Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591890 | XP_024638897.1 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591890 | sp|Q93VV0|ZDHC6_ARATH | 68.683 | 281 | 86 | 1 | 13 | 291 | 5 | 285 | 2.30e-137 | 392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591890 | A0A072UT43 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026250 | Msa0591890 | 0.802623 | 5.138111e-49 | -8.615850e-47 |
| Msa0027030 | Msa0591890 | -0.800012 | 1.759653e-48 | -8.615850e-47 |
| Msa0034100 | Msa0591890 | -0.816948 | 4.249958e-52 | -8.615850e-47 |
| Msa0036550 | Msa0591890 | 0.808467 | 3.053111e-50 | -8.615850e-47 |
| Msa0042240 | Msa0591890 | -0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0081790 | Msa0591890 | -0.814466 | 1.519103e-51 | -8.615850e-47 |
| Msa0086620 | Msa0591890 | -0.804243 | 2.372417e-49 | -8.615850e-47 |
| Msa0128110 | Msa0591890 | -0.821886 | 3.180288e-53 | -8.615850e-47 |
| Msa0136180 | Msa0591890 | -0.808395 | 3.163128e-50 | -8.615850e-47 |
| Msa0136560 | Msa0591890 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0137010 | Msa0591890 | -0.815709 | 8.046542e-52 | -8.615850e-47 |
| Msa0140870 | Msa0591890 | -0.805828 | 1.105427e-49 | -8.615850e-47 |
| Msa0189250 | Msa0591890 | -0.803356 | 3.625134e-49 | -8.615850e-47 |
| Msa0221460 | Msa0591890 | -0.829011 | 6.533955e-55 | -8.615850e-47 |
| Msa0229750 | Msa0591890 | -0.801929 | 7.140042e-49 | -8.615850e-47 |
| Msa0371350 | Msa0591890 | -0.804929 | 1.705851e-49 | -8.615850e-47 |
| Msa0372100 | Msa0591890 | 0.801643 | 8.173176e-49 | -8.615850e-47 |
| Msa0385870 | Msa0591890 | -0.800745 | 1.247707e-48 | -8.615850e-47 |
| Msa0395300 | Msa0591890 | -0.814092 | 1.837496e-51 | -8.615850e-47 |
| Msa0419420 | Msa0591890 | -0.802787 | 4.753250e-49 | -8.615850e-47 |
| Msa0430040 | Msa0591890 | -0.815094 | 1.102353e-51 | -8.615850e-47 |
| Msa0434820 | Msa0591890 | -0.802895 | 4.515707e-49 | -8.615850e-47 |
| Msa0244820 | Msa0591890 | -0.824588 | 7.440770e-54 | -8.615850e-47 |
| Msa0300670 | Msa0591890 | -0.822602 | 2.170084e-53 | -8.615850e-47 |
| Msa0337760 | Msa0591890 | -0.828049 | 1.115766e-54 | -8.615850e-47 |
| Msa0483090 | Msa0591890 | -0.808511 | 2.988081e-50 | -8.615850e-47 |
| Msa0485210 | Msa0591890 | -0.802561 | 5.291279e-49 | -8.615850e-47 |
| Msa0522810 | Msa0591890 | -0.805876 | 1.079934e-49 | -8.615850e-47 |
| Msa0523400 | Msa0591890 | -0.802682 | 4.996077e-49 | -8.615850e-47 |
| Msa0526150 | Msa0591890 | 0.804002 | 2.662870e-49 | -8.615850e-47 |
| Msa0541880 | Msa0591890 | 0.843462 | 1.380891e-58 | -8.615850e-47 |
| Msa0541940 | Msa0591890 | 0.842576 | 2.377207e-58 | -8.615850e-47 |
| Msa0549870 | Msa0591890 | 0.807038 | 6.142635e-50 | -8.615850e-47 |
| Msa0566090 | Msa0591890 | -0.807702 | 4.442751e-50 | -8.615850e-47 |
| Msa0568460 | Msa0591890 | -0.805313 | 1.417779e-49 | -8.615850e-47 |
| Msa0572360 | Msa0591890 | 0.806653 | 7.409656e-50 | -8.615850e-47 |
| Msa0575950 | Msa0591890 | 0.806043 | 9.961599e-50 | -8.615850e-47 |
| Msa0578830 | Msa0591890 | 0.801227 | 9.946971e-49 | -8.615850e-47 |
| Msa0591890 | Msa0598470 | -0.811708 | 6.114613e-51 | -8.615850e-47 |
| Msa0591890 | Msa0605350 | 0.800545 | 1.370897e-48 | -8.615850e-47 |
| Msa0591890 | Msa0619530 | -0.804154 | 2.474811e-49 | -8.615850e-47 |
| Msa0591890 | Msa0619690 | -0.808341 | 3.248381e-50 | -8.615850e-47 |
| Msa0591890 | Msa0631900 | 0.911460 | 5.930202e-83 | -8.615850e-47 |
| Msa0591890 | Msa0667840 | -0.802722 | 4.903096e-49 | -8.615850e-47 |
| Msa0591890 | Msa0670740 | 0.854693 | 1.038712e-61 | -8.615850e-47 |
| Msa0591890 | Msa0673940 | 0.807584 | 4.705816e-50 | -8.615850e-47 |
| Msa0591890 | Msa0685390 | -0.821881 | 3.188841e-53 | -8.615850e-47 |
| Msa0591890 | Msa0685610 | 0.858690 | 6.927535e-63 | -8.615850e-47 |
| Msa0591890 | Msa0702360 | -0.810495 | 1.120473e-50 | -8.615850e-47 |
| Msa0591890 | Msa0702560 | -0.804274 | 2.336690e-49 | -8.615850e-47 |
| Msa0591890 | Msa0756670 | -0.814794 | 1.284726e-51 | -8.615850e-47 |
| Msa0591890 | Msa0768240 | -0.811274 | 7.600772e-51 | -8.615850e-47 |
| Msa0591890 | Msa0797950 | 0.807936 | 3.961450e-50 | -8.615850e-47 |
| Msa0591890 | Msa0797980 | -0.804356 | 2.246897e-49 | -8.615850e-47 |
| Msa0591890 | Msa0813630 | -0.808124 | 3.612601e-50 | -8.615850e-47 |
| Msa0591890 | Msa0836060 | -0.809350 | 1.976535e-50 | -8.615850e-47 |
| Msa0591890 | Msa0852090 | -0.806408 | 8.348088e-50 | -8.615850e-47 |
| Msa0591890 | Msa0927190 | -0.806095 | 9.715770e-50 | -8.615850e-47 |
| Msa0591890 | Msa0931370 | 0.803248 | 3.816686e-49 | -8.615850e-47 |
| Msa0591890 | Msa0970040 | 0.823024 | 1.730721e-53 | -8.615850e-47 |
| Msa0591890 | Msa0970100 | 0.803202 | 3.900670e-49 | -8.615850e-47 |
| Msa0591890 | Msa0999480 | -0.809849 | 1.543620e-50 | -8.615850e-47 |
| Msa0591890 | Msa1010470 | -0.802522 | 5.389768e-49 | -8.615850e-47 |
| Msa0591890 | Msa1033430 | 0.805599 | 1.234817e-49 | -8.615850e-47 |
| Msa0591890 | Msa1036020 | 0.826370 | 2.815866e-54 | -8.615850e-47 |
| Msa0591890 | Msa1039440 | -0.806789 | 6.934869e-50 | -8.615850e-47 |
| Msa0591890 | Msa1057620 | -0.811827 | 5.761798e-51 | -8.615850e-47 |
| Msa0591890 | Msa1076280 | 0.806259 | 8.971269e-50 | -8.615850e-47 |
| Msa0591890 | Msa1078600 | -0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0591890 | Msa1122550 | 0.811088 | 8.339593e-51 | -8.615850e-47 |
| Msa0591890 | Msa1133440 | -0.802437 | 5.613964e-49 | -8.615850e-47 |
| Msa0591890 | Msa1136770 | -0.800383 | 1.478596e-48 | -8.615850e-47 |
| Msa0591890 | Msa1146980 | 0.802212 | 6.243570e-49 | -8.615850e-47 |
| Msa0591890 | Msa1163340 | 0.815410 | 9.377081e-52 | -8.615850e-47 |
| Msa0591890 | Msa1182530 | -0.804252 | 2.362138e-49 | -8.615850e-47 |
| Msa0591890 | Msa1191540 | -0.814973 | 1.172562e-51 | -8.615850e-47 |
| Msa0591890 | Msa1200360 | 0.835769 | 1.383394e-56 | -8.615850e-47 |
| Msa0591890 | Msa1202220 | -0.824963 | 6.070009e-54 | -8.615850e-47 |
| Msa0591890 | Msa1223710 | 0.802810 | 4.702291e-49 | -8.615850e-47 |
| Msa0591890 | Msa1224820 | -0.812408 | 4.303090e-51 | -8.615850e-47 |
| Msa0591890 | Msa1231440 | 0.815347 | 9.685958e-52 | -8.615850e-47 |
| Msa0591890 | Msa1253270 | 0.836575 | 8.633525e-57 | -8.615850e-47 |
| Msa0591890 | Msa1253300 | 0.821569 | 3.765927e-53 | -8.615850e-47 |
| Msa0591890 | Msa1255030 | -0.809996 | 1.435631e-50 | -8.615850e-47 |
| Msa0591890 | Msa1270850 | -0.813290 | 2.758665e-51 | -8.615850e-47 |
| Msa0591890 | Msa1278000 | 0.817075 | 3.978873e-52 | -8.615850e-47 |
| Msa0591890 | Msa1286950 | -0.810044 | 1.401959e-50 | -8.615850e-47 |
| Msa0591890 | Msa1288970 | -0.807945 | 3.943654e-50 | -8.615850e-47 |
| Msa0591890 | Msa1295210 | -0.802424 | 5.648619e-49 | -8.615850e-47 |
| Msa0591890 | Msa1297220 | -0.803542 | 3.316601e-49 | -8.615850e-47 |
| Msa0591890 | Msa1302630 | 0.813436 | 2.562267e-51 | -8.615850e-47 |
| Msa0591890 | Msa1319230 | -0.805209 | 1.490719e-49 | -8.615850e-47 |
| Msa0591890 | Msa1320660 | -0.820637 | 6.174300e-53 | -8.615850e-47 |
| Msa0591890 | Msa1335200 | -0.820039 | 8.466449e-53 | -8.615850e-47 |
| Msa0591890 | Msa1343450 | -0.803238 | 3.835660e-49 | -8.615850e-47 |
| Msa0591890 | Msa1349850 | -0.805472 | 1.313147e-49 | -8.615850e-47 |
| Msa0591890 | Msa1352600 | -0.811696 | 6.152635e-51 | -8.615850e-47 |
| Msa0591890 | Msa1352630 | -0.801957 | 7.047055e-49 | -8.615850e-47 |
| Msa0591890 | Msa1356450 | 0.816808 | 4.568378e-52 | -8.615850e-47 |
| Msa0591890 | Msa1369400 | -0.824423 | 8.139045e-54 | -8.615850e-47 |
| Msa0591890 | Msa1370270 | -0.823679 | 1.216752e-53 | -8.615850e-47 |
| Msa0591890 | Msa1392570 | -0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0591890 | Msa1395720 | 0.802799 | 4.725456e-49 | -8.615850e-47 |
| Msa0591890 | Msa1400290 | -0.804928 | 1.707096e-49 | -8.615850e-47 |
| Msa0591890 | Msa1409060 | 0.812715 | 3.687646e-51 | -8.615850e-47 |
| Msa0591890 | Msa1414000 | -0.832605 | 8.594127e-56 | -8.615850e-47 |
| Msa0591890 | Msa1427600 | -0.833368 | 5.553135e-56 | -8.615850e-47 |
| Msa0591890 | Msa1430630 | -0.811018 | 8.632843e-51 | -8.615850e-47 |
| Msa0591890 | Msa1438510 | 0.804850 | 1.772236e-49 | -8.615850e-47 |
| Msa0591890 | Msa1453540 | -0.811877 | 5.619729e-51 | -8.615850e-47 |
| Msa0591890 | Msa1463500 | -0.804278 | 2.332168e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591890 | MtrunA17_Chr4g0009911 | 97.619 | 294 | 4 | 2 | 1 | 291 | 1 | 294 | 0.0 | 582 |
| Msa0591890 | MtrunA17_Chr1g0199411 | 48.519 | 270 | 128 | 5 | 17 | 282 | 11 | 273 | 8.25e-85 | 255 |
| Msa0591890 | MtrunA17_Chr7g0276121 | 32.273 | 220 | 116 | 7 | 70 | 270 | 80 | 285 | 1.71e-28 | 111 |
| Msa0591890 | MtrunA17_Chr4g0011001 | 32.083 | 240 | 139 | 6 | 44 | 270 | 54 | 282 | 3.05e-27 | 107 |
| Msa0591890 | MtrunA17_Chr1g0201631 | 31.313 | 198 | 110 | 6 | 51 | 225 | 67 | 261 | 3.59e-22 | 95.5 |
| Msa0591890 | MtrunA17_Chr7g0255151 | 30.081 | 246 | 120 | 10 | 45 | 260 | 84 | 307 | 1.33e-21 | 94.0 |
| Msa0591890 | MtrunA17_Chr6g0464751 | 31.343 | 201 | 108 | 7 | 51 | 225 | 67 | 263 | 2.11e-20 | 90.5 |
| Msa0591890 | MtrunA17_Chr6g0462021 | 29.167 | 192 | 107 | 5 | 76 | 256 | 123 | 296 | 4.03e-19 | 87.0 |
| Msa0591890 | MtrunA17_Chr3g0131931 | 27.189 | 217 | 111 | 6 | 73 | 260 | 103 | 301 | 1.19e-17 | 82.4 |
| Msa0591890 | MtrunA17_Chr7g0255161 | 27.197 | 239 | 126 | 9 | 75 | 291 | 67 | 279 | 1.29e-16 | 79.0 |
| Msa0591890 | MtrunA17_Chr5g0406311 | 29.189 | 185 | 111 | 5 | 105 | 283 | 170 | 340 | 6.66e-16 | 77.0 |
| Msa0591890 | MtrunA17_Chr1g0163561 | 32.692 | 156 | 80 | 3 | 12 | 167 | 85 | 215 | 7.90e-16 | 76.6 |
| Msa0591890 | MtrunA17_Chr7g0273371 | 27.500 | 240 | 137 | 7 | 22 | 235 | 86 | 314 | 1.12e-15 | 76.6 |
| Msa0591890 | MtrunA17_Chr4g0037991 | 46.479 | 71 | 35 | 1 | 100 | 167 | 163 | 233 | 5.12e-15 | 74.3 |
| Msa0591890 | MtrunA17_Chr4g0064931 | 26.482 | 253 | 156 | 8 | 22 | 256 | 293 | 533 | 7.43e-15 | 74.7 |
| Msa0591890 | MtrunA17_Chr4g0038841 | 30.065 | 153 | 95 | 4 | 99 | 239 | 177 | 329 | 6.67e-14 | 72.0 |
| Msa0591890 | MtrunA17_Chr7g0251761 | 31.847 | 157 | 92 | 5 | 104 | 256 | 151 | 296 | 2.53e-13 | 69.7 |
| Msa0591890 | MtrunA17_Chr4g0049351 | 46.154 | 65 | 35 | 0 | 103 | 167 | 362 | 426 | 3.50e-13 | 69.7 |
| Msa0591890 | MtrunA17_Chr1g0193941 | 28.025 | 157 | 97 | 3 | 84 | 228 | 141 | 293 | 5.10e-13 | 68.9 |
| Msa0591890 | MtrunA17_Chr4g0042821 | 29.670 | 182 | 109 | 6 | 104 | 266 | 180 | 361 | 1.30e-12 | 67.8 |
| Msa0591890 | MtrunA17_Chr1g0211231 | 27.602 | 221 | 124 | 8 | 44 | 256 | 333 | 525 | 4.13e-12 | 66.2 |
| Msa0591890 | MtrunA17_Chr1g0211241 | 26.772 | 254 | 163 | 7 | 12 | 256 | 371 | 610 | 2.91e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591890 | AT3G09320.1 | 68.683 | 281 | 86 | 1 | 13 | 291 | 5 | 285 | 2.34e-138 | 392 |
| Msa0591890 | AT5G04270.1 | 51.969 | 254 | 114 | 3 | 16 | 267 | 7 | 254 | 1.97e-81 | 247 |
| Msa0591890 | AT4G22750.1 | 34.529 | 223 | 119 | 6 | 57 | 266 | 62 | 270 | 5.26e-31 | 118 |
| Msa0591890 | AT4G00840.1 | 29.930 | 284 | 166 | 9 | 22 | 283 | 17 | 289 | 1.07e-29 | 114 |
| Msa0591890 | AT3G60800.1 | 32.917 | 240 | 131 | 8 | 44 | 266 | 54 | 280 | 2.06e-28 | 111 |
| Msa0591890 | AT4G00840.2 | 42.593 | 108 | 57 | 3 | 44 | 146 | 47 | 154 | 1.90e-22 | 93.2 |
| Msa0591890 | AT5G50020.3 | 33.166 | 199 | 105 | 7 | 51 | 225 | 66 | 260 | 3.80e-22 | 95.9 |
| Msa0591890 | AT5G50020.2 | 33.166 | 199 | 105 | 7 | 51 | 225 | 96 | 290 | 4.96e-22 | 95.5 |
| Msa0591890 | AT3G56930.1 | 31.579 | 190 | 102 | 6 | 75 | 256 | 123 | 292 | 1.50e-21 | 94.4 |
| Msa0591890 | AT4G24630.1 | 29.046 | 241 | 134 | 8 | 12 | 222 | 24 | 257 | 5.21e-20 | 89.7 |
| Msa0591890 | AT5G41060.2 | 25.000 | 264 | 152 | 10 | 20 | 256 | 34 | 278 | 5.35e-19 | 86.7 |
| Msa0591890 | AT5G41060.1 | 25.000 | 264 | 152 | 10 | 20 | 256 | 49 | 293 | 6.05e-19 | 86.7 |
| Msa0591890 | AT5G41060.3 | 27.468 | 233 | 123 | 10 | 51 | 256 | 13 | 226 | 7.07e-19 | 85.9 |
| Msa0591890 | AT5G41060.4 | 27.468 | 233 | 123 | 10 | 51 | 256 | 13 | 226 | 7.07e-19 | 85.9 |
| Msa0591890 | AT5G05070.1 | 26.394 | 269 | 153 | 9 | 20 | 260 | 66 | 317 | 1.38e-18 | 85.5 |
| Msa0591890 | AT5G50020.1 | 32.161 | 199 | 100 | 8 | 51 | 225 | 66 | 253 | 9.07e-18 | 83.2 |
| Msa0591890 | AT3G48760.1 | 28.111 | 217 | 109 | 9 | 73 | 260 | 110 | 308 | 2.97e-17 | 82.0 |
| Msa0591890 | AT2G40990.1 | 29.032 | 186 | 101 | 7 | 75 | 252 | 137 | 299 | 6.47e-17 | 80.9 |
| Msa0591890 | AT3G26935.1 | 30.256 | 195 | 109 | 7 | 54 | 225 | 83 | 273 | 7.95e-17 | 80.5 |
| Msa0591890 | AT3G56920.1 | 27.984 | 243 | 130 | 9 | 45 | 260 | 64 | 288 | 1.31e-16 | 79.3 |
| Msa0591890 | AT3G51390.2 | 28.302 | 212 | 139 | 4 | 74 | 285 | 133 | 331 | 7.25e-16 | 77.0 |
| Msa0591890 | AT3G51390.1 | 29.282 | 181 | 120 | 3 | 105 | 285 | 164 | 336 | 7.76e-16 | 77.0 |
| Msa0591890 | AT3G04970.3 | 30.918 | 207 | 105 | 8 | 57 | 235 | 31 | 227 | 1.96e-15 | 75.5 |
| Msa0591890 | AT2G14255.1 | 28.405 | 257 | 157 | 8 | 16 | 256 | 275 | 520 | 2.16e-15 | 76.6 |
| Msa0591890 | AT3G18620.1 | 36.538 | 104 | 55 | 2 | 104 | 196 | 149 | 252 | 2.21e-15 | 75.9 |
| Msa0591890 | AT3G04970.1 | 30.918 | 207 | 105 | 8 | 57 | 235 | 118 | 314 | 5.20e-15 | 75.1 |
| Msa0591890 | AT3G56930.2 | 32.000 | 150 | 63 | 4 | 75 | 224 | 123 | 233 | 1.92e-14 | 73.6 |
| Msa0591890 | AT3G04970.2 | 31.383 | 188 | 101 | 7 | 58 | 222 | 119 | 301 | 2.50e-14 | 72.4 |
| Msa0591890 | AT1G69420.1 | 31.579 | 152 | 92 | 3 | 104 | 243 | 164 | 315 | 4.27e-13 | 69.7 |
| Msa0591890 | AT1G69420.2 | 31.579 | 152 | 92 | 3 | 104 | 243 | 164 | 315 | 4.27e-13 | 69.7 |
| Msa0591890 | AT5G20350.1 | 30.846 | 201 | 116 | 7 | 73 | 256 | 334 | 528 | 5.89e-13 | 69.3 |
| Msa0591890 | AT3G22180.1 | 25.000 | 192 | 121 | 5 | 63 | 242 | 143 | 323 | 2.63e-11 | 64.3 |
| Msa0591890 | AT4G15080.2 | 29.586 | 169 | 96 | 5 | 93 | 242 | 161 | 325 | 4.03e-11 | 63.9 |
| Msa0591890 | AT4G15080.1 | 29.586 | 169 | 96 | 5 | 93 | 242 | 161 | 325 | 4.03e-11 | 63.9 |
Find 84 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGTCTTGTTAGGTTT+TGG | 0.177454 | 4_2:+16856167 | Msa0591890:three_prime_UTR |
| GGTTGTTTCTGGGCTCTTAC+TGG | 0.218961 | 4_2:+16854727 | Msa0591890:intron |
| CGGCTTCGCGTTCTCGTTTC+CGG | 0.221292 | 4_2:+16851586 | Msa0591890:CDS |
| CACAGCCAGCTAAGGATATT+TGG | 0.270678 | 4_2:-16855786 | None:intergenic |
| GCTTATAGTGAGAGCACTTT+TGG | 0.276496 | 4_2:-16854111 | None:intergenic |
| ACACATAATGATATAGTTAA+AGG | 0.276995 | 4_2:-16854752 | None:intergenic |
| CCCCATCTTCCAGTCTTGTT+AGG | 0.286556 | 4_2:+16856161 | Msa0591890:three_prime_UTR |
| GATGAAATGACGACGGTTAC+CGG | 0.290148 | 4_2:-16851605 | None:intergenic |
| GTCTTCATTGATAGATGGTT+TGG | 0.295613 | 4_2:+16851659 | Msa0591890:CDS |
| CTGCTTCGCTTTCTCGATCA+TGG | 0.338698 | 4_2:-16851549 | None:intergenic |
| ACCTAAGTCCAGAACCTATA+TGG | 0.351878 | 4_2:-16855821 | None:intergenic |
| CCTAATCTATGTCTAACAAA+TGG | 0.360201 | 4_2:-16856122 | None:intergenic |
| TTGCGTTTGATTTCATGAAT+AGG | 0.366006 | 4_2:-16851827 | None:intergenic |
| GTAAGGATCACCATTGCATT+TGG | 0.377803 | 4_2:+16854261 | Msa0591890:intron |
| TCTTTGTCTTCATTGATAGA+TGG | 0.380741 | 4_2:+16851654 | Msa0591890:CDS |
| ACGACGGCGTTTATGATTCC+AGG | 0.387355 | 4_2:-16851695 | None:intergenic |
| CTCCCCGTGCACATCATTGC+CGG | 0.397317 | 4_2:+16854134 | Msa0591890:CDS |
| ACAGCAAGCCATATAGGTTC+TGG | 0.412789 | 4_2:+16855813 | Msa0591890:CDS |
| CCATTTGTTAGACATAGATT+AGG | 0.423448 | 4_2:+16856122 | Msa0591890:three_prime_UTR |
| AAGCAGCAACGCGGCGGCGG+CGG | 0.424579 | 4_2:+16851566 | Msa0591890:CDS |
| TCCCCGTGCACATCATTGCC+GGG | 0.424676 | 4_2:+16854135 | Msa0591890:CDS |
| TCATACGGGCCAAGGTCATA+TGG | 0.430628 | 4_2:-16854972 | None:intergenic |
| TGGGACCAAATATCCTTAGC+TGG | 0.447899 | 4_2:+16855781 | Msa0591890:CDS |
| CGGTGCTTTGCAGTGGACTT+TGG | 0.450312 | 4_2:+16855899 | Msa0591890:three_prime_UTR |
| CTCGGGTATATGCAGCAAAC+AGG | 0.454202 | 4_2:-16856048 | None:intergenic |
| GGCTCATCAAGGTGCTGTAA+AGG | 0.454390 | 4_2:+16856250 | Msa0591890:three_prime_UTR |
| GCCATATAGGTTCTGGACTT+AGG | 0.455513 | 4_2:+16855820 | Msa0591890:CDS |
| GCGAAGCAGCAACGCGGCGG+CGG | 0.458234 | 4_2:+16851563 | Msa0591890:CDS |
| CACATAATGATATAGTTAAA+GGG | 0.461586 | 4_2:-16854751 | None:intergenic |
| CTAATCTATGTCTAACAAAT+GGG | 0.465517 | 4_2:-16856121 | None:intergenic |
| ATAGTATTATCTTCAACATC+AGG | 0.471334 | 4_2:-16851803 | None:intergenic |
| GCTCATCAAGGTGCTGTAAA+GGG | 0.476781 | 4_2:+16856251 | Msa0591890:three_prime_UTR |
| TGGCCAACAGCAAGCCATAT+AGG | 0.481073 | 4_2:+16855807 | Msa0591890:CDS |
| ATGAAGGAGTGAGAGCTTTG+TGG | 0.484159 | 4_2:+16854916 | Msa0591890:CDS |
| ACCTAACAAGACTGGAAGAT+GGG | 0.488347 | 4_2:-16856162 | None:intergenic |
| TAGTGAGATCATAGACGGTT+CGG | 0.494795 | 4_2:-16855845 | None:intergenic |
| TTGTGTTGGCAGTATTATGA+AGG | 0.498389 | 4_2:+16854900 | Msa0591890:intron |
| AGCTTTGTGGCTTCAAGAGA+AGG | 0.500113 | 4_2:+16854929 | Msa0591890:CDS |
| GTTGGTAGTCTAGCTTATGA+TGG | 0.500150 | 4_2:+16854576 | Msa0591890:CDS |
| GTGAGCAGGGTGGAGATTTG+AGG | 0.510803 | 4_2:+16854083 | Msa0591890:intron |
| CATCCAAAACCTAACAAGAC+TGG | 0.516170 | 4_2:-16856170 | None:intergenic |
| TATACATTACATAATTGCCT+CGG | 0.517321 | 4_2:-16856066 | None:intergenic |
| ACCCCGGCAATGATGTGCAC+GGG | 0.519740 | 4_2:-16854137 | None:intergenic |
| TCAAATTCTCATACGGGCCA+AGG | 0.521925 | 4_2:-16854980 | None:intergenic |
| ACATAACAATACCACGATAG+AGG | 0.522922 | 4_2:+16854805 | Msa0591890:CDS |
| ACAGATGTCAAATTCTCATA+CGG | 0.523145 | 4_2:-16854987 | None:intergenic |
| ATACATTACATAATTGCCTC+GGG | 0.528147 | 4_2:-16856065 | None:intergenic |
| CTGTTGGCCACAGCCAGCTA+AGG | 0.531280 | 4_2:-16855794 | None:intergenic |
| TAAGTAGACGGAACCCGACC+CGG | 0.534950 | 4_2:-16851776 | None:intergenic |
| CAAATATCCTTAGCTGGCTG+TGG | 0.549591 | 4_2:+16855787 | Msa0591890:CDS |
| TGTGGCTTCAAGAGAAGGGT+GGG | 0.551105 | 4_2:+16854934 | Msa0591890:CDS |
| GATTGCCTGCATTTACTCCA+TGG | 0.552216 | 4_2:+16854346 | Msa0591890:CDS |
| TTGGATGAAATGTGCTGTCA+AGG | 0.554984 | 4_2:+16856331 | Msa0591890:three_prime_UTR |
| AAAGCGAAGCAGCAACGCGG+CGG | 0.560120 | 4_2:+16851560 | Msa0591890:CDS |
| AACCTAACAAGACTGGAAGA+TGG | 0.560773 | 4_2:-16856163 | None:intergenic |
| TATAAACATCCATATGACCT+TGG | 0.564631 | 4_2:+16854963 | Msa0591890:CDS |
| AGACGGAACCCGACCCGGAT+CGG | 0.567706 | 4_2:-16851771 | None:intergenic |
| ACCGTCTATGATCTCACTAA+AGG | 0.568962 | 4_2:+16855849 | Msa0591890:CDS |
| TAAAAGATGTGTTCTACGAA+TGG | 0.569266 | 4_2:+16854162 | Msa0591890:CDS |
| TATTCATGAAATCAAACGCA+AGG | 0.586968 | 4_2:+16851829 | Msa0591890:CDS |
| AACCCCGGCAATGATGTGCA+CGG | 0.588357 | 4_2:-16854138 | None:intergenic |
| GCTTTGTGGCTTCAAGAGAA+GGG | 0.589103 | 4_2:+16854930 | Msa0591890:CDS |
| GAACCTATATGGCTTGCTGT+TGG | 0.590025 | 4_2:-16855810 | None:intergenic |
| ACCTTTAGTGAGATCATAGA+CGG | 0.591266 | 4_2:-16855850 | None:intergenic |
| CCCCGTGCACATCATTGCCG+GGG | 0.592790 | 4_2:+16854136 | Msa0591890:CDS |
| CAGATGTCAAATTCTCATAC+GGG | 0.593509 | 4_2:-16854986 | None:intergenic |
| ATTTGGATAAATAACTGTGT+CGG | 0.599774 | 4_2:+16854278 | Msa0591890:CDS |
| AACACACATGAAAGCGATGA+CGG | 0.601760 | 4_2:-16851723 | None:intergenic |
| AGTTATTTATCCAAATGCAA+TGG | 0.610149 | 4_2:-16854271 | None:intergenic |
| TTGTGGCTTCAAGAGAAGGG+TGG | 0.610405 | 4_2:+16854933 | Msa0591890:CDS |
| ACATACCATGGAGTAAATGC+AGG | 0.612415 | 4_2:-16854351 | None:intergenic |
| CCCCGGCAATGATGTGCACG+GGG | 0.613681 | 4_2:-16854136 | None:intergenic |
| CCTAACAAGACTGGAAGATG+GGG | 0.614821 | 4_2:-16856161 | None:intergenic |
| CAAGACTGGAAGATGGGGAA+AGG | 0.623644 | 4_2:-16856156 | None:intergenic |
| TGGATGAAATGTGCTGTCAA+GGG | 0.628605 | 4_2:+16856332 | Msa0591890:three_prime_UTR |
| ACATCAGGCGTATAAGTAGA+CGG | 0.646159 | 4_2:-16851788 | None:intergenic |
| GCATGTCATAACCTCTATCG+TGG | 0.648544 | 4_2:-16854816 | None:intergenic |
| ATCAATGAAGACAAAGACGG+TGG | 0.655912 | 4_2:-16851648 | None:intergenic |
| CTGTTTGCTGCATATACCCG+AGG | 0.662259 | 4_2:+16856049 | Msa0591890:three_prime_UTR |
| CGGCAATGATGTGCACGGGG+AGG | 0.663843 | 4_2:-16854133 | None:intergenic |
| GAGAAAGCGAAGCAGCAACG+CGG | 0.693256 | 4_2:+16851557 | Msa0591890:CDS |
| TCTATCAATGAAGACAAAGA+CGG | 0.703511 | 4_2:-16851651 | None:intergenic |
| AGCGATGACGGTGAAAACGA+CGG | 0.712056 | 4_2:-16851711 | None:intergenic |
| AGCGATTGATGAAATGACGA+CGG | 0.729992 | 4_2:-16851612 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTCTTATTTAATT+GGG | + | chr4_2:16851944-16851963 | Msa0591890:intron | 10.0% |
| !!! | ATTTTTTTCTTATTTAATTG+GGG | + | chr4_2:16851945-16851964 | Msa0591890:intron | 10.0% |
| !!! | TTGTCTTTTTTGTTTTAATT+TGG | + | chr4_2:16851922-16851941 | Msa0591890:intron | 15.0% |
| !!! | GGATTTTTTTCTTATTTAAT+TGG | + | chr4_2:16851943-16851962 | Msa0591890:intron | 15.0% |
| !! | ATAAATAAATATTGTGTACT+AGG | - | chr4_2:16853837-16853856 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTGAATAAACATT+TGG | + | chr4_2:16855162-16855181 | Msa0591890:intron | 15.0% |
| !!! | TATTTTATGTATCTTGTAAT+TGG | + | chr4_2:16856312-16856331 | Msa0591890:three_prime_UTR | 15.0% |
| !!! | TATTTTATGTATCTTGTAAT+TGG | + | chr4_2:16856312-16856331 | Msa0591890:three_prime_UTR | 15.0% |
| !!! | TTTTGCATTGTTATGAATAT+TGG | + | chr4_2:16851866-16851885 | Msa0591890:intron | 20.0% |
| !! | TTTGCATTGTTATGAATATT+GGG | + | chr4_2:16851867-16851886 | Msa0591890:intron | 20.0% |
| !! | AAAAAAAACATCATGATAGT+GGG | - | chr4_2:16852739-16852758 | None:intergenic | 20.0% |
| !! | AAAAAAAAACATCATGATAG+TGG | - | chr4_2:16852740-16852759 | None:intergenic | 20.0% |
| !! | TCTACAATATTAAGAATTAG+AGG | - | chr4_2:16852816-16852835 | None:intergenic | 20.0% |
| !! | GAAAATGATTTCAATATGTT+TGG | + | chr4_2:16853554-16853573 | Msa0591890:intron | 20.0% |
| !! | AACAAGTAAAATTAATCCAA+TGG | + | chr4_2:16853905-16853924 | Msa0591890:intron | 20.0% |
| !! | TAAAATAAACAAACATACCA+TGG | - | chr4_2:16854366-16854385 | None:intergenic | 20.0% |
| !! | AAATTGTTTACTTTACTGAA+GGG | - | chr4_2:16854678-16854697 | None:intergenic | 20.0% |
| !! | AAAATTGTTTACTTTACTGA+AGG | - | chr4_2:16854679-16854698 | None:intergenic | 20.0% |
| !! | CACATAATGATATAGTTAAA+GGG | - | chr4_2:16854754-16854773 | None:intergenic | 20.0% |
| !! | ACACATAATGATATAGTTAA+AGG | - | chr4_2:16854755-16854774 | None:intergenic | 20.0% |
| !!! | ATATCATTATGTGTTCTTTT+AGG | + | chr4_2:16854761-16854780 | Msa0591890:CDS | 20.0% |
| !!! | TTTTTCTTTCTTCTTTCATT+TGG | + | chr4_2:16855136-16855155 | Msa0591890:intron | 20.0% |
| !! | TTTCTTTATGCAAACATAAA+TGG | - | chr4_2:16855415-16855434 | None:intergenic | 20.0% |
| !! | ATGTAAAAAAATTACATCGT+TGG | - | chr4_2:16855466-16855485 | None:intergenic | 20.0% |
| !!! | TCAATCATTAGAATTTTCAA+TGG | + | chr4_2:16855654-16855673 | Msa0591890:intron | 20.0% |
| !! | AAAAAAGAAGTTGAAGAAAA+GGG | - | chr4_2:16855683-16855702 | None:intergenic | 20.0% |
| !! | TAAAAAAGAAGTTGAAGAAA+AGG | - | chr4_2:16855684-16855703 | None:intergenic | 20.0% |
| !!! | TGTTTTGTTTATTTTTTTGC+AGG | + | chr4_2:16855755-16855774 | Msa0591890:intron | 20.0% |
| !!! | TTTATTTTTTTGCAGGTTTT+GGG | + | chr4_2:16855762-16855781 | Msa0591890:intron | 20.0% |
| !!! | TAACAAATGGGTTAAAAAAA+AGG | - | chr4_2:16856112-16856131 | None:intergenic | 20.0% |
| !! | CTAATGTACAAAAAGAAAAA+CGG | + | chr4_2:16856229-16856248 | Msa0591890:three_prime_UTR | 20.0% |
| !!! | TAAAATACAACTTTTCACAA+TGG | - | chr4_2:16856369-16856388 | None:intergenic | 20.0% |
| ! | ATAGTATTATCTTCAACATC+AGG | - | chr4_2:16851806-16851825 | None:intergenic | 25.0% |
| ! | AGATATGATTAATGATCCAT+TGG | + | chr4_2:16852168-16852187 | Msa0591890:intron | 25.0% |
| !!! | GATTTTTAACTAAAACACGT+CGG | - | chr4_2:16852224-16852243 | None:intergenic | 25.0% |
| !!! | TTTATGTGTGATTTGTTATG+TGG | + | chr4_2:16852351-16852370 | Msa0591890:intron | 25.0% |
| !!! | TTGTTTTTGTTGTTAATCTG+CGG | + | chr4_2:16852503-16852522 | Msa0591890:intron | 25.0% |
| ! | ATACAAACACAACAAAAAGA+AGG | - | chr4_2:16853225-16853244 | None:intergenic | 25.0% |
| !! | AAACTAGTTAGCATTTTCTT+AGG | - | chr4_2:16853337-16853356 | None:intergenic | 25.0% |
| ! | ACTAGTTAAGGAATCAAATA+TGG | + | chr4_2:16853366-16853385 | Msa0591890:intron | 25.0% |
| ! | TATGGTAAAACTTTCTTGAA+AGG | + | chr4_2:16853384-16853403 | Msa0591890:intron | 25.0% |
| ! | TCATAGGTAATTAGGAATAT+GGG | - | chr4_2:16853513-16853532 | None:intergenic | 25.0% |
| ! | TGAGCATTAATTAGGAATAT+GGG | - | chr4_2:16853677-16853696 | None:intergenic | 25.0% |
| ! | ATGAGCATTAATTAGGAATA+TGG | - | chr4_2:16853678-16853697 | None:intergenic | 25.0% |
| ! | ATACACAATCACATGTTTAT+GGG | - | chr4_2:16854009-16854028 | None:intergenic | 25.0% |
| !!! | TTCCAGTGATGTTTTTTTTT+TGG | + | chr4_2:16854056-16854075 | Msa0591890:intron | 25.0% |
| ! | TTCCAAAAAAAAAACATCAC+TGG | - | chr4_2:16854061-16854080 | None:intergenic | 25.0% |
| !!! | TCATCAATCAAGTTTTATCT+TGG | + | chr4_2:16854200-16854219 | Msa0591890:intron | 25.0% |
| !!! | CATCAATCAAGTTTTATCTT+GGG | + | chr4_2:16854201-16854220 | Msa0591890:intron | 25.0% |
| !!! | TGACAAAAAGTGTTGTTTAT+TGG | + | chr4_2:16854236-16854255 | Msa0591890:intron | 25.0% |
| ! | AGTTATTTATCCAAATGCAA+TGG | - | chr4_2:16854274-16854293 | None:intergenic | 25.0% |
| ! | ATTTGGATAAATAACTGTGT+CGG | + | chr4_2:16854278-16854297 | Msa0591890:CDS | 25.0% |
| !! | CTTCCTTTTGATATTTTTCA+TGG | + | chr4_2:16854477-16854496 | Msa0591890:intron | 25.0% |
| ! | AGACCATGAAAAATATCAAA+AGG | - | chr4_2:16854483-16854502 | None:intergenic | 25.0% |
| !!! | CATGAAATAAACTTTTTTGC+AGG | + | chr4_2:16854706-16854725 | Msa0591890:intron | 25.0% |
| ! | TGATTTCGATTTACTCAATT+AGG | + | chr4_2:16854874-16854893 | Msa0591890:intron | 25.0% |
| ! | TTCATCATGATCATATCATA+TGG | + | chr4_2:16855185-16855204 | Msa0591890:intron | 25.0% |
| ! | CAATTATCACATCAATAAGA+TGG | - | chr4_2:16855303-16855322 | None:intergenic | 25.0% |
| ! | CTTATTGATGTGATAATTGA+CGG | + | chr4_2:16855304-16855323 | Msa0591890:intron | 25.0% |
| !!! | TTCTTTTGTATTCTGAAATC+AGG | + | chr4_2:16855330-16855349 | Msa0591890:intron | 25.0% |
| !!! | ATAGTAATGTGCTATTTGAT+TGG | - | chr4_2:16855495-16855514 | None:intergenic | 25.0% |
| !!! | GTTTATTTTTTTGCAGGTTT+TGG | + | chr4_2:16855761-16855780 | Msa0591890:intron | 25.0% |
| !!! | GTTAAAAAGGCATTGAATTT+GGG | - | chr4_2:16855989-16856008 | None:intergenic | 25.0% |
| ! | TATACATTACATAATTGCCT+CGG | - | chr4_2:16856069-16856088 | None:intergenic | 25.0% |
| ! | CTAATCTATGTCTAACAAAT+GGG | - | chr4_2:16856124-16856143 | None:intergenic | 25.0% |
| !! | CGTTTTTCTTTTTGTACATT+AGG | - | chr4_2:16856231-16856250 | None:intergenic | 25.0% |
| !! | TAAGATACAACTTTTCACAA+TGG | - | chr4_2:16856286-16856305 | None:intergenic | 25.0% |
| TCTATCAATGAAGACAAAGA+CGG | - | chr4_2:16851654-16851673 | None:intergenic | 30.0% | |
| TCTTTGTCTTCATTGATAGA+TGG | + | chr4_2:16851654-16851673 | Msa0591890:CDS | 30.0% | |
| ! | TTGCGTTTGATTTCATGAAT+AGG | - | chr4_2:16851830-16851849 | None:intergenic | 30.0% |
| TATTCATGAAATCAAACGCA+AGG | + | chr4_2:16851829-16851848 | Msa0591890:CDS | 30.0% | |
| CATTAAGCTCGTATAAAACT+TGG | - | chr4_2:16851999-16852018 | None:intergenic | 30.0% | |
| GGTCAATCAATAATAACCAA+TGG | - | chr4_2:16852187-16852206 | None:intergenic | 30.0% | |
| ACGTCGGAATTATTGAATAT+CGG | - | chr4_2:16852208-16852227 | None:intergenic | 30.0% | |
| !! | TTTGTTATGTGGTGAGTTTT+TGG | + | chr4_2:16852362-16852381 | Msa0591890:intron | 30.0% |
| ! | TGTTAATGTAGTCTTGATCA+AGG | + | chr4_2:16852573-16852592 | Msa0591890:intron | 30.0% |
| ! | TATACCGCAACAATATTTTG+GGG | - | chr4_2:16852941-16852960 | None:intergenic | 30.0% |
| ! | CTATACCGCAACAATATTTT+GGG | - | chr4_2:16852942-16852961 | None:intergenic | 30.0% |
| AAAATATTGTTGCGGTATAG+CGG | + | chr4_2:16852942-16852961 | Msa0591890:intron | 30.0% | |
| CGTATTGTTTCCTTAATCTT+CGG | - | chr4_2:16852988-16853007 | None:intergenic | 30.0% | |
| AACTGATCCAAAATAAACTG+AGG | + | chr4_2:16853045-16853064 | Msa0591890:intron | 30.0% | |
| TCCAAAATAAACTGAGGTAA+TGG | + | chr4_2:16853051-16853070 | Msa0591890:intron | 30.0% | |
| ! | TATAAGTTGAGGGCATATTT+GGG | + | chr4_2:16853075-16853094 | Msa0591890:intron | 30.0% |
| TTGTTTAGTAGTGACTGTAT+TGG | - | chr4_2:16853137-16853156 | None:intergenic | 30.0% | |
| GTTGTGTTTGTATTTGAGAA+AGG | + | chr4_2:16853232-16853251 | Msa0591890:intron | 30.0% | |
| ACTAGTGAAGGAAAACAAAA+AGG | - | chr4_2:16853465-16853484 | None:intergenic | 30.0% | |
| CTCATAGGTAATTAGGAATA+TGG | - | chr4_2:16853514-16853533 | None:intergenic | 30.0% | |
| AGTCATACTCATAGGTAATT+AGG | - | chr4_2:16853521-16853540 | None:intergenic | 30.0% | |
| AACACATTAGTCATACTCAT+AGG | - | chr4_2:16853529-16853548 | None:intergenic | 30.0% | |
| TATGAGTATGACTAATGTGT+TGG | + | chr4_2:16853528-16853547 | Msa0591890:intron | 30.0% | |
| !! | TTCAATATGTTTGGTTTGAC+TGG | + | chr4_2:16853563-16853582 | Msa0591890:intron | 30.0% |
| !! | TCAATATGTTTGGTTTGACT+GGG | + | chr4_2:16853564-16853583 | Msa0591890:intron | 30.0% |
| TGGAAAAATATCAGCTTCTA+GGG | - | chr4_2:16853610-16853629 | None:intergenic | 30.0% | |
| ! | TGATATTTTTCCACAGACTA+AGG | + | chr4_2:16853617-16853636 | Msa0591890:intron | 30.0% |
| AAAAGTAAAACCTTAGTCTG+TGG | - | chr4_2:16853630-16853649 | None:intergenic | 30.0% | |
| GAATATGGGCTTAATTAACT+AGG | - | chr4_2:16853663-16853682 | None:intergenic | 30.0% | |
| TGTTATATTAAGTGAGCCAT+TGG | - | chr4_2:16853924-16853943 | None:intergenic | 30.0% | |
| GATACACAATCACATGTTTA+TGG | - | chr4_2:16854010-16854029 | None:intergenic | 30.0% | |
| ! | CACTGGAAAGTTAATTTTCA+TGG | - | chr4_2:16854044-16854063 | None:intergenic | 30.0% |
| TAAAAGATGTGTTCTACGAA+TGG | + | chr4_2:16854162-16854181 | Msa0591890:CDS | 30.0% | |
| !! | AAGTTTTATCTTGGGCTTTT+TGG | + | chr4_2:16854209-16854228 | Msa0591890:intron | 30.0% |
| !! | AGTGTTGTTTATTGGTTGTA+AGG | + | chr4_2:16854244-16854263 | Msa0591890:intron | 30.0% |
| AAGGAAGAGAAAACTAAATC+AGG | - | chr4_2:16854464-16854483 | None:intergenic | 30.0% | |
| ! | TCAATGTTGCTTAACTTTGT+AGG | + | chr4_2:16854545-16854564 | Msa0591890:intron | 30.0% |
| ! | ACTTTGTAGGTTTTACTTGT+TGG | + | chr4_2:16854558-16854577 | Msa0591890:intron | 30.0% |
| ATACACGATGAAGACAAAAA+TGG | + | chr4_2:16854600-16854619 | Msa0591890:CDS | 30.0% | |
| !! | CATTATGTGTTCTTTTAGGA+TGG | + | chr4_2:16854765-16854784 | Msa0591890:CDS | 30.0% |
| TGAGTAAATCGAAATCATTC+TGG | - | chr4_2:16854871-16854890 | None:intergenic | 30.0% | |
| TATAAACATCCATATGACCT+TGG | + | chr4_2:16854963-16854982 | Msa0591890:CDS | 30.0% | |
| ACAGATGTCAAATTCTCATA+CGG | - | chr4_2:16854990-16855009 | None:intergenic | 30.0% | |
| AGTTCAATGAGAAAAAAGCA+GGG | - | chr4_2:16855074-16855093 | None:intergenic | 30.0% | |
| AAGTTCAATGAGAAAAAAGC+AGG | - | chr4_2:16855075-16855094 | None:intergenic | 30.0% | |
| CTCATTGAACTTCATTCATT+TGG | + | chr4_2:16855083-16855102 | Msa0591890:intron | 30.0% | |
| ! | TTTTCCTTTCTGCAATCATT+TGG | + | chr4_2:16855110-16855129 | Msa0591890:intron | 30.0% |
| AACGCTTTCAAATAATAGCT+AGG | - | chr4_2:16855255-16855274 | None:intergenic | 30.0% | |
| AACATAATTCAACTCAACTG+AGG | + | chr4_2:16855276-16855295 | Msa0591890:intron | 30.0% | |
| GTTTCACATAATCAGTTAAG+CGG | - | chr4_2:16855534-16855553 | None:intergenic | 30.0% | |
| GATACTATAATCAGATGTGA+AGG | + | chr4_2:16855572-16855591 | Msa0591890:intron | 30.0% | |
| ! | ACATCTAAGTGAAGTTTTCA+CGG | + | chr4_2:16855879-16855898 | Msa0591890:exon | 30.0% |
| !! | CGTTAAAAAGGCATTGAATT+TGG | - | chr4_2:16855990-16856009 | None:intergenic | 30.0% |
| !! | GTTGGTGATTTACGTTAAAA+AGG | - | chr4_2:16856002-16856021 | None:intergenic | 30.0% |
| ATACATTACATAATTGCCTC+GGG | - | chr4_2:16856068-16856087 | None:intergenic | 30.0% | |
| CCTAATCTATGTCTAACAAA+TGG | - | chr4_2:16856125-16856144 | None:intergenic | 30.0% | |
| ! | CCATTTGTTAGACATAGATT+AGG | + | chr4_2:16856122-16856141 | Msa0591890:three_prime_UTR | 30.0% |
| GTCTTCATTGATAGATGGTT+TGG | + | chr4_2:16851659-16851678 | Msa0591890:CDS | 35.0% | |
| GATCGGTGAAAATAGCTAAA+CGG | - | chr4_2:16851757-16851776 | None:intergenic | 35.0% | |
| !! | TTTAGCTATTTTCACCGATC+CGG | + | chr4_2:16851757-16851776 | Msa0591890:intron | 35.0% |
| !!! | TTTTTGTTGTTAATCTGCGG+TGG | + | chr4_2:16852506-16852525 | Msa0591890:intron | 35.0% |
| CTTAACCTATCCAGCTAAAA+GGG | - | chr4_2:16852539-16852558 | None:intergenic | 35.0% | |
| TGGATAGGTTAAGCAATAGT+AGG | + | chr4_2:16852546-16852565 | Msa0591890:intron | 35.0% | |
| !! | TGTAGTCTTGATCAAGGTTT+TGG | + | chr4_2:16852579-16852598 | Msa0591890:intron | 35.0% |
| GCGGTTACTTCATAATTCTT+AGG | + | chr4_2:16852617-16852636 | Msa0591890:intron | 35.0% | |
| !! | AAAAACATCATGATAGTGGG+AGG | - | chr4_2:16852736-16852755 | None:intergenic | 35.0% |
| !! | ATACCGCAACAATATTTTGG+GGG | - | chr4_2:16852940-16852959 | None:intergenic | 35.0% |
| ! | GCTATACCGCAACAATATTT+TGG | - | chr4_2:16852943-16852962 | None:intergenic | 35.0% |
| AAATATTGTTGCGGTATAGC+GGG | + | chr4_2:16852943-16852962 | Msa0591890:intron | 35.0% | |
| ! | GCCATTACCTCAGTTTATTT+TGG | - | chr4_2:16853055-16853074 | None:intergenic | 35.0% |
| ! | AGGTAATGGCTATAAGTTGA+GGG | + | chr4_2:16853065-16853084 | Msa0591890:intron | 35.0% |
| ! | CTATAAGTTGAGGGCATATT+TGG | + | chr4_2:16853074-16853093 | Msa0591890:intron | 35.0% |
| ! | ATAAGTTGAGGGCATATTTG+GGG | + | chr4_2:16853076-16853095 | Msa0591890:intron | 35.0% |
| TTAATCTGCATGATCAACAG+TGG | - | chr4_2:16853196-16853215 | None:intergenic | 35.0% | |
| ! | ATGTCATGTGTTGATGTGTT+TGG | + | chr4_2:16853292-16853311 | Msa0591890:intron | 35.0% |
| TAGGAATATAACGCAACAGA+AGG | - | chr4_2:16853318-16853337 | None:intergenic | 35.0% | |
| ! | AAAATGCTAACTAGTTTCCC+TGG | + | chr4_2:16853340-16853359 | Msa0591890:intron | 35.0% |
| ! | AAATGCTAACTAGTTTCCCT+GGG | + | chr4_2:16853341-16853360 | Msa0591890:intron | 35.0% |
| GGAAAAATATCAGCTTCTAG+GGG | - | chr4_2:16853609-16853628 | None:intergenic | 35.0% | |
| GTGGAAAAATATCAGCTTCT+AGG | - | chr4_2:16853611-16853630 | None:intergenic | 35.0% | |
| CCAGCATATGAGCATTAATT+AGG | - | chr4_2:16853685-16853704 | None:intergenic | 35.0% | |
| CCTAATTAATGCTCATATGC+TGG | + | chr4_2:16853682-16853701 | Msa0591890:intron | 35.0% | |
| !!! | TCATATGCTGGCTTTTAAAG+TGG | + | chr4_2:16853694-16853713 | Msa0591890:intron | 35.0% |
| GTAAAGATGACCTCTTTCAA+GGG | - | chr4_2:16853743-16853762 | None:intergenic | 35.0% | |
| AGTAAAGATGACCTCTTTCA+AGG | - | chr4_2:16853744-16853763 | None:intergenic | 35.0% | |
| TATCCATACCACATCAAATG+CGG | - | chr4_2:16853814-16853833 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGGAACTGTGAGC+AGG | + | chr4_2:16854069-16854088 | Msa0591890:intron | 35.0% |
| !!! | TTTTTTTGGAACTGTGAGCA+GGG | + | chr4_2:16854070-16854089 | Msa0591890:intron | 35.0% |
| ATTTGCGTGAATGAAATCTG+TGG | + | chr4_2:16854438-16854457 | Msa0591890:intron | 35.0% | |
| !!! | ACTTTTTTGCAGGTTGTTTC+TGG | + | chr4_2:16854716-16854735 | Msa0591890:intron | 35.0% |
| !!! | CTTTTTTGCAGGTTGTTTCT+GGG | + | chr4_2:16854717-16854736 | Msa0591890:intron | 35.0% |
| ACATAACAATACCACGATAG+AGG | + | chr4_2:16854805-16854824 | Msa0591890:CDS | 35.0% | |
| ACTCAATTAGGAAGTTGTGT+TGG | + | chr4_2:16854886-16854905 | Msa0591890:intron | 35.0% | |
| ! | TTGTGTTGGCAGTATTATGA+AGG | + | chr4_2:16854900-16854919 | Msa0591890:intron | 35.0% |
| CAGATGTCAAATTCTCATAC+GGG | - | chr4_2:16854989-16855008 | None:intergenic | 35.0% | |
| ATGACCAAATGATTGCAGAA+AGG | - | chr4_2:16855117-16855136 | None:intergenic | 35.0% | |
| ACCTTTAGTGAGATCATAGA+CGG | - | chr4_2:16855853-16855872 | None:intergenic | 35.0% | |
| !!! | TTGTTAGGTTTTGGATGATG+TGG | + | chr4_2:16856176-16856195 | Msa0591890:three_prime_UTR | 35.0% |
| !!! | TGTTAGGTTTTGGATGATGT+GGG | + | chr4_2:16856177-16856196 | Msa0591890:three_prime_UTR | 35.0% |
| AAAAGAAAAACGGCTCATCA+AGG | + | chr4_2:16856239-16856258 | Msa0591890:three_prime_UTR | 35.0% | |
| AGCGATTGATGAAATGACGA+CGG | - | chr4_2:16851615-16851634 | None:intergenic | 40.0% | |
| ATCAATGAAGACAAAGACGG+TGG | - | chr4_2:16851651-16851670 | None:intergenic | 40.0% | |
| !! | TTTGGTCTTTTCTCTTCTCC+TGG | + | chr4_2:16851677-16851696 | Msa0591890:CDS | 40.0% |
| AACACACATGAAAGCGATGA+CGG | - | chr4_2:16851726-16851745 | None:intergenic | 40.0% | |
| !! | TTAGCTATTTTCACCGATCC+GGG | + | chr4_2:16851758-16851777 | Msa0591890:intron | 40.0% |
| ACATCAGGCGTATAAGTAGA+CGG | - | chr4_2:16851791-16851810 | None:intergenic | 40.0% | |
| !! | TGTGGTGAGTTTTTGGAAGT+TGG | + | chr4_2:16852369-16852388 | Msa0591890:intron | 40.0% |
| GCTTAACCTATCCAGCTAAA+AGG | - | chr4_2:16852540-16852559 | None:intergenic | 40.0% | |
| GTGTAATTCTTGCGTTTCCT+AGG | + | chr4_2:16852764-16852783 | Msa0591890:intron | 40.0% | |
| CAACCCCCAAAATATTGTTG+CGG | + | chr4_2:16852934-16852953 | Msa0591890:intron | 40.0% | |
| ! | TTCCTTAATCTTCGGTGTAG+CGG | - | chr4_2:16852980-16852999 | None:intergenic | 40.0% |
| ! | GAGGTAATGGCTATAAGTTG+AGG | + | chr4_2:16853064-16853083 | Msa0591890:intron | 40.0% |
| !! | GGCATATTTGGGGTTTTTAC+CGG | + | chr4_2:16853086-16853105 | Msa0591890:intron | 40.0% |
| TTACCGGAGTTTCATTGTAG+TGG | + | chr4_2:16853102-16853121 | Msa0591890:intron | 40.0% | |
| !! | AGTGACTGTATTGGCTAGTA+TGG | - | chr4_2:16853128-16853147 | None:intergenic | 40.0% |
| ACTAAACAAACGCAGCACAA+TGG | + | chr4_2:16853148-16853167 | Msa0591890:intron | 40.0% | |
| CTAAACAAACGCAGCACAAT+GGG | + | chr4_2:16853149-16853168 | Msa0591890:intron | 40.0% | |
| TAAACAAACGCAGCACAATG+GGG | + | chr4_2:16853150-16853169 | Msa0591890:intron | 40.0% | |
| ! | AATGCTAACTAGTTTCCCTG+GGG | + | chr4_2:16853342-16853361 | Msa0591890:intron | 40.0% |
| !! | AAAGTGGACTGTCGTATATG+CGG | + | chr4_2:16853710-16853729 | Msa0591890:intron | 40.0% |
| GACAATGTTGTATACGAGTC+TGG | + | chr4_2:16853770-16853789 | Msa0591890:intron | 40.0% | |
| TGTATACGAGTCTGGCTATA+AGG | + | chr4_2:16853778-16853797 | Msa0591890:intron | 40.0% | |
| ATACTAACCCGCATTTGATG+TGG | + | chr4_2:16853803-16853822 | Msa0591890:intron | 40.0% | |
| ATCCATACCACATCAAATGC+GGG | - | chr4_2:16853813-16853832 | None:intergenic | 40.0% | |
| !!! | GCTTATAGTGAGAGCACTTT+TGG | - | chr4_2:16854114-16854133 | None:intergenic | 40.0% |
| ! | GAACACATCTTTTACAACCC+CGG | - | chr4_2:16854156-16854175 | None:intergenic | 40.0% |
| GTAAGGATCACCATTGCATT+TGG | + | chr4_2:16854261-16854280 | Msa0591890:intron | 40.0% | |
| ACATACCATGGAGTAAATGC+AGG | - | chr4_2:16854354-16854373 | None:intergenic | 40.0% | |
| TCATTCACGCAAATACAACG+TGG | - | chr4_2:16854432-16854451 | None:intergenic | 40.0% | |
| ATGGTCTGTGCTAGATTTGA+TGG | + | chr4_2:16854496-16854515 | Msa0591890:intron | 40.0% | |
| !! | GTTGGTAGTCTAGCTTATGA+TGG | + | chr4_2:16854576-16854595 | Msa0591890:CDS | 40.0% |
| CACGATGAAGACAAAAATGG+CGG | + | chr4_2:16854603-16854622 | Msa0591890:CDS | 40.0% | |
| CAATGAGAAAAAAGCAGGGT+GGG | - | chr4_2:16855070-16855089 | None:intergenic | 40.0% | |
| TCAATGAGAAAAAAGCAGGG+TGG | - | chr4_2:16855071-16855090 | None:intergenic | 40.0% | |
| GCTGATCAGTGAAAAAGTCA+TGG | - | chr4_2:16855233-16855252 | None:intergenic | 40.0% | |
| ACCTAAGTCCAGAACCTATA+TGG | - | chr4_2:16855824-16855843 | None:intergenic | 40.0% | |
| TAGTGAGATCATAGACGGTT+CGG | - | chr4_2:16855848-16855867 | None:intergenic | 40.0% | |
| ACCGTCTATGATCTCACTAA+AGG | + | chr4_2:16855849-16855868 | Msa0591890:CDS | 40.0% | |
| ACCAACAATTGCTGAAGTGT+AGG | + | chr4_2:16856016-16856035 | Msa0591890:intron | 40.0% | |
| ACCTACACTTCAGCAATTGT+TGG | - | chr4_2:16856020-16856039 | None:intergenic | 40.0% | |
| ACCTAACAAGACTGGAAGAT+GGG | - | chr4_2:16856165-16856184 | None:intergenic | 40.0% | |
| AACCTAACAAGACTGGAAGA+TGG | - | chr4_2:16856166-16856185 | None:intergenic | 40.0% | |
| !!! | CTTCCAGTCTTGTTAGGTTT+TGG | + | chr4_2:16856167-16856186 | Msa0591890:three_prime_UTR | 40.0% |
| CATCCAAAACCTAACAAGAC+TGG | - | chr4_2:16856173-16856192 | None:intergenic | 40.0% | |
| !!! | GTTAGGTTTTGGATGATGTG+GGG | + | chr4_2:16856178-16856197 | Msa0591890:three_prime_UTR | 40.0% |
| TTGGATGAAATGTGCTGTCA+AGG | + | chr4_2:16856331-16856350 | Msa0591890:three_prime_UTR | 40.0% | |
| TGGATGAAATGTGCTGTCAA+GGG | + | chr4_2:16856332-16856351 | Msa0591890:three_prime_UTR | 40.0% | |
| GATGAAATGACGACGGTTAC+CGG | - | chr4_2:16851608-16851627 | None:intergenic | 45.0% | |
| ATGAGCTACGACAAATCACG+TGG | + | chr4_2:16852036-16852055 | Msa0591890:intron | 45.0% | |
| ! | TGGAATGCTTCCCTTTTAGC+TGG | + | chr4_2:16852526-16852545 | Msa0591890:intron | 45.0% |
| !! | TGCTTCCCTTTTAGCTGGAT+AGG | + | chr4_2:16852531-16852550 | Msa0591890:intron | 45.0% |
| !! | TGATCAAGGTTTTGGCAGCT+TGG | + | chr4_2:16852587-16852606 | Msa0591890:intron | 45.0% |
| !! | AACATCATGATAGTGGGAGG+TGG | - | chr4_2:16852733-16852752 | None:intergenic | 45.0% |
| TTGAGCGAAGACTAACACCT+AGG | - | chr4_2:16852784-16852803 | None:intergenic | 45.0% | |
| !! | CGCAACAATATTTTGGGGGT+TGG | - | chr4_2:16852936-16852955 | None:intergenic | 45.0% |
| TGGCCACTACAATGAAACTC+CGG | - | chr4_2:16853108-16853127 | None:intergenic | 45.0% | |
| CATGATCAACAGTGGCACTT+AGG | - | chr4_2:16853188-16853207 | None:intergenic | 45.0% | |
| ATTCCTTAACTAGTGCCCCA+GGG | - | chr4_2:16853360-16853379 | None:intergenic | 45.0% | |
| AACCCGCATTTGATGTGGTA+TGG | + | chr4_2:16853808-16853827 | Msa0591890:intron | 45.0% | |
| ACTTCGTTGAACCATTCACG+TGG | + | chr4_2:16853948-16853967 | Msa0591890:intron | 45.0% | |
| ACCATTCACGTGGCAGAAAA+AGG | + | chr4_2:16853958-16853977 | Msa0591890:intron | 45.0% | |
| ! | TCCTTTTTCTGCCACGTGAA+TGG | - | chr4_2:16853962-16853981 | None:intergenic | 45.0% |
| GATTGCCTGCATTTACTCCA+TGG | + | chr4_2:16854346-16854365 | Msa0591890:CDS | 45.0% | |
| TCACGCAAATACAACGTGGT+AGG | - | chr4_2:16854428-16854447 | None:intergenic | 45.0% | |
| GCATGTCATAACCTCTATCG+TGG | - | chr4_2:16854819-16854838 | None:intergenic | 45.0% | |
| ATGAAGGAGTGAGAGCTTTG+TGG | + | chr4_2:16854916-16854935 | Msa0591890:CDS | 45.0% | |
| ! | AGCTTTGTGGCTTCAAGAGA+AGG | + | chr4_2:16854929-16854948 | Msa0591890:CDS | 45.0% |
| GCTTTGTGGCTTCAAGAGAA+GGG | + | chr4_2:16854930-16854949 | Msa0591890:CDS | 45.0% | |
| TCAAATTCTCATACGGGCCA+AGG | - | chr4_2:16854983-16855002 | None:intergenic | 45.0% | |
| TCAGATGTGAAGGTGACAGA+TGG | + | chr4_2:16855582-16855601 | Msa0591890:intron | 45.0% | |
| TGGGACCAAATATCCTTAGC+TGG | + | chr4_2:16855781-16855800 | Msa0591890:CDS | 45.0% | |
| CACAGCCAGCTAAGGATATT+TGG | - | chr4_2:16855789-16855808 | None:intergenic | 45.0% | |
| CAAATATCCTTAGCTGGCTG+TGG | + | chr4_2:16855787-16855806 | Msa0591890:CDS | 45.0% | |
| !! | GAACCTATATGGCTTGCTGT+TGG | - | chr4_2:16855813-16855832 | None:intergenic | 45.0% |
| ACAGCAAGCCATATAGGTTC+TGG | + | chr4_2:16855813-16855832 | Msa0591890:CDS | 45.0% | |
| !! | GCCATATAGGTTCTGGACTT+AGG | + | chr4_2:16855820-16855839 | Msa0591890:CDS | 45.0% |
| CCTAACAAGACTGGAAGATG+GGG | - | chr4_2:16856164-16856183 | None:intergenic | 45.0% | |
| !! | GCTCATCAAGGTGCTGTAAA+GGG | + | chr4_2:16856251-16856270 | Msa0591890:three_prime_UTR | 45.0% |
| ACGACGGCGTTTATGATTCC+AGG | - | chr4_2:16851698-16851717 | None:intergenic | 50.0% | |
| ! | AGCGATGACGGTGAAAACGA+CGG | - | chr4_2:16851714-16851733 | None:intergenic | 50.0% |
| ! | CTATTTTCACCGATCCGGGT+CGG | + | chr4_2:16851762-16851781 | Msa0591890:CDS | 50.0% |
| ! | TATTTTCACCGATCCGGGTC+GGG | + | chr4_2:16851763-16851782 | Msa0591890:CDS | 50.0% |
| TTCATGAGCTGTCAGCTCAG+TGG | - | chr4_2:16852267-16852286 | None:intergenic | 50.0% | |
| !! | ATCATGATAGTGGGAGGTGG+CGG | - | chr4_2:16852730-16852749 | None:intergenic | 50.0% |
| GCGCATCAGTTGTACTCAAC+TGG | - | chr4_2:16852844-16852863 | None:intergenic | 50.0% | |
| AACTGATGCGCGCACATTTG+TGG | + | chr4_2:16852853-16852872 | Msa0591890:intron | 50.0% | |
| ! | TATTGTTGCGGTATAGCGGG+TGG | + | chr4_2:16852946-16852965 | Msa0591890:intron | 50.0% |
| ! | TTTCCCTGGGGCACTAGTTA+AGG | + | chr4_2:16853354-16853373 | Msa0591890:intron | 50.0% |
| GATTCCTTAACTAGTGCCCC+AGG | - | chr4_2:16853361-16853380 | None:intergenic | 50.0% | |
| ! | GTTTTCCTTCACTAGTGCCC+CGG | + | chr4_2:16853469-16853488 | Msa0591890:intron | 50.0% |
| ! | TTTTCCTTCACTAGTGCCCC+GGG | + | chr4_2:16853470-16853489 | Msa0591890:intron | 50.0% |
| CGGTTGTCTTCCCTTGAAAG+AGG | + | chr4_2:16853730-16853749 | Msa0591890:intron | 50.0% | |
| !!! | TTTTGGAACTGTGAGCAGGG+TGG | + | chr4_2:16854073-16854092 | Msa0591890:intron | 50.0% |
| !! | GGTTGTTTCTGGGCTCTTAC+TGG | + | chr4_2:16854727-16854746 | Msa0591890:intron | 50.0% |
| TTGTGGCTTCAAGAGAAGGG+TGG | + | chr4_2:16854933-16854952 | Msa0591890:CDS | 50.0% | |
| TGTGGCTTCAAGAGAAGGGT+GGG | + | chr4_2:16854934-16854953 | Msa0591890:CDS | 50.0% | |
| TCATACGGGCCAAGGTCATA+TGG | - | chr4_2:16854975-16854994 | None:intergenic | 50.0% | |
| AGCAGGGTGGGAGAAAAAAC+AGG | - | chr4_2:16855058-16855077 | None:intergenic | 50.0% | |
| TGGCCAACAGCAAGCCATAT+AGG | + | chr4_2:16855807-16855826 | Msa0591890:CDS | 50.0% | |
| ! | GTTTTCACGGTGCTTTGCAG+TGG | + | chr4_2:16855892-16855911 | Msa0591890:three_prime_UTR | 50.0% |
| CTCGGGTATATGCAGCAAAC+AGG | - | chr4_2:16856051-16856070 | None:intergenic | 50.0% | |
| ! | CTGTTTGCTGCATATACCCG+AGG | + | chr4_2:16856049-16856068 | Msa0591890:three_prime_UTR | 50.0% |
| CAAGACTGGAAGATGGGGAA+AGG | - | chr4_2:16856159-16856178 | None:intergenic | 50.0% | |
| !! | CCCCATCTTCCAGTCTTGTT+AGG | + | chr4_2:16856161-16856180 | Msa0591890:three_prime_UTR | 50.0% |
| !! | GGCTCATCAAGGTGCTGTAA+AGG | + | chr4_2:16856250-16856269 | Msa0591890:three_prime_UTR | 50.0% |
| GAGAAAGCGAAGCAGCAACG+CGG | + | chr4_2:16851557-16851576 | Msa0591890:CDS | 55.0% | |
| TAAGTAGACGGAACCCGACC+CGG | - | chr4_2:16851779-16851798 | None:intergenic | 55.0% | |
| TTGGCAGCTTGGCAGTGTTG+CGG | + | chr4_2:16852598-16852617 | Msa0591890:intron | 55.0% | |
| !! | AGGTGGCGGAAATCAGGTTG+CGG | - | chr4_2:16852716-16852735 | None:intergenic | 55.0% |
| ACTCTGTGGCTGCAACGTCA+AGG | - | chr4_2:16852908-16852927 | None:intergenic | 55.0% | |
| GGCCGCTACACCGAAGATTA+AGG | + | chr4_2:16852975-16852994 | Msa0591890:intron | 55.0% | |
| TTTCCTTCACTAGTGCCCCG+GGG | + | chr4_2:16853471-16853490 | Msa0591890:intron | 55.0% | |
| TCATGCTAACTAGTGCCCCC+GGG | - | chr4_2:16853490-16853509 | None:intergenic | 55.0% | |
| GTCATGCTAACTAGTGCCCC+CGG | - | chr4_2:16853491-16853510 | None:intergenic | 55.0% | |
| GTGAGCAGGGTGGAGATTTG+AGG | + | chr4_2:16854083-16854102 | Msa0591890:intron | 55.0% | |
| AACCCCGGCAATGATGTGCA+CGG | - | chr4_2:16854141-16854160 | None:intergenic | 55.0% | |
| ! | CGGTGCTTTGCAGTGGACTT+TGG | + | chr4_2:16855899-16855918 | Msa0591890:three_prime_UTR | 55.0% |
| AAAGCGAAGCAGCAACGCGG+CGG | + | chr4_2:16851560-16851579 | Msa0591890:CDS | 60.0% | |
| CGGCTTCGCGTTCTCGTTTC+CGG | + | chr4_2:16851586-16851605 | Msa0591890:CDS | 60.0% | |
| ! | GGCGGAAATCAGGTTGCGGT+TGG | - | chr4_2:16852712-16852731 | None:intergenic | 60.0% |
| !! | AGTGGGAGGTGGCGGAAATC+AGG | - | chr4_2:16852722-16852741 | None:intergenic | 60.0% |
| ! | GGGGGTTGGCAGATACTCTG+TGG | - | chr4_2:16852922-16852941 | None:intergenic | 60.0% |
| ! | TCTTCGGTGTAGCGGCCGTA+CGG | - | chr4_2:16852972-16852991 | None:intergenic | 60.0% |
| TTCCTTCACTAGTGCCCCGG+GGG | + | chr4_2:16853472-16853491 | Msa0591890:intron | 60.0% | |
| CATGCTAACTAGTGCCCCCG+GGG | - | chr4_2:16853489-16853508 | None:intergenic | 60.0% | |
| CTCCCCGTGCACATCATTGC+CGG | + | chr4_2:16854134-16854153 | Msa0591890:CDS | 60.0% | |
| TCCCCGTGCACATCATTGCC+GGG | + | chr4_2:16854135-16854154 | Msa0591890:CDS | 60.0% | |
| ACCCCGGCAATGATGTGCAC+GGG | - | chr4_2:16854140-16854159 | None:intergenic | 60.0% | |
| CTGTTGGCCACAGCCAGCTA+AGG | - | chr4_2:16855797-16855816 | None:intergenic | 60.0% | |
| AGACGGAACCCGACCCGGAT+CGG | - | chr4_2:16851774-16851793 | None:intergenic | 65.0% | |
| !! | CGGTATAGCGGGTGGCCGTA+CGG | + | chr4_2:16852954-16852973 | Msa0591890:intron | 65.0% |
| CGGCAATGATGTGCACGGGG+AGG | - | chr4_2:16854136-16854155 | None:intergenic | 65.0% | |
| CCCCGGCAATGATGTGCACG+GGG | - | chr4_2:16854139-16854158 | None:intergenic | 65.0% | |
| CCCCGTGCACATCATTGCCG+GGG | + | chr4_2:16854136-16854155 | Msa0591890:CDS | 65.0% | |
| ! | TGCCCCCGGGGCACTAGTGA+AGG | - | chr4_2:16853477-16853496 | None:intergenic | 70.0% |
| GCGAAGCAGCAACGCGGCGG+CGG | + | chr4_2:16851563-16851582 | Msa0591890:CDS | 75.0% | |
| AAGCAGCAACGCGGCGGCGG+CGG | + | chr4_2:16851566-16851585 | Msa0591890:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 16851551 | 16856542 | 16851551 | ID=Msa0591890;Name=Msa0591890 |
| chr4_2 | mRNA | 16851551 | 16856542 | 16851551 | ID=Msa0591890-mRNA-1;Parent=Msa0591890;Name=Msa0591890-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.87|0.77|1|0.5|0.44|9|535|291 |
| chr4_2 | exon | 16851551 | 16851755 | 16851551 | ID=Msa0591890-mRNA-1:exon:4864;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16851762 | 16851850 | 16851762 | ID=Msa0591890-mRNA-1:exon:4865;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16854091 | 16854183 | 16854091 | ID=Msa0591890-mRNA-1:exon:4866;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16854266 | 16854367 | 16854266 | ID=Msa0591890-mRNA-1:exon:4867;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16854567 | 16854644 | 16854567 | ID=Msa0591890-mRNA-1:exon:4868;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16854728 | 16854826 | 16854728 | ID=Msa0591890-mRNA-1:exon:4869;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16854912 | 16855007 | 16854912 | ID=Msa0591890-mRNA-1:exon:4870;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16855777 | 16855920 | 16855777 | ID=Msa0591890-mRNA-1:exon:4871;Parent=Msa0591890-mRNA-1 |
| chr4_2 | exon | 16856038 | 16856542 | 16856038 | ID=Msa0591890-mRNA-1:exon:4872;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16851551 | 16851755 | 16851551 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16851762 | 16851850 | 16851762 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16854091 | 16854183 | 16854091 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16854266 | 16854367 | 16854266 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16854567 | 16854644 | 16854567 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16854728 | 16854826 | 16854728 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16854912 | 16855007 | 16854912 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | CDS | 16855777 | 16855890 | 16855777 | ID=Msa0591890-mRNA-1:cds;Parent=Msa0591890-mRNA-1 |
| chr4_2 | three_prime_UTR | 16855891 | 16855920 | 16855891 | ID=Msa0591890-mRNA-1:three_prime_utr;Parent=Msa0591890-mRNA-1 |
| chr4_2 | three_prime_UTR | 16856038 | 16856542 | 16856038 | ID=Msa0591890-mRNA-1:three_prime_utr;Parent=Msa0591890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
