Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136560 | XP_013470063.1 | 99.611 | 257 | 0 | 1 | 1 | 256 | 1 | 257 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136560 | sp|Q54DD7|UNC50_DICDI | 44.275 | 262 | 139 | 3 | 1 | 256 | 1 | 261 | 1.05e-75 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136560 | A0A072VQZ1 | 99.611 | 257 | 0 | 1 | 1 | 256 | 1 | 257 | 0.0 | 520 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021240 | Msa0136560 | -0.845525 | 3.846402e-59 | -8.615850e-47 |
| Msa0024320 | Msa0136560 | -0.808709 | 2.710315e-50 | -8.615850e-47 |
| Msa0024950 | Msa0136560 | 0.835436 | 1.680365e-56 | -8.615850e-47 |
| Msa0030760 | Msa0136560 | -0.813824 | 2.104945e-51 | -8.615850e-47 |
| Msa0032990 | Msa0136560 | -0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa0034100 | Msa0136560 | -0.800226 | 1.591647e-48 | -8.615850e-47 |
| Msa0037040 | Msa0136560 | -0.806273 | 8.912280e-50 | -8.615850e-47 |
| Msa0037270 | Msa0136560 | -0.800394 | 1.471459e-48 | -8.615850e-47 |
| Msa0038750 | Msa0136560 | -0.815700 | 8.083025e-52 | -8.615850e-47 |
| Msa0042240 | Msa0136560 | -0.823695 | 1.206058e-53 | -8.615850e-47 |
| Msa0044700 | Msa0136560 | -0.831796 | 1.362578e-55 | -8.615850e-47 |
| Msa0046020 | Msa0136560 | -0.803531 | 3.334599e-49 | -8.615850e-47 |
| Msa0050310 | Msa0136560 | -0.808094 | 3.666636e-50 | -8.615850e-47 |
| Msa0056910 | Msa0136560 | 0.800376 | 1.483406e-48 | -8.615850e-47 |
| Msa0065400 | Msa0136560 | -0.806962 | 6.376165e-50 | -8.615850e-47 |
| Msa0065520 | Msa0136560 | -0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa0069070 | Msa0136560 | -0.812703 | 3.710646e-51 | -8.615850e-47 |
| Msa0076980 | Msa0136560 | -0.809194 | 2.134962e-50 | -8.615850e-47 |
| Msa0078160 | Msa0136560 | -0.815486 | 9.018831e-52 | -8.615850e-47 |
| Msa0078170 | Msa0136560 | -0.822722 | 2.034539e-53 | -8.615850e-47 |
| Msa0081290 | Msa0136560 | -0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa0081790 | Msa0136560 | -0.814039 | 1.887546e-51 | -8.615850e-47 |
| Msa0085470 | Msa0136560 | -0.809549 | 1.790842e-50 | -8.615850e-47 |
| Msa0086620 | Msa0136560 | -0.805239 | 1.469510e-49 | -8.615850e-47 |
| Msa0088670 | Msa0136560 | -0.827582 | 1.445123e-54 | -8.615850e-47 |
| Msa0097730 | Msa0136560 | -0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa0097970 | Msa0136560 | -0.800670 | 1.292797e-48 | -8.615850e-47 |
| Msa0113910 | Msa0136560 | -0.848671 | 5.282162e-60 | -8.615850e-47 |
| Msa0118250 | Msa0136560 | -0.801065 | 1.073551e-48 | -8.615850e-47 |
| Msa0122170 | Msa0136560 | -0.833529 | 5.062050e-56 | -8.615850e-47 |
| Msa0128110 | Msa0136560 | -0.805915 | 1.059900e-49 | -8.615850e-47 |
| Msa0136560 | Msa0137010 | -0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0136560 | Msa0138340 | -0.810532 | 1.099830e-50 | -8.615850e-47 |
| Msa0136560 | Msa0140870 | -0.815210 | 1.038930e-51 | -8.615850e-47 |
| Msa0136560 | Msa0147960 | -0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0136560 | Msa0163400 | -0.809416 | 1.912790e-50 | -8.615850e-47 |
| Msa0136560 | Msa0172290 | -0.802531 | 5.368818e-49 | -8.615850e-47 |
| Msa0136560 | Msa0183990 | 0.956680 | 1.665380e-114 | -8.615850e-47 |
| Msa0136560 | Msa0188670 | -0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0136560 | Msa0194750 | -0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0136560 | Msa0221460 | -0.805731 | 1.158516e-49 | -8.615850e-47 |
| Msa0136560 | Msa0227970 | -0.814844 | 1.252787e-51 | -8.615850e-47 |
| Msa0136560 | Msa0229350 | -0.804132 | 2.502135e-49 | -8.615850e-47 |
| Msa0136560 | Msa0236690 | -0.805120 | 1.555807e-49 | -8.615850e-47 |
| Msa0136560 | Msa0244820 | -0.810627 | 1.049203e-50 | -8.615850e-47 |
| Msa0136560 | Msa0258910 | 0.802511 | 5.417955e-49 | -8.615850e-47 |
| Msa0136560 | Msa0270230 | -0.805178 | 1.512969e-49 | -8.615850e-47 |
| Msa0136560 | Msa0300670 | -0.806991 | 6.286831e-50 | -8.615850e-47 |
| Msa0136560 | Msa0307820 | -0.807124 | 5.890841e-50 | -8.615850e-47 |
| Msa0136560 | Msa0329050 | -0.819968 | 8.788086e-53 | -8.615850e-47 |
| Msa0136560 | Msa0329060 | -0.824982 | 6.007096e-54 | -8.615850e-47 |
| Msa0136560 | Msa0337760 | -0.800236 | 1.584151e-48 | -8.615850e-47 |
| Msa0136560 | Msa0343520 | 0.806575 | 7.695782e-50 | -8.615850e-47 |
| Msa0136560 | Msa0367600 | -0.804827 | 1.791898e-49 | -8.615850e-47 |
| Msa0136560 | Msa0369100 | -0.818237 | 2.177216e-52 | -8.615850e-47 |
| Msa0136560 | Msa0369430 | -0.839866 | 1.225984e-57 | -8.615850e-47 |
| Msa0136560 | Msa0378530 | -0.834182 | 3.474063e-56 | -8.615850e-47 |
| Msa0136560 | Msa0384140 | -0.806506 | 7.959190e-50 | -8.615850e-47 |
| Msa0136560 | Msa0386230 | -0.807202 | 5.670755e-50 | -8.615850e-47 |
| Msa0136560 | Msa0390350 | -0.810423 | 1.161034e-50 | -8.615850e-47 |
| Msa0136560 | Msa0404710 | -0.809666 | 1.690553e-50 | -8.615850e-47 |
| Msa0136560 | Msa0415210 | -0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0136560 | Msa0417990 | 0.803465 | 3.441113e-49 | -8.615850e-47 |
| Msa0136560 | Msa0428300 | -0.800244 | 1.578552e-48 | -8.615850e-47 |
| Msa0136560 | Msa0429000 | -0.802380 | 5.766944e-49 | -8.615850e-47 |
| Msa0136560 | Msa0431550 | -0.801691 | 7.990478e-49 | -8.615850e-47 |
| Msa0136560 | Msa0433890 | -0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0136560 | Msa0434830 | -0.801057 | 1.077249e-48 | -8.615850e-47 |
| Msa0136560 | Msa0460220 | -0.810035 | 1.407867e-50 | -8.615850e-47 |
| Msa0136560 | Msa0471130 | -0.808392 | 3.168069e-50 | -8.615850e-47 |
| Msa0136560 | Msa0474220 | -0.809142 | 2.190055e-50 | -8.615850e-47 |
| Msa0136560 | Msa0474290 | -0.825298 | 5.060099e-54 | -8.615850e-47 |
| Msa0136560 | Msa0476570 | -0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0136560 | Msa0485210 | -0.812948 | 3.279130e-51 | -8.615850e-47 |
| Msa0136560 | Msa0504310 | -0.812579 | 3.949171e-51 | -8.615850e-47 |
| Msa0136560 | Msa0504810 | -0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0136560 | Msa0518720 | -0.824497 | 7.819379e-54 | -8.615850e-47 |
| Msa0136560 | Msa0519070 | -0.803253 | 3.808127e-49 | -8.615850e-47 |
| Msa0136560 | Msa0522810 | -0.827791 | 1.286787e-54 | -8.615850e-47 |
| Msa0136560 | Msa0527210 | -0.811743 | 6.010674e-51 | -8.615850e-47 |
| Msa0136560 | Msa0548260 | -0.813768 | 2.165634e-51 | -8.615850e-47 |
| Msa0136560 | Msa0550770 | -0.823648 | 1.236741e-53 | -8.615850e-47 |
| Msa0136560 | Msa0550800 | -0.825208 | 5.314573e-54 | -8.615850e-47 |
| Msa0136560 | Msa0565430 | -0.812395 | 4.332057e-51 | -8.615850e-47 |
| Msa0136560 | Msa0566090 | -0.822276 | 2.582944e-53 | -8.615850e-47 |
| Msa0136560 | Msa0576480 | -0.805920 | 1.057318e-49 | -8.615850e-47 |
| Msa0136560 | Msa0576640 | -0.800243 | 1.579016e-48 | -8.615850e-47 |
| Msa0136560 | Msa0578400 | -0.806462 | 8.129263e-50 | -8.615850e-47 |
| Msa0136560 | Msa0578930 | 0.808565 | 2.909091e-50 | -8.615850e-47 |
| Msa0136560 | Msa0581490 | -0.803049 | 4.196866e-49 | -8.615850e-47 |
| Msa0136560 | Msa0585720 | -0.800702 | 1.273064e-48 | -8.615850e-47 |
| Msa0136560 | Msa0591890 | 0.802808 | 4.705784e-49 | -8.615850e-47 |
| Msa0136560 | Msa0603180 | -0.823539 | 1.311958e-53 | -8.615850e-47 |
| Msa0136560 | Msa0612880 | -0.807611 | 4.644923e-50 | -8.615850e-47 |
| Msa0136560 | Msa0614020 | -0.806493 | 8.008030e-50 | -8.615850e-47 |
| Msa0136560 | Msa0619690 | -0.815264 | 1.010536e-51 | -8.615850e-47 |
| Msa0136560 | Msa0634900 | -0.819660 | 1.033748e-52 | -8.615850e-47 |
| Msa0136560 | Msa0644220 | -0.802105 | 6.568351e-49 | -8.615850e-47 |
| Msa0136560 | Msa0644340 | 0.809692 | 1.668569e-50 | -8.615850e-47 |
| Msa0136560 | Msa0654560 | -0.818935 | 1.511447e-52 | -8.615850e-47 |
| Msa0136560 | Msa0660070 | -0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0136560 | Msa0661800 | 0.800264 | 1.563717e-48 | -8.615850e-47 |
| Msa0136560 | Msa0667680 | -0.809609 | 1.738630e-50 | -8.615850e-47 |
| Msa0136560 | Msa0675230 | -0.815939 | 7.148431e-52 | -8.615850e-47 |
| Msa0136560 | Msa0684030 | -0.824718 | 6.936135e-54 | -8.615850e-47 |
| Msa0136560 | Msa0685610 | 0.804756 | 1.853721e-49 | -8.615850e-47 |
| Msa0136560 | Msa0706130 | -0.843525 | 1.328127e-58 | -8.615850e-47 |
| Msa0136560 | Msa0708380 | -0.824078 | 9.807737e-54 | -8.615850e-47 |
| Msa0136560 | Msa0711860 | -0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0136560 | Msa0721650 | -0.805377 | 1.374515e-49 | -8.615850e-47 |
| Msa0136560 | Msa0733240 | -0.825006 | 5.930342e-54 | -8.615850e-47 |
| Msa0136560 | Msa0749160 | -0.809812 | 1.572197e-50 | -8.615850e-47 |
| Msa0136560 | Msa0750200 | -0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0136560 | Msa0751540 | -0.802210 | 6.251006e-49 | -8.615850e-47 |
| Msa0136560 | Msa0752950 | -0.818298 | 2.108456e-52 | -8.615850e-47 |
| Msa0136560 | Msa0754880 | -0.814594 | 1.422863e-51 | -8.615850e-47 |
| Msa0136560 | Msa0756670 | -0.807725 | 4.392972e-50 | -8.615850e-47 |
| Msa0136560 | Msa0758880 | -0.804123 | 2.512428e-49 | -8.615850e-47 |
| Msa0136560 | Msa0774360 | -0.801005 | 1.104405e-48 | -8.615850e-47 |
| Msa0136560 | Msa0790380 | -0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0136560 | Msa0793130 | -0.807138 | 5.851187e-50 | -8.615850e-47 |
| Msa0136560 | Msa0793530 | -0.801976 | 6.982240e-49 | -8.615850e-47 |
| Msa0136560 | Msa0794900 | -0.805554 | 1.262342e-49 | -8.615850e-47 |
| Msa0136560 | Msa0796840 | -0.809156 | 2.175138e-50 | -8.615850e-47 |
| Msa0136560 | Msa0797980 | -0.802064 | 6.698892e-49 | -8.615850e-47 |
| Msa0136560 | Msa0801920 | -0.808233 | 3.425755e-50 | -8.615850e-47 |
| Msa0136560 | Msa0812020 | -0.816580 | 5.138891e-52 | -8.615850e-47 |
| Msa0136560 | Msa0813630 | -0.802759 | 4.816921e-49 | -8.615850e-47 |
| Msa0136560 | Msa0833980 | -0.806914 | 6.526516e-50 | -8.615850e-47 |
| Msa0136560 | Msa0836060 | -0.803715 | 3.054187e-49 | -8.615850e-47 |
| Msa0136560 | Msa0838120 | -0.807119 | 5.905326e-50 | -8.615850e-47 |
| Msa0136560 | Msa0841570 | -0.810576 | 1.075975e-50 | -8.615850e-47 |
| Msa0136560 | Msa0847140 | 0.805897 | 1.069165e-49 | -8.615850e-47 |
| Msa0136560 | Msa0848780 | -0.811982 | 5.332124e-51 | -8.615850e-47 |
| Msa0136560 | Msa0849080 | -0.813772 | 2.161207e-51 | -8.615850e-47 |
| Msa0136560 | Msa0852090 | -0.815884 | 7.354878e-52 | -8.615850e-47 |
| Msa0136560 | Msa0871420 | 0.801865 | 7.359333e-49 | -8.615850e-47 |
| Msa0136560 | Msa0904590 | 0.806882 | 6.629331e-50 | -8.615850e-47 |
| Msa0136560 | Msa0911710 | -0.804052 | 2.598992e-49 | -8.615850e-47 |
| Msa0136560 | Msa0927190 | -0.800459 | 1.426748e-48 | -8.615850e-47 |
| Msa0136560 | Msa0933320 | -0.804078 | 2.567592e-49 | -8.615850e-47 |
| Msa0136560 | Msa0936630 | 0.804076 | 2.569926e-49 | -8.615850e-47 |
| Msa0136560 | Msa0937160 | -0.800622 | 1.322167e-48 | -8.615850e-47 |
| Msa0136560 | Msa0938150 | -0.813352 | 2.672794e-51 | -8.615850e-47 |
| Msa0136560 | Msa0941150 | -0.803700 | 3.076122e-49 | -8.615850e-47 |
| Msa0136560 | Msa0941420 | -0.801143 | 1.034674e-48 | -8.615850e-47 |
| Msa0136560 | Msa0971100 | -0.801105 | 1.053248e-48 | -8.615850e-47 |
| Msa0136560 | Msa0999480 | -0.804640 | 1.960127e-49 | -8.615850e-47 |
| Msa0136560 | Msa1026650 | 0.956881 | 1.031578e-114 | -8.615850e-47 |
| Msa0136560 | Msa1033460 | -0.804545 | 2.052118e-49 | -8.615850e-47 |
| Msa0136560 | Msa1039440 | -0.811707 | 6.117802e-51 | -8.615850e-47 |
| Msa0136560 | Msa1057340 | -0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0136560 | Msa1071380 | -0.816494 | 5.371988e-52 | -8.615850e-47 |
| Msa0136560 | Msa1078600 | -0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa0136560 | Msa1078770 | -0.810849 | 9.395435e-51 | -8.615850e-47 |
| Msa0136560 | Msa1126980 | -0.821116 | 4.791641e-53 | -8.615850e-47 |
| Msa0136560 | Msa1129880 | -0.805595 | 1.237247e-49 | -8.615850e-47 |
| Msa0136560 | Msa1132250 | -0.801613 | 8.288199e-49 | -8.615850e-47 |
| Msa0136560 | Msa1136770 | -0.809625 | 1.725138e-50 | -8.615850e-47 |
| Msa0136560 | Msa1140930 | 0.800063 | 1.718240e-48 | -8.615850e-47 |
| Msa0136560 | Msa1143820 | -0.806717 | 7.181327e-50 | -8.615850e-47 |
| Msa0136560 | Msa1166960 | -0.808957 | 2.399383e-50 | -8.615850e-47 |
| Msa0136560 | Msa1169600 | -0.803754 | 2.997716e-49 | -8.615850e-47 |
| Msa0136560 | Msa1191540 | -0.807318 | 5.358326e-50 | -8.615850e-47 |
| Msa0136560 | Msa1197720 | 0.812179 | 4.829772e-51 | -8.615850e-47 |
| Msa0136560 | Msa1203320 | -0.811804 | 5.827642e-51 | -8.615850e-47 |
| Msa0136560 | Msa1206510 | -0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0136560 | Msa1207660 | -0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa0136560 | Msa1207770 | -0.832146 | 1.116544e-55 | -8.615850e-47 |
| Msa0136560 | Msa1209990 | -0.801768 | 7.706511e-49 | -8.615850e-47 |
| Msa0136560 | Msa1212210 | -0.802028 | 6.811662e-49 | -8.615850e-47 |
| Msa0136560 | Msa1223620 | 0.808082 | 3.688305e-50 | -8.615850e-47 |
| Msa0136560 | Msa1225240 | -0.821782 | 3.362480e-53 | -8.615850e-47 |
| Msa0136560 | Msa1225280 | -0.823596 | 1.271893e-53 | -8.615850e-47 |
| Msa0136560 | Msa1240240 | -0.808554 | 2.925841e-50 | -8.615850e-47 |
| Msa0136560 | Msa1257860 | -0.834967 | 2.206198e-56 | -8.615850e-47 |
| Msa0136560 | Msa1270850 | -0.812269 | 4.615905e-51 | -8.615850e-47 |
| Msa0136560 | Msa1273320 | 0.812649 | 3.811488e-51 | -8.615850e-47 |
| Msa0136560 | Msa1286470 | -0.809836 | 1.554065e-50 | -8.615850e-47 |
| Msa0136560 | Msa1297490 | -0.802241 | 6.158449e-49 | -8.615850e-47 |
| Msa0136560 | Msa1297550 | -0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0136560 | Msa1298170 | -0.808634 | 2.812140e-50 | -8.615850e-47 |
| Msa0136560 | Msa1298480 | -0.802619 | 5.149308e-49 | -8.615850e-47 |
| Msa0136560 | Msa1301610 | -0.805501 | 1.294738e-49 | -8.615850e-47 |
| Msa0136560 | Msa1329360 | 0.806476 | 8.076904e-50 | -8.615850e-47 |
| Msa0136560 | Msa1329770 | 0.805575 | 1.249275e-49 | -8.615850e-47 |
| Msa0136560 | Msa1331530 | -0.833898 | 4.093707e-56 | -8.615850e-47 |
| Msa0136560 | Msa1335200 | -0.822086 | 2.858736e-53 | -8.615850e-47 |
| Msa0136560 | Msa1338810 | -0.820981 | 5.146599e-53 | -8.615850e-47 |
| Msa0136560 | Msa1342110 | -0.828182 | 1.036134e-54 | -8.615850e-47 |
| Msa0136560 | Msa1350130 | -0.812022 | 5.224393e-51 | -8.615850e-47 |
| Msa0136560 | Msa1352600 | -0.809896 | 1.508209e-50 | -8.615850e-47 |
| Msa0136560 | Msa1360070 | -0.801588 | 8.389881e-49 | -8.615850e-47 |
| Msa0136560 | Msa1361580 | -0.822308 | 2.538970e-53 | -8.615850e-47 |
| Msa0136560 | Msa1369180 | -0.800825 | 1.201756e-48 | -8.615850e-47 |
| Msa0136560 | Msa1369400 | -0.821823 | 3.289633e-53 | -8.615850e-47 |
| Msa0136560 | Msa1371540 | -0.811229 | 7.772477e-51 | -8.615850e-47 |
| Msa0136560 | Msa1373420 | -0.806022 | 1.006356e-49 | -8.615850e-47 |
| Msa0136560 | Msa1375650 | -0.819803 | 9.585568e-53 | -8.615850e-47 |
| Msa0136560 | Msa1379270 | -0.804465 | 2.132586e-49 | -8.615850e-47 |
| Msa0136560 | Msa1388010 | -0.809944 | 1.472856e-50 | -8.615850e-47 |
| Msa0136560 | Msa1398150 | -0.807623 | 4.617608e-50 | -8.615850e-47 |
| Msa0136560 | Msa1400290 | -0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0136560 | Msa1412740 | -0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa0136560 | Msa1412810 | -0.810408 | 1.170174e-50 | -8.615850e-47 |
| Msa0136560 | Msa1424250 | -0.801530 | 8.622506e-49 | -8.615850e-47 |
| Msa0136560 | Msa1429180 | -0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa0136560 | Msa1440990 | -0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa0136560 | Msa1443280 | -0.812696 | 3.722919e-51 | -8.615850e-47 |
| Msa0136560 | Msa1449270 | -0.833269 | 5.876418e-56 | -8.615850e-47 |
| Msa0136560 | Msa1453180 | -0.801124 | 1.044224e-48 | -8.615850e-47 |
| Msa0136560 | Msa1453540 | -0.815757 | 7.848161e-52 | -8.615850e-47 |
| Msa0136560 | Msa1460340 | -0.814205 | 1.734518e-51 | -8.615850e-47 |
| Msa0136560 | Msa1462210 | -0.811877 | 5.618098e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136560 | MtrunA17_Chr1g0208051 | 99.611 | 257 | 0 | 1 | 1 | 256 | 1 | 257 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0136560 | AT2G15240.1 | 85.532 | 235 | 34 | 0 | 22 | 256 | 18 | 252 | 4.89e-144 | 404 |
Find 80 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATTGACTGGCATATTTC+TGG | 0.151764 | 1_3:-68568775 | Msa0136560:CDS |
| AATAGATTTGATAGCAATTC+TGG | 0.203453 | 1_3:+68568139 | None:intergenic |
| GGCCTACAATGATGCATTTC+CGG | 0.241107 | 1_3:+68567344 | None:intergenic |
| ACAATATGAGAAGGCTTAAA+TGG | 0.252992 | 1_3:-68567400 | Msa0136560:three_prime_UTR |
| CTATATACTTACACAACTTT+TGG | 0.255052 | 1_3:+68570129 | None:intergenic |
| TACCATTATCTAAATTTCTT+AGG | 0.266410 | 1_3:-68568094 | Msa0136560:CDS |
| ATCGCGTGCCCATTGATTCT+TGG | 0.282291 | 1_3:+68569282 | None:intergenic |
| TGTGATCTGCAGCCTTCTTT+TGG | 0.305006 | 1_3:-68569245 | Msa0136560:CDS |
| AAAGGTGGTCCTCTCCAAAA+AGG | 0.307456 | 1_3:+68567679 | None:intergenic |
| ATATGCCAGTCAATAGAAAA+TGG | 0.326818 | 1_3:+68568781 | None:intergenic |
| ACCAATTGGATACAGGAAAA+AGG | 0.338264 | 1_3:+68567661 | None:intergenic |
| TTCAGGTATGACCATAGTTC+TGG | 0.341007 | 1_3:-68568840 | Msa0136560:intron |
| GCCTACAATGATGCATTTCC+GGG | 0.345153 | 1_3:+68567345 | None:intergenic |
| GTAAGGAAGAAGAGTGGAAT+TGG | 0.353691 | 1_3:+68571392 | None:intergenic |
| AACCTAAGAAATTTAGATAA+TGG | 0.356946 | 1_3:+68568092 | None:intergenic |
| CTCGAAGATAAGAATTAGTT+AGG | 0.359359 | 1_3:+68568636 | None:intergenic |
| GCTATCAAATCTATTATTCA+TGG | 0.365343 | 1_3:-68568131 | Msa0136560:CDS |
| ACCGGAGAGGGGAGAGAGAA+AGG | 0.399521 | 1_3:-68571586 | Msa0136560:five_prime_UTR |
| ATAGAGGAGATAGAAAATAA+TGG | 0.413708 | 1_3:+68568182 | None:intergenic |
| AGGACAATTACTACACCAAT+TGG | 0.428443 | 1_3:+68567647 | None:intergenic |
| GATCGTTTCCGTAGCTGAAA+CGG | 0.434469 | 1_3:-68571501 | Msa0136560:five_prime_UTR |
| CCCTCTCCGGTACCTTGCTT+CGG | 0.434864 | 1_3:+68571598 | None:intergenic |
| TTCATTGTAGTGGCAACAAA+TGG | 0.444628 | 1_3:-68570196 | Msa0136560:intron |
| CTTCGATTGATAGTAGTAGA+AGG | 0.447661 | 1_3:+68567323 | None:intergenic |
| TCTCCTCTATTGGTGGCTCA+TGG | 0.448618 | 1_3:-68568169 | Msa0136560:CDS |
| CATTACTTCAGAACCTCAAC+AGG | 0.449759 | 1_3:+68567429 | None:intergenic |
| TGAAAGAATATATCGATTGT+TGG | 0.451253 | 1_3:+68567180 | None:intergenic |
| CTAAAATTTCTTTGTCAACT+CGG | 0.455629 | 1_3:-68567214 | Msa0136560:three_prime_UTR |
| AAACCATGAGCCACCAATAG+AGG | 0.456905 | 1_3:+68568166 | None:intergenic |
| GATTCGATCCGTTTCAGCTA+CGG | 0.457300 | 1_3:+68571493 | None:intergenic |
| CTGCAGATCACAACAAATGC+AGG | 0.457525 | 1_3:+68569256 | None:intergenic |
| CCCTTTCTCTCTCCCCTCTC+CGG | 0.458054 | 1_3:+68571585 | None:intergenic |
| GAAAGAATATATCGATTGTT+GGG | 0.458335 | 1_3:+68567181 | None:intergenic |
| CCGGAGAGGGGAGAGAGAAA+GGG | 0.459622 | 1_3:-68571585 | Msa0136560:five_prime_UTR |
| AATTAGAAACCAAGAATCAA+TGG | 0.462371 | 1_3:-68569291 | Msa0136560:intron |
| AAAGTGCATGGCCAGAACTA+TGG | 0.469079 | 1_3:+68568829 | None:intergenic |
| AATACTTACAAATTGGAGAA+AGG | 0.479211 | 1_3:+68567627 | None:intergenic |
| CCATATAGCAAAACAAACAT+TGG | 0.479630 | 1_3:+68568304 | None:intergenic |
| CCCCGGAAATGCATCATTGT+AGG | 0.482193 | 1_3:-68567346 | Msa0136560:three_prime_UTR |
| GCTGGAGTGATCATATTTGT+CGG | 0.487410 | 1_3:+68567475 | None:intergenic |
| ATGTTCATAAAGTATCTAGA+AGG | 0.490832 | 1_3:+68567507 | None:intergenic |
| TTGATAATTCTGCGGAGGTA+AGG | 0.492063 | 1_3:+68571375 | None:intergenic |
| TGTTCAACCACATAACTGTT+TGG | 0.493819 | 1_3:+68568605 | None:intergenic |
| CCGAAGCAAGGTACCGGAGA+GGG | 0.497725 | 1_3:-68571598 | Msa0136560:five_prime_UTR |
| CATATAGCAAAACAAACATT+GGG | 0.498728 | 1_3:+68568305 | None:intergenic |
| TTACCTCCGCAGAATTATCA+AGG | 0.501424 | 1_3:-68571373 | Msa0136560:intron |
| GGGTCGAGAGGAAGATGAAG+AGG | 0.502177 | 1_3:+68571413 | None:intergenic |
| TTACTACACCAATTGGATAC+AGG | 0.505412 | 1_3:+68567654 | None:intergenic |
| TAAGGAAGAAGAGTGGAATT+GGG | 0.507072 | 1_3:+68571393 | None:intergenic |
| AAGAGTGGAATTGGGTCGAG+AGG | 0.513571 | 1_3:+68571401 | None:intergenic |
| GACCAGTCCGTGTCCTGTTG+AGG | 0.516351 | 1_3:-68567442 | Msa0136560:three_prime_UTR |
| ATTAGAAACCAAGAATCAAT+GGG | 0.517637 | 1_3:-68569290 | Msa0136560:intron |
| AACCTCAACAGGACACGGAC+TGG | 0.533895 | 1_3:+68567440 | None:intergenic |
| CTGTTGAGGTTCTGAAGTAA+TGG | 0.538216 | 1_3:-68567428 | Msa0136560:three_prime_UTR |
| CTGAGTCCGAAGCAAGGTAC+CGG | 0.539109 | 1_3:-68571604 | Msa0136560:five_prime_UTR |
| CTAAATTTCTTAGGTTACGA+TGG | 0.539350 | 1_3:-68568085 | Msa0136560:intron |
| TAATTCTTATCTTCGAGAAG+AGG | 0.547601 | 1_3:-68568630 | Msa0136560:CDS |
| TTTGGCCCAAGTTAACATAG+TGG | 0.550327 | 1_3:-68571662 | None:intergenic |
| CGAAGCAAGGTACCGGAGAG+GGG | 0.550670 | 1_3:-68571597 | Msa0136560:five_prime_UTR |
| GTTTGACGAACGCAATACCC+CGG | 0.558320 | 1_3:-68567363 | Msa0136560:three_prime_UTR |
| AAGTTGCAACAGCCAAAAGA+AGG | 0.559727 | 1_3:+68569233 | None:intergenic |
| ATCAAATCTATTATTCATGG+TGG | 0.570031 | 1_3:-68568128 | Msa0136560:CDS |
| GAGCGTCCTTTCGAAACTGT+TGG | 0.575354 | 1_3:+68571447 | None:intergenic |
| AATCGATATATTCTTTCATG+AGG | 0.584441 | 1_3:-68567175 | Msa0136560:three_prime_UTR |
| TTCAGAACCTCAACAGGACA+CGG | 0.590512 | 1_3:+68567435 | None:intergenic |
| TCAAATCTATTATTCATGGT+GGG | 0.597237 | 1_3:-68568127 | Msa0136560:CDS |
| TGGTTGAACAGCGTGTTGAA+TGG | 0.609570 | 1_3:-68568592 | Msa0136560:intron |
| AGAGGCTCCAAACAGTTATG+TGG | 0.616391 | 1_3:-68568612 | Msa0136560:CDS |
| ATGGAGGCTACAATATGAGA+AGG | 0.618334 | 1_3:-68567409 | Msa0136560:three_prime_UTR |
| TTGAGGTTCTGAAGTAATGG+AGG | 0.622168 | 1_3:-68567425 | Msa0136560:three_prime_UTR |
| ATGTTACCAACAGTTTCGAA+AGG | 0.623237 | 1_3:-68571453 | Msa0136560:CDS |
| TGCAGATCACAACAAATGCA+GGG | 0.638452 | 1_3:+68569257 | None:intergenic |
| AGAATATATCGATTGTTGGG+AGG | 0.643666 | 1_3:+68567184 | None:intergenic |
| GTACCTTGATAATTCTGCGG+AGG | 0.646223 | 1_3:+68571370 | None:intergenic |
| TCTGATCTGAGTCCGAAGCA+AGG | 0.651038 | 1_3:-68571610 | Msa0136560:five_prime_UTR |
| TGGGTACCTTGATAATTCTG+CGG | 0.658546 | 1_3:+68571367 | None:intergenic |
| GCGGAGGTAAGGAAGAAGAG+TGG | 0.669478 | 1_3:+68571386 | None:intergenic |
| ACTCAGATCAGAGATGAACA+AGG | 0.677067 | 1_3:+68571621 | None:intergenic |
| TCCGAAGCAAGGTACCGGAG+AGG | 0.702425 | 1_3:-68571599 | Msa0136560:five_prime_UTR |
| CCTACAATGATGCATTTCCG+GGG | 0.733756 | 1_3:+68567346 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATTTAATCAAATAAAAT+AGG | + | chr1_3:68568764-68568783 | None:intergenic | 10.0% |
| !!! | AATGGATTTTTCTAAATAAA+AGG | + | chr1_3:68567878-68567897 | None:intergenic | 15.0% |
| !! | AAAAAGTAGATAATAGAAAA+TGG | + | chr1_3:68567896-68567915 | None:intergenic | 15.0% |
| !! | CATTATAATCCAAAATATTA+AGG | + | chr1_3:68568190-68568209 | None:intergenic | 15.0% |
| !! | AAAATCATAATATTCTCATT+AGG | - | chr1_3:68568356-68568375 | Msa0136560:intron | 15.0% |
| !!! | ATTTTGTTTTCTTTTCAATT+TGG | - | chr1_3:68568430-68568449 | Msa0136560:intron | 15.0% |
| !!! | AATTTTATTATTCATTGTAG+TGG | - | chr1_3:68568575-68568594 | Msa0136560:intron | 15.0% |
| !!! | TAAACAAAGCCTTAATATTT+TGG | - | chr1_3:68568178-68568197 | Msa0136560:CDS | 20.0% |
| !!! | TTGGATTATAATGTTTTGAA+TGG | - | chr1_3:68568197-68568216 | Msa0136560:intron | 20.0% |
| !! | TCTTGATGTTAAAAAAATGA+TGG | + | chr1_3:68568693-68568712 | None:intergenic | 20.0% |
| !!! | TCTGTATTGTTTTGATTTAT+TGG | - | chr1_3:68568982-68569001 | Msa0136560:intron | 20.0% |
| !! | AATTAACTGCAACATTTAAA+TGG | + | chr1_3:68569288-68569307 | None:intergenic | 20.0% |
| !!! | TATTTGGTCAAATGTTATTT+AGG | - | chr1_3:68570296-68570315 | Msa0136560:intron | 20.0% |
| !! | AAAAACATCTTGAATTTAAG+TGG | - | chr1_3:68570548-68570567 | Msa0136560:intron | 20.0% |
| !! | TACCATTATCTAAATTTCTT+AGG | - | chr1_3:68570687-68570706 | Msa0136560:intron | 20.0% |
| !! | AACCTAAGAAATTTAGATAA+TGG | + | chr1_3:68570692-68570711 | None:intergenic | 20.0% |
| !! | CACATTAAATACTTACAAAT+TGG | + | chr1_3:68571164-68571183 | None:intergenic | 20.0% |
| !! | ATCACTGAAAATAAGAAATT+GGG | + | chr1_3:68571238-68571257 | None:intergenic | 20.0% |
| !! | AATCACTGAAAATAAGAAAT+TGG | + | chr1_3:68571239-68571258 | None:intergenic | 20.0% |
| ! | AAGTGAATTAGCGAAATTAA+GGG | + | chr1_3:68567468-68567487 | None:intergenic | 25.0% |
| ! | TAAAAGCGAACACATAATTT+AGG | + | chr1_3:68567680-68567699 | None:intergenic | 25.0% |
| ! | AATTAGAAGATGTTAGAATC+TGG | - | chr1_3:68567706-68567725 | Msa0136560:intron | 25.0% |
| ! | TAAATAAAAGGTTCACACAA+AGG | + | chr1_3:68567866-68567885 | None:intergenic | 25.0% |
| !! | GTTTTCTTTTCAATTTGGTA+TGG | - | chr1_3:68568435-68568454 | Msa0136560:intron | 25.0% |
| ! | AAAATAATAAGTATAGCGCA+AGG | + | chr1_3:68568490-68568509 | None:intergenic | 25.0% |
| ! | TAAAATTACAGAGAACGAAA+AGG | + | chr1_3:68568562-68568581 | None:intergenic | 25.0% |
| !! | CTATATACTTACACAACTTT+TGG | + | chr1_3:68568655-68568674 | None:intergenic | 25.0% |
| !!! | TATTGGTACATGTTTTAAAC+AGG | - | chr1_3:68568999-68569018 | Msa0136560:intron | 25.0% |
| !!! | ATTGGTACATGTTTTAAACA+GGG | - | chr1_3:68569000-68569019 | Msa0136560:intron | 25.0% |
| ! | GGATAATTAATTGCAGATAA+AGG | + | chr1_3:68569085-68569104 | None:intergenic | 25.0% |
| ! | GTGTTAGCATAGAAAATAAA+GGG | - | chr1_3:68569139-68569158 | Msa0136560:intron | 25.0% |
| ! | TGTTAGCATAGAAAATAAAG+GGG | - | chr1_3:68569140-68569159 | Msa0136560:intron | 25.0% |
| ! | GAGAAATATCTTGCATAAAT+TGG | - | chr1_3:68569180-68569199 | Msa0136560:intron | 25.0% |
| ! | AAATATCTTGCATAAATTGG+AGG | - | chr1_3:68569183-68569202 | Msa0136560:intron | 25.0% |
| !! | TGCAGTTAATTCTTTTGATA+AGG | - | chr1_3:68569297-68569316 | Msa0136560:intron | 25.0% |
| ! | ATGTAACTATATAGTGTTTC+AGG | - | chr1_3:68569373-68569392 | Msa0136560:intron | 25.0% |
| ! | AATTAGAAACCAAGAATCAA+TGG | - | chr1_3:68569490-68569509 | Msa0136560:intron | 25.0% |
| ! | ATTAGAAACCAAGAATCAAT+GGG | - | chr1_3:68569491-68569510 | Msa0136560:intron | 25.0% |
| ! | TTTGTTGCTCATATATTTAG+TGG | - | chr1_3:68569700-68569719 | Msa0136560:intron | 25.0% |
| !! | GTAACATGTTTCTATAAGAA+TGG | + | chr1_3:68569749-68569768 | None:intergenic | 25.0% |
| !! | TAATTTTCCCATTCATTTTC+AGG | - | chr1_3:68569924-68569943 | Msa0136560:intron | 25.0% |
| ! | AATCTAATGACTTGAAGAAA+AGG | + | chr1_3:68570076-68570095 | None:intergenic | 25.0% |
| !!! | ATTATATCTTTGGTTTTCCA+TGG | - | chr1_3:68570414-68570433 | Msa0136560:intron | 25.0% |
| ! | CATATAGCAAAACAAACATT+GGG | + | chr1_3:68570479-68570498 | None:intergenic | 25.0% |
| ! | ATAACAATTCATACTAACTG+AGG | + | chr1_3:68570515-68570534 | None:intergenic | 25.0% |
| ! | AGTATGAATTGTTATGATGT+TGG | - | chr1_3:68570520-68570539 | Msa0136560:intron | 25.0% |
| ! | ATAGAGGAGATAGAAAATAA+TGG | + | chr1_3:68570602-68570621 | None:intergenic | 25.0% |
| !! | TTATTTTCTATCTCCTCTAT+TGG | - | chr1_3:68570602-68570621 | Msa0136560:intron | 25.0% |
| !! | AATAGATTTGATAGCAATTC+TGG | + | chr1_3:68570645-68570664 | None:intergenic | 25.0% |
| ! | GCTATCAAATCTATTATTCA+TGG | - | chr1_3:68570650-68570669 | Msa0136560:intron | 25.0% |
| ! | ATCAAATCTATTATTCATGG+TGG | - | chr1_3:68570653-68570672 | Msa0136560:intron | 25.0% |
| ! | TCAAATCTATTATTCATGGT+GGG | - | chr1_3:68570654-68570673 | Msa0136560:intron | 25.0% |
| ! | TGATGCTTCAAAAGTTTAAT+TGG | + | chr1_3:68570894-68570913 | None:intergenic | 25.0% |
| ! | AAAACACCAAAAACAATACT+CGG | + | chr1_3:68570944-68570963 | None:intergenic | 25.0% |
| ! | ATTCAGAGCTATACATATTT+GGG | + | chr1_3:68571021-68571040 | None:intergenic | 25.0% |
| ! | AATTCAGAGCTATACATATT+TGG | + | chr1_3:68571022-68571041 | None:intergenic | 25.0% |
| !!! | AAATATGTATAGCTCTGAAT+TGG | - | chr1_3:68571021-68571040 | Msa0136560:intron | 25.0% |
| ! | AATACTTACAAATTGGAGAA+AGG | + | chr1_3:68571157-68571176 | None:intergenic | 25.0% |
| !! | TTATTTTCAGTGATTTTGAG+TGG | - | chr1_3:68571244-68571263 | Msa0136560:intron | 25.0% |
| !! | ATGTTCATAAAGTATCTAGA+AGG | + | chr1_3:68571277-68571296 | None:intergenic | 25.0% |
| ! | CTAAAATTTCTTTGTCAACT+CGG | - | chr1_3:68571567-68571586 | Msa0136560:five_prime_UTR | 25.0% |
| !! | GAAAGAATATATCGATTGTT+GGG | + | chr1_3:68571603-68571622 | None:intergenic | 25.0% |
| !! | TGAAAGAATATATCGATTGT+TGG | + | chr1_3:68571604-68571623 | None:intergenic | 25.0% |
| ! | AATCGATATATTCTTTCATG+AGG | - | chr1_3:68571606-68571625 | Msa0136560:five_prime_UTR | 25.0% |
| AAGAAATGAAGAGATCAGTT+GGG | + | chr1_3:68567436-68567455 | None:intergenic | 30.0% | |
| GAAGTGAATTAGCGAAATTA+AGG | + | chr1_3:68567469-68567488 | None:intergenic | 30.0% | |
| AACAGCATTTGCAATGAAAT+GGG | + | chr1_3:68567504-68567523 | None:intergenic | 30.0% | |
| TCAATAATTCATGAACTGAG+CGG | + | chr1_3:68567603-68567622 | None:intergenic | 30.0% | |
| !!! | ATCTACTTTTTTGTGTGAAC+CGG | - | chr1_3:68567905-68567924 | Msa0136560:intron | 30.0% |
| ! | TTCTTTTCAATTTGGTATGG+AGG | - | chr1_3:68568438-68568457 | Msa0136560:intron | 30.0% |
| !!! | TTTGCTGTATTTTTTGACTC+AGG | - | chr1_3:68568521-68568540 | Msa0136560:intron | 30.0% |
| ! | TGGATGTTGAATACACTTTT+TGG | - | chr1_3:68568605-68568624 | Msa0136560:CDS | 30.0% |
| !!! | CGTTTTTTGTACACTTGATA+TGG | - | chr1_3:68568892-68568911 | Msa0136560:intron | 30.0% |
| !! | TACATGTTTTAAACAGGGTT+TGG | - | chr1_3:68569005-68569024 | Msa0136560:intron | 30.0% |
| CGTGTTAGCATAGAAAATAA+AGG | - | chr1_3:68569138-68569157 | Msa0136560:intron | 30.0% | |
| TTTACATTTGTAGAACAACC+AGG | - | chr1_3:68569656-68569675 | Msa0136560:intron | 30.0% | |
| TCACACTAGTTATATATTCC+TGG | + | chr1_3:68569677-68569696 | None:intergenic | 30.0% | |
| TTGCTCATATATTTAGTGGT+AGG | - | chr1_3:68569704-68569723 | Msa0136560:intron | 30.0% | |
| TGCTCATATATTTAGTGGTA+GGG | - | chr1_3:68569705-68569724 | Msa0136560:intron | 30.0% | |
| CATGTTACCACTTTAAACTT+TGG | - | chr1_3:68569761-68569780 | Msa0136560:intron | 30.0% | |
| ACACATTCCAAAGTTTAAAG+TGG | + | chr1_3:68569771-68569790 | None:intergenic | 30.0% | |
| ! | TTAATCGTGAATATTGACTG+TGG | - | chr1_3:68569800-68569819 | Msa0136560:intron | 30.0% |
| GGCACTTAATGAACTAAATA+GGG | + | chr1_3:68569871-68569890 | None:intergenic | 30.0% | |
| ! | CTATTCCATTTTCTATTGAC+TGG | - | chr1_3:68569995-68570014 | Msa0136560:intron | 30.0% |
| ATATGCCAGTCAATAGAAAA+TGG | + | chr1_3:68570003-68570022 | None:intergenic | 30.0% | |
| !!! | TATTTCTGGCAACTTTTTGT+TGG | - | chr1_3:68570020-68570039 | Msa0136560:intron | 30.0% |
| ATAAGAATTAGTTAGGAACC+TGG | + | chr1_3:68570141-68570160 | None:intergenic | 30.0% | |
| CTCGAAGATAAGAATTAGTT+AGG | + | chr1_3:68570148-68570167 | None:intergenic | 30.0% | |
| TAATTCTTATCTTCGAGAAG+AGG | - | chr1_3:68570151-68570170 | Msa0136560:CDS | 30.0% | |
| TGAGTCAACATAATGAAAAC+TGG | + | chr1_3:68570235-68570254 | None:intergenic | 30.0% | |
| ! | GGTCAAATGTTATTTAGGAA+AGG | - | chr1_3:68570301-68570320 | Msa0136560:intron | 30.0% |
| CCAAAGATATAATCAGCAAT+TGG | + | chr1_3:68570407-68570426 | None:intergenic | 30.0% | |
| ! | CCAATTGCTGATTATATCTT+TGG | - | chr1_3:68570404-68570423 | Msa0136560:intron | 30.0% |
| CCATATAGCAAAACAAACAT+TGG | + | chr1_3:68570480-68570499 | None:intergenic | 30.0% | |
| !!! | CCAATGTTTGTTTTGCTATA+TGG | - | chr1_3:68570477-68570496 | Msa0136560:intron | 30.0% |
| !! | ATTTAAGTGGTACTGATATC+TGG | - | chr1_3:68570561-68570580 | Msa0136560:intron | 30.0% |
| CTAAATTTCTTAGGTTACGA+TGG | - | chr1_3:68570696-68570715 | Msa0136560:intron | 30.0% | |
| ACAATGTCTTATGGCTATAA+AGG | - | chr1_3:68570804-68570823 | Msa0136560:intron | 30.0% | |
| !!! | TTTTGAAGCATCAGTGATTT+TGG | - | chr1_3:68570901-68570920 | Msa0136560:intron | 30.0% |
| !!! | GTGTTTTTCTAAAATCCCTT+TGG | - | chr1_3:68570957-68570976 | Msa0136560:intron | 30.0% |
| CAGATTGTGTAAAACAGAAA+TGG | + | chr1_3:68571191-68571210 | None:intergenic | 30.0% | |
| ACAATATGAGAAGGCTTAAA+TGG | - | chr1_3:68571381-68571400 | Msa0136560:CDS | 30.0% | |
| ATGTTACCAACAGTTTCGAA+AGG | - | chr1_3:68567328-68567347 | Msa0136560:three_prime_UTR | 35.0% | |
| TAAGGAAGAAGAGTGGAATT+GGG | + | chr1_3:68567391-68567410 | None:intergenic | 35.0% | |
| GAAGAAATGAAGAGATCAGT+TGG | + | chr1_3:68567437-68567456 | None:intergenic | 35.0% | |
| TTTGCAATGAAATGGGGAAT+CGG | + | chr1_3:68567497-68567516 | None:intergenic | 35.0% | |
| ACAGCATTTGCAATGAAATG+GGG | + | chr1_3:68567503-68567522 | None:intergenic | 35.0% | |
| CAACAGCATTTGCAATGAAA+TGG | + | chr1_3:68567505-68567524 | None:intergenic | 35.0% | |
| TTGCAAATGCTGTTGAATTG+TGG | - | chr1_3:68567510-68567529 | Msa0136560:CDS | 35.0% | |
| GGCGCAATATTATAAACCAT+AGG | - | chr1_3:68567531-68567550 | Msa0136560:intron | 35.0% | |
| !!! | TCTACTTTTTTGTGTGAACC+GGG | - | chr1_3:68567906-68567925 | Msa0136560:intron | 35.0% |
| ! | TGCTTTTCCTTCATTTTCCA+CGG | + | chr1_3:68568323-68568342 | None:intergenic | 35.0% |
| ! | GAAGGAAAAGCATAATGTAG+CGG | - | chr1_3:68568331-68568350 | Msa0136560:CDS | 35.0% |
| TTAGGAAAATTACCGTTAGC+TGG | - | chr1_3:68568374-68568393 | Msa0136560:intron | 35.0% | |
| TTCATTGTAGTGGCAACAAA+TGG | - | chr1_3:68568585-68568604 | Msa0136560:intron | 35.0% | |
| AAACACATACACAACCAAAG+GGG | + | chr1_3:68568843-68568862 | None:intergenic | 35.0% | |
| CAAACACATACACAACCAAA+GGG | + | chr1_3:68568844-68568863 | None:intergenic | 35.0% | |
| ATACAGATATTCGTGAGAAG+TGG | + | chr1_3:68568969-68568988 | None:intergenic | 35.0% | |
| TAATTATCCACAGTGCACTA+TGG | - | chr1_3:68569096-68569115 | Msa0136560:intron | 35.0% | |
| TGCATAAATTGGAGGAAACA+CGG | - | chr1_3:68569191-68569210 | Msa0136560:intron | 35.0% | |
| ! | TCTTTTGATAAGGAGCTCTA+AGG | - | chr1_3:68569307-68569326 | Msa0136560:intron | 35.0% |
| ! | CTAAGGAACTTTGGCTTATT+AGG | - | chr1_3:68569324-68569343 | Msa0136560:intron | 35.0% |
| ! | CGTAAGTTTCTCATGCATTT+TGG | - | chr1_3:68569586-68569605 | Msa0136560:intron | 35.0% |
| ! | AAGTTTCTCATGCATTTTGG+CGG | - | chr1_3:68569589-68569608 | Msa0136560:intron | 35.0% |
| TAGCTAGTCATCTAATCATG+AGG | + | chr1_3:68569623-68569642 | None:intergenic | 35.0% | |
| GGGCACTTAATGAACTAAAT+AGG | + | chr1_3:68569872-68569891 | None:intergenic | 35.0% | |
| GGTCATACCTGAAAATGAAT+GGG | + | chr1_3:68569934-68569953 | None:intergenic | 35.0% | |
| TGGTCATACCTGAAAATGAA+TGG | + | chr1_3:68569935-68569954 | None:intergenic | 35.0% | |
| ! | AGAAGACAACAAAAAGTGCA+TGG | + | chr1_3:68569967-68569986 | None:intergenic | 35.0% |
| ! | TCTATTGACTGGCATATTTC+TGG | - | chr1_3:68570006-68570025 | Msa0136560:intron | 35.0% |
| ! | TTTTGACCCATATATTCTCC+AGG | - | chr1_3:68570120-68570139 | Msa0136560:intron | 35.0% |
| TAGGAACCTGGAGAATATAT+GGG | + | chr1_3:68570129-68570148 | None:intergenic | 35.0% | |
| TTAGGAACCTGGAGAATATA+TGG | + | chr1_3:68570130-68570149 | None:intergenic | 35.0% | |
| TGTTCAACCACATAACTGTT+TGG | + | chr1_3:68570179-68570198 | None:intergenic | 35.0% | |
| !!! | TATCTTTGGTTTTCCATGGA+AGG | - | chr1_3:68570418-68570437 | Msa0136560:intron | 35.0% |
| ! | TTTTCTATCTCCTCTATTGG+TGG | - | chr1_3:68570605-68570624 | Msa0136560:intron | 35.0% |
| TTTCTTAGGTTACGATGGTA+AGG | - | chr1_3:68570701-68570720 | Msa0136560:intron | 35.0% | |
| TTGTTAGTGTGTTGTATCCT+TGG | - | chr1_3:68570761-68570780 | Msa0136560:intron | 35.0% | |
| TGTTAGTGTGTTGTATCCTT+GGG | - | chr1_3:68570762-68570781 | Msa0136560:intron | 35.0% | |
| GTCTCGTAAACAATGTCTTA+TGG | - | chr1_3:68570795-68570814 | Msa0136560:intron | 35.0% | |
| TGTCTTATGGCTATAAAGGA+TGG | - | chr1_3:68570808-68570827 | Msa0136560:intron | 35.0% | |
| GTCTTATGGCTATAAAGGAT+GGG | - | chr1_3:68570809-68570828 | Msa0136560:intron | 35.0% | |
| !! | TTTGCACCGAGTATTGTTTT+TGG | - | chr1_3:68570935-68570954 | Msa0136560:intron | 35.0% |
| AGAACGCATGTTAAAGTTCT+TGG | - | chr1_3:68570984-68571003 | Msa0136560:intron | 35.0% | |
| !! | ATGTATAGCTCTGAATTGGA+AGG | - | chr1_3:68571025-68571044 | Msa0136560:intron | 35.0% |
| GACTAATTGATTGACATCTG+TGG | - | chr1_3:68571067-68571086 | Msa0136560:intron | 35.0% | |
| AATTGGATACAGGAAAAAGG+TGG | + | chr1_3:68571120-68571139 | None:intergenic | 35.0% | |
| ! | ACCTTTTTCCTGTATCCAAT+TGG | - | chr1_3:68571119-68571138 | Msa0136560:intron | 35.0% |
| ACCAATTGGATACAGGAAAA+AGG | + | chr1_3:68571123-68571142 | None:intergenic | 35.0% | |
| TTACTACACCAATTGGATAC+AGG | + | chr1_3:68571130-68571149 | None:intergenic | 35.0% | |
| AGGACAATTACTACACCAAT+TGG | + | chr1_3:68571137-68571156 | None:intergenic | 35.0% | |
| ! | CTTCGATTGATAGTAGTAGA+AGG | + | chr1_3:68571461-68571480 | None:intergenic | 35.0% |
| ! | AGAATATATCGATTGTTGGG+AGG | + | chr1_3:68571600-68571619 | None:intergenic | 35.0% |
| ACTCAGATCAGAGATGAACA+AGG | + | chr1_3:68567163-68567182 | None:intergenic | 40.0% | |
| GTAAGGAAGAAGAGTGGAAT+TGG | + | chr1_3:68567392-68567411 | None:intergenic | 40.0% | |
| ! | TTGATAATTCTGCGGAGGTA+AGG | + | chr1_3:68567409-68567428 | None:intergenic | 40.0% |
| TTACCTCCGCAGAATTATCA+AGG | - | chr1_3:68567408-68567427 | Msa0136560:three_prime_UTR | 40.0% | |
| ! | TGGGTACCTTGATAATTCTG+CGG | + | chr1_3:68567417-68567436 | None:intergenic | 40.0% |
| !! | TGGTGCTTTTCTGGGAATAA+TGG | - | chr1_3:68567765-68567784 | Msa0136560:intron | 40.0% |
| ATCTCTTCCAGTTTAACCAG+GGG | + | chr1_3:68568055-68568074 | None:intergenic | 40.0% | |
| GATCTCTTCCAGTTTAACCA+GGG | + | chr1_3:68568056-68568075 | None:intergenic | 40.0% | |
| ! | TTTTGAATGGTGTGTGTGTG+TGG | - | chr1_3:68568210-68568229 | Msa0136560:intron | 40.0% |
| ATAATAGTCTCATGCCCCAA+TGG | - | chr1_3:68568267-68568286 | Msa0136560:intron | 40.0% | |
| TTCTATTCCCTACACCATTG+GGG | + | chr1_3:68568284-68568303 | None:intergenic | 40.0% | |
| CTTCTATTCCCTACACCATT+GGG | + | chr1_3:68568285-68568304 | None:intergenic | 40.0% | |
| TCTTCTATTCCCTACACCAT+TGG | + | chr1_3:68568286-68568305 | None:intergenic | 40.0% | |
| TGAGATACCGTGGAAAATGA+AGG | - | chr1_3:68568313-68568332 | Msa0136560:CDS | 40.0% | |
| GTAAAACTGACACCAGCTAA+CGG | + | chr1_3:68568389-68568408 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTGCATGAGGTCA+TGG | + | chr1_3:68568735-68568754 | None:intergenic | 40.0% |
| ! | CCTCATATTGTTGTTGCATG+AGG | + | chr1_3:68568741-68568760 | None:intergenic | 40.0% |
| CCTCATGCAACAACAATATG+AGG | - | chr1_3:68568738-68568757 | Msa0136560:intron | 40.0% | |
| TAAATGTACCACCAAACGCA+TGG | - | chr1_3:68568776-68568795 | Msa0136560:CDS | 40.0% | |
| CTCAACCAACCATCAGTTTA+TGG | + | chr1_3:68568802-68568821 | None:intergenic | 40.0% | |
| CCAAACACATACACAACCAA+AGG | + | chr1_3:68568845-68568864 | None:intergenic | 40.0% | |
| CCTTTGGTTGTGTATGTGTT+TGG | - | chr1_3:68568842-68568861 | Msa0136560:intron | 40.0% | |
| CTTGATATGGAACTGTGCAA+TGG | - | chr1_3:68568905-68568924 | Msa0136560:intron | 40.0% | |
| GGATAGAGGGGAATAATGAT+GGG | - | chr1_3:68569212-68569231 | Msa0136560:intron | 40.0% | |
| !! | TAAGGAGCTCTAAGGAACTT+TGG | - | chr1_3:68569315-68569334 | Msa0136560:intron | 40.0% |
| GCTTGCACATGAACTTTGTT+TGG | - | chr1_3:68569346-68569365 | Msa0136560:intron | 40.0% | |
| TGCAGATCACAACAAATGCA+GGG | + | chr1_3:68569527-68569546 | None:intergenic | 40.0% | |
| AAGTTGCAACAGCCAAAAGA+AGG | + | chr1_3:68569551-68569570 | None:intergenic | 40.0% | |
| !! | TCTTTTGGCTGTTGCAACTT+TGG | - | chr1_3:68569551-68569570 | Msa0136560:intron | 40.0% |
| TTAGTTCATTAAGTGCCCCT+AGG | - | chr1_3:68569874-68569893 | Msa0136560:intron | 40.0% | |
| TAGTTCATTAAGTGCCCCTA+GGG | - | chr1_3:68569875-68569894 | Msa0136560:intron | 40.0% | |
| TTCAGGTATGACCATAGTTC+TGG | - | chr1_3:68569941-68569960 | Msa0136560:intron | 40.0% | |
| TCAGAGCATGCACTACTATT+TGG | - | chr1_3:68570280-68570299 | Msa0136560:intron | 40.0% | |
| !!! | GGTACTGATATCTGGTCTTT+TGG | - | chr1_3:68570569-68570588 | Msa0136560:intron | 40.0% |
| ! | AAGGATGGGTTTCGTTACTT+AGG | - | chr1_3:68570823-68570842 | Msa0136560:intron | 40.0% |
| ACATGCGTTCTCATTCCAAA+GGG | + | chr1_3:68570975-68570994 | None:intergenic | 40.0% | |
| AACATGCGTTCTCATTCCAA+AGG | + | chr1_3:68570976-68570995 | None:intergenic | 40.0% | |
| GCTGGAGTGATCATATTTGT+CGG | + | chr1_3:68571309-68571328 | None:intergenic | 40.0% | |
| !! | GACTGGTCAAAAGTTTTAGC+TGG | + | chr1_3:68571327-68571346 | None:intergenic | 40.0% |
| CATTACTTCAGAACCTCAAC+AGG | + | chr1_3:68571355-68571374 | None:intergenic | 40.0% | |
| !! | CTGTTGAGGTTCTGAAGTAA+TGG | - | chr1_3:68571353-68571372 | Msa0136560:intron | 40.0% |
| !! | TTGAGGTTCTGAAGTAATGG+AGG | - | chr1_3:68571356-68571375 | Msa0136560:intron | 40.0% |
| ATGGAGGCTACAATATGAGA+AGG | - | chr1_3:68571372-68571391 | Msa0136560:intron | 40.0% | |
| GATCGTTTCCGTAGCTGAAA+CGG | - | chr1_3:68567280-68567299 | Msa0136560:three_prime_UTR | 45.0% | |
| GATTCGATCCGTTTCAGCTA+CGG | + | chr1_3:68567291-68567310 | None:intergenic | 45.0% | |
| ! | GTACCTTGATAATTCTGCGG+AGG | + | chr1_3:68567414-68567433 | None:intergenic | 45.0% |
| GAGGGGTCAATCTAATCCTA+TGG | + | chr1_3:68567550-68567569 | None:intergenic | 45.0% | |
| AGTGCTCAAGTAATCACGAG+GGG | + | chr1_3:68567567-68567586 | None:intergenic | 45.0% | |
| CAGTGCTCAAGTAATCACGA+GGG | + | chr1_3:68567568-68567587 | None:intergenic | 45.0% | |
| ACAGTGCTCAAGTAATCACG+AGG | + | chr1_3:68567569-68567588 | None:intergenic | 45.0% | |
| CTGGAAGTGATCCATTGTGA+TGG | - | chr1_3:68567725-68567744 | Msa0136560:intron | 45.0% | |
| ! | TGGTAGGTATGGTGCTTTTC+TGG | - | chr1_3:68567756-68567775 | Msa0136560:intron | 45.0% |
| ! | GGTAGGTATGGTGCTTTTCT+GGG | - | chr1_3:68567757-68567776 | Msa0136560:intron | 45.0% |
| GTCTTAACAGTTGCGCACAA+AGG | + | chr1_3:68567935-68567954 | None:intergenic | 45.0% | |
| AGCTGTGTTAAATCCCTTGG+GGG | + | chr1_3:68568002-68568021 | None:intergenic | 45.0% | |
| CAGCTGTGTTAAATCCCTTG+GGG | + | chr1_3:68568003-68568022 | None:intergenic | 45.0% | |
| GCAGCTGTGTTAAATCCCTT+GGG | + | chr1_3:68568004-68568023 | None:intergenic | 45.0% | |
| TGCAGCTGTGTTAAATCCCT+TGG | + | chr1_3:68568005-68568024 | None:intergenic | 45.0% | |
| GGATCTCTTCCAGTTTAACC+AGG | + | chr1_3:68568057-68568076 | None:intergenic | 45.0% | |
| CCACATGGATGAGATGGTAA+GGG | + | chr1_3:68568078-68568097 | None:intergenic | 45.0% | |
| ACCACATGGATGAGATGGTA+AGG | + | chr1_3:68568079-68568098 | None:intergenic | 45.0% | |
| ACAAGACCACATGGATGAGA+TGG | + | chr1_3:68568084-68568103 | None:intergenic | 45.0% | |
| ATAGACTGCACAAGACCACA+TGG | + | chr1_3:68568093-68568112 | None:intergenic | 45.0% | |
| ATGGTGTGCTTCGTATGGTA+CGG | - | chr1_3:68568236-68568255 | Msa0136560:intron | 45.0% | |
| ! | AGAGAAAGTGTGAGATACCG+TGG | - | chr1_3:68568303-68568322 | Msa0136560:intron | 45.0% |
| TCAGTTTATGGCCATGCGTT+TGG | + | chr1_3:68568790-68568809 | None:intergenic | 45.0% | |
| AACGCATGGCCATAAACTGA+TGG | - | chr1_3:68568790-68568809 | Msa0136560:CDS | 45.0% | |
| CATGGCCATAAACTGATGGT+TGG | - | chr1_3:68568794-68568813 | Msa0136560:CDS | 45.0% | |
| ! | TTGGTCAGTGACGTTTGTTG+AGG | - | chr1_3:68569024-68569043 | Msa0136560:intron | 45.0% |
| ! | TGGTCAGTGACGTTTGTTGA+GGG | - | chr1_3:68569025-68569044 | Msa0136560:intron | 45.0% |
| GTAACTACCATAGTGCACTG+TGG | + | chr1_3:68569106-68569125 | None:intergenic | 45.0% | |
| ATTGGAGGAAACACGGATAG+AGG | - | chr1_3:68569198-68569217 | Msa0136560:intron | 45.0% | |
| TTGGAGGAAACACGGATAGA+GGG | - | chr1_3:68569199-68569218 | Msa0136560:intron | 45.0% | |
| CGGATAGAGGGGAATAATGA+TGG | - | chr1_3:68569211-68569230 | Msa0136560:intron | 45.0% | |
| CTGCAGATCACAACAAATGC+AGG | + | chr1_3:68569528-68569547 | None:intergenic | 45.0% | |
| ! | TGTGATCTGCAGCCTTCTTT+TGG | - | chr1_3:68569536-68569555 | Msa0136560:intron | 45.0% |
| AGTTCATTAAGTGCCCCTAG+GGG | - | chr1_3:68569876-68569895 | Msa0136560:intron | 45.0% | |
| AATGTTAGCAGATGCCCCTA+GGG | + | chr1_3:68569893-68569912 | None:intergenic | 45.0% | |
| AAATGTTAGCAGATGCCCCT+AGG | + | chr1_3:68569894-68569913 | None:intergenic | 45.0% | |
| AAAGTGCATGGCCAGAACTA+TGG | + | chr1_3:68569955-68569974 | None:intergenic | 45.0% | |
| ! | CTGGCAACTTTTTGTTGGTG+AGG | - | chr1_3:68570025-68570044 | Msa0136560:intron | 45.0% |
| AGAGGCTCCAAACAGTTATG+TGG | - | chr1_3:68570169-68570188 | Msa0136560:CDS | 45.0% | |
| TGGTTGAACAGCGTGTTGAA+TGG | - | chr1_3:68570189-68570208 | Msa0136560:CDS | 45.0% | |
| CAAACGCATACATCCTTCCA+TGG | + | chr1_3:68570434-68570453 | None:intergenic | 45.0% | |
| AAACCATGAGCCACCAATAG+AGG | + | chr1_3:68570618-68570637 | None:intergenic | 45.0% | |
| GGGTTTCGTTACTTAGGTCT+TGG | - | chr1_3:68570829-68570848 | Msa0136560:intron | 45.0% | |
| !! | GGTTGTAGTTCTGCCCTTTT+TGG | - | chr1_3:68571088-68571107 | Msa0136560:intron | 45.0% |
| !! | TAGTTCTGCCCTTTTTGGAG+AGG | - | chr1_3:68571093-68571112 | Msa0136560:intron | 45.0% |
| AAGGTGGTCCTCTCCAAAAA+GGG | + | chr1_3:68571104-68571123 | None:intergenic | 45.0% | |
| AAAGGTGGTCCTCTCCAAAA+AGG | + | chr1_3:68571105-68571124 | None:intergenic | 45.0% | |
| TTCAGAACCTCAACAGGACA+CGG | + | chr1_3:68571349-68571368 | None:intergenic | 45.0% | |
| CCTACAATGATGCATTTCCG+GGG | + | chr1_3:68571438-68571457 | None:intergenic | 45.0% | |
| GCCTACAATGATGCATTTCC+GGG | + | chr1_3:68571439-68571458 | None:intergenic | 45.0% | |
| GGCCTACAATGATGCATTTC+CGG | + | chr1_3:68571440-68571459 | None:intergenic | 45.0% | |
| TCTGATCTGAGTCCGAAGCA+AGG | - | chr1_3:68567171-68567190 | Msa0136560:three_prime_UTR | 50.0% | |
| GAGCGTCCTTTCGAAACTGT+TGG | + | chr1_3:68567337-68567356 | None:intergenic | 50.0% | |
| AAGAGTGGAATTGGGTCGAG+AGG | + | chr1_3:68567383-68567402 | None:intergenic | 50.0% | |
| CCATGCTCTCTCCATCACAA+TGG | + | chr1_3:68567739-68567758 | None:intergenic | 50.0% | |
| ! | CCATTGTGATGGAGAGAGCA+TGG | - | chr1_3:68567736-68567755 | Msa0136560:intron | 50.0% |
| ! | TGTGATGGAGAGAGCATGGT+AGG | - | chr1_3:68567740-68567759 | Msa0136560:intron | 50.0% |
| ! | TGGAGAGAGCATGGTAGGTA+TGG | - | chr1_3:68567745-68567764 | Msa0136560:intron | 50.0% |
| AGTTGCGCACAAAGGTTACC+CGG | + | chr1_3:68567927-68567946 | None:intergenic | 50.0% | |
| ! | TTAAGACTAGTCCCTCGAGC+CGG | - | chr1_3:68567948-68567967 | Msa0136560:intron | 50.0% |
| GTGACAAAGTTCTCCCCCAA+GGG | - | chr1_3:68567986-68568005 | Msa0136560:intron | 50.0% | |
| TTAACACAGCTGCATGCCCA+TGG | - | chr1_3:68568011-68568030 | Msa0136560:intron | 50.0% | |
| CTGGGTTTGAATCCAGCCAT+GGG | + | chr1_3:68568030-68568049 | None:intergenic | 50.0% | |
| CCCTTACCATCTCATCCATG+TGG | - | chr1_3:68568075-68568094 | Msa0136560:intron | 50.0% | |
| TGAATGGTGTGTGTGTGTGG+TGG | - | chr1_3:68568213-68568232 | Msa0136560:intron | 50.0% | |
| TGGTGTGCTTCGTATGGTAC+GGG | - | chr1_3:68568237-68568256 | Msa0136560:intron | 50.0% | |
| TCTCATGCCCCAATGGTGTA+GGG | - | chr1_3:68568274-68568293 | Msa0136560:intron | 50.0% | |
| GTTTATGGCCATGCGTTTGG+TGG | + | chr1_3:68568787-68568806 | None:intergenic | 50.0% | |
| ACACAACCAAAGGGGTGACT+GGG | + | chr1_3:68568835-68568854 | None:intergenic | 50.0% | |
| TACACAACCAAAGGGGTGAC+TGG | + | chr1_3:68568836-68568855 | None:intergenic | 50.0% | |
| ! | GGTCAGTGACGTTTGTTGAG+GGG | - | chr1_3:68569026-68569045 | Msa0136560:intron | 50.0% |
| ! | GTCAGTGACGTTTGTTGAGG+GGG | - | chr1_3:68569027-68569046 | Msa0136560:intron | 50.0% |
| TGGAGGAAACACGGATAGAG+GGG | - | chr1_3:68569200-68569219 | Msa0136560:intron | 50.0% | |
| !! | ATCGCGTGCCCATTGATTCT+TGG | + | chr1_3:68569502-68569521 | None:intergenic | 50.0% |
| !! | CTCATGCATTTTGGCGGCAA+TGG | - | chr1_3:68569595-68569614 | Msa0136560:intron | 50.0% |
| ATGTTAGCAGATGCCCCTAG+GGG | + | chr1_3:68569892-68569911 | None:intergenic | 50.0% | |
| ! | TCTCCTCTATTGGTGGCTCA+TGG | - | chr1_3:68570612-68570631 | Msa0136560:intron | 50.0% |
| GTTTGACGAACGCAATACCC+CGG | - | chr1_3:68571418-68571437 | Msa0136560:CDS | 50.0% | |
| CCCCGGAAATGCATCATTGT+AGG | - | chr1_3:68571435-68571454 | Msa0136560:CDS | 50.0% | |
| CTGAGTCCGAAGCAAGGTAC+CGG | - | chr1_3:68567177-68567196 | Msa0136560:three_prime_UTR | 55.0% | |
| GGGTCGAGAGGAAGATGAAG+AGG | + | chr1_3:68567371-68567390 | None:intergenic | 55.0% | |
| GCGGAGGTAAGGAAGAAGAG+TGG | + | chr1_3:68567398-68567417 | None:intergenic | 55.0% | |
| ! | TAAGACTAGTCCCTCGAGCC+GGG | - | chr1_3:68567949-68567968 | Msa0136560:intron | 55.0% |
| GGGAGAACTTTGTCACCCGT+TGG | + | chr1_3:68567982-68568001 | None:intergenic | 55.0% | |
| GGTGACAAAGTTCTCCCCCA+AGG | - | chr1_3:68567985-68568004 | Msa0136560:intron | 55.0% | |
| CCTGGGTTTGAATCCAGCCA+TGG | + | chr1_3:68568031-68568050 | None:intergenic | 55.0% | |
| CCATGGCTGGATTCAAACCC+AGG | - | chr1_3:68568028-68568047 | Msa0136560:intron | 55.0% | |
| CCAGTTTAACCAGGGGTCCT+GGG | + | chr1_3:68568048-68568067 | None:intergenic | 55.0% | |
| TCCAGTTTAACCAGGGGTCC+TGG | + | chr1_3:68568049-68568068 | None:intergenic | 55.0% | |
| ! | TGGTGTGTGTGTGTGGTGGA+TGG | - | chr1_3:68568217-68568236 | Msa0136560:intron | 55.0% |
| GGTGGATGGTGTGCTTCGTA+TGG | - | chr1_3:68568231-68568250 | Msa0136560:intron | 55.0% | |
| GTCTCATGCCCCAATGGTGT+AGG | - | chr1_3:68568273-68568292 | Msa0136560:intron | 55.0% | |
| TACTCACCCAGTCACCCCTT+TGG | - | chr1_3:68568826-68568845 | Msa0136560:CDS | 55.0% | |
| AACCTCAACAGGACACGGAC+TGG | + | chr1_3:68571344-68571363 | None:intergenic | 55.0% | |
| !! | TCCGAAGCAAGGTACCGGAG+AGG | - | chr1_3:68567182-68567201 | Msa0136560:three_prime_UTR | 60.0% |
| CCCTCTCCGGTACCTTGCTT+CGG | + | chr1_3:68567186-68567205 | None:intergenic | 60.0% | |
| !! | CCGAAGCAAGGTACCGGAGA+GGG | - | chr1_3:68567183-68567202 | Msa0136560:three_prime_UTR | 60.0% |
| !! | CGAAGCAAGGTACCGGAGAG+GGG | - | chr1_3:68567184-68567203 | Msa0136560:three_prime_UTR | 60.0% |
| ACCGGAGAGGGGAGAGAGAA+AGG | - | chr1_3:68567195-68567214 | Msa0136560:three_prime_UTR | 60.0% | |
| CCCTTTCTCTCTCCCCTCTC+CGG | + | chr1_3:68567199-68567218 | None:intergenic | 60.0% | |
| CCGGAGAGGGGAGAGAGAAA+GGG | - | chr1_3:68567196-68567215 | Msa0136560:three_prime_UTR | 60.0% | |
| TCACCCGTTGGAGTCCTACC+CGG | + | chr1_3:68567970-68567989 | None:intergenic | 60.0% | |
| GGATTCAAACCCAGGACCCC+TGG | - | chr1_3:68568036-68568055 | Msa0136560:intron | 60.0% | |
| CCCAGGACCCCTGGTTAAAC+TGG | - | chr1_3:68568045-68568064 | Msa0136560:intron | 60.0% | |
| CGAGACAGCAGACACACCCA+AGG | + | chr1_3:68570781-68570800 | None:intergenic | 60.0% | |
| GACCAGTCCGTGTCCTGTTG+AGG | - | chr1_3:68571339-68571358 | Msa0136560:intron | 60.0% | |
| ACTAGTCCCTCGAGCCGGGT+AGG | - | chr1_3:68567953-68567972 | Msa0136560:intron | 65.0% | |
| ! | TGGAGTCCTACCCGGCTCGA+GGG | + | chr1_3:68567962-68567981 | None:intergenic | 65.0% |
| ! | TTGGAGTCCTACCCGGCTCG+AGG | + | chr1_3:68567963-68567982 | None:intergenic | 65.0% |
| CGAGCCGGGTAGGACTCCAA+CGG | - | chr1_3:68567963-68567982 | Msa0136560:intron | 65.0% | |
| GAGCCGGGTAGGACTCCAAC+GGG | - | chr1_3:68567964-68567983 | Msa0136560:intron | 65.0% | |
| CACAGCTGCATGCCCATGGC+TGG | - | chr1_3:68568015-68568034 | Msa0136560:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 68567129 | 68571674 | 68567129 | ID=Msa0136560;Name=Msa0136560 |
| chr1_3 | mRNA | 68567129 | 68571674 | 68567129 | ID=Msa0136560-mRNA-1;Parent=Msa0136560;Name=Msa0136560-mRNA-1;_AED=0.13;_eAED=0.13;_QI=199|1|1|1|0.44|0.6|10|356|256 |
| chr1_3 | exon | 68567129 | 68567549 | 68567129 | ID=Msa0136560-mRNA-1:exon:23660;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68567636 | 68567707 | 68567636 | ID=Msa0136560-mRNA-1:exon:23659;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68568086 | 68568208 | 68568086 | ID=Msa0136560-mRNA-1:exon:23658;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68568305 | 68568363 | 68568305 | ID=Msa0136560-mRNA-1:exon:23657;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68568593 | 68568661 | 68568593 | ID=Msa0136560-mRNA-1:exon:23656;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68568762 | 68568857 | 68568762 | ID=Msa0136560-mRNA-1:exon:23655;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68569217 | 68569307 | 68569217 | ID=Msa0136560-mRNA-1:exon:23654;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68569844 | 68569869 | 68569844 | ID=Msa0136560-mRNA-1:exon:23653;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68570141 | 68570208 | 68570141 | ID=Msa0136560-mRNA-1:exon:23652;Parent=Msa0136560-mRNA-1 |
| chr1_3 | exon | 68571374 | 68571674 | 68571374 | ID=Msa0136560-mRNA-1:exon:23651;Parent=Msa0136560-mRNA-1 |
| chr1_3 | five_prime_UTR | 68571476 | 68571674 | 68571476 | ID=Msa0136560-mRNA-1:five_prime_utr;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68571374 | 68571475 | 68571374 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68570141 | 68570208 | 68570141 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68569844 | 68569869 | 68569844 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68569217 | 68569307 | 68569217 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68568762 | 68568857 | 68568762 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68568593 | 68568661 | 68568593 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68568305 | 68568363 | 68568305 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68568086 | 68568208 | 68568086 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68567636 | 68567707 | 68567636 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | CDS | 68567485 | 68567549 | 68567485 | ID=Msa0136560-mRNA-1:cds;Parent=Msa0136560-mRNA-1 |
| chr1_3 | three_prime_UTR | 68567129 | 68567484 | 68567129 | ID=Msa0136560-mRNA-1:three_prime_utr;Parent=Msa0136560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
