Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098740 | XP_003589004.1 | 86.179 | 246 | 22 | 2 | 56 | 289 | 19 | 264 | 2.45e-117 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098740 | G7I9Z4 | 86.179 | 246 | 22 | 2 | 56 | 289 | 19 | 264 | 1.17e-117 | 350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0098740 | 0.839098 | 1.941198e-57 | -8.615850e-47 |
| Msa0007850 | Msa0098740 | 0.839835 | 1.249498e-57 | -8.615850e-47 |
| Msa0008090 | Msa0098740 | 0.834386 | 3.088328e-56 | -8.615850e-47 |
| Msa0015680 | Msa0098740 | 0.813373 | 2.644910e-51 | -8.615850e-47 |
| Msa0029630 | Msa0098740 | 0.809583 | 1.760885e-50 | -8.615850e-47 |
| Msa0032260 | Msa0098740 | 0.811488 | 6.829427e-51 | -8.615850e-47 |
| Msa0033880 | Msa0098740 | 0.810726 | 9.988804e-51 | -8.615850e-47 |
| Msa0037160 | Msa0098740 | 0.800937 | 1.140175e-48 | -8.615850e-47 |
| Msa0038000 | Msa0098740 | 0.817899 | 2.595390e-52 | -8.615850e-47 |
| Msa0043860 | Msa0098740 | 0.810713 | 1.005446e-50 | -8.615850e-47 |
| Msa0047160 | Msa0098740 | 0.834835 | 2.381446e-56 | -8.615850e-47 |
| Msa0053240 | Msa0098740 | 0.921102 | 5.498671e-88 | -8.615850e-47 |
| Msa0055150 | Msa0098740 | 0.806440 | 8.218643e-50 | -8.615850e-47 |
| Msa0056030 | Msa0098740 | 0.817537 | 3.132517e-52 | -8.615850e-47 |
| Msa0056270 | Msa0098740 | 0.812509 | 4.091624e-51 | -8.615850e-47 |
| Msa0057710 | Msa0098740 | 0.813404 | 2.604245e-51 | -8.615850e-47 |
| Msa0061970 | Msa0098740 | 0.804462 | 2.135624e-49 | -8.615850e-47 |
| Msa0070430 | Msa0098740 | 0.802871 | 4.567547e-49 | -8.615850e-47 |
| Msa0073670 | Msa0098740 | 0.802739 | 4.862374e-49 | -8.615850e-47 |
| Msa0094470 | Msa0098740 | 0.829060 | 6.358650e-55 | -8.615850e-47 |
| Msa0097950 | Msa0098740 | 0.826547 | 2.554882e-54 | -8.615850e-47 |
| Msa0098740 | Msa0099190 | 0.808434 | 3.103860e-50 | -8.615850e-47 |
| Msa0098740 | Msa0101180 | 0.800675 | 1.289355e-48 | -8.615850e-47 |
| Msa0098740 | Msa0104610 | 0.814240 | 1.704198e-51 | -8.615850e-47 |
| Msa0098740 | Msa0108870 | 0.816893 | 4.373045e-52 | -8.615850e-47 |
| Msa0098740 | Msa0125450 | 0.811408 | 7.107505e-51 | -8.615850e-47 |
| Msa0098740 | Msa0125540 | 0.809675 | 1.683104e-50 | -8.615850e-47 |
| Msa0098740 | Msa0126770 | 0.808164 | 3.542923e-50 | -8.615850e-47 |
| Msa0098740 | Msa0126840 | 0.801440 | 8.994054e-49 | -8.615850e-47 |
| Msa0098740 | Msa0127310 | 0.802242 | 6.155549e-49 | -8.615850e-47 |
| Msa0098740 | Msa0127850 | 0.814226 | 1.715698e-51 | -8.615850e-47 |
| Msa0098740 | Msa0131590 | 0.813589 | 2.370938e-51 | -8.615850e-47 |
| Msa0098740 | Msa0136120 | 0.810954 | 8.913371e-51 | -8.615850e-47 |
| Msa0098740 | Msa0165950 | 0.816173 | 6.339862e-52 | -8.615850e-47 |
| Msa0098740 | Msa0166750 | 0.815651 | 8.288566e-52 | -8.615850e-47 |
| Msa0098740 | Msa0167480 | 0.805597 | 1.236082e-49 | -8.615850e-47 |
| Msa0098740 | Msa0169610 | 0.808784 | 2.612085e-50 | -8.615850e-47 |
| Msa0098740 | Msa0171850 | 0.815188 | 1.050619e-51 | -8.615850e-47 |
| Msa0098740 | Msa0174000 | 0.802525 | 5.383856e-49 | -8.615850e-47 |
| Msa0098740 | Msa0174770 | 0.801132 | 1.040206e-48 | -8.615850e-47 |
| Msa0098740 | Msa0177210 | 0.804663 | 1.938612e-49 | -8.615850e-47 |
| Msa0098740 | Msa0177230 | 0.820726 | 5.889760e-53 | -8.615850e-47 |
| Msa0098740 | Msa0180020 | 0.809522 | 1.815077e-50 | -8.615850e-47 |
| Msa0098740 | Msa0183460 | 0.803707 | 3.065178e-49 | -8.615850e-47 |
| Msa0098740 | Msa0198520 | 0.824601 | 7.390002e-54 | -8.615850e-47 |
| Msa0098740 | Msa0198530 | 0.833532 | 5.051803e-56 | -8.615850e-47 |
| Msa0098740 | Msa0221600 | 0.821824 | 3.287512e-53 | -8.615850e-47 |
| Msa0098740 | Msa0226470 | 0.801307 | 9.578457e-49 | -8.615850e-47 |
| Msa0098740 | Msa0227400 | 0.803921 | 2.766944e-49 | -8.615850e-47 |
| Msa0098740 | Msa0236270 | 0.808597 | 2.863863e-50 | -8.615850e-47 |
| Msa0098740 | Msa0239450 | 0.821288 | 4.373435e-53 | -8.615850e-47 |
| Msa0098740 | Msa0247060 | 0.806288 | 8.846878e-50 | -8.615850e-47 |
| Msa0098740 | Msa0265340 | 0.800104 | 1.685216e-48 | -8.615850e-47 |
| Msa0098740 | Msa0267870 | 0.831426 | 1.680825e-55 | -8.615850e-47 |
| Msa0098740 | Msa0271810 | 0.800315 | 1.526776e-48 | -8.615850e-47 |
| Msa0098740 | Msa0278790 | 0.819734 | 9.938843e-53 | -8.615850e-47 |
| Msa0098740 | Msa0280430 | 0.813001 | 3.192230e-51 | -8.615850e-47 |
| Msa0098740 | Msa0291520 | 0.837913 | 3.926462e-57 | -8.615850e-47 |
| Msa0098740 | Msa0295590 | 0.830708 | 2.522086e-55 | -8.615850e-47 |
| Msa0098740 | Msa0304590 | 0.813015 | 3.169982e-51 | -8.615850e-47 |
| Msa0098740 | Msa0304660 | 0.819979 | 8.737655e-53 | -8.615850e-47 |
| Msa0098740 | Msa0310410 | 0.820146 | 8.001972e-53 | -8.615850e-47 |
| Msa0098740 | Msa0315850 | 0.828498 | 8.697364e-55 | -8.615850e-47 |
| Msa0098740 | Msa0324240 | 0.806952 | 6.407292e-50 | -8.615850e-47 |
| Msa0098740 | Msa0331700 | 0.820470 | 6.742953e-53 | -8.615850e-47 |
| Msa0098740 | Msa0343190 | 0.805557 | 1.260386e-49 | -8.615850e-47 |
| Msa0098740 | Msa0363620 | 0.842485 | 2.513286e-58 | -8.615850e-47 |
| Msa0098740 | Msa0376280 | 0.801377 | 9.267959e-49 | -8.615850e-47 |
| Msa0098740 | Msa0376300 | 0.801928 | 7.142098e-49 | -8.615850e-47 |
| Msa0098740 | Msa0376690 | 0.823611 | 1.261578e-53 | -8.615850e-47 |
| Msa0098740 | Msa0384670 | 0.804179 | 2.445802e-49 | -8.615850e-47 |
| Msa0098740 | Msa0413730 | 0.803100 | 4.095883e-49 | -8.615850e-47 |
| Msa0098740 | Msa0416400 | 0.845080 | 5.076370e-59 | -8.615850e-47 |
| Msa0098740 | Msa0419520 | 0.863264 | 2.818335e-64 | -8.615850e-47 |
| Msa0098740 | Msa0434770 | 0.806578 | 7.686097e-50 | -8.615850e-47 |
| Msa0098740 | Msa0439890 | 0.814575 | 1.436510e-51 | -8.615850e-47 |
| Msa0098740 | Msa0443390 | 0.813209 | 2.873218e-51 | -8.615850e-47 |
| Msa0098740 | Msa0458060 | 0.827590 | 1.438357e-54 | -8.615850e-47 |
| Msa0098740 | Msa0458780 | 0.808326 | 3.272541e-50 | -8.615850e-47 |
| Msa0098740 | Msa0465550 | 0.840337 | 9.239157e-58 | -8.615850e-47 |
| Msa0098740 | Msa0471590 | 0.814590 | 1.425946e-51 | -8.615850e-47 |
| Msa0098740 | Msa0474700 | 0.828681 | 7.854373e-55 | -8.615850e-47 |
| Msa0098740 | Msa0478580 | 0.834330 | 3.190660e-56 | -8.615850e-47 |
| Msa0098740 | Msa0481480 | 0.803444 | 3.476811e-49 | -8.615850e-47 |
| Msa0098740 | Msa0484290 | 0.807471 | 4.974565e-50 | -8.615850e-47 |
| Msa0098740 | Msa0505380 | 0.820186 | 7.835149e-53 | -8.615850e-47 |
| Msa0098740 | Msa0511490 | 0.814775 | 1.297418e-51 | -8.615850e-47 |
| Msa0098740 | Msa0511770 | 0.801938 | 7.111092e-49 | -8.615850e-47 |
| Msa0098740 | Msa0534750 | 0.800142 | 1.655814e-48 | -8.615850e-47 |
| Msa0098740 | Msa0536790 | 0.812973 | 3.238153e-51 | -8.615850e-47 |
| Msa0098740 | Msa0545060 | 0.810913 | 9.100162e-51 | -8.615850e-47 |
| Msa0098740 | Msa0547990 | 0.806229 | 9.104577e-50 | -8.615850e-47 |
| Msa0098740 | Msa0550540 | 0.825039 | 5.824812e-54 | -8.615850e-47 |
| Msa0098740 | Msa0550570 | 0.844612 | 6.786892e-59 | -8.615850e-47 |
| Msa0098740 | Msa0552810 | 0.804661 | 1.940724e-49 | -8.615850e-47 |
| Msa0098740 | Msa0556790 | 0.803796 | 2.938676e-49 | -8.615850e-47 |
| Msa0098740 | Msa0561430 | 0.806413 | 8.326469e-50 | -8.615850e-47 |
| Msa0098740 | Msa0581070 | 0.811594 | 6.475882e-51 | -8.615850e-47 |
| Msa0098740 | Msa0581110 | 0.802725 | 4.895376e-49 | -8.615850e-47 |
| Msa0098740 | Msa0593700 | 0.818900 | 1.539432e-52 | -8.615850e-47 |
| Msa0098740 | Msa0594800 | 0.800238 | 1.582877e-48 | -8.615850e-47 |
| Msa0098740 | Msa0594910 | 0.806353 | 8.573219e-50 | -8.615850e-47 |
| Msa0098740 | Msa0600600 | 0.826252 | 3.004769e-54 | -8.615850e-47 |
| Msa0098740 | Msa0600610 | 0.818166 | 2.259213e-52 | -8.615850e-47 |
| Msa0098740 | Msa0603570 | 0.816555 | 5.207298e-52 | -8.615850e-47 |
| Msa0098740 | Msa0603670 | 0.804089 | 2.553841e-49 | -8.615850e-47 |
| Msa0098740 | Msa0609000 | 0.832010 | 1.206609e-55 | -8.615850e-47 |
| Msa0098740 | Msa0610390 | 0.812888 | 3.380082e-51 | -8.615850e-47 |
| Msa0098740 | Msa0616340 | 0.802666 | 5.033516e-49 | -8.615850e-47 |
| Msa0098740 | Msa0617580 | 0.822937 | 1.813080e-53 | -8.615850e-47 |
| Msa0098740 | Msa0618930 | 0.836575 | 8.633339e-57 | -8.615850e-47 |
| Msa0098740 | Msa0619920 | 0.824436 | 8.081386e-54 | -8.615850e-47 |
| Msa0098740 | Msa0620330 | 0.800690 | 1.280613e-48 | -8.615850e-47 |
| Msa0098740 | Msa0631250 | 0.801505 | 8.722963e-49 | -8.615850e-47 |
| Msa0098740 | Msa0633570 | 0.808067 | 3.715473e-50 | -8.615850e-47 |
| Msa0098740 | Msa0641140 | 0.842645 | 2.278894e-58 | -8.615850e-47 |
| Msa0098740 | Msa0650920 | 0.800210 | 1.603427e-48 | -8.615850e-47 |
| Msa0098740 | Msa0651150 | 0.817726 | 2.839846e-52 | -8.615850e-47 |
| Msa0098740 | Msa0652300 | 0.809044 | 2.297948e-50 | -8.615850e-47 |
| Msa0098740 | Msa0654870 | 0.826707 | 2.340562e-54 | -8.615850e-47 |
| Msa0098740 | Msa0659990 | 0.819047 | 1.425611e-52 | -8.615850e-47 |
| Msa0098740 | Msa0666230 | 0.815602 | 8.497279e-52 | -8.615850e-47 |
| Msa0098740 | Msa0679680 | 0.815666 | 8.225994e-52 | -8.615850e-47 |
| Msa0098740 | Msa0683780 | 0.833100 | 6.475407e-56 | -8.615850e-47 |
| Msa0098740 | Msa0687230 | 0.817169 | 3.790330e-52 | -8.615850e-47 |
| Msa0098740 | Msa0687630 | 0.833942 | 3.990186e-56 | -8.615850e-47 |
| Msa0098740 | Msa0689500 | 0.824221 | 9.077621e-54 | -8.615850e-47 |
| Msa0098740 | Msa0694840 | 0.819378 | 1.198736e-52 | -8.615850e-47 |
| Msa0098740 | Msa0694990 | 0.827433 | 1.568519e-54 | -8.615850e-47 |
| Msa0098740 | Msa0695130 | 0.801957 | 7.044884e-49 | -8.615850e-47 |
| Msa0098740 | Msa0699190 | 0.822930 | 1.820037e-53 | -8.615850e-47 |
| Msa0098740 | Msa0704660 | 0.825105 | 5.619047e-54 | -8.615850e-47 |
| Msa0098740 | Msa0704800 | 0.808306 | 3.304962e-50 | -8.615850e-47 |
| Msa0098740 | Msa0706390 | 0.832224 | 1.068141e-55 | -8.615850e-47 |
| Msa0098740 | Msa0707390 | 0.811443 | 6.983265e-51 | -8.615850e-47 |
| Msa0098740 | Msa0718740 | 0.808445 | 3.087094e-50 | -8.615850e-47 |
| Msa0098740 | Msa0724150 | 0.803206 | 3.893697e-49 | -8.615850e-47 |
| Msa0098740 | Msa0726080 | 0.808342 | 3.247230e-50 | -8.615850e-47 |
| Msa0098740 | Msa0734960 | 0.822642 | 2.123860e-53 | -8.615850e-47 |
| Msa0098740 | Msa0735310 | 0.818100 | 2.337453e-52 | -8.615850e-47 |
| Msa0098740 | Msa0744090 | 0.822463 | 2.336809e-53 | -8.615850e-47 |
| Msa0098740 | Msa0744100 | 0.824965 | 6.064948e-54 | -8.615850e-47 |
| Msa0098740 | Msa0750920 | 0.808339 | 3.251249e-50 | -8.615850e-47 |
| Msa0098740 | Msa0756930 | 0.805856 | 1.090671e-49 | -8.615850e-47 |
| Msa0098740 | Msa0774750 | 0.815454 | 9.168404e-52 | -8.615850e-47 |
| Msa0098740 | Msa0780880 | 0.800672 | 1.291245e-48 | -8.615850e-47 |
| Msa0098740 | Msa0781270 | 0.832441 | 9.435431e-56 | -8.615850e-47 |
| Msa0098740 | Msa0786270 | 0.807460 | 5.000647e-50 | -8.615850e-47 |
| Msa0098740 | Msa0788120 | 0.804521 | 2.075785e-49 | -8.615850e-47 |
| Msa0098740 | Msa0795660 | 0.834408 | 3.050394e-56 | -8.615850e-47 |
| Msa0098740 | Msa0796440 | 0.806304 | 8.779563e-50 | -8.615850e-47 |
| Msa0098740 | Msa0797750 | 0.813567 | 2.398322e-51 | -8.615850e-47 |
| Msa0098740 | Msa0803010 | 0.808248 | 3.399240e-50 | -8.615850e-47 |
| Msa0098740 | Msa0805500 | 0.800172 | 1.632347e-48 | -8.615850e-47 |
| Msa0098740 | Msa0814250 | 0.825194 | 5.354800e-54 | -8.615850e-47 |
| Msa0098740 | Msa0814320 | 0.809143 | 2.188632e-50 | -8.615850e-47 |
| Msa0098740 | Msa0818770 | 0.823694 | 1.206707e-53 | -8.615850e-47 |
| Msa0098740 | Msa0819060 | 0.809084 | 2.252969e-50 | -8.615850e-47 |
| Msa0098740 | Msa0822170 | 0.817333 | 3.482125e-52 | -8.615850e-47 |
| Msa0098740 | Msa0822180 | 0.806188 | 9.287097e-50 | -8.615850e-47 |
| Msa0098740 | Msa0823090 | 0.862174 | 6.108601e-64 | -8.615850e-47 |
| Msa0098740 | Msa0824640 | 0.832618 | 8.531776e-56 | -8.615850e-47 |
| Msa0098740 | Msa0825270 | 0.832255 | 1.049525e-55 | -8.615850e-47 |
| Msa0098740 | Msa0825280 | 0.822621 | 2.147953e-53 | -8.615850e-47 |
| Msa0098740 | Msa0836500 | 0.809994 | 1.436897e-50 | -8.615850e-47 |
| Msa0098740 | Msa0839200 | 0.828451 | 8.927744e-55 | -8.615850e-47 |
| Msa0098740 | Msa0849200 | 0.816793 | 4.605228e-52 | -8.615850e-47 |
| Msa0098740 | Msa0851470 | 0.815381 | 9.516408e-52 | -8.615850e-47 |
| Msa0098740 | Msa0853120 | 0.814655 | 1.379569e-51 | -8.615850e-47 |
| Msa0098740 | Msa0858440 | 0.816706 | 4.815050e-52 | -8.615850e-47 |
| Msa0098740 | Msa0864010 | 0.826097 | 3.270994e-54 | -8.615850e-47 |
| Msa0098740 | Msa0864420 | 0.807850 | 4.131468e-50 | -8.615850e-47 |
| Msa0098740 | Msa0888940 | 0.805132 | 1.546821e-49 | -8.615850e-47 |
| Msa0098740 | Msa0897400 | 0.801362 | 9.331477e-49 | -8.615850e-47 |
| Msa0098740 | Msa0901450 | 0.804906 | 1.725106e-49 | -8.615850e-47 |
| Msa0098740 | Msa0913240 | 0.808443 | 3.089489e-50 | -8.615850e-47 |
| Msa0098740 | Msa0943170 | 0.834860 | 2.347000e-56 | -8.615850e-47 |
| Msa0098740 | Msa0960830 | 0.827122 | 1.862169e-54 | -8.615850e-47 |
| Msa0098740 | Msa0963020 | 0.849399 | 3.316117e-60 | -8.615850e-47 |
| Msa0098740 | Msa0966270 | 0.835221 | 1.904164e-56 | -8.615850e-47 |
| Msa0098740 | Msa0973320 | 0.808395 | 3.162984e-50 | -8.615850e-47 |
| Msa0098740 | Msa0980940 | 0.824105 | 9.667923e-54 | -8.615850e-47 |
| Msa0098740 | Msa0981430 | 0.828406 | 9.150189e-55 | -8.615850e-47 |
| Msa0098740 | Msa0990590 | 0.818262 | 2.148974e-52 | -8.615850e-47 |
| Msa0098740 | Msa0994290 | 0.803540 | 3.320629e-49 | -8.615850e-47 |
| Msa0098740 | Msa1001350 | 0.812447 | 4.221022e-51 | -8.615850e-47 |
| Msa0098740 | Msa1014420 | 0.807645 | 4.567986e-50 | -8.615850e-47 |
| Msa0098740 | Msa1017510 | 0.810713 | 1.005352e-50 | -8.615850e-47 |
| Msa0098740 | Msa1019240 | 0.829177 | 5.955956e-55 | -8.615850e-47 |
| Msa0098740 | Msa1019260 | 0.816475 | 5.426539e-52 | -8.615850e-47 |
| Msa0098740 | Msa1025940 | 0.873553 | 1.344880e-67 | -8.615850e-47 |
| Msa0098740 | Msa1030930 | 0.814760 | 1.307471e-51 | -8.615850e-47 |
| Msa0098740 | Msa1041520 | 0.826468 | 2.667777e-54 | -8.615850e-47 |
| Msa0098740 | Msa1051330 | 0.813577 | 2.386100e-51 | -8.615850e-47 |
| Msa0098740 | Msa1055410 | 0.808198 | 3.484947e-50 | -8.615850e-47 |
| Msa0098740 | Msa1070050 | 0.812299 | 4.546917e-51 | -8.615850e-47 |
| Msa0098740 | Msa1070390 | 0.800357 | 1.497316e-48 | -8.615850e-47 |
| Msa0098740 | Msa1071660 | 0.809615 | 1.733876e-50 | -8.615850e-47 |
| Msa0098740 | Msa1073400 | 0.810753 | 9.855003e-51 | -8.615850e-47 |
| Msa0098740 | Msa1081150 | 0.800360 | 1.494842e-48 | -8.615850e-47 |
| Msa0098740 | Msa1081560 | 0.827383 | 1.612605e-54 | -8.615850e-47 |
| Msa0098740 | Msa1083880 | 0.816196 | 6.264296e-52 | -8.615850e-47 |
| Msa0098740 | Msa1093330 | 0.838465 | 2.830197e-57 | -8.615850e-47 |
| Msa0098740 | Msa1104140 | 0.806270 | 8.922877e-50 | -8.615850e-47 |
| Msa0098740 | Msa1104210 | 0.822293 | 2.560088e-53 | -8.615850e-47 |
| Msa0098740 | Msa1122820 | 0.805403 | 1.357868e-49 | -8.615850e-47 |
| Msa0098740 | Msa1125550 | 0.803542 | 3.317286e-49 | -8.615850e-47 |
| Msa0098740 | Msa1126770 | 0.805118 | 1.557464e-49 | -8.615850e-47 |
| Msa0098740 | Msa1126830 | 0.808029 | 3.786094e-50 | -8.615850e-47 |
| Msa0098740 | Msa1126850 | 0.805078 | 1.588016e-49 | -8.615850e-47 |
| Msa0098740 | Msa1127130 | 0.812217 | 4.738639e-51 | -8.615850e-47 |
| Msa0098740 | Msa1127890 | 0.802289 | 6.020863e-49 | -8.615850e-47 |
| Msa0098740 | Msa1131560 | 0.823491 | 1.346483e-53 | -8.615850e-47 |
| Msa0098740 | Msa1135800 | -0.829496 | 4.984119e-55 | -8.615850e-47 |
| Msa0098740 | Msa1135810 | -0.826202 | 3.087231e-54 | -8.615850e-47 |
| Msa0098740 | Msa1158770 | 0.815066 | 1.118288e-51 | -8.615850e-47 |
| Msa0098740 | Msa1165780 | 0.812682 | 3.749923e-51 | -8.615850e-47 |
| Msa0098740 | Msa1165870 | 0.820756 | 5.796352e-53 | -8.615850e-47 |
| Msa0098740 | Msa1166410 | 0.824998 | 5.956617e-54 | -8.615850e-47 |
| Msa0098740 | Msa1166870 | 0.831542 | 1.573583e-55 | -8.615850e-47 |
| Msa0098740 | Msa1171830 | 0.817793 | 2.743036e-52 | -8.615850e-47 |
| Msa0098740 | Msa1174100 | 0.821607 | 3.690016e-53 | -8.615850e-47 |
| Msa0098740 | Msa1176980 | 0.823002 | 1.750491e-53 | -8.615850e-47 |
| Msa0098740 | Msa1179950 | 0.866091 | 3.672825e-65 | -8.615850e-47 |
| Msa0098740 | Msa1179980 | 0.870268 | 1.658832e-66 | -8.615850e-47 |
| Msa0098740 | Msa1184370 | 0.866917 | 2.007935e-65 | -8.615850e-47 |
| Msa0098740 | Msa1188560 | 0.801095 | 1.058565e-48 | -8.615850e-47 |
| Msa0098740 | Msa1192850 | 0.803201 | 3.902559e-49 | -8.615850e-47 |
| Msa0098740 | Msa1201830 | 0.830034 | 3.686483e-55 | -8.615850e-47 |
| Msa0098740 | Msa1206650 | 0.806556 | 7.768858e-50 | -8.615850e-47 |
| Msa0098740 | Msa1208020 | 0.812073 | 5.092952e-51 | -8.615850e-47 |
| Msa0098740 | Msa1211830 | 0.806559 | 7.756981e-50 | -8.615850e-47 |
| Msa0098740 | Msa1226610 | 0.831937 | 1.257365e-55 | -8.615850e-47 |
| Msa0098740 | Msa1227690 | 0.862115 | 6.369460e-64 | -8.615850e-47 |
| Msa0098740 | Msa1254710 | 0.820628 | 6.204816e-53 | -8.615850e-47 |
| Msa0098740 | Msa1256770 | 0.816363 | 5.748162e-52 | -8.615850e-47 |
| Msa0098740 | Msa1265630 | 0.833839 | 4.233971e-56 | -8.615850e-47 |
| Msa0098740 | Msa1270620 | 0.872126 | 4.041476e-67 | -8.615850e-47 |
| Msa0098740 | Msa1270690 | 0.873776 | 1.131625e-67 | -8.615850e-47 |
| Msa0098740 | Msa1278900 | 0.818746 | 1.668804e-52 | -8.615850e-47 |
| Msa0098740 | Msa1290450 | 0.801281 | 9.695777e-49 | -8.615850e-47 |
| Msa0098740 | Msa1294840 | 0.833168 | 6.227101e-56 | -8.615850e-47 |
| Msa0098740 | Msa1295110 | 0.812716 | 3.686277e-51 | -8.615850e-47 |
| Msa0098740 | Msa1298020 | 0.800911 | 1.153901e-48 | -8.615850e-47 |
| Msa0098740 | Msa1299700 | 0.822715 | 2.041966e-53 | -8.615850e-47 |
| Msa0098740 | Msa1306990 | 0.868675 | 5.472962e-66 | -8.615850e-47 |
| Msa0098740 | Msa1307950 | 0.823892 | 1.084603e-53 | -8.615850e-47 |
| Msa0098740 | Msa1310690 | 0.808721 | 2.695151e-50 | -8.615850e-47 |
| Msa0098740 | Msa1331250 | 0.835282 | 1.837142e-56 | -8.615850e-47 |
| Msa0098740 | Msa1331710 | 0.813190 | 2.901663e-51 | -8.615850e-47 |
| Msa0098740 | Msa1332220 | 0.830576 | 2.717175e-55 | -8.615850e-47 |
| Msa0098740 | Msa1335940 | 0.805108 | 1.565211e-49 | -8.615850e-47 |
| Msa0098740 | Msa1340830 | 0.804649 | 1.952152e-49 | -8.615850e-47 |
| Msa0098740 | Msa1343290 | 0.830309 | 3.158470e-55 | -8.615850e-47 |
| Msa0098740 | Msa1344850 | 0.818153 | 2.274477e-52 | -8.615850e-47 |
| Msa0098740 | Msa1345450 | 0.822002 | 2.989833e-53 | -8.615850e-47 |
| Msa0098740 | Msa1355700 | 0.812429 | 4.258125e-51 | -8.615850e-47 |
| Msa0098740 | Msa1363860 | 0.815674 | 8.190085e-52 | -8.615850e-47 |
| Msa0098740 | Msa1369170 | 0.804945 | 1.693138e-49 | -8.615850e-47 |
| Msa0098740 | Msa1369190 | 0.810881 | 9.246869e-51 | -8.615850e-47 |
| Msa0098740 | Msa1372310 | 0.814706 | 1.343716e-51 | -8.615850e-47 |
| Msa0098740 | Msa1388860 | 0.806990 | 6.288524e-50 | -8.615850e-47 |
| Msa0098740 | Msa1389680 | 0.971860 | 7.819610e-134 | -8.615850e-47 |
| Msa0098740 | Msa1394290 | 0.807068 | 6.053916e-50 | -8.615850e-47 |
| Msa0098740 | Msa1397940 | 0.817943 | 2.536615e-52 | -8.615850e-47 |
| Msa0098740 | Msa1404190 | 0.818693 | 1.715589e-52 | -8.615850e-47 |
| Msa0098740 | Msa1432480 | 0.802505 | 5.433976e-49 | -8.615850e-47 |
| Msa0098740 | Msa1433600 | 0.811020 | 8.626923e-51 | -8.615850e-47 |
| Msa0098740 | Msa1435770 | 0.825273 | 5.127617e-54 | -8.615850e-47 |
| Msa0098740 | Msa1438640 | 0.830670 | 2.577285e-55 | -8.615850e-47 |
| Msa0098740 | Msa1442850 | 0.832616 | 8.539757e-56 | -8.615850e-47 |
| Msa0098740 | Msa1450280 | 0.804103 | 2.536729e-49 | -8.615850e-47 |
| Msa0098740 | Msa1459960 | 0.831254 | 1.852139e-55 | -8.615850e-47 |
| Msa0098740 | Msa1462470 | 0.809224 | 2.102598e-50 | -8.615850e-47 |
| Msa0098740 | Msa1462860 | 0.812925 | 3.317381e-51 | -8.615850e-47 |
| Msa0098740 | Msa1465080 | 0.827187 | 1.796767e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098740 | MtrunA17_Chr1g0151511 | 86.179 | 246 | 22 | 2 | 56 | 289 | 19 | 264 | 2.26e-121 | 350 |
| Msa0098740 | MtrunA17_Chr8g0377581 | 44.167 | 240 | 88 | 7 | 56 | 286 | 18 | 220 | 7.04e-38 | 135 |
| Msa0098740 | MtrunA17_Chr1g0151501 | 87.500 | 32 | 4 | 0 | 294 | 325 | 900 | 931 | 5.36e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0098740 | AT4G33010.2 | 84.848 | 33 | 5 | 0 | 293 | 325 | 882 | 914 | 5.53e-12 | 67.4 |
| Msa0098740 | AT4G33010.1 | 84.848 | 33 | 5 | 0 | 293 | 325 | 882 | 914 | 1.87e-11 | 65.5 |
| Msa0098740 | AT2G26080.1 | 84.848 | 33 | 5 | 0 | 293 | 325 | 888 | 920 | 2.09e-11 | 65.5 |
Find 82 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGACTTAAGAGGCTTTA+AGG | 0.132028 | 1_3:-4754503 | Msa0098740:intron |
| GAAGAGTTTGCCGGCGGTTC+TGG | 0.227820 | 1_3:+4756133 | None:intergenic |
| GTGAAATTTCTTATGGATAA+TGG | 0.256008 | 1_3:-4754353 | Msa0098740:CDS |
| GGAAAGAAGAAACTAGAATT+TGG | 0.282317 | 1_3:-4755638 | Msa0098740:CDS |
| AGATGTTGTGAAATTTCTTA+TGG | 0.294776 | 1_3:-4754360 | Msa0098740:CDS |
| AACCGCCGGCAAACTCTTCC+AGG | 0.307525 | 1_3:-4756129 | Msa0098740:intron |
| AAGAAGGAGAAGAGTGTAGA+AGG | 0.312453 | 1_3:-4755524 | Msa0098740:CDS |
| AGAAATTTCACAACATCTTC+AGG | 0.317095 | 1_3:+4754365 | None:intergenic |
| CCGCCGGACTTGGTAGTTAC+AGG | 0.340301 | 1_3:-4756170 | Msa0098740:CDS |
| AAGAAGAATGGAAGTGAGTT+AGG | 0.374907 | 1_3:-4755605 | Msa0098740:CDS |
| TGAAAAGGAGAAGAATTTAG+AGG | 0.379641 | 1_3:-4755417 | Msa0098740:intron |
| GAATTCATTGTTGACTTAAG+AGG | 0.383562 | 1_3:-4754511 | Msa0098740:CDS |
| GCAGTCGCACCGAGCTCAAT+TGG | 0.383904 | 1_3:-4756203 | Msa0098740:CDS |
| GTTGTCAGCAGAGACAAATT+TGG | 0.400587 | 1_3:+4755895 | None:intergenic |
| ATTCTCGGGATGTAGAAATT+AGG | 0.415570 | 1_3:-4755307 | Msa0098740:CDS |
| CCGGAAAACGCCGCCGGACT+TGG | 0.419030 | 1_3:-4756180 | Msa0098740:CDS |
| AGAAGGAGAAGAGTGTAGAA+GGG | 0.423276 | 1_3:-4755523 | Msa0098740:CDS |
| TTTGCCGGCGGTTCTGGCGG+TGG | 0.425742 | 1_3:+4756139 | None:intergenic |
| GAGCTCGGTGCGACTGCAGC+TGG | 0.432099 | 1_3:+4756209 | None:intergenic |
| GAAGACACGGAAGAGAGATC+TGG | 0.440783 | 1_3:-4755200 | Msa0098740:CDS |
| GTGGAGGGCTAGTTGATTCT+CGG | 0.450550 | 1_3:-4755322 | Msa0098740:CDS |
| TTAAACCGGCGCAGTCTCAT+AGG | 0.455996 | 1_3:-4755793 | Msa0098740:CDS |
| TGAGCTTAATCAACTTCATA+AGG | 0.457180 | 1_3:-4755819 | Msa0098740:CDS |
| TTTCCAATGTAGAATACTGC+TGG | 0.457929 | 1_3:-4754395 | Msa0098740:intron |
| ATGTGAAGGTTGAAAGTAAA+GGG | 0.462456 | 1_3:-4755496 | Msa0098740:CDS |
| GGAGAGAGTGTAAAGAAGAA+TGG | 0.469789 | 1_3:-4755617 | Msa0098740:CDS |
| CTCCTCAGGAGTTAGAAATT+AGG | 0.475036 | 1_3:-4755466 | Msa0098740:CDS |
| AAATGAAGTGGGGAGTGAAA+AGG | 0.480460 | 1_3:-4755432 | Msa0098740:CDS |
| AACAGATGATAGTGGTAGAT+TGG | 0.498404 | 1_3:-4755750 | Msa0098740:CDS |
| TGGAGGGCTAGTTGATTCTC+GGG | 0.502825 | 1_3:-4755321 | Msa0098740:CDS |
| AAGACACGGAAGAGAGATCT+GGG | 0.505868 | 1_3:-4755199 | Msa0098740:CDS |
| ACTTCATAAGGAGCTTAAAC+CGG | 0.507615 | 1_3:-4755807 | Msa0098740:CDS |
| GAATGGAAGTGAGTTAGGTC+AGG | 0.510402 | 1_3:-4755600 | Msa0098740:CDS |
| GAAAACCTGGAAGAGTTTGC+CGG | 0.511563 | 1_3:+4756124 | None:intergenic |
| GAAGTTGTTGGTTCTGTCGT+GGG | 0.512214 | 1_3:-4755689 | Msa0098740:CDS |
| GAAGGAGAAGAGTGTAGAAG+GGG | 0.517307 | 1_3:-4755522 | Msa0098740:CDS |
| CTCCCTGTAACTACCAAGTC+CGG | 0.517943 | 1_3:+4756167 | None:intergenic |
| CGAGAAGAAGAACAAGAAGA+AGG | 0.521154 | 1_3:-4755540 | Msa0098740:CDS |
| AATTCCACCGCCAGAACCGC+CGG | 0.521284 | 1_3:-4756143 | Msa0098740:CDS |
| TAAAGGGATAGTTCCTCCTC+AGG | 0.521560 | 1_3:-4755480 | Msa0098740:CDS |
| GAGTTTGCCGGCGGTTCTGG+CGG | 0.531512 | 1_3:+4756136 | None:intergenic |
| AATTGGCCGGAAAACGCCGC+CGG | 0.533188 | 1_3:-4756186 | Msa0098740:CDS |
| TGAAGTTGTTGGTTCTGTCG+TGG | 0.542751 | 1_3:-4755690 | Msa0098740:CDS |
| AATGTGAAGGTTGAAAGTAA+AGG | 0.544852 | 1_3:-4755497 | Msa0098740:CDS |
| AGACGGAGCAAAGGAAGAAG+AGG | 0.546821 | 1_3:-4755229 | Msa0098740:CDS |
| CATTGAAAGCCGTGGATGCA+CGG | 0.548708 | 1_3:+4755840 | None:intergenic |
| AAGAGGGAAAGACGGAGCAA+AGG | 0.550638 | 1_3:-4755238 | Msa0098740:CDS |
| AAACCTGGTCGTGAAGTTGT+TGG | 0.551304 | 1_3:-4755701 | Msa0098740:CDS |
| TCGCACCGAGCTCAATTGGC+CGG | 0.564441 | 1_3:-4756199 | Msa0098740:CDS |
| GAGTTAGGTCAGGACGATGA+AGG | 0.567638 | 1_3:-4755590 | Msa0098740:CDS |
| GAGTAAATTACATGCTGAAG+AGG | 0.574245 | 1_3:-4755255 | Msa0098740:CDS |
| AATGGTGTGAAGAGTGAAAG+TGG | 0.576054 | 1_3:-4755341 | Msa0098740:CDS |
| GGGACGAGAACAACAGAAAG+AGG | 0.576625 | 1_3:-4755381 | Msa0098740:CDS |
| TTCCAATGTAGAATACTGCT+GGG | 0.577015 | 1_3:-4754394 | Msa0098740:intron |
| TGTAGAAGGGGAGAATGTGA+AGG | 0.579317 | 1_3:-4755510 | Msa0098740:CDS |
| GATTGGTCGAAAGTACTGTT+CGG | 0.581744 | 1_3:-4755733 | Msa0098740:CDS |
| TACCACTATCATCTGTTGCA+TGG | 0.584555 | 1_3:+4755756 | None:intergenic |
| AGCCATGCAACAGATGATAG+TGG | 0.587057 | 1_3:-4755758 | Msa0098740:CDS |
| ATTAAGCTCATTGAAAGCCG+TGG | 0.591302 | 1_3:+4755832 | None:intergenic |
| GACGATGAAGGAAGAACGGA+GGG | 0.595325 | 1_3:-4755578 | Msa0098740:CDS |
| TTATCTGCTCCGTGCATCCA+CGG | 0.595538 | 1_3:-4755849 | Msa0098740:CDS |
| AGTAAATTACATGCTGAAGA+GGG | 0.598011 | 1_3:-4755254 | Msa0098740:CDS |
| CTGGTTTCTGATGCAAACGA+GGG | 0.598123 | 1_3:+4756228 | None:intergenic |
| GACCTAATTTCTAACTCCTG+AGG | 0.598620 | 1_3:+4755464 | None:intergenic |
| CGCCGGACTTGGTAGTTACA+GGG | 0.601379 | 1_3:-4756169 | Msa0098740:CDS |
| GAACCAACAACTTCACGACC+AGG | 0.602335 | 1_3:+4755698 | None:intergenic |
| GCTGGTTTCTGATGCAAACG+AGG | 0.604991 | 1_3:+4756227 | None:intergenic |
| GTTCGGAGTGATGTTAAACC+TGG | 0.607851 | 1_3:-4755716 | Msa0098740:CDS |
| GTTGTTGGTTCTGTCGTGGG+TGG | 0.608189 | 1_3:-4755686 | Msa0098740:CDS |
| ACGAGAACAACAGAAAGAGG+TGG | 0.612657 | 1_3:-4755378 | Msa0098740:CDS |
| TCAGGACGATGAAGGAAGAA+CGG | 0.621358 | 1_3:-4755582 | Msa0098740:CDS |
| ACATGCTGAAGAGGGAAAGA+CGG | 0.635975 | 1_3:-4755246 | Msa0098740:CDS |
| TTCTTCCTATGAGACTGCGC+CGG | 0.636496 | 1_3:+4755788 | None:intergenic |
| GAAGAGGAAGAATGAAGACA+CGG | 0.643138 | 1_3:-4755213 | Msa0098740:CDS |
| AAATTTGTCTCTGCTGACAA+CGG | 0.644626 | 1_3:-4755893 | Msa0098740:CDS |
| CTAATTTCTAACTCCTGAGG+AGG | 0.647828 | 1_3:+4755467 | None:intergenic |
| GTGTGAAGAGTGAAAGTGGA+GGG | 0.650346 | 1_3:-4755337 | Msa0098740:CDS |
| GGACGATGAAGGAAGAACGG+AGG | 0.651421 | 1_3:-4755579 | Msa0098740:CDS |
| AACCTGGAAGAGTTTGCCGG+CGG | 0.693894 | 1_3:+4756127 | None:intergenic |
| AGACACGGAAGAGAGATCTG+GGG | 0.742079 | 1_3:-4755198 | Msa0098740:CDS |
| CCTGTAACTACCAAGTCCGG+CGG | 0.742344 | 1_3:+4756170 | None:intergenic |
| GGTGTGAAGAGTGAAAGTGG+AGG | 0.804724 | 1_3:-4755338 | Msa0098740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGAAAACGATTA+CGG | - | chr1_3:4754644-4754663 | Msa0098740:intron | 20.0% |
| !!! | AATCTTTTTCAATTTTGATC+AGG | - | chr1_3:4755568-4755587 | Msa0098740:CDS | 20.0% |
| !! | TGACAAAAATAATGTAATAG+AGG | + | chr1_3:4755676-4755695 | None:intergenic | 20.0% |
| !!! | TACATTATTTTTGTCATACT+AGG | - | chr1_3:4755680-4755699 | Msa0098740:intron | 20.0% |
| !!! | ACATTATTTTTGTCATACTA+GGG | - | chr1_3:4755681-4755700 | Msa0098740:intron | 20.0% |
| !! | CATTCACAAAAACAAAATAT+AGG | + | chr1_3:4755864-4755883 | None:intergenic | 20.0% |
| !! | AAGAAAAATGAAAACGATTA+CGG | - | chr1_3:4754644-4754663 | Msa0098740:intron | 20.0% |
| !!! | AATCTTTTTCAATTTTGATC+AGG | - | chr1_3:4755568-4755587 | Msa0098740:CDS | 20.0% |
| !! | TGACAAAAATAATGTAATAG+AGG | + | chr1_3:4755676-4755695 | None:intergenic | 20.0% |
| !!! | TACATTATTTTTGTCATACT+AGG | - | chr1_3:4755680-4755699 | Msa0098740:intron | 20.0% |
| !!! | ACATTATTTTTGTCATACTA+GGG | - | chr1_3:4755681-4755700 | Msa0098740:intron | 20.0% |
| !! | CATTCACAAAAACAAAATAT+AGG | + | chr1_3:4755864-4755883 | None:intergenic | 20.0% |
| ! | AGAAAAATGAAAACGATTAC+GGG | - | chr1_3:4754645-4754664 | Msa0098740:intron | 25.0% |
| ! | AGTCTAAGAAGAAAATGAAA+AGG | - | chr1_3:4755444-4755463 | Msa0098740:CDS | 25.0% |
| ! | AAACAACTTCAATCATCAAA+TGG | + | chr1_3:4756144-4756163 | None:intergenic | 25.0% |
| ! | AGATGTTGTGAAATTTCTTA+TGG | - | chr1_3:4756256-4756275 | Msa0098740:CDS | 25.0% |
| ! | GTGAAATTTCTTATGGATAA+TGG | - | chr1_3:4756263-4756282 | Msa0098740:CDS | 25.0% |
| ! | AGAAAAATGAAAACGATTAC+GGG | - | chr1_3:4754645-4754664 | Msa0098740:intron | 25.0% |
| ! | AGTCTAAGAAGAAAATGAAA+AGG | - | chr1_3:4755444-4755463 | Msa0098740:CDS | 25.0% |
| ! | AAACAACTTCAATCATCAAA+TGG | + | chr1_3:4756144-4756163 | None:intergenic | 25.0% |
| ! | AGATGTTGTGAAATTTCTTA+TGG | - | chr1_3:4756256-4756275 | Msa0098740:CDS | 25.0% |
| ! | GTGAAATTTCTTATGGATAA+TGG | - | chr1_3:4756263-4756282 | Msa0098740:CDS | 25.0% |
| GAAATGAGAAAAGGAGAAAA+AGG | + | chr1_3:4754517-4754536 | None:intergenic | 30.0% | |
| TGGATATAGGAAATGAGAAA+AGG | + | chr1_3:4754526-4754545 | None:intergenic | 30.0% | |
| AAACGCGATTATATGGATAT+AGG | + | chr1_3:4754539-4754558 | None:intergenic | 30.0% | |
| !!! | TTTTCTGAAACGCGATTATA+TGG | + | chr1_3:4754546-4754565 | None:intergenic | 30.0% |
| AGCTATATATGTATGTGTGA+AGG | - | chr1_3:4754604-4754623 | Msa0098740:intron | 30.0% | |
| !! | TCATTTTTCTTCTGCTTTCA+CGG | + | chr1_3:4754635-4754654 | None:intergenic | 30.0% |
| TGAGCTTAATCAACTTCATA+AGG | - | chr1_3:4754797-4754816 | Msa0098740:intron | 30.0% | |
| GGAAAGAAGAAACTAGAATT+TGG | - | chr1_3:4754978-4754997 | Msa0098740:intron | 30.0% | |
| AATGTGAAGGTTGAAAGTAA+AGG | - | chr1_3:4755119-4755138 | Msa0098740:intron | 30.0% | |
| ATGTGAAGGTTGAAAGTAAA+GGG | - | chr1_3:4755120-4755139 | Msa0098740:intron | 30.0% | |
| TCGAAAAAGAGAAATGAAGT+GGG | - | chr1_3:4755173-4755192 | Msa0098740:intron | 30.0% | |
| TGAAAAGGAGAAGAATTTAG+AGG | - | chr1_3:4755199-4755218 | Msa0098740:CDS | 30.0% | |
| AGTAAATTACATGCTGAAGA+GGG | - | chr1_3:4755362-4755381 | Msa0098740:CDS | 30.0% | |
| AAAATGAAAAGGAAACACGA+GGG | - | chr1_3:4755455-4755474 | Msa0098740:CDS | 30.0% | |
| GTACTATCATAGAACATATG+AGG | - | chr1_3:4755634-4755653 | Msa0098740:CDS | 30.0% | |
| ! | TGATAGCTGTTAAATCGTTT+TGG | - | chr1_3:4755739-4755758 | Msa0098740:CDS | 30.0% |
| ! | ATGACAGATTTTCACTTGTA+AGG | - | chr1_3:4755768-4755787 | Msa0098740:CDS | 30.0% |
| TAAAGTATGAGTGAAAACCA+AGG | + | chr1_3:4756022-4756041 | None:intergenic | 30.0% | |
| !! | GAATTCATTGTTGACTTAAG+AGG | - | chr1_3:4756105-4756124 | Msa0098740:intron | 30.0% |
| AGAAATTTCACAACATCTTC+AGG | + | chr1_3:4756254-4756273 | None:intergenic | 30.0% | |
| GAAATGAGAAAAGGAGAAAA+AGG | + | chr1_3:4754517-4754536 | None:intergenic | 30.0% | |
| TGGATATAGGAAATGAGAAA+AGG | + | chr1_3:4754526-4754545 | None:intergenic | 30.0% | |
| AAACGCGATTATATGGATAT+AGG | + | chr1_3:4754539-4754558 | None:intergenic | 30.0% | |
| !!! | TTTTCTGAAACGCGATTATA+TGG | + | chr1_3:4754546-4754565 | None:intergenic | 30.0% |
| AGCTATATATGTATGTGTGA+AGG | - | chr1_3:4754604-4754623 | Msa0098740:intron | 30.0% | |
| !! | TCATTTTTCTTCTGCTTTCA+CGG | + | chr1_3:4754635-4754654 | None:intergenic | 30.0% |
| TGAGCTTAATCAACTTCATA+AGG | - | chr1_3:4754797-4754816 | Msa0098740:intron | 30.0% | |
| GGAAAGAAGAAACTAGAATT+TGG | - | chr1_3:4754978-4754997 | Msa0098740:intron | 30.0% | |
| AATGTGAAGGTTGAAAGTAA+AGG | - | chr1_3:4755119-4755138 | Msa0098740:intron | 30.0% | |
| ATGTGAAGGTTGAAAGTAAA+GGG | - | chr1_3:4755120-4755139 | Msa0098740:intron | 30.0% | |
| TCGAAAAAGAGAAATGAAGT+GGG | - | chr1_3:4755173-4755192 | Msa0098740:intron | 30.0% | |
| TGAAAAGGAGAAGAATTTAG+AGG | - | chr1_3:4755199-4755218 | Msa0098740:CDS | 30.0% | |
| AGTAAATTACATGCTGAAGA+GGG | - | chr1_3:4755362-4755381 | Msa0098740:CDS | 30.0% | |
| AAAATGAAAAGGAAACACGA+GGG | - | chr1_3:4755455-4755474 | Msa0098740:CDS | 30.0% | |
| GTACTATCATAGAACATATG+AGG | - | chr1_3:4755634-4755653 | Msa0098740:CDS | 30.0% | |
| ! | TGATAGCTGTTAAATCGTTT+TGG | - | chr1_3:4755739-4755758 | Msa0098740:CDS | 30.0% |
| ! | ATGACAGATTTTCACTTGTA+AGG | - | chr1_3:4755768-4755787 | Msa0098740:CDS | 30.0% |
| TAAAGTATGAGTGAAAACCA+AGG | + | chr1_3:4756022-4756041 | None:intergenic | 30.0% | |
| !! | GAATTCATTGTTGACTTAAG+AGG | - | chr1_3:4756105-4756124 | Msa0098740:intron | 30.0% |
| AGAAATTTCACAACATCTTC+AGG | + | chr1_3:4756254-4756273 | None:intergenic | 30.0% | |
| AAAGGAGAAAAAGGAAAACC+TGG | + | chr1_3:4754508-4754527 | None:intergenic | 35.0% | |
| AAATTTGTCTCTGCTGACAA+CGG | - | chr1_3:4754723-4754742 | Msa0098740:intron | 35.0% | |
| ACTTCATAAGGAGCTTAAAC+CGG | - | chr1_3:4754809-4754828 | Msa0098740:intron | 35.0% | |
| !! | AACAGATGATAGTGGTAGAT+TGG | - | chr1_3:4754866-4754885 | Msa0098740:intron | 35.0% |
| AAGAAGAATGGAAGTGAGTT+AGG | - | chr1_3:4755011-4755030 | Msa0098740:intron | 35.0% | |
| GTCGAAAAAGAGAAATGAAG+TGG | - | chr1_3:4755172-4755191 | Msa0098740:intron | 35.0% | |
| CGAAAAAGAGAAATGAAGTG+GGG | - | chr1_3:4755174-4755193 | Msa0098740:intron | 35.0% | |
| AAGGAGAAGAATTTAGAGGT+TGG | - | chr1_3:4755203-4755222 | Msa0098740:CDS | 35.0% | |
| TTTAGAGGTTGGAAATGTGA+AGG | - | chr1_3:4755214-4755233 | Msa0098740:CDS | 35.0% | |
| TTAGAGGTTGGAAATGTGAA+GGG | - | chr1_3:4755215-4755234 | Msa0098740:CDS | 35.0% | |
| GTGGAGAAAAAACTAAGCAA+TGG | - | chr1_3:4755257-4755276 | Msa0098740:CDS | 35.0% | |
| ATTCTCGGGATGTAGAAATT+AGG | - | chr1_3:4755309-4755328 | Msa0098740:CDS | 35.0% | |
| ! | TCGAAAAAGAAGCATGAAAC+TGG | - | chr1_3:4755332-4755351 | Msa0098740:CDS | 35.0% |
| ! | CGAAAAAGAAGCATGAAACT+GGG | - | chr1_3:4755333-4755352 | Msa0098740:CDS | 35.0% |
| GAGTAAATTACATGCTGAAG+AGG | - | chr1_3:4755361-4755380 | Msa0098740:CDS | 35.0% | |
| GAAAATGAAAAGGAAACACG+AGG | - | chr1_3:4755454-4755473 | Msa0098740:CDS | 35.0% | |
| CGAGGGTTAAGCTTAAATTT+AGG | - | chr1_3:4755472-4755491 | Msa0098740:CDS | 35.0% | |
| ! | ATCAGGAATTTTCACTTGCA+AGG | - | chr1_3:4755585-4755604 | Msa0098740:CDS | 35.0% |
| CATATGAGGAATTCGCTTAT+TGG | - | chr1_3:4755648-4755667 | Msa0098740:intron | 35.0% | |
| TGAGATGCAGTGTTAAGTTA+CGG | - | chr1_3:4755915-4755934 | Msa0098740:intron | 35.0% | |
| GTTATTTATGACTTCCTCCT+CGG | + | chr1_3:4755947-4755966 | None:intergenic | 35.0% | |
| GGTTCATCATATATGACACT+GGG | + | chr1_3:4756001-4756020 | None:intergenic | 35.0% | |
| AGGTTCATCATATATGACAC+TGG | + | chr1_3:4756002-4756021 | None:intergenic | 35.0% | |
| GTGTCATATATGATGAACCT+TGG | - | chr1_3:4756002-4756021 | Msa0098740:intron | 35.0% | |
| !! | TGTTGACTTAAGAGGCTTTA+AGG | - | chr1_3:4756113-4756132 | Msa0098740:intron | 35.0% |
| TTTCCAATGTAGAATACTGC+TGG | - | chr1_3:4756221-4756240 | Msa0098740:CDS | 35.0% | |
| TTCCAATGTAGAATACTGCT+GGG | - | chr1_3:4756222-4756241 | Msa0098740:CDS | 35.0% | |
| AAAGGAGAAAAAGGAAAACC+TGG | + | chr1_3:4754508-4754527 | None:intergenic | 35.0% | |
| AAATTTGTCTCTGCTGACAA+CGG | - | chr1_3:4754723-4754742 | Msa0098740:intron | 35.0% | |
| ACTTCATAAGGAGCTTAAAC+CGG | - | chr1_3:4754809-4754828 | Msa0098740:intron | 35.0% | |
| !! | AACAGATGATAGTGGTAGAT+TGG | - | chr1_3:4754866-4754885 | Msa0098740:intron | 35.0% |
| AAGAAGAATGGAAGTGAGTT+AGG | - | chr1_3:4755011-4755030 | Msa0098740:intron | 35.0% | |
| GTCGAAAAAGAGAAATGAAG+TGG | - | chr1_3:4755172-4755191 | Msa0098740:intron | 35.0% | |
| CGAAAAAGAGAAATGAAGTG+GGG | - | chr1_3:4755174-4755193 | Msa0098740:intron | 35.0% | |
| AAGGAGAAGAATTTAGAGGT+TGG | - | chr1_3:4755203-4755222 | Msa0098740:CDS | 35.0% | |
| TTTAGAGGTTGGAAATGTGA+AGG | - | chr1_3:4755214-4755233 | Msa0098740:CDS | 35.0% | |
| TTAGAGGTTGGAAATGTGAA+GGG | - | chr1_3:4755215-4755234 | Msa0098740:CDS | 35.0% | |
| GTGGAGAAAAAACTAAGCAA+TGG | - | chr1_3:4755257-4755276 | Msa0098740:CDS | 35.0% | |
| ATTCTCGGGATGTAGAAATT+AGG | - | chr1_3:4755309-4755328 | Msa0098740:CDS | 35.0% | |
| ! | TCGAAAAAGAAGCATGAAAC+TGG | - | chr1_3:4755332-4755351 | Msa0098740:CDS | 35.0% |
| ! | CGAAAAAGAAGCATGAAACT+GGG | - | chr1_3:4755333-4755352 | Msa0098740:CDS | 35.0% |
| GAGTAAATTACATGCTGAAG+AGG | - | chr1_3:4755361-4755380 | Msa0098740:CDS | 35.0% | |
| GAAAATGAAAAGGAAACACG+AGG | - | chr1_3:4755454-4755473 | Msa0098740:CDS | 35.0% | |
| CGAGGGTTAAGCTTAAATTT+AGG | - | chr1_3:4755472-4755491 | Msa0098740:CDS | 35.0% | |
| ! | ATCAGGAATTTTCACTTGCA+AGG | - | chr1_3:4755585-4755604 | Msa0098740:CDS | 35.0% |
| CATATGAGGAATTCGCTTAT+TGG | - | chr1_3:4755648-4755667 | Msa0098740:intron | 35.0% | |
| TGAGATGCAGTGTTAAGTTA+CGG | - | chr1_3:4755915-4755934 | Msa0098740:intron | 35.0% | |
| GTTATTTATGACTTCCTCCT+CGG | + | chr1_3:4755947-4755966 | None:intergenic | 35.0% | |
| GGTTCATCATATATGACACT+GGG | + | chr1_3:4756001-4756020 | None:intergenic | 35.0% | |
| AGGTTCATCATATATGACAC+TGG | + | chr1_3:4756002-4756021 | None:intergenic | 35.0% | |
| GTGTCATATATGATGAACCT+TGG | - | chr1_3:4756002-4756021 | Msa0098740:intron | 35.0% | |
| !! | TGTTGACTTAAGAGGCTTTA+AGG | - | chr1_3:4756113-4756132 | Msa0098740:intron | 35.0% |
| TTTCCAATGTAGAATACTGC+TGG | - | chr1_3:4756221-4756240 | Msa0098740:CDS | 35.0% | |
| TTCCAATGTAGAATACTGCT+GGG | - | chr1_3:4756222-4756241 | Msa0098740:CDS | 35.0% | |
| GTTGTCAGCAGAGACAAATT+TGG | + | chr1_3:4754724-4754743 | None:intergenic | 40.0% | |
| ATTAAGCTCATTGAAAGCCG+TGG | + | chr1_3:4754787-4754806 | None:intergenic | 40.0% | |
| TACCACTATCATCTGTTGCA+TGG | + | chr1_3:4754863-4754882 | None:intergenic | 40.0% | |
| !! | GATTGGTCGAAAGTACTGTT+CGG | - | chr1_3:4754883-4754902 | Msa0098740:intron | 40.0% |
| ! | GAGAAGCGTGATAAGAAAGA+TGG | - | chr1_3:4754957-4754976 | Msa0098740:intron | 40.0% |
| ! | GGAGAGAGTGTAAAGAAGAA+TGG | - | chr1_3:4754999-4755018 | Msa0098740:intron | 40.0% |
| CGAGAAGAAGAACAAGAAGA+AGG | - | chr1_3:4755076-4755095 | Msa0098740:intron | 40.0% | |
| ! | AAGAAGGAGAAGAGTGTAGA+AGG | - | chr1_3:4755092-4755111 | Msa0098740:intron | 40.0% |
| ! | AGAAGGAGAAGAGTGTAGAA+GGG | - | chr1_3:4755093-4755112 | Msa0098740:intron | 40.0% |
| CTAATTTCTAACTCCTGAGG+AGG | + | chr1_3:4755152-4755171 | None:intergenic | 40.0% | |
| CTCCTCAGGAGTTAGAAATT+AGG | - | chr1_3:4755150-4755169 | Msa0098740:intron | 40.0% | |
| GACCTAATTTCTAACTCCTG+AGG | + | chr1_3:4755155-4755174 | None:intergenic | 40.0% | |
| AAATGAAGTGGGGAGTGAAA+AGG | - | chr1_3:4755184-4755203 | Msa0098740:intron | 40.0% | |
| AATGGTGTGAAGAGTGAAAG+TGG | - | chr1_3:4755275-4755294 | Msa0098740:CDS | 40.0% | |
| GAAGAGGAAGAATGAAGACA+CGG | - | chr1_3:4755403-4755422 | Msa0098740:intron | 40.0% | |
| TTGCAAGGTTGCTTACATTG+TGG | - | chr1_3:4755600-4755619 | Msa0098740:CDS | 40.0% | |
| TTGTAAGGTTGCTTGCAATG+TGG | - | chr1_3:4755783-4755802 | Msa0098740:CDS | 40.0% | |
| TGTGGCATCACTTTATGTAG+TGG | - | chr1_3:4755801-4755820 | Msa0098740:CDS | 40.0% | |
| GTAGTGGCATATAACATCAG+AGG | - | chr1_3:4755817-4755836 | Msa0098740:CDS | 40.0% | |
| ! | TTAAGTTACGGATTTTGCCG+AGG | - | chr1_3:4755927-4755946 | Msa0098740:intron | 40.0% |
| CTGGGAACACGGAAAAAAAT+TGG | + | chr1_3:4755983-4756002 | None:intergenic | 40.0% | |
| CATATATGACACTGGGAACA+CGG | + | chr1_3:4755994-4756013 | None:intergenic | 40.0% | |
| ! | TATTCCCCAATTCTTTTCCG+CGG | - | chr1_3:4756060-4756079 | Msa0098740:intron | 40.0% |
| ! | CAACTGTTTAATTGACTCCG+CGG | + | chr1_3:4756080-4756099 | None:intergenic | 40.0% |
| ATCCCAGCAGTATTCTACAT+TGG | + | chr1_3:4756227-4756246 | None:intergenic | 40.0% | |
| GTTGTCAGCAGAGACAAATT+TGG | + | chr1_3:4754724-4754743 | None:intergenic | 40.0% | |
| ATTAAGCTCATTGAAAGCCG+TGG | + | chr1_3:4754787-4754806 | None:intergenic | 40.0% | |
| TACCACTATCATCTGTTGCA+TGG | + | chr1_3:4754863-4754882 | None:intergenic | 40.0% | |
| !! | GATTGGTCGAAAGTACTGTT+CGG | - | chr1_3:4754883-4754902 | Msa0098740:intron | 40.0% |
| ! | GAGAAGCGTGATAAGAAAGA+TGG | - | chr1_3:4754957-4754976 | Msa0098740:intron | 40.0% |
| ! | GGAGAGAGTGTAAAGAAGAA+TGG | - | chr1_3:4754999-4755018 | Msa0098740:intron | 40.0% |
| CGAGAAGAAGAACAAGAAGA+AGG | - | chr1_3:4755076-4755095 | Msa0098740:intron | 40.0% | |
| ! | AAGAAGGAGAAGAGTGTAGA+AGG | - | chr1_3:4755092-4755111 | Msa0098740:intron | 40.0% |
| ! | AGAAGGAGAAGAGTGTAGAA+GGG | - | chr1_3:4755093-4755112 | Msa0098740:intron | 40.0% |
| CTAATTTCTAACTCCTGAGG+AGG | + | chr1_3:4755152-4755171 | None:intergenic | 40.0% | |
| CTCCTCAGGAGTTAGAAATT+AGG | - | chr1_3:4755150-4755169 | Msa0098740:intron | 40.0% | |
| GACCTAATTTCTAACTCCTG+AGG | + | chr1_3:4755155-4755174 | None:intergenic | 40.0% | |
| AAATGAAGTGGGGAGTGAAA+AGG | - | chr1_3:4755184-4755203 | Msa0098740:intron | 40.0% | |
| AATGGTGTGAAGAGTGAAAG+TGG | - | chr1_3:4755275-4755294 | Msa0098740:CDS | 40.0% | |
| GAAGAGGAAGAATGAAGACA+CGG | - | chr1_3:4755403-4755422 | Msa0098740:intron | 40.0% | |
| TTGCAAGGTTGCTTACATTG+TGG | - | chr1_3:4755600-4755619 | Msa0098740:CDS | 40.0% | |
| TTGTAAGGTTGCTTGCAATG+TGG | - | chr1_3:4755783-4755802 | Msa0098740:CDS | 40.0% | |
| TGTGGCATCACTTTATGTAG+TGG | - | chr1_3:4755801-4755820 | Msa0098740:CDS | 40.0% | |
| GTAGTGGCATATAACATCAG+AGG | - | chr1_3:4755817-4755836 | Msa0098740:CDS | 40.0% | |
| ! | TTAAGTTACGGATTTTGCCG+AGG | - | chr1_3:4755927-4755946 | Msa0098740:intron | 40.0% |
| CTGGGAACACGGAAAAAAAT+TGG | + | chr1_3:4755983-4756002 | None:intergenic | 40.0% | |
| CATATATGACACTGGGAACA+CGG | + | chr1_3:4755994-4756013 | None:intergenic | 40.0% | |
| ! | TATTCCCCAATTCTTTTCCG+CGG | - | chr1_3:4756060-4756079 | Msa0098740:intron | 40.0% |
| ! | CAACTGTTTAATTGACTCCG+CGG | + | chr1_3:4756080-4756099 | None:intergenic | 40.0% |
| ATCCCAGCAGTATTCTACAT+TGG | + | chr1_3:4756227-4756246 | None:intergenic | 40.0% | |
| CTGGTTTCTGATGCAAACGA+GGG | + | chr1_3:4754391-4754410 | None:intergenic | 45.0% | |
| GAAAACCTGGAAGAGTTTGC+CGG | + | chr1_3:4754495-4754514 | None:intergenic | 45.0% | |
| AGCCATGCAACAGATGATAG+TGG | - | chr1_3:4754858-4754877 | Msa0098740:intron | 45.0% | |
| GTTCGGAGTGATGTTAAACC+TGG | - | chr1_3:4754900-4754919 | Msa0098740:intron | 45.0% | |
| AAACCTGGTCGTGAAGTTGT+TGG | - | chr1_3:4754915-4754934 | Msa0098740:intron | 45.0% | |
| !! | TGAAGTTGTTGGTTCTGTCG+TGG | - | chr1_3:4754926-4754945 | Msa0098740:intron | 45.0% |
| !! | GAAGTTGTTGGTTCTGTCGT+GGG | - | chr1_3:4754927-4754946 | Msa0098740:intron | 45.0% |
| GAATGGAAGTGAGTTAGGTC+AGG | - | chr1_3:4755016-4755035 | Msa0098740:intron | 45.0% | |
| TCAGGACGATGAAGGAAGAA+CGG | - | chr1_3:4755034-4755053 | Msa0098740:intron | 45.0% | |
| ! | GAAGGAGAAGAGTGTAGAAG+GGG | - | chr1_3:4755094-4755113 | Msa0098740:intron | 45.0% |
| TGTAGAAGGGGAGAATGTGA+AGG | - | chr1_3:4755106-4755125 | Msa0098740:intron | 45.0% | |
| TAAAGGGATAGTTCCTCCTC+AGG | - | chr1_3:4755136-4755155 | Msa0098740:intron | 45.0% | |
| ACGAGAACAACAGAAAGAGG+TGG | - | chr1_3:4755238-4755257 | Msa0098740:CDS | 45.0% | |
| GTGTGAAGAGTGAAAGTGGA+GGG | - | chr1_3:4755279-4755298 | Msa0098740:CDS | 45.0% | |
| ACATGCTGAAGAGGGAAAGA+CGG | - | chr1_3:4755370-4755389 | Msa0098740:CDS | 45.0% | |
| AAGACACGGAAGAGAGATCT+GGG | - | chr1_3:4755417-4755436 | Msa0098740:intron | 45.0% | |
| TGATAGCCAACTCCACTTAG+TGG | - | chr1_3:4755512-4755531 | Msa0098740:CDS | 45.0% | |
| GATAGCCAACTCCACTTAGT+GGG | - | chr1_3:4755513-4755532 | Msa0098740:CDS | 45.0% | |
| CTTATCCCACTAAGTGGAGT+TGG | + | chr1_3:4755521-4755540 | None:intergenic | 45.0% | |
| CAACTCCACTTAGTGGGATA+AGG | - | chr1_3:4755519-4755538 | Msa0098740:CDS | 45.0% | |
| TGACTCCGCGGAAAAGAATT+GGG | + | chr1_3:4756068-4756087 | None:intergenic | 45.0% | |
| TTGACTCCGCGGAAAAGAAT+TGG | + | chr1_3:4756069-4756088 | None:intergenic | 45.0% | |
| CTGGTTTCTGATGCAAACGA+GGG | + | chr1_3:4754391-4754410 | None:intergenic | 45.0% | |
| GAAAACCTGGAAGAGTTTGC+CGG | + | chr1_3:4754495-4754514 | None:intergenic | 45.0% | |
| AGCCATGCAACAGATGATAG+TGG | - | chr1_3:4754858-4754877 | Msa0098740:intron | 45.0% | |
| GTTCGGAGTGATGTTAAACC+TGG | - | chr1_3:4754900-4754919 | Msa0098740:intron | 45.0% | |
| AAACCTGGTCGTGAAGTTGT+TGG | - | chr1_3:4754915-4754934 | Msa0098740:intron | 45.0% | |
| !! | TGAAGTTGTTGGTTCTGTCG+TGG | - | chr1_3:4754926-4754945 | Msa0098740:intron | 45.0% |
| !! | GAAGTTGTTGGTTCTGTCGT+GGG | - | chr1_3:4754927-4754946 | Msa0098740:intron | 45.0% |
| GAATGGAAGTGAGTTAGGTC+AGG | - | chr1_3:4755016-4755035 | Msa0098740:intron | 45.0% | |
| TCAGGACGATGAAGGAAGAA+CGG | - | chr1_3:4755034-4755053 | Msa0098740:intron | 45.0% | |
| ! | GAAGGAGAAGAGTGTAGAAG+GGG | - | chr1_3:4755094-4755113 | Msa0098740:intron | 45.0% |
| TGTAGAAGGGGAGAATGTGA+AGG | - | chr1_3:4755106-4755125 | Msa0098740:intron | 45.0% | |
| TAAAGGGATAGTTCCTCCTC+AGG | - | chr1_3:4755136-4755155 | Msa0098740:intron | 45.0% | |
| ACGAGAACAACAGAAAGAGG+TGG | - | chr1_3:4755238-4755257 | Msa0098740:CDS | 45.0% | |
| GTGTGAAGAGTGAAAGTGGA+GGG | - | chr1_3:4755279-4755298 | Msa0098740:CDS | 45.0% | |
| ACATGCTGAAGAGGGAAAGA+CGG | - | chr1_3:4755370-4755389 | Msa0098740:CDS | 45.0% | |
| AAGACACGGAAGAGAGATCT+GGG | - | chr1_3:4755417-4755436 | Msa0098740:intron | 45.0% | |
| TGATAGCCAACTCCACTTAG+TGG | - | chr1_3:4755512-4755531 | Msa0098740:CDS | 45.0% | |
| GATAGCCAACTCCACTTAGT+GGG | - | chr1_3:4755513-4755532 | Msa0098740:CDS | 45.0% | |
| CTTATCCCACTAAGTGGAGT+TGG | + | chr1_3:4755521-4755540 | None:intergenic | 45.0% | |
| CAACTCCACTTAGTGGGATA+AGG | - | chr1_3:4755519-4755538 | Msa0098740:CDS | 45.0% | |
| TGACTCCGCGGAAAAGAATT+GGG | + | chr1_3:4756068-4756087 | None:intergenic | 45.0% | |
| TTGACTCCGCGGAAAAGAAT+TGG | + | chr1_3:4756069-4756088 | None:intergenic | 45.0% | |
| ! | GCTGGTTTCTGATGCAAACG+AGG | + | chr1_3:4754392-4754411 | None:intergenic | 50.0% |
| ! | GTTTTCCGGCCAATTGAGCT+CGG | + | chr1_3:4754425-4754444 | None:intergenic | 50.0% |
| CTCCCTGTAACTACCAAGTC+CGG | + | chr1_3:4754452-4754471 | None:intergenic | 50.0% | |
| TTATCTGCTCCGTGCATCCA+CGG | - | chr1_3:4754767-4754786 | Msa0098740:intron | 50.0% | |
| CATTGAAAGCCGTGGATGCA+CGG | + | chr1_3:4754779-4754798 | None:intergenic | 50.0% | |
| TTAAACCGGCGCAGTCTCAT+AGG | - | chr1_3:4754823-4754842 | Msa0098740:intron | 50.0% | |
| TTCTTCCTATGAGACTGCGC+CGG | + | chr1_3:4754831-4754850 | None:intergenic | 50.0% | |
| GAACCAACAACTTCACGACC+AGG | + | chr1_3:4754921-4754940 | None:intergenic | 50.0% | |
| GAGTTAGGTCAGGACGATGA+AGG | - | chr1_3:4755026-4755045 | Msa0098740:intron | 50.0% | |
| GACGATGAAGGAAGAACGGA+GGG | - | chr1_3:4755038-4755057 | Msa0098740:intron | 50.0% | |
| GGGACGAGAACAACAGAAAG+AGG | - | chr1_3:4755235-4755254 | Msa0098740:CDS | 50.0% | |
| GGTGTGAAGAGTGAAAGTGG+AGG | - | chr1_3:4755278-4755297 | Msa0098740:CDS | 50.0% | |
| !! | GTGGAGGGCTAGTTGATTCT+CGG | - | chr1_3:4755294-4755313 | Msa0098740:CDS | 50.0% |
| !! | TGGAGGGCTAGTTGATTCTC+GGG | - | chr1_3:4755295-4755314 | Msa0098740:CDS | 50.0% |
| AAGAGGGAAAGACGGAGCAA+AGG | - | chr1_3:4755378-4755397 | Msa0098740:CDS | 50.0% | |
| AGACGGAGCAAAGGAAGAAG+AGG | - | chr1_3:4755387-4755406 | Msa0098740:intron | 50.0% | |
| GAAGACACGGAAGAGAGATC+TGG | - | chr1_3:4755416-4755435 | Msa0098740:intron | 50.0% | |
| AGACACGGAAGAGAGATCTG+GGG | - | chr1_3:4755418-4755437 | Msa0098740:CDS | 50.0% | |
| ! | CGAAGCCTTATCCCACTAAG+TGG | + | chr1_3:4755527-4755546 | None:intergenic | 50.0% |
| ! | AGTTACGGATTTTGCCGAGG+AGG | - | chr1_3:4755930-4755949 | Msa0098740:intron | 50.0% |
| GACTCCGCGGAAAAGAATTG+GGG | + | chr1_3:4756067-4756086 | None:intergenic | 50.0% | |
| ! | GCTGGTTTCTGATGCAAACG+AGG | + | chr1_3:4754392-4754411 | None:intergenic | 50.0% |
| ! | GTTTTCCGGCCAATTGAGCT+CGG | + | chr1_3:4754425-4754444 | None:intergenic | 50.0% |
| CTCCCTGTAACTACCAAGTC+CGG | + | chr1_3:4754452-4754471 | None:intergenic | 50.0% | |
| TTATCTGCTCCGTGCATCCA+CGG | - | chr1_3:4754767-4754786 | Msa0098740:intron | 50.0% | |
| CATTGAAAGCCGTGGATGCA+CGG | + | chr1_3:4754779-4754798 | None:intergenic | 50.0% | |
| TTAAACCGGCGCAGTCTCAT+AGG | - | chr1_3:4754823-4754842 | Msa0098740:intron | 50.0% | |
| TTCTTCCTATGAGACTGCGC+CGG | + | chr1_3:4754831-4754850 | None:intergenic | 50.0% | |
| GAACCAACAACTTCACGACC+AGG | + | chr1_3:4754921-4754940 | None:intergenic | 50.0% | |
| GAGTTAGGTCAGGACGATGA+AGG | - | chr1_3:4755026-4755045 | Msa0098740:intron | 50.0% | |
| GACGATGAAGGAAGAACGGA+GGG | - | chr1_3:4755038-4755057 | Msa0098740:intron | 50.0% | |
| GGGACGAGAACAACAGAAAG+AGG | - | chr1_3:4755235-4755254 | Msa0098740:CDS | 50.0% | |
| GGTGTGAAGAGTGAAAGTGG+AGG | - | chr1_3:4755278-4755297 | Msa0098740:CDS | 50.0% | |
| !! | GTGGAGGGCTAGTTGATTCT+CGG | - | chr1_3:4755294-4755313 | Msa0098740:CDS | 50.0% |
| !! | TGGAGGGCTAGTTGATTCTC+GGG | - | chr1_3:4755295-4755314 | Msa0098740:CDS | 50.0% |
| AAGAGGGAAAGACGGAGCAA+AGG | - | chr1_3:4755378-4755397 | Msa0098740:CDS | 50.0% | |
| AGACGGAGCAAAGGAAGAAG+AGG | - | chr1_3:4755387-4755406 | Msa0098740:intron | 50.0% | |
| GAAGACACGGAAGAGAGATC+TGG | - | chr1_3:4755416-4755435 | Msa0098740:intron | 50.0% | |
| AGACACGGAAGAGAGATCTG+GGG | - | chr1_3:4755418-4755437 | Msa0098740:CDS | 50.0% | |
| ! | CGAAGCCTTATCCCACTAAG+TGG | + | chr1_3:4755527-4755546 | None:intergenic | 50.0% |
| ! | AGTTACGGATTTTGCCGAGG+AGG | - | chr1_3:4755930-4755949 | Msa0098740:intron | 50.0% |
| GACTCCGCGGAAAAGAATTG+GGG | + | chr1_3:4756067-4756086 | None:intergenic | 50.0% | |
| CCTGTAACTACCAAGTCCGG+CGG | + | chr1_3:4754449-4754468 | None:intergenic | 55.0% | |
| ! | CGCCGGACTTGGTAGTTACA+GGG | - | chr1_3:4754447-4754466 | Msa0098740:intron | 55.0% |
| AACCTGGAAGAGTTTGCCGG+CGG | + | chr1_3:4754492-4754511 | None:intergenic | 55.0% | |
| !! | GTTGTTGGTTCTGTCGTGGG+TGG | - | chr1_3:4754930-4754949 | Msa0098740:intron | 55.0% |
| GGACGATGAAGGAAGAACGG+AGG | - | chr1_3:4755037-4755056 | Msa0098740:intron | 55.0% | |
| CCTGTAACTACCAAGTCCGG+CGG | + | chr1_3:4754449-4754468 | None:intergenic | 55.0% | |
| ! | CGCCGGACTTGGTAGTTACA+GGG | - | chr1_3:4754447-4754466 | Msa0098740:intron | 55.0% |
| AACCTGGAAGAGTTTGCCGG+CGG | + | chr1_3:4754492-4754511 | None:intergenic | 55.0% | |
| !! | GTTGTTGGTTCTGTCGTGGG+TGG | - | chr1_3:4754930-4754949 | Msa0098740:intron | 55.0% |
| GGACGATGAAGGAAGAACGG+AGG | - | chr1_3:4755037-4755056 | Msa0098740:intron | 55.0% | |
| GCAGTCGCACCGAGCTCAAT+TGG | - | chr1_3:4754413-4754432 | Msa0098740:intron | 60.0% | |
| TCGCACCGAGCTCAATTGGC+CGG | - | chr1_3:4754417-4754436 | Msa0098740:intron | 60.0% | |
| AATTGGCCGGAAAACGCCGC+CGG | - | chr1_3:4754430-4754449 | Msa0098740:intron | 60.0% | |
| ! | CCGCCGGACTTGGTAGTTAC+AGG | - | chr1_3:4754446-4754465 | Msa0098740:intron | 60.0% |
| AATTCCACCGCCAGAACCGC+CGG | - | chr1_3:4754473-4754492 | Msa0098740:intron | 60.0% | |
| GAAGAGTTTGCCGGCGGTTC+TGG | + | chr1_3:4754486-4754505 | None:intergenic | 60.0% | |
| AACCGCCGGCAAACTCTTCC+AGG | - | chr1_3:4754487-4754506 | Msa0098740:intron | 60.0% | |
| GCAGTCGCACCGAGCTCAAT+TGG | - | chr1_3:4754413-4754432 | Msa0098740:intron | 60.0% | |
| TCGCACCGAGCTCAATTGGC+CGG | - | chr1_3:4754417-4754436 | Msa0098740:intron | 60.0% | |
| AATTGGCCGGAAAACGCCGC+CGG | - | chr1_3:4754430-4754449 | Msa0098740:intron | 60.0% | |
| ! | CCGCCGGACTTGGTAGTTAC+AGG | - | chr1_3:4754446-4754465 | Msa0098740:intron | 60.0% |
| AATTCCACCGCCAGAACCGC+CGG | - | chr1_3:4754473-4754492 | Msa0098740:intron | 60.0% | |
| GAAGAGTTTGCCGGCGGTTC+TGG | + | chr1_3:4754486-4754505 | None:intergenic | 60.0% | |
| AACCGCCGGCAAACTCTTCC+AGG | - | chr1_3:4754487-4754506 | Msa0098740:intron | 60.0% | |
| ! | CCAAGTCCGGCGGCGTTTTC+CGG | + | chr1_3:4754439-4754458 | None:intergenic | 65.0% |
| ! | GAGTTTGCCGGCGGTTCTGG+CGG | + | chr1_3:4754483-4754502 | None:intergenic | 65.0% |
| ! | CCAAGTCCGGCGGCGTTTTC+CGG | + | chr1_3:4754439-4754458 | None:intergenic | 65.0% |
| ! | GAGTTTGCCGGCGGTTCTGG+CGG | + | chr1_3:4754483-4754502 | None:intergenic | 65.0% |
| !! | GAGCTCGGTGCGACTGCAGC+TGG | + | chr1_3:4754410-4754429 | None:intergenic | 70.0% |
| CCGGAAAACGCCGCCGGACT+TGG | - | chr1_3:4754436-4754455 | Msa0098740:intron | 70.0% | |
| ! | TTTGCCGGCGGTTCTGGCGG+TGG | + | chr1_3:4754480-4754499 | None:intergenic | 70.0% |
| !! | GAGCTCGGTGCGACTGCAGC+TGG | + | chr1_3:4754410-4754429 | None:intergenic | 70.0% |
| CCGGAAAACGCCGCCGGACT+TGG | - | chr1_3:4754436-4754455 | Msa0098740:intron | 70.0% | |
| ! | TTTGCCGGCGGTTCTGGCGG+TGG | + | chr1_3:4754480-4754499 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 4754343 | 4756295 | 4754343 | ID=Msa0098740;Name=Msa0098740 |
| chr1_3 | mRNA | 4754343 | 4756295 | 4754343 | ID=Msa0098740-mRNA-1;Parent=Msa0098740;Name=Msa0098740-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0|0|1|0|0|7|0|325 |
| chr1_3 | exon | 4756130 | 4756295 | 4756130 | ID=Msa0098740-mRNA-1:exon:1700;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4755684 | 4755932 | 4755684 | ID=Msa0098740-mRNA-1:exon:1699;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4755418 | 4755662 | 4755418 | ID=Msa0098740-mRNA-1:exon:1698;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4755194 | 4755402 | 4755194 | ID=Msa0098740-mRNA-1:exon:1697;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4754581 | 4754588 | 4754581 | ID=Msa0098740-mRNA-1:exon:1696;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4754504 | 4754541 | 4754504 | ID=Msa0098740-mRNA-1:exon:1695;Parent=Msa0098740-mRNA-1 |
| chr1_3 | exon | 4754343 | 4754405 | 4754343 | ID=Msa0098740-mRNA-1:exon:1694;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4756130 | 4756295 | 4756130 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4755684 | 4755932 | 4755684 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4755418 | 4755662 | 4755418 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4755194 | 4755402 | 4755194 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4754581 | 4754588 | 4754581 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4754504 | 4754541 | 4754504 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| chr1_3 | CDS | 4754343 | 4754405 | 4754343 | ID=Msa0098740-mRNA-1:cds;Parent=Msa0098740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
