AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0522810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0522810 MtrunA17_Chr3g0141561 99.420 345 2 0 1 345 1 345 0.0 714
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0522810 AT5G42760.1 66.565 329 103 2 9 333 17 342 7.26e-164 461
Msa0522810 AT5G42760.2 65.432 324 105 2 9 328 13 333 6.69e-158 447

Find 111 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCCAATCACTGTAAAAT+TGG 0.235892 3_4:-76130459 None:intergenic
ATATCGTTTGAGTTGCTTAA+AGG 0.250789 3_4:+76130084 Msa0522810:CDS
TGATCCACTTGCTGCTTTGC+TGG 0.277427 3_4:+76129311 Msa0522810:CDS
AGCTTGTTGAAGAGATTTAA+TGG 0.282957 3_4:-76130568 None:intergenic
TGCCACTCTGGTTAAGGATT+TGG 0.289529 3_4:-76130215 None:intergenic
ATCATGTCTGATCAAGTAAA+TGG 0.290117 3_4:+76129126 Msa0522810:exon
TTGTACTTGGTGGAAGCTTC+TGG 0.291125 3_4:+76130649 Msa0522810:CDS
ATTGTGTGTTACACAAAATA+AGG 0.292177 3_4:-76129105 None:intergenic
CCTGTGCTTCTCTGCCATTC+GGG 0.295298 3_4:-76129470 None:intergenic
AGAGGAGCTTAAAGAGGTTT+GGG 0.296735 3_4:-76129038 None:intergenic
TCATCAAGAAGGCGAAAATA+AGG 0.305831 3_4:-76130908 None:intergenic
TCAAAGTTCTGCGCATAATA+AGG 0.306682 3_4:+76130681 Msa0522810:CDS
GCTTAAAGAGGTTTGGGGTT+GGG 0.307755 3_4:-76129032 None:intergenic
CCACTTGCTGCTTTGCTGGC+AGG 0.313162 3_4:+76129315 Msa0522810:CDS
TAGAGGAGCTTAAAGAGGTT+TGG 0.349102 3_4:-76129039 None:intergenic
GTAAAATTGGAATACTGAAT+TGG 0.351492 3_4:-76130446 None:intergenic
ATGGAAAAGCTTCAAATTGC+AGG 0.352932 3_4:+76130262 Msa0522810:CDS
GTCAGCTGCCACTCTGGTTA+AGG 0.354833 3_4:-76130221 None:intergenic
CAGTTGCATGGCGTTGGATT+GGG 0.355782 3_4:-76130341 None:intergenic
GCAGTTGCATGGCGTTGGAT+TGG 0.356550 3_4:-76130342 None:intergenic
ACCTGTGCTTCTCTGCCATT+CGG 0.360737 3_4:-76129471 None:intergenic
CAGCATGGTGTTCCGTCATC+TGG 0.362251 3_4:-76130622 None:intergenic
CACTTGCTGCTTTGCTGGCA+GGG 0.366484 3_4:+76129316 Msa0522810:CDS
AACAATGCTCGTGAAACTTC+TGG 0.370805 3_4:+76129387 Msa0522810:CDS
GGAGACCCAGATGCCCATTT+CGG 0.372976 3_4:+76130532 Msa0522810:CDS
TGACTTTGCAGAAGTCTTAG+AGG 0.381682 3_4:+76130126 Msa0522810:CDS
CATGTTCTATTCTACGAATC+AGG 0.382111 3_4:-76130719 None:intergenic
ACACAAAATAAGGGATTAAG+AGG 0.386028 3_4:-76129095 None:intergenic
AAGAGGCCGAAATGGGCATC+TGG 0.390257 3_4:-76130538 None:intergenic
GTTGCGTGGACCTGTCGAAC+AGG 0.390970 3_4:-76129207 None:intergenic
TCTGGTTAAGGATTTGGCTT+TGG 0.395848 3_4:-76130209 None:intergenic
AATTATATGATGAAGAATAA+TGG 0.398846 3_4:+76130947 Msa0522810:three_prime_UTR
ACATGTGTGAAGCCAATAGA+TGG 0.399797 3_4:-76130493 None:intergenic
TTTGGCAAGCTGACCTTTGA+AGG 0.402317 3_4:-76129251 None:intergenic
GATCATTCAAGAGGCCGAAA+TGG 0.408961 3_4:-76130546 None:intergenic
CTGTACAATTGCTACACTAT+TGG 0.408983 3_4:+76130797 Msa0522810:three_prime_UTR
CATGTAAAACTTTCACAGAT+TGG 0.409955 3_4:+76130511 Msa0522810:CDS
TGCATGTTATTTATATATAG+AGG 0.416921 3_4:-76129056 None:intergenic
AGCTTAAAGAGGTTTGGGGT+TGG 0.418278 3_4:-76129033 None:intergenic
TTGTGTGTTACACAAAATAA+GGG 0.419061 3_4:-76129104 None:intergenic
CACTATTCTGCAAGCAGCTA+AGG 0.423193 3_4:+76130156 Msa0522810:CDS
CAGGTTGTTCTCCTAGGTGC+AGG 0.437261 3_4:+76129489 Msa0522810:CDS
ACTTGCTGCTTTGCTGGCAG+GGG 0.441240 3_4:+76129317 Msa0522810:CDS
TCTTATGTCAGCTGCCACTC+TGG 0.442727 3_4:-76130227 None:intergenic
CTGACATAAGAGAAAATGAT+TGG 0.443102 3_4:+76130239 Msa0522810:CDS
GGTTTAGCTCTGGCCATGCT+TGG 0.443811 3_4:-76129161 None:intergenic
AAAGGACAGCGATGTCTTTG+AGG 0.446558 3_4:+76130102 Msa0522810:CDS
GGGTCAGTATGTAACAAGTC+TGG 0.458829 3_4:-76129186 None:intergenic
TAGCCCTTCCTGCAGCCGTT+TGG 0.463381 3_4:-76129269 None:intergenic
TCTCAGCAGTTGCATGGCGT+TGG 0.466299 3_4:-76130347 None:intergenic
TCCTTGCAGTTAGAACGCTT+TGG 0.467503 3_4:+76129415 Msa0522810:CDS
CGCAACAATTGAAAAGGAAT+GGG 0.471274 3_4:+76129224 Msa0522810:CDS
ACCATGCTGTCGCTTGTACT+TGG 0.472145 3_4:+76130636 Msa0522810:CDS
ATCATTCAAGAGGCCGAAAT+GGG 0.474174 3_4:-76130545 None:intergenic
ATAATAAGGAGTCGGTCATT+CGG 0.478792 3_4:+76130695 Msa0522810:CDS
CTTGCCAAACGGCTGCAGGA+AGG 0.480463 3_4:+76129265 Msa0522810:CDS
TTGCCAAACGGCTGCAGGAA+GGG 0.481862 3_4:+76129266 Msa0522810:CDS
TACCACAGAAGAGCACGGTC+TGG 0.483659 3_4:+76130290 Msa0522810:CDS
AGCACGGTCTGGATTCTAGA+AGG 0.484304 3_4:+76130301 Msa0522810:CDS
GAAGCACAGGTTGTTCTCCT+AGG 0.487419 3_4:+76129483 Msa0522810:CDS
TCAGCTTGCCAAACGGCTGC+AGG 0.487788 3_4:+76129261 Msa0522810:CDS
TGGTGTTCCGTCATCTGGAT+TGG 0.488532 3_4:-76130617 None:intergenic
ATAGATGGTAAAAGTTGGTC+TGG 0.488683 3_4:-76130478 None:intergenic
ACGCAACAATTGAAAAGGAA+TGG 0.493384 3_4:+76129223 Msa0522810:CDS
TGGATTGGGCGAGGTAGTAT+AGG 0.496759 3_4:-76130327 None:intergenic
ATATATAGAGGAGCTTAAAG+AGG 0.501537 3_4:-76129044 None:intergenic
ACATACTGACCCTGTTCGAC+AGG 0.504111 3_4:+76129197 Msa0522810:CDS
TTATGCGCAGAACTTTGATC+GGG 0.506535 3_4:-76130676 None:intergenic
GCAAAGCAGCAAGTGGATCA+TGG 0.508155 3_4:-76129308 None:intergenic
CCCGAATGGCAGAGAAGCAC+AGG 0.509784 3_4:+76129470 Msa0522810:CDS
CATAAGAGAAAATGATTGGA+TGG 0.512586 3_4:+76130243 Msa0522810:CDS
AAATAAGGTTCGAATAACTT+AGG 0.515854 3_4:-76130893 None:intergenic
GGTCCACGCAACAATTGAAA+AGG 0.522870 3_4:+76129218 Msa0522810:CDS
ATTATGCGCAGAACTTTGAT+CGG 0.524410 3_4:-76130677 None:intergenic
GCTTTGGTTTGATTCTAGAC+TGG 0.526315 3_4:+76129431 Msa0522810:CDS
ATGCTGTCGCTTGTACTTGG+TGG 0.529839 3_4:+76130639 Msa0522810:CDS
GGATTAAGAGGTTTGTGAAG+AGG 0.530128 3_4:-76129083 None:intergenic
ACAAGCTCCGCAACTTGCCT+AGG 0.536607 3_4:+76130584 Msa0522810:CDS
GTTCGAATAACTTAGGTCAA+AGG 0.544773 3_4:-76130886 None:intergenic
CGGCTGCAGGAAGGGCTATG+TGG 0.545627 3_4:+76129274 Msa0522810:CDS
CAATAGTGTAGCAATTGTAC+AGG 0.548574 3_4:-76130796 None:intergenic
GCATGGCGTTGGATTGGGCG+AGG 0.548828 3_4:-76130336 None:intergenic
ACTTATTCATGAAGTCTGCT+AGG 0.551456 3_4:-76130408 None:intergenic
AAGTCTGGAAGGTTTAGCTC+TGG 0.555279 3_4:-76129171 None:intergenic
AGAGGCCGAAATGGGCATCT+GGG 0.562365 3_4:-76130537 None:intergenic
GAGGAGCTTAAAGAGGTTTG+GGG 0.562575 3_4:-76129037 None:intergenic
ATTGTACAGGTGACAACACA+TGG 0.564480 3_4:-76130783 None:intergenic
AGGAATGGGATTTCCTTCAA+AGG 0.566300 3_4:+76129238 Msa0522810:CDS
AGCCAATAGATGGTAAAAGT+TGG 0.570838 3_4:-76130483 None:intergenic
CCTGCCAGCAAAGCAGCAAG+TGG 0.579542 3_4:-76129315 None:intergenic
ACCAAAGCGTTCTAACTGCA+AGG 0.581770 3_4:-76129416 None:intergenic
ATCCAGACCGTGCTCTTCTG+TGG 0.590430 3_4:-76130292 None:intergenic
GCTTGCAAGACAACCAAGCA+TGG 0.591039 3_4:+76129148 Msa0522810:CDS
TAAAATTCTCAGCAGTTGCA+TGG 0.596944 3_4:-76130353 None:intergenic
GGATTGGTTTGTAATGACCT+AGG 0.599942 3_4:-76130601 None:intergenic
CTGATTCGTAGAATAGAACA+TGG 0.603568 3_4:+76130720 Msa0522810:exon
TCAAAGGTCAGCTTGCCAAA+CGG 0.612550 3_4:+76129254 Msa0522810:CDS
ACCAAGTACAAGCGACAGCA+TGG 0.615849 3_4:-76130637 None:intergenic
GTAATGACCTAGGCAAGTTG+CGG 0.618313 3_4:-76130591 None:intergenic
GATTTAATGGATCATTCAAG+AGG 0.619216 3_4:-76130555 None:intergenic
CAGTATGTAACAAGTCTGGA+AGG 0.620530 3_4:-76129182 None:intergenic
GATGTTCTCAGTTCCCCGAA+TGG 0.621167 3_4:+76129456 Msa0522810:CDS
CTGTGCTTCTCTGCCATTCG+GGG 0.625733 3_4:-76129469 None:intergenic
TTCTGCGCATAATAAGGAGT+CGG 0.630759 3_4:+76130687 Msa0522810:CDS
CAATTGTGTCTTAACTCACA+CGG 0.633180 3_4:+76130381 Msa0522810:CDS
TTACAAACCAATCCAGATGA+CGG 0.634102 3_4:+76130610 Msa0522810:CDS
TTGCGTGGACCTGTCGAACA+GGG 0.640836 3_4:-76129206 None:intergenic
TTTCTTACCACAGAAGAGCA+CGG 0.661986 3_4:+76130285 Msa0522810:CDS
AGCCAAATCCTTAACCAGAG+TGG 0.662283 3_4:+76130213 Msa0522810:CDS
GTGTCTACAAACCTGCACCT+AGG 0.662807 3_4:-76129500 None:intergenic
GAATACTGAATTGGATAGCG+TGG 0.687583 3_4:-76130437 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTAATTCTTATTGT+TGG + chr3_4:76130759-76130778 Msa0522810:three_prime_UTR 10.0%
!!! TTTTAATTAATTCTTATTGT+TGG + chr3_4:76130759-76130778 Msa0522810:three_prime_UTR 10.0%
!! AATTATATGATGAAGAATAA+TGG + chr3_4:76130947-76130966 Msa0522810:three_prime_UTR 15.0%
!! AATTATATGATGAAGAATAA+TGG + chr3_4:76130947-76130966 Msa0522810:three_prime_UTR 15.0%
!!! TGCATGTTATTTATATATAG+AGG - chr3_4:76129059-76129078 None:intergenic 20.0%
!!! GTCTTAAAAGGTTTTAAATA+CGG - chr3_4:76129750-76129769 None:intergenic 20.0%
!! AAAAGATATCTTGTCTTAAA+AGG - chr3_4:76129762-76129781 None:intergenic 20.0%
!! TATTCTATTCCTAGTTAATT+TGG + chr3_4:76129796-76129815 Msa0522810:intron 20.0%
!! ATTCTATTCCTAGTTAATTT+GGG + chr3_4:76129797-76129816 Msa0522810:intron 20.0%
!! GAAAAATTATTTCATCAAGA+AGG - chr3_4:76130922-76130941 None:intergenic 20.0%
!!! GAAGAAAGTTACATTTTTTA+GGG - chr3_4:76131030-76131049 None:intergenic 20.0%
!!! TGAAGAAAGTTACATTTTTT+AGG - chr3_4:76131031-76131050 None:intergenic 20.0%
!!! TGCATGTTATTTATATATAG+AGG - chr3_4:76129059-76129078 None:intergenic 20.0%
!!! GTCTTAAAAGGTTTTAAATA+CGG - chr3_4:76129750-76129769 None:intergenic 20.0%
!! AAAAGATATCTTGTCTTAAA+AGG - chr3_4:76129762-76129781 None:intergenic 20.0%
!! TATTCTATTCCTAGTTAATT+TGG + chr3_4:76129796-76129815 Msa0522810:intron 20.0%
!! ATTCTATTCCTAGTTAATTT+GGG + chr3_4:76129797-76129816 Msa0522810:intron 20.0%
!! GAAAAATTATTTCATCAAGA+AGG - chr3_4:76130922-76130941 None:intergenic 20.0%
!!! GAAGAAAGTTACATTTTTTA+GGG - chr3_4:76131030-76131049 None:intergenic 20.0%
!!! TGAAGAAAGTTACATTTTTT+AGG - chr3_4:76131031-76131050 None:intergenic 20.0%
! TTGTGTGTTACACAAAATAA+GGG - chr3_4:76129107-76129126 None:intergenic 25.0%
! ATTGTGTGTTACACAAAATA+AGG - chr3_4:76129108-76129127 None:intergenic 25.0%
!! TAATTTGGGATGCAAATATT+TGG + chr3_4:76129811-76129830 Msa0522810:intron 25.0%
! GTAAAATTGGAATACTGAAT+TGG - chr3_4:76130449-76130468 None:intergenic 25.0%
!! TATTCCAATTTTACAGTGAT+TGG + chr3_4:76130455-76130474 Msa0522810:CDS 25.0%
!!! ATAGTCTTTTTCAATACAAG+AGG + chr3_4:76130843-76130862 Msa0522810:three_prime_UTR 25.0%
!!! TAGTCTTTTTCAATACAAGA+GGG + chr3_4:76130844-76130863 Msa0522810:three_prime_UTR 25.0%
! AAATAAGGTTCGAATAACTT+AGG - chr3_4:76130896-76130915 None:intergenic 25.0%
! TTGTGTGTTACACAAAATAA+GGG - chr3_4:76129107-76129126 None:intergenic 25.0%
! ATTGTGTGTTACACAAAATA+AGG - chr3_4:76129108-76129127 None:intergenic 25.0%
!! TAATTTGGGATGCAAATATT+TGG + chr3_4:76129811-76129830 Msa0522810:intron 25.0%
! GTAAAATTGGAATACTGAAT+TGG - chr3_4:76130449-76130468 None:intergenic 25.0%
!! TATTCCAATTTTACAGTGAT+TGG + chr3_4:76130455-76130474 Msa0522810:CDS 25.0%
!!! ATAGTCTTTTTCAATACAAG+AGG + chr3_4:76130843-76130862 Msa0522810:three_prime_UTR 25.0%
!!! TAGTCTTTTTCAATACAAGA+GGG + chr3_4:76130844-76130863 Msa0522810:three_prime_UTR 25.0%
! AAATAAGGTTCGAATAACTT+AGG - chr3_4:76130896-76130915 None:intergenic 25.0%
ATATATAGAGGAGCTTAAAG+AGG - chr3_4:76129047-76129066 None:intergenic 30.0%
ACACAAAATAAGGGATTAAG+AGG - chr3_4:76129098-76129117 None:intergenic 30.0%
ATCATGTCTGATCAAGTAAA+TGG + chr3_4:76129126-76129145 Msa0522810:exon 30.0%
! ACCAGAAAATTGAAGACTTT+TGG + chr3_4:76129680-76129699 Msa0522810:intron 30.0%
! CCAGAAAATTGAAGACTTTT+GGG + chr3_4:76129681-76129700 Msa0522810:intron 30.0%
! CAGAAAATTGAAGACTTTTG+GGG + chr3_4:76129682-76129701 Msa0522810:intron 30.0%
! AGAAAATTGAAGACTTTTGG+GGG + chr3_4:76129683-76129702 Msa0522810:intron 30.0%
!! AGTTTCTTGTGTGTTTTTGA+AGG - chr3_4:76129718-76129737 None:intergenic 30.0%
ATTTGCATCCCAAATTAACT+AGG - chr3_4:76129808-76129827 None:intergenic 30.0%
GATGCAAATATTTGGCAAAA+TGG + chr3_4:76129819-76129838 Msa0522810:intron 30.0%
ACAATTTAGTCGTGTCTAAA+AGG - chr3_4:76129845-76129864 None:intergenic 30.0%
TAATGATTGTTTGGGAACTT+AGG - chr3_4:76129892-76129911 None:intergenic 30.0%
! ATCATTAGACAGGACAATTT+TGG + chr3_4:76129905-76129924 Msa0522810:intron 30.0%
ATTCTTGCAAAATTTGATGC+AGG + chr3_4:76130046-76130065 Msa0522810:intron 30.0%
!! ATATCGTTTGAGTTGCTTAA+AGG + chr3_4:76130084-76130103 Msa0522810:CDS 30.0%
CTGACATAAGAGAAAATGAT+TGG + chr3_4:76130239-76130258 Msa0522810:CDS 30.0%
CATAAGAGAAAATGATTGGA+TGG + chr3_4:76130243-76130262 Msa0522810:CDS 30.0%
CATGTAAAACTTTCACAGAT+TGG + chr3_4:76130511-76130530 Msa0522810:CDS 30.0%
! GATTTAATGGATCATTCAAG+AGG - chr3_4:76130558-76130577 None:intergenic 30.0%
!! AGCTTGTTGAAGAGATTTAA+TGG - chr3_4:76130571-76130590 None:intergenic 30.0%
TATTGGCAAAAAATGCTAGA+CGG + chr3_4:76130814-76130833 Msa0522810:three_prime_UTR 30.0%
!!! AGTCTTTTTCAATACAAGAG+GGG + chr3_4:76130845-76130864 Msa0522810:three_prime_UTR 30.0%
!!! AAAGGCTATTTCTAGCTTTT+TGG - chr3_4:76130871-76130890 None:intergenic 30.0%
ATATATAGAGGAGCTTAAAG+AGG - chr3_4:76129047-76129066 None:intergenic 30.0%
ACACAAAATAAGGGATTAAG+AGG - chr3_4:76129098-76129117 None:intergenic 30.0%
ATCATGTCTGATCAAGTAAA+TGG + chr3_4:76129126-76129145 Msa0522810:exon 30.0%
! ACCAGAAAATTGAAGACTTT+TGG + chr3_4:76129680-76129699 Msa0522810:intron 30.0%
! CCAGAAAATTGAAGACTTTT+GGG + chr3_4:76129681-76129700 Msa0522810:intron 30.0%
! CAGAAAATTGAAGACTTTTG+GGG + chr3_4:76129682-76129701 Msa0522810:intron 30.0%
! AGAAAATTGAAGACTTTTGG+GGG + chr3_4:76129683-76129702 Msa0522810:intron 30.0%
!! AGTTTCTTGTGTGTTTTTGA+AGG - chr3_4:76129718-76129737 None:intergenic 30.0%
ATTTGCATCCCAAATTAACT+AGG - chr3_4:76129808-76129827 None:intergenic 30.0%
GATGCAAATATTTGGCAAAA+TGG + chr3_4:76129819-76129838 Msa0522810:intron 30.0%
ACAATTTAGTCGTGTCTAAA+AGG - chr3_4:76129845-76129864 None:intergenic 30.0%
TAATGATTGTTTGGGAACTT+AGG - chr3_4:76129892-76129911 None:intergenic 30.0%
! ATCATTAGACAGGACAATTT+TGG + chr3_4:76129905-76129924 Msa0522810:intron 30.0%
ATTCTTGCAAAATTTGATGC+AGG + chr3_4:76130046-76130065 Msa0522810:intron 30.0%
!! ATATCGTTTGAGTTGCTTAA+AGG + chr3_4:76130084-76130103 Msa0522810:CDS 30.0%
CTGACATAAGAGAAAATGAT+TGG + chr3_4:76130239-76130258 Msa0522810:CDS 30.0%
CATAAGAGAAAATGATTGGA+TGG + chr3_4:76130243-76130262 Msa0522810:CDS 30.0%
CATGTAAAACTTTCACAGAT+TGG + chr3_4:76130511-76130530 Msa0522810:CDS 30.0%
! GATTTAATGGATCATTCAAG+AGG - chr3_4:76130558-76130577 None:intergenic 30.0%
!! AGCTTGTTGAAGAGATTTAA+TGG - chr3_4:76130571-76130590 None:intergenic 30.0%
TATTGGCAAAAAATGCTAGA+CGG + chr3_4:76130814-76130833 Msa0522810:three_prime_UTR 30.0%
!!! AGTCTTTTTCAATACAAGAG+GGG + chr3_4:76130845-76130864 Msa0522810:three_prime_UTR 30.0%
!!! AAAGGCTATTTCTAGCTTTT+TGG - chr3_4:76130871-76130890 None:intergenic 30.0%
! ATTCCTTTTCAATTGTTGCG+TGG - chr3_4:76129224-76129243 None:intergenic 35.0%
ACGCAACAATTGAAAAGGAA+TGG + chr3_4:76129223-76129242 Msa0522810:CDS 35.0%
CGCAACAATTGAAAAGGAAT+GGG + chr3_4:76129224-76129243 Msa0522810:CDS 35.0%
ATAGTTATCAGAAGCTAACG+CGG + chr3_4:76129626-76129645 Msa0522810:intron 35.0%
! CCCAAAAGTCTTCAATTTTC+TGG - chr3_4:76129684-76129703 None:intergenic 35.0%
! TGTAACAGCACATTTTAGAC+AGG + chr3_4:76129862-76129881 Msa0522810:intron 35.0%
TTCCCAAACAATCATTAGAC+AGG + chr3_4:76129895-76129914 Msa0522810:intron 35.0%
GTCCTGTCTAATGATTGTTT+GGG - chr3_4:76129900-76129919 None:intergenic 35.0%
TGTCCTGTCTAATGATTGTT+TGG - chr3_4:76129901-76129920 None:intergenic 35.0%
!!! AGGACAATTTTGGAACCTTT+TGG + chr3_4:76129915-76129934 Msa0522810:intron 35.0%
TGCAAAATTTGATGCAGGAA+TGG + chr3_4:76130051-76130070 Msa0522810:intron 35.0%
ATGGAAAAGCTTCAAATTGC+AGG + chr3_4:76130262-76130281 Msa0522810:CDS 35.0%
TAAAATTCTCAGCAGTTGCA+TGG - chr3_4:76130356-76130375 None:intergenic 35.0%
CAATTGTGTCTTAACTCACA+CGG + chr3_4:76130381-76130400 Msa0522810:CDS 35.0%
ACTTATTCATGAAGTCTGCT+AGG - chr3_4:76130411-76130430 None:intergenic 35.0%
! ATAGATGGTAAAAGTTGGTC+TGG - chr3_4:76130481-76130500 None:intergenic 35.0%
! GACCAACTTTTACCATCTAT+TGG + chr3_4:76130481-76130500 Msa0522810:CDS 35.0%
AGCCAATAGATGGTAAAAGT+TGG - chr3_4:76130486-76130505 None:intergenic 35.0%
TTACAAACCAATCCAGATGA+CGG + chr3_4:76130610-76130629 Msa0522810:CDS 35.0%
ATTATGCGCAGAACTTTGAT+CGG - chr3_4:76130680-76130699 None:intergenic 35.0%
TCAAAGTTCTGCGCATAATA+AGG + chr3_4:76130681-76130700 Msa0522810:CDS 35.0%
ATAATAAGGAGTCGGTCATT+CGG + chr3_4:76130695-76130714 Msa0522810:CDS 35.0%
CATGTTCTATTCTACGAATC+AGG - chr3_4:76130722-76130741 None:intergenic 35.0%
! CTGATTCGTAGAATAGAACA+TGG + chr3_4:76130720-76130739 Msa0522810:exon 35.0%
CAATAGTGTAGCAATTGTAC+AGG - chr3_4:76130799-76130818 None:intergenic 35.0%
CTGTACAATTGCTACACTAT+TGG + chr3_4:76130797-76130816 Msa0522810:three_prime_UTR 35.0%
ATTGGCAAAAAATGCTAGAC+GGG + chr3_4:76130815-76130834 Msa0522810:three_prime_UTR 35.0%
GTTCGAATAACTTAGGTCAA+AGG - chr3_4:76130889-76130908 None:intergenic 35.0%
TCATCAAGAAGGCGAAAATA+AGG - chr3_4:76130911-76130930 None:intergenic 35.0%
!! ACGTGTTTTTGAACTGGTTT+GGG - chr3_4:76131085-76131104 None:intergenic 35.0%
! ATTCCTTTTCAATTGTTGCG+TGG - chr3_4:76129224-76129243 None:intergenic 35.0%
ACGCAACAATTGAAAAGGAA+TGG + chr3_4:76129223-76129242 Msa0522810:CDS 35.0%
CGCAACAATTGAAAAGGAAT+GGG + chr3_4:76129224-76129243 Msa0522810:CDS 35.0%
ATAGTTATCAGAAGCTAACG+CGG + chr3_4:76129626-76129645 Msa0522810:intron 35.0%
! CCCAAAAGTCTTCAATTTTC+TGG - chr3_4:76129684-76129703 None:intergenic 35.0%
! TGTAACAGCACATTTTAGAC+AGG + chr3_4:76129862-76129881 Msa0522810:intron 35.0%
TTCCCAAACAATCATTAGAC+AGG + chr3_4:76129895-76129914 Msa0522810:intron 35.0%
GTCCTGTCTAATGATTGTTT+GGG - chr3_4:76129900-76129919 None:intergenic 35.0%
TGTCCTGTCTAATGATTGTT+TGG - chr3_4:76129901-76129920 None:intergenic 35.0%
!!! AGGACAATTTTGGAACCTTT+TGG + chr3_4:76129915-76129934 Msa0522810:intron 35.0%
TGCAAAATTTGATGCAGGAA+TGG + chr3_4:76130051-76130070 Msa0522810:intron 35.0%
ATGGAAAAGCTTCAAATTGC+AGG + chr3_4:76130262-76130281 Msa0522810:CDS 35.0%
TAAAATTCTCAGCAGTTGCA+TGG - chr3_4:76130356-76130375 None:intergenic 35.0%
CAATTGTGTCTTAACTCACA+CGG + chr3_4:76130381-76130400 Msa0522810:CDS 35.0%
ACTTATTCATGAAGTCTGCT+AGG - chr3_4:76130411-76130430 None:intergenic 35.0%
! ATAGATGGTAAAAGTTGGTC+TGG - chr3_4:76130481-76130500 None:intergenic 35.0%
! GACCAACTTTTACCATCTAT+TGG + chr3_4:76130481-76130500 Msa0522810:CDS 35.0%
AGCCAATAGATGGTAAAAGT+TGG - chr3_4:76130486-76130505 None:intergenic 35.0%
TTACAAACCAATCCAGATGA+CGG + chr3_4:76130610-76130629 Msa0522810:CDS 35.0%
ATTATGCGCAGAACTTTGAT+CGG - chr3_4:76130680-76130699 None:intergenic 35.0%
TCAAAGTTCTGCGCATAATA+AGG + chr3_4:76130681-76130700 Msa0522810:CDS 35.0%
ATAATAAGGAGTCGGTCATT+CGG + chr3_4:76130695-76130714 Msa0522810:CDS 35.0%
CATGTTCTATTCTACGAATC+AGG - chr3_4:76130722-76130741 None:intergenic 35.0%
! CTGATTCGTAGAATAGAACA+TGG + chr3_4:76130720-76130739 Msa0522810:exon 35.0%
CAATAGTGTAGCAATTGTAC+AGG - chr3_4:76130799-76130818 None:intergenic 35.0%
CTGTACAATTGCTACACTAT+TGG + chr3_4:76130797-76130816 Msa0522810:three_prime_UTR 35.0%
ATTGGCAAAAAATGCTAGAC+GGG + chr3_4:76130815-76130834 Msa0522810:three_prime_UTR 35.0%
GTTCGAATAACTTAGGTCAA+AGG - chr3_4:76130889-76130908 None:intergenic 35.0%
TCATCAAGAAGGCGAAAATA+AGG - chr3_4:76130911-76130930 None:intergenic 35.0%
!! ACGTGTTTTTGAACTGGTTT+GGG - chr3_4:76131085-76131104 None:intergenic 35.0%
AGAGGAGCTTAAAGAGGTTT+GGG - chr3_4:76129041-76129060 None:intergenic 40.0%
TAGAGGAGCTTAAAGAGGTT+TGG - chr3_4:76129042-76129061 None:intergenic 40.0%
GGATTAAGAGGTTTGTGAAG+AGG - chr3_4:76129086-76129105 None:intergenic 40.0%
CAGTATGTAACAAGTCTGGA+AGG - chr3_4:76129185-76129204 None:intergenic 40.0%
AGGAATGGGATTTCCTTCAA+AGG + chr3_4:76129238-76129257 Msa0522810:CDS 40.0%
AACAATGCTCGTGAAACTTC+TGG + chr3_4:76129387-76129406 Msa0522810:CDS 40.0%
!! GCTTTGGTTTGATTCTAGAC+TGG + chr3_4:76129431-76129450 Msa0522810:CDS 40.0%
!!! TCTGGTCTACTGCTGTTTTT+GGG - chr3_4:76129666-76129685 None:intergenic 40.0%
!!! TTCTGGTCTACTGCTGTTTT+TGG - chr3_4:76129667-76129686 None:intergenic 40.0%
! CAGTGATTATGATTAGCTGC+TGG - chr3_4:76129957-76129976 None:intergenic 40.0%
TGACTTTGCAGAAGTCTTAG+AGG + chr3_4:76130126-76130145 Msa0522810:CDS 40.0%
! TCTGGTTAAGGATTTGGCTT+TGG - chr3_4:76130212-76130231 None:intergenic 40.0%
TTTCTTACCACAGAAGAGCA+CGG + chr3_4:76130285-76130304 Msa0522810:CDS 40.0%
GAATACTGAATTGGATAGCG+TGG - chr3_4:76130440-76130459 None:intergenic 40.0%
CTGGCCAATCACTGTAAAAT+TGG - chr3_4:76130462-76130481 None:intergenic 40.0%
ACATGTGTGAAGCCAATAGA+TGG - chr3_4:76130496-76130515 None:intergenic 40.0%
ATCATTCAAGAGGCCGAAAT+GGG - chr3_4:76130548-76130567 None:intergenic 40.0%
!! GGATTGGTTTGTAATGACCT+AGG - chr3_4:76130604-76130623 None:intergenic 40.0%
TTATGCGCAGAACTTTGATC+GGG - chr3_4:76130679-76130698 None:intergenic 40.0%
TTCTGCGCATAATAAGGAGT+CGG + chr3_4:76130687-76130706 Msa0522810:CDS 40.0%
ATTGTACAGGTGACAACACA+TGG - chr3_4:76130786-76130805 None:intergenic 40.0%
TTGGCAAAAAATGCTAGACG+GGG + chr3_4:76130816-76130835 Msa0522810:three_prime_UTR 40.0%
!!! TGTTTTTGAACTGGTTTGGG+TGG - chr3_4:76131082-76131101 None:intergenic 40.0%
!! GACGTGTTTTTGAACTGGTT+TGG - chr3_4:76131086-76131105 None:intergenic 40.0%
!! GAGTAGACGTGTTTTTGAAC+TGG - chr3_4:76131091-76131110 None:intergenic 40.0%
AGAGGAGCTTAAAGAGGTTT+GGG - chr3_4:76129041-76129060 None:intergenic 40.0%
TAGAGGAGCTTAAAGAGGTT+TGG - chr3_4:76129042-76129061 None:intergenic 40.0%
GGATTAAGAGGTTTGTGAAG+AGG - chr3_4:76129086-76129105 None:intergenic 40.0%
CAGTATGTAACAAGTCTGGA+AGG - chr3_4:76129185-76129204 None:intergenic 40.0%
AGGAATGGGATTTCCTTCAA+AGG + chr3_4:76129238-76129257 Msa0522810:CDS 40.0%
AACAATGCTCGTGAAACTTC+TGG + chr3_4:76129387-76129406 Msa0522810:CDS 40.0%
!! GCTTTGGTTTGATTCTAGAC+TGG + chr3_4:76129431-76129450 Msa0522810:CDS 40.0%
!!! TCTGGTCTACTGCTGTTTTT+GGG - chr3_4:76129666-76129685 None:intergenic 40.0%
!!! TTCTGGTCTACTGCTGTTTT+TGG - chr3_4:76129667-76129686 None:intergenic 40.0%
! CAGTGATTATGATTAGCTGC+TGG - chr3_4:76129957-76129976 None:intergenic 40.0%
TGACTTTGCAGAAGTCTTAG+AGG + chr3_4:76130126-76130145 Msa0522810:CDS 40.0%
! TCTGGTTAAGGATTTGGCTT+TGG - chr3_4:76130212-76130231 None:intergenic 40.0%
TTTCTTACCACAGAAGAGCA+CGG + chr3_4:76130285-76130304 Msa0522810:CDS 40.0%
GAATACTGAATTGGATAGCG+TGG - chr3_4:76130440-76130459 None:intergenic 40.0%
CTGGCCAATCACTGTAAAAT+TGG - chr3_4:76130462-76130481 None:intergenic 40.0%
ACATGTGTGAAGCCAATAGA+TGG - chr3_4:76130496-76130515 None:intergenic 40.0%
ATCATTCAAGAGGCCGAAAT+GGG - chr3_4:76130548-76130567 None:intergenic 40.0%
!! GGATTGGTTTGTAATGACCT+AGG - chr3_4:76130604-76130623 None:intergenic 40.0%
TTATGCGCAGAACTTTGATC+GGG - chr3_4:76130679-76130698 None:intergenic 40.0%
TTCTGCGCATAATAAGGAGT+CGG + chr3_4:76130687-76130706 Msa0522810:CDS 40.0%
ATTGTACAGGTGACAACACA+TGG - chr3_4:76130786-76130805 None:intergenic 40.0%
TTGGCAAAAAATGCTAGACG+GGG + chr3_4:76130816-76130835 Msa0522810:three_prime_UTR 40.0%
!!! TGTTTTTGAACTGGTTTGGG+TGG - chr3_4:76131082-76131101 None:intergenic 40.0%
!! GACGTGTTTTTGAACTGGTT+TGG - chr3_4:76131086-76131105 None:intergenic 40.0%
!! GAGTAGACGTGTTTTTGAAC+TGG - chr3_4:76131091-76131110 None:intergenic 40.0%
! GCTTAAAGAGGTTTGGGGTT+GGG - chr3_4:76129035-76129054 None:intergenic 45.0%
! AGCTTAAAGAGGTTTGGGGT+TGG - chr3_4:76129036-76129055 None:intergenic 45.0%
GAGGAGCTTAAAGAGGTTTG+GGG - chr3_4:76129040-76129059 None:intergenic 45.0%
! AAGTCTGGAAGGTTTAGCTC+TGG - chr3_4:76129174-76129193 None:intergenic 45.0%
GGGTCAGTATGTAACAAGTC+TGG - chr3_4:76129189-76129208 None:intergenic 45.0%
GGTCCACGCAACAATTGAAA+AGG + chr3_4:76129218-76129237 Msa0522810:CDS 45.0%
TTTGGCAAGCTGACCTTTGA+AGG - chr3_4:76129254-76129273 None:intergenic 45.0%
TCAAAGGTCAGCTTGCCAAA+CGG + chr3_4:76129254-76129273 Msa0522810:CDS 45.0%
TCCTTGCAGTTAGAACGCTT+TGG + chr3_4:76129415-76129434 Msa0522810:CDS 45.0%
! ACCAAAGCGTTCTAACTGCA+AGG - chr3_4:76129419-76129438 None:intergenic 45.0%
TTATCAGAAGCTAACGCGGA+TGG + chr3_4:76129630-76129649 Msa0522810:intron 45.0%
! CAGACTGGCTGTAATCCAAA+AGG - chr3_4:76129933-76129952 None:intergenic 45.0%
AAAGGACAGCGATGTCTTTG+AGG + chr3_4:76130102-76130121 Msa0522810:CDS 45.0%
CACTATTCTGCAAGCAGCTA+AGG + chr3_4:76130156-76130175 Msa0522810:CDS 45.0%
AGCCAAATCCTTAACCAGAG+TGG + chr3_4:76130213-76130232 Msa0522810:CDS 45.0%
TGCCACTCTGGTTAAGGATT+TGG - chr3_4:76130218-76130237 None:intergenic 45.0%
GATCATTCAAGAGGCCGAAA+TGG - chr3_4:76130549-76130568 None:intergenic 45.0%
GTAATGACCTAGGCAAGTTG+CGG - chr3_4:76130594-76130613 None:intergenic 45.0%
! TTGTACTTGGTGGAAGCTTC+TGG + chr3_4:76130649-76130668 Msa0522810:CDS 45.0%
! GCTTAAAGAGGTTTGGGGTT+GGG - chr3_4:76129035-76129054 None:intergenic 45.0%
! AGCTTAAAGAGGTTTGGGGT+TGG - chr3_4:76129036-76129055 None:intergenic 45.0%
GAGGAGCTTAAAGAGGTTTG+GGG - chr3_4:76129040-76129059 None:intergenic 45.0%
! AAGTCTGGAAGGTTTAGCTC+TGG - chr3_4:76129174-76129193 None:intergenic 45.0%
GGGTCAGTATGTAACAAGTC+TGG - chr3_4:76129189-76129208 None:intergenic 45.0%
GGTCCACGCAACAATTGAAA+AGG + chr3_4:76129218-76129237 Msa0522810:CDS 45.0%
TTTGGCAAGCTGACCTTTGA+AGG - chr3_4:76129254-76129273 None:intergenic 45.0%
TCAAAGGTCAGCTTGCCAAA+CGG + chr3_4:76129254-76129273 Msa0522810:CDS 45.0%
TCCTTGCAGTTAGAACGCTT+TGG + chr3_4:76129415-76129434 Msa0522810:CDS 45.0%
! ACCAAAGCGTTCTAACTGCA+AGG - chr3_4:76129419-76129438 None:intergenic 45.0%
TTATCAGAAGCTAACGCGGA+TGG + chr3_4:76129630-76129649 Msa0522810:intron 45.0%
! CAGACTGGCTGTAATCCAAA+AGG - chr3_4:76129933-76129952 None:intergenic 45.0%
AAAGGACAGCGATGTCTTTG+AGG + chr3_4:76130102-76130121 Msa0522810:CDS 45.0%
CACTATTCTGCAAGCAGCTA+AGG + chr3_4:76130156-76130175 Msa0522810:CDS 45.0%
AGCCAAATCCTTAACCAGAG+TGG + chr3_4:76130213-76130232 Msa0522810:CDS 45.0%
TGCCACTCTGGTTAAGGATT+TGG - chr3_4:76130218-76130237 None:intergenic 45.0%
GATCATTCAAGAGGCCGAAA+TGG - chr3_4:76130549-76130568 None:intergenic 45.0%
GTAATGACCTAGGCAAGTTG+CGG - chr3_4:76130594-76130613 None:intergenic 45.0%
! TTGTACTTGGTGGAAGCTTC+TGG + chr3_4:76130649-76130668 Msa0522810:CDS 45.0%
GCTTGCAAGACAACCAAGCA+TGG + chr3_4:76129148-76129167 Msa0522810:CDS 50.0%
ACATACTGACCCTGTTCGAC+AGG + chr3_4:76129197-76129216 Msa0522810:CDS 50.0%
GCAAAGCAGCAAGTGGATCA+TGG - chr3_4:76129311-76129330 None:intergenic 50.0%
!! TGATCCACTTGCTGCTTTGC+TGG + chr3_4:76129311-76129330 Msa0522810:CDS 50.0%
GATGTTCTCAGTTCCCCGAA+TGG + chr3_4:76129456-76129475 Msa0522810:CDS 50.0%
ACCTGTGCTTCTCTGCCATT+CGG - chr3_4:76129474-76129493 None:intergenic 50.0%
GAAGCACAGGTTGTTCTCCT+AGG + chr3_4:76129483-76129502 Msa0522810:CDS 50.0%
GTGTCTACAAACCTGCACCT+AGG - chr3_4:76129503-76129522 None:intergenic 50.0%
! TGATTAGCTGCTGGTCAGAC+TGG - chr3_4:76129948-76129967 None:intergenic 50.0%
TCTTATGTCAGCTGCCACTC+TGG - chr3_4:76130230-76130249 None:intergenic 50.0%
AGCACGGTCTGGATTCTAGA+AGG + chr3_4:76130301-76130320 Msa0522810:CDS 50.0%
! TGGATTGGGCGAGGTAGTAT+AGG - chr3_4:76130330-76130349 None:intergenic 50.0%
! CAGTTGCATGGCGTTGGATT+GGG - chr3_4:76130344-76130363 None:intergenic 50.0%
TGGTGTTCCGTCATCTGGAT+TGG - chr3_4:76130620-76130639 None:intergenic 50.0%
! ACCATGCTGTCGCTTGTACT+TGG + chr3_4:76130636-76130655 Msa0522810:CDS 50.0%
ACCAAGTACAAGCGACAGCA+TGG - chr3_4:76130640-76130659 None:intergenic 50.0%
! ATGCTGTCGCTTGTACTTGG+TGG + chr3_4:76130639-76130658 Msa0522810:CDS 50.0%
GCTTGCAAGACAACCAAGCA+TGG + chr3_4:76129148-76129167 Msa0522810:CDS 50.0%
ACATACTGACCCTGTTCGAC+AGG + chr3_4:76129197-76129216 Msa0522810:CDS 50.0%
GCAAAGCAGCAAGTGGATCA+TGG - chr3_4:76129311-76129330 None:intergenic 50.0%
!! TGATCCACTTGCTGCTTTGC+TGG + chr3_4:76129311-76129330 Msa0522810:CDS 50.0%
GATGTTCTCAGTTCCCCGAA+TGG + chr3_4:76129456-76129475 Msa0522810:CDS 50.0%
ACCTGTGCTTCTCTGCCATT+CGG - chr3_4:76129474-76129493 None:intergenic 50.0%
GAAGCACAGGTTGTTCTCCT+AGG + chr3_4:76129483-76129502 Msa0522810:CDS 50.0%
GTGTCTACAAACCTGCACCT+AGG - chr3_4:76129503-76129522 None:intergenic 50.0%
! TGATTAGCTGCTGGTCAGAC+TGG - chr3_4:76129948-76129967 None:intergenic 50.0%
TCTTATGTCAGCTGCCACTC+TGG - chr3_4:76130230-76130249 None:intergenic 50.0%
AGCACGGTCTGGATTCTAGA+AGG + chr3_4:76130301-76130320 Msa0522810:CDS 50.0%
! TGGATTGGGCGAGGTAGTAT+AGG - chr3_4:76130330-76130349 None:intergenic 50.0%
! CAGTTGCATGGCGTTGGATT+GGG - chr3_4:76130344-76130363 None:intergenic 50.0%
TGGTGTTCCGTCATCTGGAT+TGG - chr3_4:76130620-76130639 None:intergenic 50.0%
! ACCATGCTGTCGCTTGTACT+TGG + chr3_4:76130636-76130655 Msa0522810:CDS 50.0%
ACCAAGTACAAGCGACAGCA+TGG - chr3_4:76130640-76130659 None:intergenic 50.0%
! ATGCTGTCGCTTGTACTTGG+TGG + chr3_4:76130639-76130658 Msa0522810:CDS 50.0%
!! GGTTTAGCTCTGGCCATGCT+TGG - chr3_4:76129164-76129183 None:intergenic 55.0%
TTGCGTGGACCTGTCGAACA+GGG - chr3_4:76129209-76129228 None:intergenic 55.0%
TTGCCAAACGGCTGCAGGAA+GGG + chr3_4:76129266-76129285 Msa0522810:CDS 55.0%
!! CACTTGCTGCTTTGCTGGCA+GGG + chr3_4:76129316-76129335 Msa0522810:CDS 55.0%
!! ACTTGCTGCTTTGCTGGCAG+GGG + chr3_4:76129317-76129336 Msa0522810:CDS 55.0%
CTGTGCTTCTCTGCCATTCG+GGG - chr3_4:76129472-76129491 None:intergenic 55.0%
CCTGTGCTTCTCTGCCATTC+GGG - chr3_4:76129473-76129492 None:intergenic 55.0%
CAGGTTGTTCTCCTAGGTGC+AGG + chr3_4:76129489-76129508 Msa0522810:CDS 55.0%
GTCAGCTGCCACTCTGGTTA+AGG - chr3_4:76130224-76130243 None:intergenic 55.0%
! TACCACAGAAGAGCACGGTC+TGG + chr3_4:76130290-76130309 Msa0522810:CDS 55.0%
ATCCAGACCGTGCTCTTCTG+TGG - chr3_4:76130295-76130314 None:intergenic 55.0%
! GCAGTTGCATGGCGTTGGAT+TGG - chr3_4:76130345-76130364 None:intergenic 55.0%
TCTCAGCAGTTGCATGGCGT+TGG - chr3_4:76130350-76130369 None:intergenic 55.0%
GGAGACCCAGATGCCCATTT+CGG + chr3_4:76130532-76130551 Msa0522810:CDS 55.0%
AGAGGCCGAAATGGGCATCT+GGG - chr3_4:76130540-76130559 None:intergenic 55.0%
AAGAGGCCGAAATGGGCATC+TGG - chr3_4:76130541-76130560 None:intergenic 55.0%
ACAAGCTCCGCAACTTGCCT+AGG + chr3_4:76130584-76130603 Msa0522810:CDS 55.0%
CAGCATGGTGTTCCGTCATC+TGG - chr3_4:76130625-76130644 None:intergenic 55.0%
!! GGTTTAGCTCTGGCCATGCT+TGG - chr3_4:76129164-76129183 None:intergenic 55.0%
TTGCGTGGACCTGTCGAACA+GGG - chr3_4:76129209-76129228 None:intergenic 55.0%
TTGCCAAACGGCTGCAGGAA+GGG + chr3_4:76129266-76129285 Msa0522810:CDS 55.0%
!! CACTTGCTGCTTTGCTGGCA+GGG + chr3_4:76129316-76129335 Msa0522810:CDS 55.0%
!! ACTTGCTGCTTTGCTGGCAG+GGG + chr3_4:76129317-76129336 Msa0522810:CDS 55.0%
CTGTGCTTCTCTGCCATTCG+GGG - chr3_4:76129472-76129491 None:intergenic 55.0%
CCTGTGCTTCTCTGCCATTC+GGG - chr3_4:76129473-76129492 None:intergenic 55.0%
CAGGTTGTTCTCCTAGGTGC+AGG + chr3_4:76129489-76129508 Msa0522810:CDS 55.0%
GTCAGCTGCCACTCTGGTTA+AGG - chr3_4:76130224-76130243 None:intergenic 55.0%
! TACCACAGAAGAGCACGGTC+TGG + chr3_4:76130290-76130309 Msa0522810:CDS 55.0%
ATCCAGACCGTGCTCTTCTG+TGG - chr3_4:76130295-76130314 None:intergenic 55.0%
! GCAGTTGCATGGCGTTGGAT+TGG - chr3_4:76130345-76130364 None:intergenic 55.0%
TCTCAGCAGTTGCATGGCGT+TGG - chr3_4:76130350-76130369 None:intergenic 55.0%
GGAGACCCAGATGCCCATTT+CGG + chr3_4:76130532-76130551 Msa0522810:CDS 55.0%
AGAGGCCGAAATGGGCATCT+GGG - chr3_4:76130540-76130559 None:intergenic 55.0%
AAGAGGCCGAAATGGGCATC+TGG - chr3_4:76130541-76130560 None:intergenic 55.0%
ACAAGCTCCGCAACTTGCCT+AGG + chr3_4:76130584-76130603 Msa0522810:CDS 55.0%
CAGCATGGTGTTCCGTCATC+TGG - chr3_4:76130625-76130644 None:intergenic 55.0%
GTTGCGTGGACCTGTCGAAC+AGG - chr3_4:76129210-76129229 None:intergenic 60.0%
TCAGCTTGCCAAACGGCTGC+AGG + chr3_4:76129261-76129280 Msa0522810:CDS 60.0%
CTTGCCAAACGGCTGCAGGA+AGG + chr3_4:76129265-76129284 Msa0522810:CDS 60.0%
TAGCCCTTCCTGCAGCCGTT+TGG - chr3_4:76129272-76129291 None:intergenic 60.0%
CCTGCCAGCAAAGCAGCAAG+TGG - chr3_4:76129318-76129337 None:intergenic 60.0%
!! CCACTTGCTGCTTTGCTGGC+AGG + chr3_4:76129315-76129334 Msa0522810:CDS 60.0%
! CCCGAATGGCAGAGAAGCAC+AGG + chr3_4:76129470-76129489 Msa0522810:CDS 60.0%
GTTGCGTGGACCTGTCGAAC+AGG - chr3_4:76129210-76129229 None:intergenic 60.0%
TCAGCTTGCCAAACGGCTGC+AGG + chr3_4:76129261-76129280 Msa0522810:CDS 60.0%
CTTGCCAAACGGCTGCAGGA+AGG + chr3_4:76129265-76129284 Msa0522810:CDS 60.0%
TAGCCCTTCCTGCAGCCGTT+TGG - chr3_4:76129272-76129291 None:intergenic 60.0%
CCTGCCAGCAAAGCAGCAAG+TGG - chr3_4:76129318-76129337 None:intergenic 60.0%
!! CCACTTGCTGCTTTGCTGGC+AGG + chr3_4:76129315-76129334 Msa0522810:CDS 60.0%
! CCCGAATGGCAGAGAAGCAC+AGG + chr3_4:76129470-76129489 Msa0522810:CDS 60.0%
CGGCTGCAGGAAGGGCTATG+TGG + chr3_4:76129274-76129293 Msa0522810:CDS 65.0%
! GCATGGCGTTGGATTGGGCG+AGG - chr3_4:76130339-76130358 None:intergenic 65.0%
CGGCTGCAGGAAGGGCTATG+TGG + chr3_4:76129274-76129293 Msa0522810:CDS 65.0%
! GCATGGCGTTGGATTGGGCG+AGG - chr3_4:76130339-76130358 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 76129032 76131124 76129032 ID=Msa0522810;Name=Msa0522810
chr3_4 mRNA 76129032 76131124 76129032 ID=Msa0522810-mRNA-1;Parent=Msa0522810;Name=Msa0522810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=97|1|1|1|1|1|2|401|345
chr3_4 exon 76129032 76129510 76129032 ID=Msa0522810-mRNA-1:exon:21908;Parent=Msa0522810-mRNA-1
chr3_4 exon 76130068 76131124 76130068 ID=Msa0522810-mRNA-1:exon:21909;Parent=Msa0522810-mRNA-1
chr3_4 five_prime_UTR 76129032 76129128 76129032 ID=Msa0522810-mRNA-1:five_prime_utr;Parent=Msa0522810-mRNA-1
chr3_4 CDS 76129129 76129510 76129129 ID=Msa0522810-mRNA-1:cds;Parent=Msa0522810-mRNA-1
chr3_4 CDS 76130068 76130723 76130068 ID=Msa0522810-mRNA-1:cds;Parent=Msa0522810-mRNA-1
chr3_4 three_prime_UTR 76130724 76131124 76130724 ID=Msa0522810-mRNA-1:three_prime_utr;Parent=Msa0522810-mRNA-1
Gene Sequence

>Msa0522810

ATGTCTGATCAAGTAAATGGCTTGCAAGACAACCAAGCATGGCCAGAGCTAAACCTTCCAGACTTGTTACATACTGACCCTGTTCGACAGGTCCACGCAACAATTGAAAAGGAATGGGATTTCCTTCAAAGGTCAGCTTGCCAAACGGCTGCAGGAAGGGCTATGTGGAAGCATGTGATCCATGATCCACTTGCTGCTTTGCTGGCAGGGGAGACTTATTTGAGAAATCTTCATGAAAAGATGAGAAAAGACTATCTCAACAATGCTCGTGAAACTTCTGGAGTGATCCTTGCAGTTAGAACGCTTTGGTTTGATTCTAGACTGGAAGATGTTCTCAGTTCCCCGAATGGCAGAGAAGCACAGGTTGTTCTCCTAGGTGCAGGAATGGATACAAGAGCATATCGTTTGAGTTGCTTAAAGGACAGCGATGTCTTTGAGGTTGACTTTGCAGAAGTCTTAGAGGTAAAAAGCACTATTCTGCAAGCAGCTAAGGAATCAACATACGAGTCACAACATATTATGTCCAAAGCCAAATCCTTAACCAGAGTGGCAGCTGACATAAGAGAAAATGATTGGATGGAAAAGCTTCAAATTGCAGGTTTCTTACCACAGAAGAGCACGGTCTGGATTCTAGAAGGTATCCTATACTACCTCGCCCAATCCAACGCCATGCAACTGCTGAGAATTTTAGCTAACAATTGTGTCTTAACTCACACGGTCATCCTAGCAGACTTCATGAATAAGTCATCAACCACGCTATCCAATTCAGTATTCCAATTTTACAGTGATTGGCCAGACCAACTTTTACCATCTATTGGCTTCACACATGTAAAACTTTCACAGATTGGAGACCCAGATGCCCATTTCGGCCTCTTGAATGATCCATTAAATCTCTTCAACAAGCTCCGCAACTTGCCTAGGTCATTACAAACCAATCCAGATGACGGAACACCATGCTGTCGCTTGTACTTGGTGGAAGCTTCTGGTTCACCCGATCAAAGTTCTGCGCATAATAAGGAGTCGGTCATTCGGTCCTGA

Protein sequence

>Msa0522810

MSDQVNGLQDNQAWPELNLPDLLHTDPVRQVHATIEKEWDFLQRSACQTAAGRAMWKHVIHDPLAALLAGETYLRNLHEKMRKDYLNNARETSGVILAVRTLWFDSRLEDVLSSPNGREAQVVLLGAGMDTRAYRLSCLKDSDVFEVDFAEVLEVKSTILQAAKESTYESQHIMSKAKSLTRVAADIRENDWMEKLQIAGFLPQKSTVWILEGILYYLAQSNAMQLLRILANNCVLTHTVILADFMNKSSTTLSNSVFQFYSDWPDQLLPSIGFTHVKLSQIGDPDAHFGLLNDPLNLFNKLRNLPRSLQTNPDDGTPCCRLYLVEASGSPDQSSAHNKESVIRS*