Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602120 | XP_003606419.2 | 97.189 | 498 | 11 | 2 | 1 | 498 | 1 | 495 | 0.0 | 1004 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602120 | sp|Q944L3|IDD9_ARATH | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 2.24e-109 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602120 | G7JPG1 | 97.189 | 498 | 11 | 2 | 1 | 498 | 1 | 495 | 0.0 | 1004 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0602120 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0602120 | -0.871460 | 6.722621e-67 | -8.615850e-47 |
| Msa0004860 | Msa0602120 | 0.829053 | 6.383577e-55 | -8.615850e-47 |
| Msa0004920 | Msa0602120 | 0.822943 | 1.807382e-53 | -8.615850e-47 |
| Msa0015140 | Msa0602120 | 0.813862 | 2.064448e-51 | -8.615850e-47 |
| Msa0015680 | Msa0602120 | 0.810762 | 9.810456e-51 | -8.615850e-47 |
| Msa0027390 | Msa0602120 | 0.825840 | 3.763656e-54 | -8.615850e-47 |
| Msa0027580 | Msa0602120 | 0.805934 | 1.050437e-49 | -8.615850e-47 |
| Msa0041970 | Msa0602120 | 0.805911 | 1.062132e-49 | -8.615850e-47 |
| Msa0043170 | Msa0602120 | 0.805766 | 1.139385e-49 | -8.615850e-47 |
| Msa0051770 | Msa0602120 | 0.818829 | 1.597658e-52 | -8.615850e-47 |
| Msa0057140 | Msa0602120 | 0.809550 | 1.790420e-50 | -8.615850e-47 |
| Msa0075340 | Msa0602120 | 0.805531 | 1.276314e-49 | -8.615850e-47 |
| Msa0085360 | Msa0602120 | -0.842711 | 2.188352e-58 | -8.615850e-47 |
| Msa0099510 | Msa0602120 | 0.812677 | 3.759574e-51 | -8.615850e-47 |
| Msa0104610 | Msa0602120 | 0.819659 | 1.034267e-52 | -8.615850e-47 |
| Msa0105420 | Msa0602120 | 0.808937 | 2.422386e-50 | -8.615850e-47 |
| Msa0108870 | Msa0602120 | 0.819612 | 1.060144e-52 | -8.615850e-47 |
| Msa0114540 | Msa0602120 | -0.800154 | 1.646585e-48 | -8.615850e-47 |
| Msa0122810 | Msa0602120 | 0.802182 | 6.335169e-49 | -8.615850e-47 |
| Msa0128650 | Msa0602120 | 0.808132 | 3.599309e-50 | -8.615850e-47 |
| Msa0137040 | Msa0602120 | 0.809334 | 1.992111e-50 | -8.615850e-47 |
| Msa0148120 | Msa0602120 | 0.801529 | 8.626365e-49 | -8.615850e-47 |
| Msa0165300 | Msa0602120 | 0.830169 | 3.416467e-55 | -8.615850e-47 |
| Msa0165970 | Msa0602120 | 0.818161 | 2.265092e-52 | -8.615850e-47 |
| Msa0173990 | Msa0602120 | 0.803259 | 3.796254e-49 | -8.615850e-47 |
| Msa0177230 | Msa0602120 | 0.823754 | 1.167970e-53 | -8.615850e-47 |
| Msa0177270 | Msa0602120 | 0.820128 | 8.080317e-53 | -8.615850e-47 |
| Msa0177700 | Msa0602120 | -0.843998 | 9.922269e-59 | -8.615850e-47 |
| Msa0182280 | Msa0602120 | 0.802608 | 5.176330e-49 | -8.615850e-47 |
| Msa0183590 | Msa0602120 | 0.807365 | 5.239216e-50 | -8.615850e-47 |
| Msa0185590 | Msa0602120 | 0.805723 | 1.163042e-49 | -8.615850e-47 |
| Msa0188630 | Msa0602120 | 0.829196 | 5.893986e-55 | -8.615850e-47 |
| Msa0188680 | Msa0602120 | -0.834821 | 2.401651e-56 | -8.615850e-47 |
| Msa0191250 | Msa0602120 | 0.819423 | 1.170829e-52 | -8.615850e-47 |
| Msa0194020 | Msa0602120 | 0.811067 | 8.427400e-51 | -8.615850e-47 |
| Msa0198520 | Msa0602120 | 0.811094 | 8.311880e-51 | -8.615850e-47 |
| Msa0198530 | Msa0602120 | 0.811873 | 5.631630e-51 | -8.615850e-47 |
| Msa0205850 | Msa0602120 | 0.817548 | 3.114245e-52 | -8.615850e-47 |
| Msa0208810 | Msa0602120 | 0.802948 | 4.403241e-49 | -8.615850e-47 |
| Msa0223100 | Msa0602120 | 0.805701 | 1.175364e-49 | -8.615850e-47 |
| Msa0223290 | Msa0602120 | 0.826159 | 3.161029e-54 | -8.615850e-47 |
| Msa0223380 | Msa0602120 | 0.815734 | 7.943596e-52 | -8.615850e-47 |
| Msa0227400 | Msa0602120 | 0.827977 | 1.160816e-54 | -8.615850e-47 |
| Msa0232320 | Msa0602120 | 0.800134 | 1.661551e-48 | -8.615850e-47 |
| Msa0235890 | Msa0602120 | 0.808697 | 2.727352e-50 | -8.615850e-47 |
| Msa0236440 | Msa0602120 | 0.821237 | 4.491960e-53 | -8.615850e-47 |
| Msa0372660 | Msa0602120 | 0.803117 | 4.063158e-49 | -8.615850e-47 |
| Msa0372670 | Msa0602120 | 0.805353 | 1.390803e-49 | -8.615850e-47 |
| Msa0377530 | Msa0602120 | 0.837874 | 4.017645e-57 | -8.615850e-47 |
| Msa0380040 | Msa0602120 | 0.805649 | 1.205486e-49 | -8.615850e-47 |
| Msa0388030 | Msa0602120 | -0.803276 | 3.766725e-49 | -8.615850e-47 |
| Msa0393680 | Msa0602120 | 0.803796 | 2.937739e-49 | -8.615850e-47 |
| Msa0393710 | Msa0602120 | 0.832349 | 9.947151e-56 | -8.615850e-47 |
| Msa0393950 | Msa0602120 | 0.814421 | 1.553992e-51 | -8.615850e-47 |
| Msa0395870 | Msa0602120 | 0.808395 | 3.163441e-50 | -8.615850e-47 |
| Msa0402330 | Msa0602120 | 0.800841 | 1.192633e-48 | -8.615850e-47 |
| Msa0404700 | Msa0602120 | 0.820997 | 5.103522e-53 | -8.615850e-47 |
| Msa0413450 | Msa0602120 | 0.803851 | 2.861671e-49 | -8.615850e-47 |
| Msa0414950 | Msa0602120 | -0.802282 | 6.040874e-49 | -8.615850e-47 |
| Msa0415810 | Msa0602120 | 0.806704 | 7.227497e-50 | -8.615850e-47 |
| Msa0419640 | Msa0602120 | -0.802694 | 4.968776e-49 | -8.615850e-47 |
| Msa0421780 | Msa0602120 | -0.802400 | 5.711696e-49 | -8.615850e-47 |
| Msa0423360 | Msa0602120 | -0.806297 | 8.808132e-50 | -8.615850e-47 |
| Msa0424920 | Msa0602120 | 0.804761 | 1.849745e-49 | -8.615850e-47 |
| Msa0426330 | Msa0602120 | 0.828183 | 1.035793e-54 | -8.615850e-47 |
| Msa0426810 | Msa0602120 | 0.818304 | 2.101801e-52 | -8.615850e-47 |
| Msa0429290 | Msa0602120 | 0.802029 | 6.809504e-49 | -8.615850e-47 |
| Msa0430820 | Msa0602120 | 0.810357 | 1.200220e-50 | -8.615850e-47 |
| Msa0445280 | Msa0602120 | 0.817190 | 3.749354e-52 | -8.615850e-47 |
| Msa0460930 | Msa0602120 | 0.804125 | 2.510522e-49 | -8.615850e-47 |
| Msa0462540 | Msa0602120 | 0.802563 | 5.288089e-49 | -8.615850e-47 |
| Msa0464900 | Msa0602120 | 0.865326 | 6.402693e-65 | -8.615850e-47 |
| Msa0465480 | Msa0602120 | -0.803896 | 2.801272e-49 | -8.615850e-47 |
| Msa0467900 | Msa0602120 | -0.806859 | 6.704381e-50 | -8.615850e-47 |
| Msa0467960 | Msa0602120 | -0.822605 | 2.166061e-53 | -8.615850e-47 |
| Msa0469910 | Msa0602120 | -0.837603 | 4.714684e-57 | -8.615850e-47 |
| Msa0473240 | Msa0602120 | 0.804727 | 1.879723e-49 | -8.615850e-47 |
| Msa0475580 | Msa0602120 | 0.800036 | 1.740240e-48 | -8.615850e-47 |
| Msa0480320 | Msa0602120 | 0.806926 | 6.488144e-50 | -8.615850e-47 |
| Msa0239510 | Msa0602120 | 0.826728 | 2.313283e-54 | -8.615850e-47 |
| Msa0239940 | Msa0602120 | 0.816261 | 6.057624e-52 | -8.615850e-47 |
| Msa0242680 | Msa0602120 | 0.814390 | 1.579130e-51 | -8.615850e-47 |
| Msa0245850 | Msa0602120 | 0.824051 | 9.951497e-54 | -8.615850e-47 |
| Msa0248980 | Msa0602120 | 0.827968 | 1.166676e-54 | -8.615850e-47 |
| Msa0250670 | Msa0602120 | 0.811369 | 7.245578e-51 | -8.615850e-47 |
| Msa0251250 | Msa0602120 | 0.800258 | 1.568205e-48 | -8.615850e-47 |
| Msa0252240 | Msa0602120 | 0.802671 | 5.021516e-49 | -8.615850e-47 |
| Msa0259270 | Msa0602120 | 0.804648 | 1.953317e-49 | -8.615850e-47 |
| Msa0259560 | Msa0602120 | 0.812869 | 3.412805e-51 | -8.615850e-47 |
| Msa0260810 | Msa0602120 | 0.804248 | 2.366732e-49 | -8.615850e-47 |
| Msa0264930 | Msa0602120 | 0.809565 | 1.776971e-50 | -8.615850e-47 |
| Msa0266210 | Msa0602120 | 0.840282 | 9.551021e-58 | -8.615850e-47 |
| Msa0267870 | Msa0602120 | 0.812564 | 3.979698e-51 | -8.615850e-47 |
| Msa0270220 | Msa0602120 | -0.819274 | 1.265987e-52 | -8.615850e-47 |
| Msa0270270 | Msa0602120 | 0.803786 | 2.951571e-49 | -8.615850e-47 |
| Msa0271810 | Msa0602120 | 0.815749 | 7.881677e-52 | -8.615850e-47 |
| Msa0275400 | Msa0602120 | -0.838883 | 2.207169e-57 | -8.615850e-47 |
| Msa0276920 | Msa0602120 | 0.820809 | 5.638315e-53 | -8.615850e-47 |
| Msa0287310 | Msa0602120 | 0.811377 | 7.218017e-51 | -8.615850e-47 |
| Msa0287670 | Msa0602120 | 0.834796 | 2.435747e-56 | -8.615850e-47 |
| Msa0288730 | Msa0602120 | 0.812429 | 4.258803e-51 | -8.615850e-47 |
| Msa0289400 | Msa0602120 | 0.821490 | 3.928298e-53 | -8.615850e-47 |
| Msa0291520 | Msa0602120 | 0.800868 | 1.177764e-48 | -8.615850e-47 |
| Msa0294150 | Msa0602120 | 0.824190 | 9.231427e-54 | -8.615850e-47 |
| Msa0299730 | Msa0602120 | 0.810406 | 1.171024e-50 | -8.615850e-47 |
| Msa0302650 | Msa0602120 | 0.838396 | 2.948463e-57 | -8.615850e-47 |
| Msa0302980 | Msa0602120 | 0.813549 | 2.420152e-51 | -8.615850e-47 |
| Msa0304700 | Msa0602120 | 0.801099 | 1.056495e-48 | -8.615850e-47 |
| Msa0307830 | Msa0602120 | -0.822573 | 2.203217e-53 | -8.615850e-47 |
| Msa0308220 | Msa0602120 | 0.814639 | 1.390980e-51 | -8.615850e-47 |
| Msa0308550 | Msa0602120 | 0.819025 | 1.441975e-52 | -8.615850e-47 |
| Msa0310410 | Msa0602120 | 0.813049 | 3.115780e-51 | -8.615850e-47 |
| Msa0311860 | Msa0602120 | 0.848121 | 7.497553e-60 | -8.615850e-47 |
| Msa0317390 | Msa0602120 | 0.802880 | 4.547843e-49 | -8.615850e-47 |
| Msa0320610 | Msa0602120 | 0.808230 | 3.430648e-50 | -8.615850e-47 |
| Msa0321170 | Msa0602120 | 0.815726 | 7.973684e-52 | -8.615850e-47 |
| Msa0321190 | Msa0602120 | 0.819664 | 1.031367e-52 | -8.615850e-47 |
| Msa0325850 | Msa0602120 | 0.805606 | 1.230918e-49 | -8.615850e-47 |
| Msa0327410 | Msa0602120 | 0.828362 | 9.376564e-55 | -8.615850e-47 |
| Msa0328210 | Msa0602120 | 0.813814 | 2.116050e-51 | -8.615850e-47 |
| Msa0334350 | Msa0602120 | 0.839955 | 1.162732e-57 | -8.615850e-47 |
| Msa0335040 | Msa0602120 | 0.832329 | 1.005654e-55 | -8.615850e-47 |
| Msa0344870 | Msa0602120 | 0.808807 | 2.583689e-50 | -8.615850e-47 |
| Msa0355270 | Msa0602120 | 0.800604 | 1.333483e-48 | -8.615850e-47 |
| Msa0356890 | Msa0602120 | -0.823346 | 1.455452e-53 | -8.615850e-47 |
| Msa0363170 | Msa0602120 | 0.814297 | 1.655417e-51 | -8.615850e-47 |
| Msa0484780 | Msa0602120 | 0.822633 | 2.133453e-53 | -8.615850e-47 |
| Msa0489030 | Msa0602120 | 0.808919 | 2.444948e-50 | -8.615850e-47 |
| Msa0493920 | Msa0602120 | 0.814609 | 1.412033e-51 | -8.615850e-47 |
| Msa0505060 | Msa0602120 | 0.827748 | 1.318392e-54 | -8.615850e-47 |
| Msa0505770 | Msa0602120 | 0.804435 | 2.162858e-49 | -8.615850e-47 |
| Msa0506890 | Msa0602120 | 0.801698 | 7.963588e-49 | -8.615850e-47 |
| Msa0516320 | Msa0602120 | 0.802603 | 5.186332e-49 | -8.615850e-47 |
| Msa0517490 | Msa0602120 | 0.836698 | 8.036030e-57 | -8.615850e-47 |
| Msa0519220 | Msa0602120 | 0.808813 | 2.575620e-50 | -8.615850e-47 |
| Msa0521880 | Msa0602120 | 0.811823 | 5.772955e-51 | -8.615850e-47 |
| Msa0526890 | Msa0602120 | 0.832293 | 1.026501e-55 | -8.615850e-47 |
| Msa0535030 | Msa0602120 | 0.807503 | 4.895988e-50 | -8.615850e-47 |
| Msa0535060 | Msa0602120 | 0.806231 | 9.094713e-50 | -8.615850e-47 |
| Msa0536790 | Msa0602120 | 0.802285 | 6.033644e-49 | -8.615850e-47 |
| Msa0542160 | Msa0602120 | 0.810286 | 1.243391e-50 | -8.615850e-47 |
| Msa0545060 | Msa0602120 | 0.813011 | 3.175592e-51 | -8.615850e-47 |
| Msa0547400 | Msa0602120 | 0.958308 | 3.247438e-116 | -8.615850e-47 |
| Msa0568820 | Msa0602120 | 0.804776 | 1.836044e-49 | -8.615850e-47 |
| Msa0571700 | Msa0602120 | 0.804794 | 1.820770e-49 | -8.615850e-47 |
| Msa0577220 | Msa0602120 | 0.810462 | 1.138855e-50 | -8.615850e-47 |
| Msa0578090 | Msa0602120 | 0.809494 | 1.840294e-50 | -8.615850e-47 |
| Msa0586850 | Msa0602120 | 0.811051 | 8.494153e-51 | -8.615850e-47 |
| Msa0590680 | Msa0602120 | 0.802683 | 4.994305e-49 | -8.615850e-47 |
| Msa0591770 | Msa0602120 | 0.811443 | 6.982577e-51 | -8.615850e-47 |
| Msa0602120 | Msa0609970 | 0.801340 | 9.427692e-49 | -8.615850e-47 |
| Msa0602120 | Msa0610500 | 0.808465 | 3.056681e-50 | -8.615850e-47 |
| Msa0602120 | Msa0619070 | 0.813131 | 2.989859e-51 | -8.615850e-47 |
| Msa0602120 | Msa0626220 | 0.802855 | 4.601492e-49 | -8.615850e-47 |
| Msa0602120 | Msa0626680 | 0.821463 | 3.984296e-53 | -8.615850e-47 |
| Msa0602120 | Msa0638280 | 0.854814 | 9.580388e-62 | -8.615850e-47 |
| Msa0602120 | Msa0638320 | 0.852062 | 5.906182e-61 | -8.615850e-47 |
| Msa0602120 | Msa0643250 | 0.948923 | 3.588550e-107 | -8.615850e-47 |
| Msa0602120 | Msa0651150 | 0.818258 | 2.152519e-52 | -8.615850e-47 |
| Msa0602120 | Msa0652300 | 0.809692 | 1.668704e-50 | -8.615850e-47 |
| Msa0602120 | Msa0664760 | 0.811679 | 6.206009e-51 | -8.615850e-47 |
| Msa0602120 | Msa0669850 | 0.819782 | 9.695506e-53 | -8.615850e-47 |
| Msa0602120 | Msa0677080 | 0.807480 | 4.951946e-50 | -8.615850e-47 |
| Msa0602120 | Msa0677270 | 0.858655 | 7.097996e-63 | -8.615850e-47 |
| Msa0602120 | Msa0679550 | 0.819826 | 9.471182e-53 | -8.615850e-47 |
| Msa0602120 | Msa0682950 | 0.936924 | 7.958217e-98 | -8.615850e-47 |
| Msa0602120 | Msa0693380 | 0.825269 | 5.140303e-54 | -8.615850e-47 |
| Msa0602120 | Msa0694840 | 0.803000 | 4.295416e-49 | -8.615850e-47 |
| Msa0602120 | Msa0711490 | 0.805013 | 1.638840e-49 | -8.615850e-47 |
| Msa0602120 | Msa0715110 | 0.822137 | 2.782527e-53 | -8.615850e-47 |
| Msa0602120 | Msa0724830 | 0.805007 | 1.642940e-49 | -8.615850e-47 |
| Msa0602120 | Msa0726860 | 0.802369 | 5.795623e-49 | -8.615850e-47 |
| Msa0602120 | Msa0735310 | 0.814019 | 1.906805e-51 | -8.615850e-47 |
| Msa0602120 | Msa0737560 | 0.802155 | 6.414987e-49 | -8.615850e-47 |
| Msa0602120 | Msa0739120 | 0.844166 | 8.945837e-59 | -8.615850e-47 |
| Msa0602120 | Msa0743680 | 0.806321 | 8.706640e-50 | -8.615850e-47 |
| Msa0602120 | Msa0744090 | 0.826581 | 2.508152e-54 | -8.615850e-47 |
| Msa0602120 | Msa0754720 | -0.847283 | 1.275723e-59 | -8.615850e-47 |
| Msa0602120 | Msa0756630 | -0.826688 | 2.365318e-54 | -8.615850e-47 |
| Msa0602120 | Msa0757080 | 0.803319 | 3.689265e-49 | -8.615850e-47 |
| Msa0602120 | Msa0770350 | 0.821272 | 4.409069e-53 | -8.615850e-47 |
| Msa0602120 | Msa0778320 | 0.816814 | 4.554886e-52 | -8.615850e-47 |
| Msa0602120 | Msa0784620 | 0.803287 | 3.745793e-49 | -8.615850e-47 |
| Msa0602120 | Msa0788710 | 0.845686 | 3.479736e-59 | -8.615850e-47 |
| Msa0602120 | Msa0790390 | -0.840119 | 1.053407e-57 | -8.615850e-47 |
| Msa0602120 | Msa0814320 | 0.835677 | 1.459588e-56 | -8.615850e-47 |
| Msa0602120 | Msa0817270 | 0.800159 | 1.642671e-48 | -8.615850e-47 |
| Msa0602120 | Msa0824730 | 0.820934 | 5.274863e-53 | -8.615850e-47 |
| Msa0602120 | Msa0825280 | 0.826991 | 2.001437e-54 | -8.615850e-47 |
| Msa0602120 | Msa0826190 | 0.805732 | 1.158302e-49 | -8.615850e-47 |
| Msa0602120 | Msa0829620 | 0.831066 | 2.060132e-55 | -8.615850e-47 |
| Msa0602120 | Msa0849330 | 0.801553 | 8.528692e-49 | -8.615850e-47 |
| Msa0602120 | Msa0851470 | 0.821300 | 4.344099e-53 | -8.615850e-47 |
| Msa0602120 | Msa0863370 | 0.805372 | 1.378028e-49 | -8.615850e-47 |
| Msa0602120 | Msa0863800 | 0.809522 | 1.815326e-50 | -8.615850e-47 |
| Msa0602120 | Msa0863870 | 0.807528 | 4.836918e-50 | -8.615850e-47 |
| Msa0602120 | Msa0866120 | 0.820064 | 8.354373e-53 | -8.615850e-47 |
| Msa0602120 | Msa0867890 | 0.808492 | 3.016487e-50 | -8.615850e-47 |
| Msa0602120 | Msa0881020 | 0.836298 | 1.015498e-56 | -8.615850e-47 |
| Msa0602120 | Msa0881030 | 0.843182 | 1.639349e-58 | -8.615850e-47 |
| Msa0602120 | Msa0881580 | 0.803688 | 3.094015e-49 | -8.615850e-47 |
| Msa0602120 | Msa0891600 | -0.805714 | 1.168308e-49 | -8.615850e-47 |
| Msa0602120 | Msa0893810 | 0.806716 | 7.186369e-50 | -8.615850e-47 |
| Msa0602120 | Msa0896290 | 0.812773 | 3.581045e-51 | -8.615850e-47 |
| Msa0602120 | Msa0899350 | 0.812798 | 3.536629e-51 | -8.615850e-47 |
| Msa0602120 | Msa0908170 | 0.846165 | 2.577790e-59 | -8.615850e-47 |
| Msa0602120 | Msa0909000 | -0.839831 | 1.252521e-57 | -8.615850e-47 |
| Msa0602120 | Msa0910980 | -0.805544 | 1.268505e-49 | -8.615850e-47 |
| Msa0602120 | Msa0942730 | 0.803351 | 3.633120e-49 | -8.615850e-47 |
| Msa0602120 | Msa0945840 | 0.805438 | 1.334559e-49 | -8.615850e-47 |
| Msa0602120 | Msa0946080 | 0.809175 | 2.154129e-50 | -8.615850e-47 |
| Msa0602120 | Msa0959010 | 0.823333 | 1.465435e-53 | -8.615850e-47 |
| Msa0602120 | Msa0965020 | 0.803048 | 4.197679e-49 | -8.615850e-47 |
| Msa0602120 | Msa0967370 | 0.801307 | 9.575670e-49 | -8.615850e-47 |
| Msa0602120 | Msa0976330 | 0.800242 | 1.580158e-48 | -8.615850e-47 |
| Msa0602120 | Msa0993530 | 0.841393 | 4.881768e-58 | -8.615850e-47 |
| Msa0602120 | Msa1026760 | 0.814109 | 1.821558e-51 | -8.615850e-47 |
| Msa0602120 | Msa1026790 | 0.812883 | 3.388829e-51 | -8.615850e-47 |
| Msa0602120 | Msa1037700 | -0.855370 | 6.602989e-62 | -8.615850e-47 |
| Msa0602120 | Msa1040800 | 0.804635 | 1.965037e-49 | -8.615850e-47 |
| Msa0602120 | Msa1040890 | 0.839700 | 1.354729e-57 | -8.615850e-47 |
| Msa0602120 | Msa1041520 | 0.811473 | 6.881071e-51 | -8.615850e-47 |
| Msa0602120 | Msa1050420 | 0.808664 | 2.771968e-50 | -8.615850e-47 |
| Msa0602120 | Msa1056460 | 0.809322 | 2.003401e-50 | -8.615850e-47 |
| Msa0602120 | Msa1082500 | 0.817316 | 3.512076e-52 | -8.615850e-47 |
| Msa0602120 | Msa1083210 | 0.818115 | 2.319701e-52 | -8.615850e-47 |
| Msa0602120 | Msa1100720 | 0.815047 | 1.129044e-51 | -8.615850e-47 |
| Msa0602120 | Msa1111700 | 0.800650 | 1.304411e-48 | -8.615850e-47 |
| Msa0602120 | Msa1125470 | 0.804198 | 2.423287e-49 | -8.615850e-47 |
| Msa0602120 | Msa1125550 | 0.810876 | 9.266246e-51 | -8.615850e-47 |
| Msa0602120 | Msa1127830 | 0.831620 | 1.505514e-55 | -8.615850e-47 |
| Msa0602120 | Msa1130210 | -0.883039 | 6.287469e-71 | -8.615850e-47 |
| Msa0602120 | Msa1171870 | 0.819124 | 1.369204e-52 | -8.615850e-47 |
| Msa0602120 | Msa1193950 | -0.822944 | 1.806252e-53 | -8.615850e-47 |
| Msa0602120 | Msa1199560 | 0.802464 | 5.542109e-49 | -8.615850e-47 |
| Msa0602120 | Msa1203250 | 0.810442 | 1.150491e-50 | -8.615850e-47 |
| Msa0602120 | Msa1206020 | 0.807608 | 4.650829e-50 | -8.615850e-47 |
| Msa0602120 | Msa1214880 | 0.827912 | 1.203376e-54 | -8.615850e-47 |
| Msa0602120 | Msa1214890 | 0.827037 | 1.951650e-54 | -8.615850e-47 |
| Msa0602120 | Msa1217660 | 0.818639 | 1.764962e-52 | -8.615850e-47 |
| Msa0602120 | Msa1217830 | 0.827896 | 1.214436e-54 | -8.615850e-47 |
| Msa0602120 | Msa1217860 | 0.826420 | 2.740442e-54 | -8.615850e-47 |
| Msa0602120 | Msa1219110 | 0.821943 | 3.085836e-53 | -8.615850e-47 |
| Msa0602120 | Msa1233500 | 0.813778 | 2.154743e-51 | -8.615850e-47 |
| Msa0602120 | Msa1246530 | -0.806601 | 7.600509e-50 | -8.615850e-47 |
| Msa0602120 | Msa1249920 | 0.850059 | 2.168214e-60 | -8.615850e-47 |
| Msa0602120 | Msa1253050 | 0.819016 | 1.448979e-52 | -8.615850e-47 |
| Msa0602120 | Msa1255040 | -0.807709 | 4.428125e-50 | -8.615850e-47 |
| Msa0602120 | Msa1280620 | 0.813089 | 3.052836e-51 | -8.615850e-47 |
| Msa0602120 | Msa1291350 | 0.843287 | 1.537669e-58 | -8.615850e-47 |
| Msa0602120 | Msa1300350 | -0.805757 | 1.144155e-49 | -8.615850e-47 |
| Msa0602120 | Msa1300860 | 0.854051 | 1.591934e-61 | -8.615850e-47 |
| Msa0602120 | Msa1306430 | 0.820771 | 5.752894e-53 | -8.615850e-47 |
| Msa0602120 | Msa1314100 | 0.828730 | 7.643127e-55 | -8.615850e-47 |
| Msa0602120 | Msa1328850 | 0.811664 | 6.251019e-51 | -8.615850e-47 |
| Msa0602120 | Msa1331910 | 0.841061 | 5.971900e-58 | -8.615850e-47 |
| Msa0602120 | Msa1331920 | 0.836995 | 6.748977e-57 | -8.615850e-47 |
| Msa0602120 | Msa1340260 | 0.827959 | 1.172572e-54 | -8.615850e-47 |
| Msa0602120 | Msa1341570 | 0.813318 | 2.719246e-51 | -8.615850e-47 |
| Msa0602120 | Msa1350690 | 0.834725 | 2.538281e-56 | -8.615850e-47 |
| Msa0602120 | Msa1362510 | 0.841894 | 3.601544e-58 | -8.615850e-47 |
| Msa0602120 | Msa1372310 | 0.807682 | 4.486298e-50 | -8.615850e-47 |
| Msa0602120 | Msa1386230 | 0.814787 | 1.289679e-51 | -8.615850e-47 |
| Msa0602120 | Msa1388450 | 0.812287 | 4.574654e-51 | -8.615850e-47 |
| Msa0602120 | Msa1390230 | 0.815288 | 9.984318e-52 | -8.615850e-47 |
| Msa0602120 | Msa1398860 | 0.808766 | 2.635926e-50 | -8.615850e-47 |
| Msa0602120 | Msa1402270 | 0.810495 | 1.120229e-50 | -8.615850e-47 |
| Msa0602120 | Msa1403580 | -0.824885 | 6.334773e-54 | -8.615850e-47 |
| Msa0602120 | Msa1403930 | -0.805279 | 1.441090e-49 | -8.615850e-47 |
| Msa0602120 | Msa1404540 | 0.810946 | 8.949815e-51 | -8.615850e-47 |
| Msa0602120 | Msa1408760 | -0.802316 | 5.943422e-49 | -8.615850e-47 |
| Msa0602120 | Msa1415940 | 0.835434 | 1.681536e-56 | -8.615850e-47 |
| Msa0602120 | Msa1422840 | 0.814168 | 1.767320e-51 | -8.615850e-47 |
| Msa0602120 | Msa1427830 | 0.804072 | 2.574949e-49 | -8.615850e-47 |
| Msa0602120 | Msa1431060 | 0.809907 | 1.500356e-50 | -8.615850e-47 |
| Msa0602120 | Msa1439960 | 0.832179 | 1.095608e-55 | -8.615850e-47 |
| Msa0602120 | Msa1442220 | -0.831755 | 1.394693e-55 | -8.615850e-47 |
| Msa0602120 | Msa1443290 | -0.820994 | 5.110521e-53 | -8.615850e-47 |
| Msa0602120 | Msa1452470 | 0.809081 | 2.256881e-50 | -8.615850e-47 |
| Msa0602120 | Msa1452480 | 0.816523 | 5.293338e-52 | -8.615850e-47 |
| Msa0602120 | Msa1454110 | 0.814430 | 1.547183e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602120 | MtrunA17_Chr4g0029521 | 97.189 | 498 | 11 | 2 | 1 | 498 | 1 | 495 | 0.0 | 1004 |
| Msa0602120 | MtrunA17_Chr2g0326381 | 56.825 | 359 | 110 | 13 | 38 | 371 | 31 | 369 | 2.82e-126 | 374 |
| Msa0602120 | MtrunA17_Chr1g0181381 | 52.308 | 390 | 141 | 10 | 1 | 355 | 3 | 382 | 1.37e-122 | 368 |
| Msa0602120 | MtrunA17_Chr7g0263941 | 76.847 | 203 | 41 | 5 | 24 | 223 | 18 | 217 | 6.74e-112 | 337 |
| Msa0602120 | MtrunA17_Chr8g0373541 | 69.545 | 220 | 60 | 3 | 9 | 226 | 7 | 221 | 1.23e-110 | 338 |
| Msa0602120 | MtrunA17_Chr2g0330171 | 43.451 | 481 | 189 | 15 | 36 | 496 | 43 | 460 | 3.04e-110 | 335 |
| Msa0602120 | MtrunA17_Chr4g0040571 | 43.750 | 496 | 168 | 16 | 34 | 461 | 34 | 486 | 1.69e-108 | 332 |
| Msa0602120 | MtrunA17_Chr8g0342421 | 77.000 | 200 | 43 | 2 | 8 | 205 | 29 | 227 | 2.00e-108 | 332 |
| Msa0602120 | MtrunA17_Chr1g0185121 | 54.459 | 314 | 118 | 6 | 35 | 345 | 36 | 327 | 5.61e-108 | 328 |
| Msa0602120 | MtrunA17_Chr1g0199101 | 40.143 | 558 | 218 | 19 | 18 | 497 | 13 | 532 | 1.74e-107 | 330 |
| Msa0602120 | MtrunA17_Chr1g0191991 | 77.717 | 184 | 38 | 2 | 37 | 220 | 61 | 241 | 3.59e-104 | 321 |
| Msa0602120 | MtrunA17_Chr1g0151351 | 77.095 | 179 | 41 | 0 | 39 | 217 | 41 | 219 | 1.49e-103 | 317 |
| Msa0602120 | MtrunA17_Chr1g0163001 | 74.194 | 186 | 45 | 2 | 36 | 219 | 40 | 224 | 3.66e-102 | 316 |
| Msa0602120 | MtrunA17_Chr1g0162971 | 80.488 | 164 | 31 | 1 | 39 | 202 | 41 | 203 | 1.18e-101 | 312 |
| Msa0602120 | MtrunA17_Chr1g0210821 | 75.141 | 177 | 41 | 2 | 42 | 218 | 47 | 220 | 1.63e-99 | 310 |
| Msa0602120 | MtrunA17_Chr3g0141431 | 76.543 | 162 | 38 | 0 | 35 | 196 | 18 | 179 | 7.65e-97 | 298 |
| Msa0602120 | MtrunA17_Chr7g0268961 | 81.935 | 155 | 27 | 1 | 49 | 203 | 32 | 185 | 1.72e-95 | 298 |
| Msa0602120 | MtrunA17_Chr2g0324991 | 86.364 | 132 | 17 | 1 | 50 | 181 | 3 | 133 | 4.96e-83 | 253 |
| Msa0602120 | MtrunA17_Chr6g0479921 | 61.783 | 157 | 58 | 2 | 39 | 194 | 29 | 184 | 4.45e-69 | 228 |
| Msa0602120 | MtrunA17_Chr8g0375521 | 60.256 | 156 | 61 | 1 | 39 | 193 | 27 | 182 | 5.41e-69 | 226 |
| Msa0602120 | MtrunA17_Chr2g0320341 | 34.839 | 155 | 88 | 4 | 48 | 189 | 224 | 378 | 1.10e-24 | 105 |
| Msa0602120 | MtrunA17_Chr1g0200421 | 34.868 | 152 | 86 | 4 | 53 | 192 | 236 | 386 | 1.91e-24 | 106 |
| Msa0602120 | MtrunA17_Chr3g0123941 | 35.897 | 156 | 93 | 4 | 44 | 192 | 113 | 268 | 5.36e-24 | 102 |
| Msa0602120 | MtrunA17_Chr5g0422571 | 34.682 | 173 | 102 | 6 | 32 | 195 | 79 | 249 | 1.03e-21 | 95.5 |
| Msa0602120 | MtrunA17_Chr8g0382121 | 33.987 | 153 | 91 | 4 | 47 | 189 | 104 | 256 | 5.73e-21 | 93.6 |
| Msa0602120 | MtrunA17_Chr7g0258011 | 33.540 | 161 | 90 | 5 | 62 | 206 | 183 | 342 | 4.29e-20 | 91.7 |
| Msa0602120 | MtrunA17_Chr4g0053341 | 34.211 | 152 | 89 | 5 | 50 | 192 | 69 | 218 | 7.45e-20 | 88.6 |
| Msa0602120 | MtrunA17_Chr1g0198651 | 34.507 | 142 | 81 | 4 | 62 | 192 | 109 | 249 | 7.82e-20 | 89.7 |
| Msa0602120 | MtrunA17_Chr4g0026521 | 36.691 | 139 | 79 | 4 | 62 | 192 | 125 | 262 | 8.99e-20 | 89.7 |
| Msa0602120 | MtrunA17_Chr8g0352011 | 36.691 | 139 | 79 | 4 | 62 | 192 | 173 | 310 | 1.16e-19 | 90.1 |
| Msa0602120 | MtrunA17_Chr2g0321291 | 38.129 | 139 | 77 | 4 | 62 | 192 | 140 | 277 | 2.00e-19 | 89.0 |
| Msa0602120 | MtrunA17_Chr1g0173841 | 35.971 | 139 | 80 | 4 | 62 | 192 | 222 | 359 | 5.40e-19 | 89.0 |
| Msa0602120 | MtrunA17_Chr2g0328921 | 35.971 | 139 | 80 | 4 | 62 | 192 | 145 | 282 | 8.67e-19 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0602120 | AT3G45260.2 | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 2.28e-110 | 335 |
| Msa0602120 | AT3G45260.1 | 79.775 | 178 | 36 | 0 | 38 | 215 | 38 | 215 | 2.28e-110 | 335 |
| Msa0602120 | AT3G50700.1 | 76.562 | 192 | 40 | 3 | 14 | 202 | 7 | 196 | 4.34e-109 | 332 |
| Msa0602120 | AT5G60470.2 | 69.856 | 209 | 55 | 2 | 11 | 211 | 8 | 216 | 8.03e-109 | 331 |
| Msa0602120 | AT5G60470.3 | 69.856 | 209 | 55 | 2 | 11 | 211 | 4 | 212 | 8.72e-109 | 331 |
| Msa0602120 | AT5G03150.1 | 54.142 | 338 | 125 | 8 | 38 | 348 | 52 | 386 | 2.37e-107 | 329 |
| Msa0602120 | AT5G66730.1 | 77.895 | 190 | 39 | 3 | 14 | 202 | 7 | 194 | 1.02e-106 | 327 |
| Msa0602120 | AT1G03840.1 | 82.353 | 170 | 29 | 1 | 34 | 203 | 36 | 204 | 1.63e-106 | 327 |
| Msa0602120 | AT5G44160.1 | 44.776 | 469 | 212 | 13 | 13 | 461 | 11 | 452 | 3.05e-106 | 325 |
| Msa0602120 | AT2G02080.1 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 1.43e-105 | 325 |
| Msa0602120 | AT2G02080.4 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 1.43e-105 | 325 |
| Msa0602120 | AT2G02080.5 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 1.43e-105 | 325 |
| Msa0602120 | AT2G02080.3 | 41.189 | 471 | 197 | 11 | 31 | 461 | 46 | 476 | 1.43e-105 | 325 |
| Msa0602120 | AT1G55110.3 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.55e-105 | 323 |
| Msa0602120 | AT1G55110.1 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.55e-105 | 323 |
| Msa0602120 | AT1G55110.2 | 80.814 | 172 | 33 | 0 | 39 | 210 | 63 | 234 | 1.55e-105 | 323 |
| Msa0602120 | AT3G13810.6 | 79.310 | 174 | 36 | 0 | 33 | 206 | 45 | 218 | 8.75e-104 | 320 |
| Msa0602120 | AT3G13810.4 | 79.310 | 174 | 36 | 0 | 33 | 206 | 64 | 237 | 1.15e-103 | 320 |
| Msa0602120 | AT3G13810.1 | 79.310 | 174 | 36 | 0 | 33 | 206 | 64 | 237 | 1.15e-103 | 320 |
| Msa0602120 | AT3G13810.5 | 79.310 | 174 | 36 | 0 | 33 | 206 | 59 | 232 | 1.29e-103 | 320 |
| Msa0602120 | AT4G02670.2 | 81.212 | 165 | 31 | 0 | 39 | 203 | 55 | 219 | 1.83e-103 | 315 |
| Msa0602120 | AT4G02670.1 | 81.212 | 165 | 31 | 0 | 39 | 203 | 53 | 217 | 2.06e-103 | 315 |
| Msa0602120 | AT1G03840.2 | 81.176 | 170 | 29 | 2 | 34 | 203 | 36 | 202 | 7.06e-103 | 317 |
| Msa0602120 | AT1G14580.1 | 77.647 | 170 | 37 | 1 | 37 | 206 | 51 | 219 | 4.57e-102 | 314 |
| Msa0602120 | AT1G14580.2 | 77.647 | 170 | 37 | 1 | 37 | 206 | 51 | 219 | 4.57e-102 | 314 |
| Msa0602120 | AT1G14580.3 | 77.647 | 170 | 37 | 1 | 37 | 206 | 65 | 233 | 9.06e-102 | 314 |
| Msa0602120 | AT5G60470.1 | 77.160 | 162 | 37 | 0 | 50 | 211 | 46 | 207 | 7.10e-98 | 303 |
| Msa0602120 | AT2G02070.2 | 74.713 | 174 | 39 | 2 | 39 | 208 | 52 | 224 | 1.04e-97 | 307 |
| Msa0602120 | AT2G02070.1 | 74.713 | 174 | 39 | 2 | 39 | 208 | 52 | 224 | 1.04e-97 | 307 |
| Msa0602120 | AT5G44160.2 | 44.804 | 433 | 192 | 13 | 49 | 461 | 8 | 413 | 1.49e-97 | 301 |
| Msa0602120 | AT3G13810.3 | 82.166 | 157 | 28 | 0 | 50 | 206 | 68 | 224 | 1.47e-96 | 301 |
| Msa0602120 | AT3G13810.2 | 82.166 | 157 | 28 | 0 | 50 | 206 | 82 | 238 | 1.84e-96 | 301 |
| Msa0602120 | AT2G02080.6 | 39.819 | 442 | 186 | 11 | 63 | 464 | 1 | 402 | 3.87e-90 | 282 |
| Msa0602120 | AT2G02080.2 | 39.819 | 442 | 186 | 11 | 63 | 464 | 1 | 402 | 3.87e-90 | 282 |
| Msa0602120 | AT1G68130.1 | 61.350 | 163 | 62 | 1 | 32 | 193 | 34 | 196 | 2.21e-72 | 236 |
| Msa0602120 | AT2G01940.1 | 62.025 | 158 | 59 | 1 | 39 | 195 | 44 | 201 | 4.71e-71 | 233 |
| Msa0602120 | AT1G25250.3 | 62.420 | 157 | 57 | 2 | 39 | 193 | 33 | 189 | 7.05e-71 | 231 |
| Msa0602120 | AT2G01940.3 | 61.006 | 159 | 60 | 2 | 39 | 195 | 44 | 202 | 3.13e-67 | 223 |
| Msa0602120 | AT1G25250.1 | 62.585 | 147 | 53 | 2 | 49 | 193 | 20 | 166 | 2.02e-66 | 218 |
| Msa0602120 | AT1G68130.2 | 61.818 | 110 | 41 | 1 | 85 | 193 | 1 | 110 | 7.35e-45 | 160 |
| Msa0602120 | AT2G01940.2 | 61.607 | 112 | 42 | 1 | 85 | 195 | 1 | 112 | 1.21e-44 | 160 |
| Msa0602120 | AT1G25250.2 | 62.162 | 111 | 40 | 2 | 85 | 193 | 1 | 111 | 2.10e-44 | 159 |
| Msa0602120 | AT1G34370.3 | 33.714 | 175 | 103 | 4 | 48 | 209 | 14 | 188 | 2.31e-24 | 103 |
| Msa0602120 | AT1G34370.2 | 33.714 | 175 | 103 | 4 | 48 | 209 | 224 | 398 | 6.70e-24 | 105 |
| Msa0602120 | AT1G34370.1 | 33.714 | 175 | 103 | 4 | 48 | 209 | 224 | 398 | 6.70e-24 | 105 |
| Msa0602120 | AT5G22890.1 | 31.609 | 174 | 106 | 4 | 32 | 192 | 181 | 354 | 3.55e-23 | 101 |
| Msa0602120 | AT1G13290.1 | 30.455 | 220 | 127 | 7 | 12 | 206 | 30 | 248 | 1.63e-22 | 98.2 |
| Msa0602120 | AT1G51220.1 | 32.317 | 164 | 93 | 5 | 62 | 217 | 172 | 325 | 9.90e-20 | 90.9 |
| Msa0602120 | AT1G08290.1 | 38.519 | 135 | 73 | 4 | 67 | 192 | 179 | 312 | 5.75e-19 | 88.6 |
| Msa0602120 | AT3G20880.1 | 35.252 | 139 | 81 | 4 | 62 | 192 | 250 | 387 | 1.11e-18 | 88.6 |
| Msa0602120 | AT1G34790.1 | 36.691 | 139 | 79 | 4 | 62 | 192 | 139 | 276 | 1.79e-18 | 86.7 |
| Msa0602120 | AT3G57670.1 | 35.252 | 139 | 81 | 4 | 62 | 192 | 211 | 348 | 2.30e-18 | 87.4 |
Find 104 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAATAAGTTGGTGAATT+TGG | 0.142711 | 4_2:-45408809 | Msa0602120:CDS |
| CAAGAACTTGGTGAGTTTAA+TGG | 0.196940 | 4_2:-45408538 | Msa0602120:CDS |
| ACAAAATTCTGAATATTTAT+AGG | 0.197521 | 4_2:+45408235 | None:intergenic |
| TTTCAGTTTCACTCAGAATT+TGG | 0.212422 | 4_2:-45409258 | Msa0602120:CDS |
| TTCTGGGCTAATTAAGTAAA+TGG | 0.223061 | 4_2:-45408260 | Msa0602120:three_prime_UTR |
| GCTGGAACTGGATTTGGATT+AGG | 0.245828 | 4_2:+45410467 | None:intergenic |
| TTCTTAGCTGGAACTGGATT+TGG | 0.246398 | 4_2:+45410461 | None:intergenic |
| AGATTGAACTGCATATTTCT+TGG | 0.249648 | 4_2:+45409936 | None:intergenic |
| CTGGAACTGGATTTGGATTA+GGG | 0.258674 | 4_2:+45410468 | None:intergenic |
| CTGGATTTGGATTAGGGTTT+GGG | 0.258906 | 4_2:+45410474 | None:intergenic |
| TCAAATTCAAACAATATGTT+TGG | 0.277577 | 4_2:-45408736 | Msa0602120:CDS |
| GCCGATGAAGCTGCAAATTC+TGG | 0.302791 | 4_2:+45410148 | None:intergenic |
| TTTAATGGAATGGGATCATT+AGG | 0.305018 | 4_2:-45408523 | Msa0602120:CDS |
| TTGGATTAGGGTTTGGGTGT+TGG | 0.305432 | 4_2:+45410480 | None:intergenic |
| AGCTCTCATGGTGCTGGAAT+TGG | 0.305838 | 4_2:+45410520 | None:intergenic |
| CAAAATTCTGAATATTTATA+GGG | 0.311284 | 4_2:+45408236 | None:intergenic |
| TGTGAATGGTACAAAGGATT+TGG | 0.314338 | 4_2:-45408710 | Msa0602120:CDS |
| ATGAACTTGCCTGGTGTTCC+TGG | 0.325816 | 4_2:+45410425 | None:intergenic |
| CCATGAACCTTCTAGAGCTT+TGG | 0.326353 | 4_2:-45410031 | Msa0602120:CDS |
| ACTGGATTTGGATTAGGGTT+TGG | 0.339241 | 4_2:+45410473 | None:intergenic |
| CAAATTCAAACAATATGTTT+GGG | 0.356792 | 4_2:-45408735 | Msa0602120:CDS |
| AATAGACAAATGTATGATTC+AGG | 0.359404 | 4_2:-45408652 | Msa0602120:CDS |
| CAGCAGCATTAAGCAACTTT+CGG | 0.370255 | 4_2:-45409335 | Msa0602120:CDS |
| CATGAACCTTCTAGAGCTTT+GGG | 0.370674 | 4_2:-45410030 | Msa0602120:CDS |
| AATCTCTTGTAAAACCCATT+TGG | 0.383514 | 4_2:+45408608 | None:intergenic |
| TCTAAATTGTAGTTTGATAG+TGG | 0.384198 | 4_2:-45408328 | Msa0602120:three_prime_UTR |
| TGTGAACTTAACAAGAGATT+AGG | 0.385961 | 4_2:-45408365 | Msa0602120:three_prime_UTR |
| AGAGATTAGGATTTCTATCA+TGG | 0.390793 | 4_2:-45408352 | Msa0602120:three_prime_UTR |
| AGCAATAGCAGCACCAATCT+TGG | 0.398971 | 4_2:-45408781 | Msa0602120:CDS |
| CGAAAGTTGCTTAATGCTGC+TGG | 0.400098 | 4_2:+45409336 | None:intergenic |
| GTTGTTACTGACAAGTGATT+TGG | 0.406986 | 4_2:+45408976 | None:intergenic |
| CCAAAGCTCTAGAAGGTTCA+TGG | 0.410521 | 4_2:+45410031 | None:intergenic |
| AATAATCTCCAGAGCCAGTA+TGG | 0.415643 | 4_2:-45408499 | Msa0602120:CDS |
| CTTGGTGAGTTTAATGGAAT+GGG | 0.417145 | 4_2:-45408532 | Msa0602120:CDS |
| CCATGTAGCATTGGCAAAGA+TGG | 0.419067 | 4_2:+45409099 | None:intergenic |
| GAAGACTGTGTTATTATCAT+TGG | 0.421766 | 4_2:+45408903 | None:intergenic |
| GCTGCAAATTCTGGTCTCTC+TGG | 0.424694 | 4_2:+45410157 | None:intergenic |
| AATATGCAGTTCAATCTGAT+TGG | 0.433651 | 4_2:-45409930 | Msa0602120:CDS |
| GGAATGAGGTGAAACTGAAA+AGG | 0.435372 | 4_2:+45410541 | None:intergenic |
| CCACTTTCACATTGTTAATG+AGG | 0.436319 | 4_2:-45408869 | Msa0602120:CDS |
| AAATCTCCCAAAGCTCTAGA+AGG | 0.438385 | 4_2:+45410024 | None:intergenic |
| GCTCTTTGCTTCAGCTTCCA+TGG | 0.444326 | 4_2:+45410111 | None:intergenic |
| ATGCAAACAATGGATGTGTT+TGG | 0.447388 | 4_2:-45409159 | Msa0602120:CDS |
| TAAATACCCACCTCCAAGAT+TGG | 0.449616 | 4_2:+45408768 | None:intergenic |
| GTTGCAGAAAGAATCTCAAA+TGG | 0.449863 | 4_2:-45408947 | Msa0602120:CDS |
| CAAAGATCAAATTCGAAAGA+AGG | 0.450162 | 4_2:-45410085 | Msa0602120:CDS |
| TTATGTGAAATCTGCAACAA+GGG | 0.451384 | 4_2:-45410183 | Msa0602120:CDS |
| TATGTCACCAAAGTCATTGA+TGG | 0.456254 | 4_2:-45410220 | Msa0602120:CDS |
| TTTGCTTCAGCTTCCATGGT+AGG | 0.459248 | 4_2:+45410115 | None:intergenic |
| ACTTGGTGAGTTTAATGGAA+TGG | 0.460921 | 4_2:-45408533 | Msa0602120:CDS |
| AGTAGTGTCCACCACCATAC+TGG | 0.466451 | 4_2:+45408485 | None:intergenic |
| GAAAACATGGTGAGAAGAAG+TGG | 0.467136 | 4_2:-45409975 | Msa0602120:CDS |
| TTCATTACTCCATGTAGCAT+TGG | 0.470776 | 4_2:+45409090 | None:intergenic |
| CCTCATTAACAATGTGAAAG+TGG | 0.472482 | 4_2:+45408869 | None:intergenic |
| CCATCTTTGCCAATGCTACA+TGG | 0.474776 | 4_2:-45409099 | Msa0602120:CDS |
| TTTGTCGCCATCAATGACTT+TGG | 0.484591 | 4_2:+45410213 | None:intergenic |
| ATTTGATGAGGAAGCTCTCA+TGG | 0.486833 | 4_2:+45410508 | None:intergenic |
| ATGCTAAAGGAAAATATCAC+AGG | 0.487164 | 4_2:+45408175 | None:intergenic |
| ACCAGAATTTGCAGCTTCAT+CGG | 0.488033 | 4_2:-45410149 | Msa0602120:CDS |
| ATAGCAACCACTTCTGATTC+CGG | 0.489329 | 4_2:+45410240 | None:intergenic |
| TGAGGAAGCTCTCATGGTGC+TGG | 0.495516 | 4_2:+45410514 | None:intergenic |
| TGGTGCACACAAGTCTTCTC+AGG | 0.500242 | 4_2:+45410051 | None:intergenic |
| AGAGCTTTGGGAGATTTGAC+AGG | 0.501432 | 4_2:-45410018 | Msa0602120:CDS |
| AGCAGCACCAATCTTGGAGG+TGG | 0.501855 | 4_2:-45408775 | Msa0602120:CDS |
| AAAGCTCATAGCAAGATTTG+TGG | 0.506969 | 4_2:-45409907 | Msa0602120:CDS |
| TGCAGATTTCACATAAGAAA+CGG | 0.507472 | 4_2:+45410190 | None:intergenic |
| GTCCACCACCATACTGGCTC+TGG | 0.507855 | 4_2:+45408491 | None:intergenic |
| GAATAAGTTGGTGAATTTGG+AGG | 0.513790 | 4_2:-45408806 | Msa0602120:CDS |
| AACATCATCAGAACCACCAT+TGG | 0.518482 | 4_2:-45409226 | Msa0602120:CDS |
| AATATGTTTGGGATTGTGAA+TGG | 0.518566 | 4_2:-45408724 | Msa0602120:CDS |
| CTCCAGAGCCAGTATGGTGG+TGG | 0.533266 | 4_2:-45408493 | Msa0602120:CDS |
| AAATGTATGATTCAGGTTCA+AGG | 0.535524 | 4_2:-45408645 | Msa0602120:CDS |
| TTCTGATATAATGCAAACAA+TGG | 0.536311 | 4_2:-45409169 | Msa0602120:CDS |
| AATAAGTTGGTGAATTTGGA+GGG | 0.537676 | 4_2:-45408805 | Msa0602120:CDS |
| TTGCAGAAAGAATCTCAAAT+GGG | 0.545569 | 4_2:-45408946 | Msa0602120:CDS |
| TACAAAGGATTTGGAACATG+TGG | 0.546663 | 4_2:-45408701 | Msa0602120:CDS |
| ACTTGCCTGGTGTTCCTGGT+AGG | 0.547354 | 4_2:+45410429 | None:intergenic |
| CTTATGTGAAATCTGCAACA+AGG | 0.550563 | 4_2:-45410184 | Msa0602120:CDS |
| ACATCATCAGAACCACCATT+GGG | 0.553100 | 4_2:-45409225 | Msa0602120:CDS |
| TAGTTTGATAGTGGTAATTG+TGG | 0.556396 | 4_2:-45408319 | Msa0602120:three_prime_UTR |
| AGAAACCTACCAGGAACACC+AGG | 0.557766 | 4_2:-45410434 | Msa0602120:intron |
| TTAGTGTAATTTCCCAATGG+TGG | 0.567890 | 4_2:+45409213 | None:intergenic |
| TTGTGGTTGCAATGCCGTTG+TGG | 0.590967 | 4_2:-45408302 | Msa0602120:three_prime_UTR |
| GAATGAGGTGAAACTGAAAA+GGG | 0.590975 | 4_2:+45410542 | None:intergenic |
| AATAGCAGCACCAATCTTGG+AGG | 0.592274 | 4_2:-45408778 | Msa0602120:CDS |
| TGGGATTGTGAATGGTACAA+AGG | 0.593396 | 4_2:-45408716 | Msa0602120:CDS |
| AAGTGAAGAGTTGAATAAGT+TGG | 0.597167 | 4_2:-45408818 | Msa0602120:CDS |
| AATCTCAAATGGGATCTACA+AGG | 0.601252 | 4_2:-45408936 | Msa0602120:CDS |
| TCTGAGTGAAACTGAAAACC+AGG | 0.601782 | 4_2:+45409264 | None:intergenic |
| AGAGAGTACAAATGTGATTG+TGG | 0.604424 | 4_2:-45409880 | Msa0602120:CDS |
| GGCGAGGACACAACCTACCA+TGG | 0.608097 | 4_2:-45410128 | Msa0602120:CDS |
| TCCAGATCCGGAATCAGAAG+TGG | 0.621390 | 4_2:-45410247 | Msa0602120:intron |
| GCAGCACCAATCTTGGAGGT+GGG | 0.638474 | 4_2:-45408774 | Msa0602120:CDS |
| GTGTTGGACTTGATTTGATG+AGG | 0.644794 | 4_2:+45410496 | None:intergenic |
| AAACATTATAGTAGAAAACA+TGG | 0.647572 | 4_2:-45409988 | Msa0602120:CDS |
| ATGTTAGTGTAATTTCCCAA+TGG | 0.651961 | 4_2:+45409210 | None:intergenic |
| TGCTAAAGGAAAATATCACA+GGG | 0.654134 | 4_2:+45408176 | None:intergenic |
| AATTTGCAGCTTCATCGGCG+AGG | 0.683827 | 4_2:-45410144 | Msa0602120:CDS |
| ATGGTGCTGGAATTGGAATG+AGG | 0.685103 | 4_2:+45410527 | None:intergenic |
| AATCTCCAGAGCCAGTATGG+TGG | 0.695447 | 4_2:-45408496 | Msa0602120:CDS |
| TTATTATAATTCAGCCACTG+TGG | 0.703090 | 4_2:+45409129 | None:intergenic |
| ATTAGATTAGGGCTCCACAA+CGG | 0.703546 | 4_2:+45408288 | None:intergenic |
| ACAAAGTGCAAAGATAACAA+CGG | 0.712713 | 4_2:-45409361 | Msa0602120:CDS |
| TGTTTGGATCACAACCACAG+TGG | 0.860213 | 4_2:-45409143 | Msa0602120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAACTTAATGTATTTAGA+AGG | + | chr4_2:45409178-45409197 | None:intergenic | 15.0% |
| !!! | TTTGGAATAAATAATAAATG+AGG | - | chr4_2:45409244-45409263 | Msa0602120:CDS | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr4_2:45410507-45410526 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr4_2:45410508-45410527 | None:intergenic | 15.0% |
| !!! | TTTAACTTAATGTATTTAGA+AGG | + | chr4_2:45409178-45409197 | None:intergenic | 15.0% |
| !!! | TTTGGAATAAATAATAAATG+AGG | - | chr4_2:45409244-45409263 | Msa0602120:CDS | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr4_2:45410507-45410526 | None:intergenic | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr4_2:45410508-45410527 | None:intergenic | 15.0% |
| !! | TAATGATATATAGAAGAGAA+AGG | + | chr4_2:45408361-45408380 | None:intergenic | 20.0% |
| !! | AAACATTATAGTAGAAAACA+TGG | - | chr4_2:45408752-45408771 | Msa0602120:CDS | 20.0% |
| !! | AGATAGTAAATATATATACC+TGG | + | chr4_2:45408897-45408916 | None:intergenic | 20.0% |
| !! | CCATTAAAATCATGAAATTA+AGG | + | chr4_2:45409065-45409084 | None:intergenic | 20.0% |
| !!! | CCTTAATTTCATGATTTTAA+TGG | - | chr4_2:45409062-45409081 | Msa0602120:CDS | 20.0% |
| !!! | TAATTTCATGATTTTAATGG+CGG | - | chr4_2:45409065-45409084 | Msa0602120:CDS | 20.0% |
| !! | TCAAATTCAAACAATATGTT+TGG | - | chr4_2:45410004-45410023 | Msa0602120:CDS | 20.0% |
| !! | CAAATTCAAACAATATGTTT+GGG | - | chr4_2:45410005-45410024 | Msa0602120:CDS | 20.0% |
| !! | TCAAAAGAAAAAAACCAAAT+GGG | - | chr4_2:45410118-45410137 | Msa0602120:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr4_2:45410538-45410557 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr4_2:45410539-45410558 | None:intergenic | 20.0% |
| !! | TAATGATATATAGAAGAGAA+AGG | + | chr4_2:45408361-45408380 | None:intergenic | 20.0% |
| !! | AAACATTATAGTAGAAAACA+TGG | - | chr4_2:45408752-45408771 | Msa0602120:CDS | 20.0% |
| !! | AGATAGTAAATATATATACC+TGG | + | chr4_2:45408897-45408916 | None:intergenic | 20.0% |
| !! | CCATTAAAATCATGAAATTA+AGG | + | chr4_2:45409065-45409084 | None:intergenic | 20.0% |
| !!! | CCTTAATTTCATGATTTTAA+TGG | - | chr4_2:45409062-45409081 | Msa0602120:CDS | 20.0% |
| !!! | TAATTTCATGATTTTAATGG+CGG | - | chr4_2:45409065-45409084 | Msa0602120:CDS | 20.0% |
| !! | TCAAATTCAAACAATATGTT+TGG | - | chr4_2:45410004-45410023 | Msa0602120:CDS | 20.0% |
| !! | CAAATTCAAACAATATGTTT+GGG | - | chr4_2:45410005-45410024 | Msa0602120:CDS | 20.0% |
| !! | TCAAAAGAAAAAAACCAAAT+GGG | - | chr4_2:45410118-45410137 | Msa0602120:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr4_2:45410538-45410557 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr4_2:45410539-45410558 | None:intergenic | 20.0% |
| !!! | CAATTTCACAACTACTTTTT+CGG | + | chr4_2:45409112-45409131 | None:intergenic | 25.0% |
| ! | TAATTGAAGGAATGTTTGTT+TGG | - | chr4_2:45409226-45409245 | Msa0602120:CDS | 25.0% |
| ! | ATTATGTGTGTTAACAAATC+AGG | - | chr4_2:45409309-45409328 | Msa0602120:CDS | 25.0% |
| ! | TTCTGATATAATGCAAACAA+TGG | - | chr4_2:45409571-45409590 | Msa0602120:intron | 25.0% |
| ! | AATAGACAAATGTATGATTC+AGG | - | chr4_2:45410088-45410107 | Msa0602120:CDS | 25.0% |
| ! | GTCAAAAGAAAAAAACCAAA+TGG | - | chr4_2:45410117-45410136 | Msa0602120:CDS | 25.0% |
| !! | GTTTTACAAGAGATTTTCTT+GGG | - | chr4_2:45410140-45410159 | Msa0602120:CDS | 25.0% |
| !! | TTTTACAAGAGATTTTCTTG+GGG | - | chr4_2:45410141-45410160 | Msa0602120:CDS | 25.0% |
| ! | TCTAAATTGTAGTTTGATAG+TGG | - | chr4_2:45410412-45410431 | Msa0602120:intron | 25.0% |
| ! | CCAGAACAAAAATTAGATTA+GGG | + | chr4_2:45410466-45410485 | None:intergenic | 25.0% |
| !! | CCTAATCTAATTTTTGTTCT+GGG | - | chr4_2:45410464-45410483 | Msa0602120:CDS | 25.0% |
| !!! | CAATTTCACAACTACTTTTT+CGG | + | chr4_2:45409112-45409131 | None:intergenic | 25.0% |
| ! | TAATTGAAGGAATGTTTGTT+TGG | - | chr4_2:45409226-45409245 | Msa0602120:CDS | 25.0% |
| ! | ATTATGTGTGTTAACAAATC+AGG | - | chr4_2:45409309-45409328 | Msa0602120:CDS | 25.0% |
| ! | TTCTGATATAATGCAAACAA+TGG | - | chr4_2:45409571-45409590 | Msa0602120:intron | 25.0% |
| ! | AATAGACAAATGTATGATTC+AGG | - | chr4_2:45410088-45410107 | Msa0602120:CDS | 25.0% |
| ! | GTCAAAAGAAAAAAACCAAA+TGG | - | chr4_2:45410117-45410136 | Msa0602120:CDS | 25.0% |
| !! | GTTTTACAAGAGATTTTCTT+GGG | - | chr4_2:45410140-45410159 | Msa0602120:CDS | 25.0% |
| !! | TTTTACAAGAGATTTTCTTG+GGG | - | chr4_2:45410141-45410160 | Msa0602120:CDS | 25.0% |
| ! | TCTAAATTGTAGTTTGATAG+TGG | - | chr4_2:45410412-45410431 | Msa0602120:intron | 25.0% |
| ! | CCAGAACAAAAATTAGATTA+GGG | + | chr4_2:45410466-45410485 | None:intergenic | 25.0% |
| !! | CCTAATCTAATTTTTGTTCT+GGG | - | chr4_2:45410464-45410483 | Msa0602120:CDS | 25.0% |
| !!! | AGGTTTCTTTTTTTCTTAGC+TGG | + | chr4_2:45408294-45408313 | None:intergenic | 30.0% |
| AAGAAAAAAAGAAACCTACC+AGG | - | chr4_2:45408297-45408316 | Msa0602120:three_prime_UTR | 30.0% | |
| TATTACTAAATGAACTTGCC+TGG | + | chr4_2:45408327-45408346 | None:intergenic | 30.0% | |
| TGCAGATTTCACATAAGAAA+CGG | + | chr4_2:45408553-45408572 | None:intergenic | 30.0% | |
| TTATGTGAAATCTGCAACAA+GGG | - | chr4_2:45408557-45408576 | Msa0602120:CDS | 30.0% | |
| CAAAGATCAAATTCGAAAGA+AGG | - | chr4_2:45408655-45408674 | Msa0602120:CDS | 30.0% | |
| AGATTGAACTGCATATTTCT+TGG | + | chr4_2:45408807-45408826 | None:intergenic | 30.0% | |
| AATATGCAGTTCAATCTGAT+TGG | - | chr4_2:45408810-45408829 | Msa0602120:CDS | 30.0% | |
| CGAAAAAGTAGTTGTGAAAT+TGG | - | chr4_2:45409110-45409129 | Msa0602120:CDS | 30.0% | |
| AAAAGTAGTTGTGAAATTGG+TGG | - | chr4_2:45409113-45409132 | Msa0602120:CDS | 30.0% | |
| AAAGTAGTTGTGAAATTGGT+GGG | - | chr4_2:45409114-45409133 | Msa0602120:CDS | 30.0% | |
| TTTAAATTGCAGCAGTCTAA+AGG | + | chr4_2:45409153-45409172 | None:intergenic | 30.0% | |
| CATGTGACAGATATAATTGA+AGG | - | chr4_2:45409213-45409232 | Msa0602120:CDS | 30.0% | |
| ACAAAGTGCAAAGATAACAA+CGG | - | chr4_2:45409379-45409398 | Msa0602120:CDS | 30.0% | |
| GGAAAAATATGAGGAATTCT+TGG | + | chr4_2:45409458-45409477 | None:intergenic | 30.0% | |
| ! | AGAATTCCTCATATTTTTCC+TGG | - | chr4_2:45409458-45409477 | Msa0602120:intron | 30.0% |
| TGAAAACCAGGAAAAATATG+AGG | + | chr4_2:45409467-45409486 | None:intergenic | 30.0% | |
| TTTCAGTTTCACTCAGAATT+TGG | - | chr4_2:45409482-45409501 | Msa0602120:intron | 30.0% | |
| ATGTTAGTGTAATTTCCCAA+TGG | + | chr4_2:45409533-45409552 | None:intergenic | 30.0% | |
| TTATTATAATTCAGCCACTG+TGG | + | chr4_2:45409614-45409633 | None:intergenic | 30.0% | |
| TTGCAGAAAGAATCTCAAAT+GGG | - | chr4_2:45409794-45409813 | Msa0602120:intron | 30.0% | |
| ! | GAAGACTGTGTTATTATCAT+TGG | + | chr4_2:45409840-45409859 | None:intergenic | 30.0% |
| AAGTGAAGAGTTGAATAAGT+TGG | - | chr4_2:45409922-45409941 | Msa0602120:CDS | 30.0% | |
| !! | GTTGAATAAGTTGGTGAATT+TGG | - | chr4_2:45409931-45409950 | Msa0602120:CDS | 30.0% |
| !! | AATAAGTTGGTGAATTTGGA+GGG | - | chr4_2:45409935-45409954 | Msa0602120:CDS | 30.0% |
| ! | AATATGTTTGGGATTGTGAA+TGG | - | chr4_2:45410016-45410035 | Msa0602120:CDS | 30.0% |
| ! | AAATGTATGATTCAGGTTCA+AGG | - | chr4_2:45410095-45410114 | Msa0602120:CDS | 30.0% |
| AATCTCTTGTAAAACCCATT+TGG | + | chr4_2:45410135-45410154 | None:intergenic | 30.0% | |
| ! | GGTTTTACAAGAGATTTTCT+TGG | - | chr4_2:45410139-45410158 | Msa0602120:CDS | 30.0% |
| TTTAATGGAATGGGATCATT+AGG | - | chr4_2:45410217-45410236 | Msa0602120:CDS | 30.0% | |
| TGTGAACTTAACAAGAGATT+AGG | - | chr4_2:45410375-45410394 | Msa0602120:intron | 30.0% | |
| AGAGATTAGGATTTCTATCA+TGG | - | chr4_2:45410388-45410407 | Msa0602120:intron | 30.0% | |
| !! | TAGTTTGATAGTGGTAATTG+TGG | - | chr4_2:45410421-45410440 | Msa0602120:intron | 30.0% |
| ! | CCCTAATCTAATTTTTGTTC+TGG | - | chr4_2:45410463-45410482 | Msa0602120:CDS | 30.0% |
| CCCAGAACAAAAATTAGATT+AGG | + | chr4_2:45410467-45410486 | None:intergenic | 30.0% | |
| TTCTGGGCTAATTAAGTAAA+TGG | - | chr4_2:45410480-45410499 | Msa0602120:CDS | 30.0% | |
| !!! | AGGTTTCTTTTTTTCTTAGC+TGG | + | chr4_2:45408294-45408313 | None:intergenic | 30.0% |
| AAGAAAAAAAGAAACCTACC+AGG | - | chr4_2:45408297-45408316 | Msa0602120:three_prime_UTR | 30.0% | |
| TATTACTAAATGAACTTGCC+TGG | + | chr4_2:45408327-45408346 | None:intergenic | 30.0% | |
| TGCAGATTTCACATAAGAAA+CGG | + | chr4_2:45408553-45408572 | None:intergenic | 30.0% | |
| TTATGTGAAATCTGCAACAA+GGG | - | chr4_2:45408557-45408576 | Msa0602120:CDS | 30.0% | |
| CAAAGATCAAATTCGAAAGA+AGG | - | chr4_2:45408655-45408674 | Msa0602120:CDS | 30.0% | |
| AGATTGAACTGCATATTTCT+TGG | + | chr4_2:45408807-45408826 | None:intergenic | 30.0% | |
| AATATGCAGTTCAATCTGAT+TGG | - | chr4_2:45408810-45408829 | Msa0602120:CDS | 30.0% | |
| CGAAAAAGTAGTTGTGAAAT+TGG | - | chr4_2:45409110-45409129 | Msa0602120:CDS | 30.0% | |
| AAAAGTAGTTGTGAAATTGG+TGG | - | chr4_2:45409113-45409132 | Msa0602120:CDS | 30.0% | |
| AAAGTAGTTGTGAAATTGGT+GGG | - | chr4_2:45409114-45409133 | Msa0602120:CDS | 30.0% | |
| TTTAAATTGCAGCAGTCTAA+AGG | + | chr4_2:45409153-45409172 | None:intergenic | 30.0% | |
| CATGTGACAGATATAATTGA+AGG | - | chr4_2:45409213-45409232 | Msa0602120:CDS | 30.0% | |
| ACAAAGTGCAAAGATAACAA+CGG | - | chr4_2:45409379-45409398 | Msa0602120:CDS | 30.0% | |
| GGAAAAATATGAGGAATTCT+TGG | + | chr4_2:45409458-45409477 | None:intergenic | 30.0% | |
| ! | AGAATTCCTCATATTTTTCC+TGG | - | chr4_2:45409458-45409477 | Msa0602120:intron | 30.0% |
| TGAAAACCAGGAAAAATATG+AGG | + | chr4_2:45409467-45409486 | None:intergenic | 30.0% | |
| TTTCAGTTTCACTCAGAATT+TGG | - | chr4_2:45409482-45409501 | Msa0602120:intron | 30.0% | |
| ATGTTAGTGTAATTTCCCAA+TGG | + | chr4_2:45409533-45409552 | None:intergenic | 30.0% | |
| TTATTATAATTCAGCCACTG+TGG | + | chr4_2:45409614-45409633 | None:intergenic | 30.0% | |
| TTGCAGAAAGAATCTCAAAT+GGG | - | chr4_2:45409794-45409813 | Msa0602120:intron | 30.0% | |
| ! | GAAGACTGTGTTATTATCAT+TGG | + | chr4_2:45409840-45409859 | None:intergenic | 30.0% |
| AAGTGAAGAGTTGAATAAGT+TGG | - | chr4_2:45409922-45409941 | Msa0602120:CDS | 30.0% | |
| !! | GTTGAATAAGTTGGTGAATT+TGG | - | chr4_2:45409931-45409950 | Msa0602120:CDS | 30.0% |
| !! | AATAAGTTGGTGAATTTGGA+GGG | - | chr4_2:45409935-45409954 | Msa0602120:CDS | 30.0% |
| ! | AATATGTTTGGGATTGTGAA+TGG | - | chr4_2:45410016-45410035 | Msa0602120:CDS | 30.0% |
| ! | AAATGTATGATTCAGGTTCA+AGG | - | chr4_2:45410095-45410114 | Msa0602120:CDS | 30.0% |
| AATCTCTTGTAAAACCCATT+TGG | + | chr4_2:45410135-45410154 | None:intergenic | 30.0% | |
| ! | GGTTTTACAAGAGATTTTCT+TGG | - | chr4_2:45410139-45410158 | Msa0602120:CDS | 30.0% |
| TTTAATGGAATGGGATCATT+AGG | - | chr4_2:45410217-45410236 | Msa0602120:CDS | 30.0% | |
| TGTGAACTTAACAAGAGATT+AGG | - | chr4_2:45410375-45410394 | Msa0602120:intron | 30.0% | |
| AGAGATTAGGATTTCTATCA+TGG | - | chr4_2:45410388-45410407 | Msa0602120:intron | 30.0% | |
| !! | TAGTTTGATAGTGGTAATTG+TGG | - | chr4_2:45410421-45410440 | Msa0602120:intron | 30.0% |
| ! | CCCTAATCTAATTTTTGTTC+TGG | - | chr4_2:45410463-45410482 | Msa0602120:CDS | 30.0% |
| CCCAGAACAAAAATTAGATT+AGG | + | chr4_2:45410467-45410486 | None:intergenic | 30.0% | |
| TTCTGGGCTAATTAAGTAAA+TGG | - | chr4_2:45410480-45410499 | Msa0602120:CDS | 30.0% | |
| GAATGAGGTGAAACTGAAAA+GGG | + | chr4_2:45408201-45408220 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTTAGCTGGAAC+TGG | + | chr4_2:45408288-45408307 | None:intergenic | 35.0% |
| TATGTCACCAAAGTCATTGA+TGG | - | chr4_2:45408520-45408539 | Msa0602120:CDS | 35.0% | |
| CTTATGTGAAATCTGCAACA+AGG | - | chr4_2:45408556-45408575 | Msa0602120:CDS | 35.0% | |
| AAAGCTCATAGCAAGATTTG+TGG | - | chr4_2:45408833-45408852 | Msa0602120:CDS | 35.0% | |
| ! | AGAGAGTACAAATGTGATTG+TGG | - | chr4_2:45408860-45408879 | Msa0602120:CDS | 35.0% |
| !!! | AACTACTTTTTCGGTTGCAT+TGG | + | chr4_2:45409103-45409122 | None:intergenic | 35.0% |
| AAGTAGTTGTGAAATTGGTG+GGG | - | chr4_2:45409115-45409134 | Msa0602120:CDS | 35.0% | |
| TGTGTGTTAACAAATCAGGA+AGG | - | chr4_2:45409313-45409332 | Msa0602120:CDS | 35.0% | |
| TTAGTGTAATTTCCCAATGG+TGG | + | chr4_2:45409530-45409549 | None:intergenic | 35.0% | |
| ATGCAAACAATGGATGTGTT+TGG | - | chr4_2:45409581-45409600 | Msa0602120:intron | 35.0% | |
| TTCATTACTCCATGTAGCAT+TGG | + | chr4_2:45409653-45409672 | None:intergenic | 35.0% | |
| GTTGTTACTGACAAGTGATT+TGG | + | chr4_2:45409767-45409786 | None:intergenic | 35.0% | |
| GTTGCAGAAAGAATCTCAAA+TGG | - | chr4_2:45409793-45409812 | Msa0602120:intron | 35.0% | |
| AATCTCAAATGGGATCTACA+AGG | - | chr4_2:45409804-45409823 | Msa0602120:intron | 35.0% | |
| CCTCATTAACAATGTGAAAG+TGG | + | chr4_2:45409874-45409893 | None:intergenic | 35.0% | |
| CCACTTTCACATTGTTAATG+AGG | - | chr4_2:45409871-45409890 | Msa0602120:CDS | 35.0% | |
| !! | GAATAAGTTGGTGAATTTGG+AGG | - | chr4_2:45409934-45409953 | Msa0602120:CDS | 35.0% |
| TGTGAATGGTACAAAGGATT+TGG | - | chr4_2:45410030-45410049 | Msa0602120:CDS | 35.0% | |
| ! | TACAAAGGATTTGGAACATG+TGG | - | chr4_2:45410039-45410058 | Msa0602120:CDS | 35.0% |
| ! | CAAGAACTTGGTGAGTTTAA+TGG | - | chr4_2:45410202-45410221 | Msa0602120:CDS | 35.0% |
| ! | ACTTGGTGAGTTTAATGGAA+TGG | - | chr4_2:45410207-45410226 | Msa0602120:CDS | 35.0% |
| CTTGGTGAGTTTAATGGAAT+GGG | - | chr4_2:45410208-45410227 | Msa0602120:CDS | 35.0% | |
| AAAGGGTTGTTTAGACATCA+TGG | + | chr4_2:45408184-45408203 | None:intergenic | 35.0% | |
| GAATGAGGTGAAACTGAAAA+GGG | + | chr4_2:45408201-45408220 | None:intergenic | 35.0% | |
| !!! | CTTTTTTTCTTAGCTGGAAC+TGG | + | chr4_2:45408288-45408307 | None:intergenic | 35.0% |
| TATGTCACCAAAGTCATTGA+TGG | - | chr4_2:45408520-45408539 | Msa0602120:CDS | 35.0% | |
| CTTATGTGAAATCTGCAACA+AGG | - | chr4_2:45408556-45408575 | Msa0602120:CDS | 35.0% | |
| AAAGCTCATAGCAAGATTTG+TGG | - | chr4_2:45408833-45408852 | Msa0602120:CDS | 35.0% | |
| ! | AGAGAGTACAAATGTGATTG+TGG | - | chr4_2:45408860-45408879 | Msa0602120:CDS | 35.0% |
| !!! | AACTACTTTTTCGGTTGCAT+TGG | + | chr4_2:45409103-45409122 | None:intergenic | 35.0% |
| AAGTAGTTGTGAAATTGGTG+GGG | - | chr4_2:45409115-45409134 | Msa0602120:CDS | 35.0% | |
| TGTGTGTTAACAAATCAGGA+AGG | - | chr4_2:45409313-45409332 | Msa0602120:CDS | 35.0% | |
| TTAGTGTAATTTCCCAATGG+TGG | + | chr4_2:45409530-45409549 | None:intergenic | 35.0% | |
| ATGCAAACAATGGATGTGTT+TGG | - | chr4_2:45409581-45409600 | Msa0602120:intron | 35.0% | |
| TTCATTACTCCATGTAGCAT+TGG | + | chr4_2:45409653-45409672 | None:intergenic | 35.0% | |
| GTTGTTACTGACAAGTGATT+TGG | + | chr4_2:45409767-45409786 | None:intergenic | 35.0% | |
| GTTGCAGAAAGAATCTCAAA+TGG | - | chr4_2:45409793-45409812 | Msa0602120:intron | 35.0% | |
| AATCTCAAATGGGATCTACA+AGG | - | chr4_2:45409804-45409823 | Msa0602120:intron | 35.0% | |
| CCTCATTAACAATGTGAAAG+TGG | + | chr4_2:45409874-45409893 | None:intergenic | 35.0% | |
| CCACTTTCACATTGTTAATG+AGG | - | chr4_2:45409871-45409890 | Msa0602120:CDS | 35.0% | |
| !! | GAATAAGTTGGTGAATTTGG+AGG | - | chr4_2:45409934-45409953 | Msa0602120:CDS | 35.0% |
| TGTGAATGGTACAAAGGATT+TGG | - | chr4_2:45410030-45410049 | Msa0602120:CDS | 35.0% | |
| ! | TACAAAGGATTTGGAACATG+TGG | - | chr4_2:45410039-45410058 | Msa0602120:CDS | 35.0% |
| ! | CAAGAACTTGGTGAGTTTAA+TGG | - | chr4_2:45410202-45410221 | Msa0602120:CDS | 35.0% |
| ! | ACTTGGTGAGTTTAATGGAA+TGG | - | chr4_2:45410207-45410226 | Msa0602120:CDS | 35.0% |
| CTTGGTGAGTTTAATGGAAT+GGG | - | chr4_2:45410208-45410227 | Msa0602120:CDS | 35.0% | |
| GGAATGAGGTGAAACTGAAA+AGG | + | chr4_2:45408202-45408221 | None:intergenic | 40.0% | |
| ATTTGATGAGGAAGCTCTCA+TGG | + | chr4_2:45408235-45408254 | None:intergenic | 40.0% | |
| ! | GTGTTGGACTTGATTTGATG+AGG | + | chr4_2:45408247-45408266 | None:intergenic | 40.0% |
| ! | CTGGATTTGGATTAGGGTTT+GGG | + | chr4_2:45408269-45408288 | None:intergenic | 40.0% |
| ! | ACTGGATTTGGATTAGGGTT+TGG | + | chr4_2:45408270-45408289 | None:intergenic | 40.0% |
| CTGGAACTGGATTTGGATTA+GGG | + | chr4_2:45408275-45408294 | None:intergenic | 40.0% | |
| TTCTTAGCTGGAACTGGATT+TGG | + | chr4_2:45408282-45408301 | None:intergenic | 40.0% | |
| CACATGAATGAATCCAGATC+CGG | - | chr4_2:45408481-45408500 | Msa0602120:CDS | 40.0% | |
| ATAGCAACCACTTCTGATTC+CGG | + | chr4_2:45408503-45408522 | None:intergenic | 40.0% | |
| TTTGTCGCCATCAATGACTT+TGG | + | chr4_2:45408530-45408549 | None:intergenic | 40.0% | |
| ACCAGAATTTGCAGCTTCAT+CGG | - | chr4_2:45408591-45408610 | Msa0602120:CDS | 40.0% | |
| !! | CATGAACCTTCTAGAGCTTT+GGG | - | chr4_2:45408710-45408729 | Msa0602120:CDS | 40.0% |
| !! | AAATCTCCCAAAGCTCTAGA+AGG | + | chr4_2:45408719-45408738 | None:intergenic | 40.0% |
| GAAAACATGGTGAGAAGAAG+TGG | - | chr4_2:45408765-45408784 | Msa0602120:CDS | 40.0% | |
| ! | ATTGTGGCACAATTTTCTCC+AGG | - | chr4_2:45408876-45408895 | Msa0602120:CDS | 40.0% |
| TCTCAAATCCAACGTGTTCT+TGG | + | chr4_2:45408936-45408955 | None:intergenic | 40.0% | |
| TCAGTAGTGGCTGCAATATA+CGG | - | chr4_2:45408990-45409009 | Msa0602120:CDS | 40.0% | |
| CAGCAGCATTAAGCAACTTT+CGG | - | chr4_2:45409405-45409424 | Msa0602120:CDS | 40.0% | |
| TCTGAGTGAAACTGAAAACC+AGG | + | chr4_2:45409479-45409498 | None:intergenic | 40.0% | |
| AACATCATCAGAACCACCAT+TGG | - | chr4_2:45409514-45409533 | Msa0602120:intron | 40.0% | |
| ACATCATCAGAACCACCATT+GGG | - | chr4_2:45409515-45409534 | Msa0602120:intron | 40.0% | |
| TAAATACCCACCTCCAAGAT+TGG | + | chr4_2:45409975-45409994 | None:intergenic | 40.0% | |
| TGGGATTGTGAATGGTACAA+AGG | - | chr4_2:45410024-45410043 | Msa0602120:CDS | 40.0% | |
| ! | ACAAGAGATTTTCTTGGGGT+TGG | - | chr4_2:45410145-45410164 | Msa0602120:CDS | 40.0% |
| CCAAGTTCTTGCTGCAAAAA+AGG | + | chr4_2:45410193-45410212 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGCAGCAAGAACT+TGG | - | chr4_2:45410190-45410209 | Msa0602120:CDS | 40.0% |
| AATAATCTCCAGAGCCAGTA+TGG | - | chr4_2:45410241-45410260 | Msa0602120:CDS | 40.0% | |
| ATTAGATTAGGGCTCCACAA+CGG | + | chr4_2:45410455-45410474 | None:intergenic | 40.0% | |
| GGAATGAGGTGAAACTGAAA+AGG | + | chr4_2:45408202-45408221 | None:intergenic | 40.0% | |
| ATTTGATGAGGAAGCTCTCA+TGG | + | chr4_2:45408235-45408254 | None:intergenic | 40.0% | |
| ! | GTGTTGGACTTGATTTGATG+AGG | + | chr4_2:45408247-45408266 | None:intergenic | 40.0% |
| ! | CTGGATTTGGATTAGGGTTT+GGG | + | chr4_2:45408269-45408288 | None:intergenic | 40.0% |
| ! | ACTGGATTTGGATTAGGGTT+TGG | + | chr4_2:45408270-45408289 | None:intergenic | 40.0% |
| CTGGAACTGGATTTGGATTA+GGG | + | chr4_2:45408275-45408294 | None:intergenic | 40.0% | |
| TTCTTAGCTGGAACTGGATT+TGG | + | chr4_2:45408282-45408301 | None:intergenic | 40.0% | |
| CACATGAATGAATCCAGATC+CGG | - | chr4_2:45408481-45408500 | Msa0602120:CDS | 40.0% | |
| ATAGCAACCACTTCTGATTC+CGG | + | chr4_2:45408503-45408522 | None:intergenic | 40.0% | |
| TTTGTCGCCATCAATGACTT+TGG | + | chr4_2:45408530-45408549 | None:intergenic | 40.0% | |
| ACCAGAATTTGCAGCTTCAT+CGG | - | chr4_2:45408591-45408610 | Msa0602120:CDS | 40.0% | |
| !! | CATGAACCTTCTAGAGCTTT+GGG | - | chr4_2:45408710-45408729 | Msa0602120:CDS | 40.0% |
| !! | AAATCTCCCAAAGCTCTAGA+AGG | + | chr4_2:45408719-45408738 | None:intergenic | 40.0% |
| GAAAACATGGTGAGAAGAAG+TGG | - | chr4_2:45408765-45408784 | Msa0602120:CDS | 40.0% | |
| ! | ATTGTGGCACAATTTTCTCC+AGG | - | chr4_2:45408876-45408895 | Msa0602120:CDS | 40.0% |
| TCTCAAATCCAACGTGTTCT+TGG | + | chr4_2:45408936-45408955 | None:intergenic | 40.0% | |
| TCAGTAGTGGCTGCAATATA+CGG | - | chr4_2:45408990-45409009 | Msa0602120:CDS | 40.0% | |
| CAGCAGCATTAAGCAACTTT+CGG | - | chr4_2:45409405-45409424 | Msa0602120:CDS | 40.0% | |
| TCTGAGTGAAACTGAAAACC+AGG | + | chr4_2:45409479-45409498 | None:intergenic | 40.0% | |
| AACATCATCAGAACCACCAT+TGG | - | chr4_2:45409514-45409533 | Msa0602120:intron | 40.0% | |
| ACATCATCAGAACCACCATT+GGG | - | chr4_2:45409515-45409534 | Msa0602120:intron | 40.0% | |
| TAAATACCCACCTCCAAGAT+TGG | + | chr4_2:45409975-45409994 | None:intergenic | 40.0% | |
| TGGGATTGTGAATGGTACAA+AGG | - | chr4_2:45410024-45410043 | Msa0602120:CDS | 40.0% | |
| ! | ACAAGAGATTTTCTTGGGGT+TGG | - | chr4_2:45410145-45410164 | Msa0602120:CDS | 40.0% |
| CCAAGTTCTTGCTGCAAAAA+AGG | + | chr4_2:45410193-45410212 | None:intergenic | 40.0% | |
| !!! | CCTTTTTTGCAGCAAGAACT+TGG | - | chr4_2:45410190-45410209 | Msa0602120:CDS | 40.0% |
| AATAATCTCCAGAGCCAGTA+TGG | - | chr4_2:45410241-45410260 | Msa0602120:CDS | 40.0% | |
| ATTAGATTAGGGCTCCACAA+CGG | + | chr4_2:45410455-45410474 | None:intergenic | 40.0% | |
| ! | ATGGTGCTGGAATTGGAATG+AGG | + | chr4_2:45408216-45408235 | None:intergenic | 45.0% |
| ! | TTGGATTAGGGTTTGGGTGT+TGG | + | chr4_2:45408263-45408282 | None:intergenic | 45.0% |
| GCTGGAACTGGATTTGGATT+AGG | + | chr4_2:45408276-45408295 | None:intergenic | 45.0% | |
| TTTGCTTCAGCTTCCATGGT+AGG | + | chr4_2:45408628-45408647 | None:intergenic | 45.0% | |
| !! | CCAAAGCTCTAGAAGGTTCA+TGG | + | chr4_2:45408712-45408731 | None:intergenic | 45.0% |
| !! | CCATGAACCTTCTAGAGCTT+TGG | - | chr4_2:45408709-45408728 | Msa0602120:CDS | 45.0% |
| !! | AGAGCTTTGGGAGATTTGAC+AGG | - | chr4_2:45408722-45408741 | Msa0602120:CDS | 45.0% |
| CAGATCCAATGACTCAGTAG+TGG | - | chr4_2:45408977-45408996 | Msa0602120:CDS | 45.0% | |
| TTTAATGGCGGTTGCAATCG+CGG | - | chr4_2:45409077-45409096 | Msa0602120:CDS | 45.0% | |
| CGAAAGTTGCTTAATGCTGC+TGG | + | chr4_2:45409407-45409426 | None:intergenic | 45.0% | |
| TGTTTGGATCACAACCACAG+TGG | - | chr4_2:45409597-45409616 | Msa0602120:intron | 45.0% | |
| !! | CCATGTAGCATTGGCAAAGA+TGG | + | chr4_2:45409644-45409663 | None:intergenic | 45.0% |
| CCATCTTTGCCAATGCTACA+TGG | - | chr4_2:45409641-45409660 | Msa0602120:intron | 45.0% | |
| AGCAATAGCAGCACCAATCT+TGG | - | chr4_2:45409959-45409978 | Msa0602120:CDS | 45.0% | |
| AATAGCAGCACCAATCTTGG+AGG | - | chr4_2:45409962-45409981 | Msa0602120:CDS | 45.0% | |
| !!! | GGAACATGTGGTTTTGTCTG+TGG | - | chr4_2:45410051-45410070 | Msa0602120:CDS | 45.0% |
| ! | ATGGTGCTGGAATTGGAATG+AGG | + | chr4_2:45408216-45408235 | None:intergenic | 45.0% |
| ! | TTGGATTAGGGTTTGGGTGT+TGG | + | chr4_2:45408263-45408282 | None:intergenic | 45.0% |
| GCTGGAACTGGATTTGGATT+AGG | + | chr4_2:45408276-45408295 | None:intergenic | 45.0% | |
| TTTGCTTCAGCTTCCATGGT+AGG | + | chr4_2:45408628-45408647 | None:intergenic | 45.0% | |
| !! | CCAAAGCTCTAGAAGGTTCA+TGG | + | chr4_2:45408712-45408731 | None:intergenic | 45.0% |
| !! | CCATGAACCTTCTAGAGCTT+TGG | - | chr4_2:45408709-45408728 | Msa0602120:CDS | 45.0% |
| !! | AGAGCTTTGGGAGATTTGAC+AGG | - | chr4_2:45408722-45408741 | Msa0602120:CDS | 45.0% |
| CAGATCCAATGACTCAGTAG+TGG | - | chr4_2:45408977-45408996 | Msa0602120:CDS | 45.0% | |
| TTTAATGGCGGTTGCAATCG+CGG | - | chr4_2:45409077-45409096 | Msa0602120:CDS | 45.0% | |
| CGAAAGTTGCTTAATGCTGC+TGG | + | chr4_2:45409407-45409426 | None:intergenic | 45.0% | |
| TGTTTGGATCACAACCACAG+TGG | - | chr4_2:45409597-45409616 | Msa0602120:intron | 45.0% | |
| !! | CCATGTAGCATTGGCAAAGA+TGG | + | chr4_2:45409644-45409663 | None:intergenic | 45.0% |
| CCATCTTTGCCAATGCTACA+TGG | - | chr4_2:45409641-45409660 | Msa0602120:intron | 45.0% | |
| AGCAATAGCAGCACCAATCT+TGG | - | chr4_2:45409959-45409978 | Msa0602120:CDS | 45.0% | |
| AATAGCAGCACCAATCTTGG+AGG | - | chr4_2:45409962-45409981 | Msa0602120:CDS | 45.0% | |
| !!! | GGAACATGTGGTTTTGTCTG+TGG | - | chr4_2:45410051-45410070 | Msa0602120:CDS | 45.0% |
| !! | ATTAAGTTAAATTAATTTAA+TGG | - | chr4_2:45409187-45409206 | Msa0602120:CDS | 5.0% |
| !! | ATTAAGTTAAATTAATTTAA+TGG | - | chr4_2:45409187-45409206 | Msa0602120:CDS | 5.0% |
| ! | AGCTCTCATGGTGCTGGAAT+TGG | + | chr4_2:45408223-45408242 | None:intergenic | 50.0% |
| AGAAACCTACCAGGAACACC+AGG | - | chr4_2:45408306-45408325 | Msa0602120:three_prime_UTR | 50.0% | |
| ATGAACTTGCCTGGTGTTCC+TGG | + | chr4_2:45408318-45408337 | None:intergenic | 50.0% | |
| TCCAGATCCGGAATCAGAAG+TGG | - | chr4_2:45408493-45408512 | Msa0602120:CDS | 50.0% | |
| ACCACTTCTGATTCCGGATC+TGG | + | chr4_2:45408497-45408516 | None:intergenic | 50.0% | |
| GCTGCAAATTCTGGTCTCTC+TGG | + | chr4_2:45408586-45408605 | None:intergenic | 50.0% | |
| GCCGATGAAGCTGCAAATTC+TGG | + | chr4_2:45408595-45408614 | None:intergenic | 50.0% | |
| AATTTGCAGCTTCATCGGCG+AGG | - | chr4_2:45408596-45408615 | Msa0602120:CDS | 50.0% | |
| GCTCTTTGCTTCAGCTTCCA+TGG | + | chr4_2:45408632-45408651 | None:intergenic | 50.0% | |
| TGGTGCACACAAGTCTTCTC+AGG | + | chr4_2:45408692-45408711 | None:intergenic | 50.0% | |
| ! | CGTGTTCTTGGTGACTGCAA+TGG | + | chr4_2:45408924-45408943 | None:intergenic | 50.0% |
| TGCAGTCACCAAGAACACGT+TGG | - | chr4_2:45408925-45408944 | Msa0602120:CDS | 50.0% | |
| TGCAGCCACTACTGAGTCAT+TGG | + | chr4_2:45408985-45409004 | None:intergenic | 50.0% | |
| AATCTCCAGAGCCAGTATGG+TGG | - | chr4_2:45410244-45410263 | Msa0602120:CDS | 50.0% | |
| AGTAGTGTCCACCACCATAC+TGG | + | chr4_2:45410258-45410277 | None:intergenic | 50.0% | |
| TTGTGGTTGCAATGCCGTTG+TGG | - | chr4_2:45410438-45410457 | Msa0602120:CDS | 50.0% | |
| ! | AGCTCTCATGGTGCTGGAAT+TGG | + | chr4_2:45408223-45408242 | None:intergenic | 50.0% |
| AGAAACCTACCAGGAACACC+AGG | - | chr4_2:45408306-45408325 | Msa0602120:three_prime_UTR | 50.0% | |
| ATGAACTTGCCTGGTGTTCC+TGG | + | chr4_2:45408318-45408337 | None:intergenic | 50.0% | |
| TCCAGATCCGGAATCAGAAG+TGG | - | chr4_2:45408493-45408512 | Msa0602120:CDS | 50.0% | |
| ACCACTTCTGATTCCGGATC+TGG | + | chr4_2:45408497-45408516 | None:intergenic | 50.0% | |
| GCTGCAAATTCTGGTCTCTC+TGG | + | chr4_2:45408586-45408605 | None:intergenic | 50.0% | |
| GCCGATGAAGCTGCAAATTC+TGG | + | chr4_2:45408595-45408614 | None:intergenic | 50.0% | |
| AATTTGCAGCTTCATCGGCG+AGG | - | chr4_2:45408596-45408615 | Msa0602120:CDS | 50.0% | |
| GCTCTTTGCTTCAGCTTCCA+TGG | + | chr4_2:45408632-45408651 | None:intergenic | 50.0% | |
| TGGTGCACACAAGTCTTCTC+AGG | + | chr4_2:45408692-45408711 | None:intergenic | 50.0% | |
| ! | CGTGTTCTTGGTGACTGCAA+TGG | + | chr4_2:45408924-45408943 | None:intergenic | 50.0% |
| TGCAGTCACCAAGAACACGT+TGG | - | chr4_2:45408925-45408944 | Msa0602120:CDS | 50.0% | |
| TGCAGCCACTACTGAGTCAT+TGG | + | chr4_2:45408985-45409004 | None:intergenic | 50.0% | |
| AATCTCCAGAGCCAGTATGG+TGG | - | chr4_2:45410244-45410263 | Msa0602120:CDS | 50.0% | |
| AGTAGTGTCCACCACCATAC+TGG | + | chr4_2:45410258-45410277 | None:intergenic | 50.0% | |
| TTGTGGTTGCAATGCCGTTG+TGG | - | chr4_2:45410438-45410457 | Msa0602120:CDS | 50.0% | |
| TGAGGAAGCTCTCATGGTGC+TGG | + | chr4_2:45408229-45408248 | None:intergenic | 55.0% | |
| ACTTGCCTGGTGTTCCTGGT+AGG | + | chr4_2:45408314-45408333 | None:intergenic | 55.0% | |
| AGCAGCACCAATCTTGGAGG+TGG | - | chr4_2:45409965-45409984 | Msa0602120:CDS | 55.0% | |
| GCAGCACCAATCTTGGAGGT+GGG | - | chr4_2:45409966-45409985 | Msa0602120:CDS | 55.0% | |
| TGAGGAAGCTCTCATGGTGC+TGG | + | chr4_2:45408229-45408248 | None:intergenic | 55.0% | |
| ACTTGCCTGGTGTTCCTGGT+AGG | + | chr4_2:45408314-45408333 | None:intergenic | 55.0% | |
| AGCAGCACCAATCTTGGAGG+TGG | - | chr4_2:45409965-45409984 | Msa0602120:CDS | 55.0% | |
| GCAGCACCAATCTTGGAGGT+GGG | - | chr4_2:45409966-45409985 | Msa0602120:CDS | 55.0% | |
| GGCGAGGACACAACCTACCA+TGG | - | chr4_2:45408612-45408631 | Msa0602120:CDS | 60.0% | |
| CTCCAGAGCCAGTATGGTGG+TGG | - | chr4_2:45410247-45410266 | Msa0602120:intron | 60.0% | |
| !! | GTCCACCACCATACTGGCTC+TGG | + | chr4_2:45410252-45410271 | None:intergenic | 60.0% |
| GGCGAGGACACAACCTACCA+TGG | - | chr4_2:45408612-45408631 | Msa0602120:CDS | 60.0% | |
| CTCCAGAGCCAGTATGGTGG+TGG | - | chr4_2:45410247-45410266 | Msa0602120:intron | 60.0% | |
| !! | GTCCACCACCATACTGGCTC+TGG | + | chr4_2:45410252-45410271 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 45408183 | 45410579 | 45408183 | ID=Msa0602120;Name=Msa0602120 |
| chr4_2 | mRNA | 45408183 | 45410579 | 45408183 | ID=Msa0602120-mRNA-1;Parent=Msa0602120;Name=Msa0602120-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0.33|1|1|1|3|297|498 |
| chr4_2 | exon | 45408183 | 45409431 | 45408183 | ID=Msa0602120-mRNA-1:exon:10185;Parent=Msa0602120-mRNA-1 |
| chr4_2 | exon | 45409865 | 45410264 | 45409865 | ID=Msa0602120-mRNA-1:exon:10184;Parent=Msa0602120-mRNA-1 |
| chr4_2 | exon | 45410435 | 45410579 | 45410435 | ID=Msa0602120-mRNA-1:exon:10183;Parent=Msa0602120-mRNA-1 |
| chr4_2 | CDS | 45410435 | 45410579 | 45410435 | ID=Msa0602120-mRNA-1:cds;Parent=Msa0602120-mRNA-1 |
| chr4_2 | CDS | 45409865 | 45410264 | 45409865 | ID=Msa0602120-mRNA-1:cds;Parent=Msa0602120-mRNA-1 |
| chr4_2 | CDS | 45408480 | 45409431 | 45408480 | ID=Msa0602120-mRNA-1:cds;Parent=Msa0602120-mRNA-1 |
| chr4_2 | three_prime_UTR | 45408183 | 45408479 | 45408183 | ID=Msa0602120-mRNA-1:three_prime_utr;Parent=Msa0602120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
