55.0%
TTGGCCTCATGTGCGTTCCA+CGG + chr3_2:88361224-88361243 None:intergenic 55.0%
CATGAGGCCAATGCCTGGAA+TGG - chr3_2:88361233-88361252 Msa0435220:intron 55.0%
AGGCCAATGCCTGGAATGGT+TGG - chr3_2:88361237-88361256 Msa0435220:intron 55.0%
TGTGAAACTTCCACACCGCC+AGG + chr3_2:88361347-88361366 None:intergenic 55.0%
TCAAAAATTCGGGGGGGGGG+GGG + chr3_2:88360539-88360558 None:intergenic 60.0%
GTCAAAAATTCGGGGGGGGG+GGG + chr3_2:88360540-88360559 None:intergenic 60.0%
GGTCAAAAATTCGGGGGGGG+GGG + chr3_2:88360541-88360560 None:intergenic 60.0%
ACGCACATGAGGCCAATGCC+TGG - chr3_2:88361228-88361247 Msa0435220:intron 60.0%
CAGCTCTCCCCGATCTCTTC+TGG + chr3_2:88361644-88361663 None:intergenic 60.0%
CAGAAGAGATCGGGGAGAGC+TGG - chr3_2:88361642-88361661 Msa0435220:intron 60.0%
AAGAGATCGGGGAGAGCTGG+AGG - chr3_2:88361645-88361664 Msa0435220:intron 60.0%
GCAGCCTTCGGCCGCTCATT+TGG - chr3_2:88358368-88358387 Msa0435220:intron 65.0%
AAAAATTCGGGGGGGGGGGG+GGG + chr3_2:88360537-88360556 None:intergenic 65.0%
CAAAAATTCGGGGGGGGGGG+GGG + chr3_2:88360538-88360557 None:intergenic 65.0%
AAAATTCGGGGGGGGGGGGG+GGG + chr3_2:88360536-88360555 None:intergenic 70.0%
AAATTCGGGGGGGGGGGGGG+GGG + chr3_2:88360535-88360554 None:intergenic 75.0%
! AATTCGGGGGGGGGGGGGGG+GGG + chr3_2:88360534-88360553 None:intergenic 80.0%
! ATTCGGGGGGGGGGGGGGGG+GGG + chr3_2:88360533-88360552 None:intergenic 85.0%
! TTCGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360532-88360551 None:intergenic 90.0%
! TCGGGGGGGGGGGGGGGGGG+GGG + chr3_2:88360531-88360550 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 88357339 88362535 88357339 ID=Msa0435220;Name=Msa0435220
chr3_2 mRNA 88357339 88362535 88357339 ID=Msa0435220-mRNA-1;Parent=Msa0435220;Name=Msa0435220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=113|1|1|1|1|1|6|538|262
chr3_2 exon 88357339 88357996 88357339 ID=Msa0435220-mRNA-1:exon:25951;Parent=Msa0435220-mRNA-1
chr3_2 exon 88358130 88358279 88358130 ID=Msa0435220-mRNA-1:exon:25950;Parent=Msa0435220-mRNA-1
chr3_2 exon 88358593 88358667 88358593 ID=Msa0435220-mRNA-1:exon:25949;Parent=Msa0435220-mRNA-1
chr3_2 exon 88358771 88358904 88358771 ID=Msa0435220-mRNA-1:exon:25948;Parent=Msa0435220-mRNA-1
chr3_2 exon 88360667 88360775 88360667 ID=Msa0435220-mRNA-1:exon:25947;Parent=Msa0435220-mRNA-1
chr3_2 exon 88362222 88362535 88362222 ID=Msa0435220-mRNA-1:exon:25946;Parent=Msa0435220-mRNA-1
chr3_2 five_prime_UTR 88362423 88362535 88362423 ID=Msa0435220-mRNA-1:five_prime_utr;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88362222 88362422 88362222 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88360667 88360775 88360667 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88358771 88358904 88358771 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88358593 88358667 88358593 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88358130 88358279 88358130 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 CDS 88357877 88357996 88357877 ID=Msa0435220-mRNA-1:cds;Parent=Msa0435220-mRNA-1
chr3_2 three_prime_UTR 88357339 88357876 88357339 ID=Msa0435220-mRNA-1:three_prime_utr;Parent=Msa0435220-mRNA-1
Gene Sequence

>Msa0435220

ATGGAAGATGAAAACAGTTACGGTGGAAGTAGCGGTGGTTCAAACTTGGAGACATCGAAGGCAGAGAGATCTGTGTGGCTTATGAAGTGTCCTGTTGCTGTTGCTAAATCATGGCAGAATCATCCACCTTCCCAACCTCTTTCTAAAGTCGTTTTTTCCATTGATCCTCTTCTTCCTGAAGACGATCCTGCTCATCTTCAGTTTACAATGGAGATGTCGGGCACTGAAGCTGTGAATATGCCAAAAACGTATTCTTTGAATATGTTTAAAGACTTCGTTCCTATGTGCATCTTCTCTGAGACAAGCGAAGGTGACAAGGTTGCAATGGAAGGGAAAGTAGAGCATAAGTTTGATATGAAGCCACGTCATGAAAACATGGATGATTATGGAAAATTGTGCCGGGAGAGGACAAAGAAATCTATGATTAAAAATCGTCAAGTACAGATTATTGCTGATGACCGTGGAACGCACATGAGGCCAATGCCTGGAATGGTTGGCTTAGTTTCATCCAATTTTAAGGATAAGAAGAGGACACAGCCAGTCAAACAAACTGATACAAAGAGAACCAGAAGAGATCGGGGAGAGCTGGAGGATATAATGTTCAAACTATTTGAAAGACAGCCTAACTGGGCCTTGAAGCAACTTGTTCAAGAGACTGATCAACCTGCGCAATTCTTGAAAGAGATCTTGAATGAATTGTGTGTATACAATAAAAGAGGCGCCAATCAAGGAACTTATGAGCTGAAACCTGAATACAAGAAATCTGTCGAAGATGCAAACGCTGAATAA

Protein sequence

>Msa0435220

MEDENSYGGSSGGSNLETSKAERSVWLMKCPVAVAKSWQNHPPSQPLSKVVFSIDPLLPEDDPAHLQFTMEMSGTEAVNMPKTYSLNMFKDFVPMCIFSETSEGDKVAMEGKVEHKFDMKPRHENMDDYGKLCRERTKKSMIKNRQVQIIADDRGTHMRPMPGMVGLVSSNFKDKKRTQPVKQTDTKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVEDANAE*