Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321790 | XP_003627978.1 | 99.138 | 116 | 1 | 0 | 4 | 119 | 28 | 143 | 5.71e-81 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321790 | sp|Q9SGA6|RS191_ARATH | 82.759 | 116 | 20 | 0 | 4 | 119 | 28 | 143 | 1.63e-72 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321790 | B7FHE5 | 99.138 | 116 | 1 | 0 | 4 | 119 | 28 | 143 | 2.73e-81 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1321790 | 0.843978 | 1.004378e-58 | -8.615850e-47 |
| Msa0002790 | Msa1321790 | 0.832065 | 1.168971e-55 | -8.615850e-47 |
| Msa0049690 | Msa1321790 | 0.854039 | 1.604806e-61 | -8.615850e-47 |
| Msa0076040 | Msa1321790 | 0.805609 | 1.229138e-49 | -8.615850e-47 |
| Msa0082280 | Msa1321790 | 0.817733 | 2.829932e-52 | -8.615850e-47 |
| Msa0097580 | Msa1321790 | 0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa0604960 | Msa1321790 | 0.829680 | 4.495702e-55 | -8.615850e-47 |
| Msa0622750 | Msa1321790 | 0.814134 | 1.797941e-51 | -8.615850e-47 |
| Msa0625570 | Msa1321790 | 0.842267 | 2.870462e-58 | -8.615850e-47 |
| Msa0643980 | Msa1321790 | 0.823493 | 1.344390e-53 | -8.615850e-47 |
| Msa0685460 | Msa1321790 | 0.822837 | 1.912780e-53 | -8.615850e-47 |
| Msa0705800 | Msa1321790 | 0.807597 | 4.677814e-50 | -8.615850e-47 |
| Msa0712610 | Msa1321790 | 0.865738 | 4.749038e-65 | -8.615850e-47 |
| Msa0729200 | Msa1321790 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa0752910 | Msa1321790 | 0.808461 | 3.062980e-50 | -8.615850e-47 |
| Msa0769590 | Msa1321790 | 0.807047 | 6.115608e-50 | -8.615850e-47 |
| Msa0781080 | Msa1321790 | 0.813317 | 2.721170e-51 | -8.615850e-47 |
| Msa0785130 | Msa1321790 | 0.821056 | 4.944474e-53 | -8.615850e-47 |
| Msa0792420 | Msa1321790 | 0.976069 | 3.987778e-141 | -8.615850e-47 |
| Msa0817540 | Msa1321790 | 0.822078 | 2.871571e-53 | -8.615850e-47 |
| Msa0142330 | Msa1321790 | 0.813054 | 3.108330e-51 | -8.615850e-47 |
| Msa0174770 | Msa1321790 | 0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa0181610 | Msa1321790 | 0.816259 | 6.064607e-52 | -8.615850e-47 |
| Msa0210330 | Msa1321790 | 0.827530 | 1.487260e-54 | -8.615850e-47 |
| Msa0210360 | Msa1321790 | 0.804817 | 1.800603e-49 | -8.615850e-47 |
| Msa0219120 | Msa1321790 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
| Msa0221030 | Msa1321790 | 0.819942 | 8.911364e-53 | -8.615850e-47 |
| Msa0224560 | Msa1321790 | 0.850439 | 1.696414e-60 | -8.615850e-47 |
| Msa1256840 | Msa1321790 | 0.867334 | 1.477670e-65 | -8.615850e-47 |
| Msa1266060 | Msa1321790 | 0.819005 | 1.457620e-52 | -8.615850e-47 |
| Msa1311400 | Msa1321790 | 0.826024 | 3.404203e-54 | -8.615850e-47 |
| Msa1321790 | Msa1332250 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa1321790 | Msa1338190 | 0.876870 | 9.894774e-69 | -8.615850e-47 |
| Msa1321790 | Msa1343260 | 0.833312 | 5.732593e-56 | -8.615850e-47 |
| Msa1321790 | Msa1349570 | 0.814813 | 1.272399e-51 | -8.615850e-47 |
| Msa1321790 | Msa1356790 | 0.871247 | 7.903548e-67 | -8.615850e-47 |
| Msa1321790 | Msa1362210 | 0.807023 | 6.187333e-50 | -8.615850e-47 |
| Msa1321790 | Msa1362790 | 0.872346 | 3.411765e-67 | -8.615850e-47 |
| Msa1321790 | Msa1368920 | 0.817516 | 3.166793e-52 | -8.615850e-47 |
| Msa1321790 | Msa1369190 | 0.822088 | 2.856170e-53 | -8.615850e-47 |
| Msa1321790 | Msa1370860 | 0.816150 | 6.415685e-52 | -8.615850e-47 |
| Msa1321790 | Msa1374240 | 0.812726 | 3.666641e-51 | -8.615850e-47 |
| Msa1321790 | Msa1397100 | 0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa1321790 | Msa1410440 | 0.816798 | 4.592217e-52 | -8.615850e-47 |
| Msa1321790 | Msa1413260 | 0.841017 | 6.129533e-58 | -8.615850e-47 |
| Msa1321790 | Msa1418770 | 0.811445 | 6.974913e-51 | -8.615850e-47 |
| Msa1321790 | Msa1425670 | 0.832603 | 8.602918e-56 | -8.615850e-47 |
| Msa1321790 | Msa1426120 | 0.832976 | 6.951223e-56 | -8.615850e-47 |
| Msa1321790 | Msa1426490 | 0.837051 | 6.527229e-57 | -8.615850e-47 |
| Msa1321790 | Msa1437280 | 0.856500 | 3.085081e-62 | -8.615850e-47 |
| Msa1321790 | Msa1450280 | 0.811931 | 5.469193e-51 | -8.615850e-47 |
| Msa1321790 | Msa1456050 | 0.864407 | 1.243473e-64 | -8.615850e-47 |
| Msa1321790 | Msa1462860 | 0.811410 | 7.099005e-51 | -8.615850e-47 |
| Msa0432210 | Msa1321790 | 0.810462 | 1.139091e-50 | -8.615850e-47 |
| Msa0481850 | Msa1321790 | 0.845033 | 5.227259e-59 | -8.615850e-47 |
| Msa1019260 | Msa1321790 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa1037290 | Msa1321790 | 0.820247 | 7.588679e-53 | -8.615850e-47 |
| Msa1042780 | Msa1321790 | 0.802065 | 6.694099e-49 | -8.615850e-47 |
| Msa1078870 | Msa1321790 | 0.836795 | 7.591487e-57 | -8.615850e-47 |
| Msa1080350 | Msa1321790 | 0.849366 | 3.385543e-60 | -8.615850e-47 |
| Msa1085470 | Msa1321790 | 0.809727 | 1.640000e-50 | -8.615850e-47 |
| Msa1088490 | Msa1321790 | 0.816806 | 4.574326e-52 | -8.615850e-47 |
| Msa0250820 | Msa1321790 | 0.807773 | 4.290761e-50 | -8.615850e-47 |
| Msa0257450 | Msa1321790 | 0.850977 | 1.197416e-60 | -8.615850e-47 |
| Msa0258850 | Msa1321790 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
| Msa0296720 | Msa1321790 | 0.813224 | 2.852470e-51 | -8.615850e-47 |
| Msa0298200 | Msa1321790 | 0.817185 | 3.759929e-52 | -8.615850e-47 |
| Msa0327330 | Msa1321790 | 0.800090 | 1.696336e-48 | -8.615850e-47 |
| Msa0335840 | Msa1321790 | 0.810922 | 9.060643e-51 | -8.615850e-47 |
| Msa0336010 | Msa1321790 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0337670 | Msa1321790 | 0.820694 | 5.991924e-53 | -8.615850e-47 |
| Msa0348830 | Msa1321790 | 0.825915 | 3.612000e-54 | -8.615850e-47 |
| Msa1125580 | Msa1321790 | 0.817764 | 2.784013e-52 | -8.615850e-47 |
| Msa1125860 | Msa1321790 | 0.847637 | 1.019408e-59 | -8.615850e-47 |
| Msa1126060 | Msa1321790 | 0.838468 | 2.824317e-57 | -8.615850e-47 |
| Msa1126510 | Msa1321790 | 0.815607 | 8.478627e-52 | -8.615850e-47 |
| Msa1126520 | Msa1321790 | 0.808163 | 3.544174e-50 | -8.615850e-47 |
| Msa1164150 | Msa1321790 | 0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa1166860 | Msa1321790 | 0.820757 | 5.795322e-53 | -8.615850e-47 |
| Msa1167540 | Msa1321790 | 0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa1215820 | Msa1321790 | 0.839483 | 1.542358e-57 | -8.615850e-47 |
| Msa0521050 | Msa1321790 | 0.829171 | 5.977140e-55 | -8.615850e-47 |
| Msa0573350 | Msa1321790 | 0.828084 | 1.094161e-54 | -8.615850e-47 |
| Msa0584030 | Msa1321790 | 0.821778 | 3.369255e-53 | -8.615850e-47 |
| Msa0590940 | Msa1321790 | 0.845952 | 2.945609e-59 | -8.615850e-47 |
| Msa0867060 | Msa1321790 | 0.816988 | 4.162305e-52 | -8.615850e-47 |
| Msa0888810 | Msa1321790 | 0.831798 | 1.360629e-55 | -8.615850e-47 |
| Msa0915540 | Msa1321790 | 0.824223 | 9.069658e-54 | -8.615850e-47 |
| Msa0945480 | Msa1321790 | 0.827264 | 1.721921e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321790 | MtrunA17_Chr8g0353881 | 99.138 | 116 | 1 | 0 | 4 | 119 | 28 | 143 | 5.25e-85 | 244 |
| Msa1321790 | MtrunA17_Chr3g0081741 | 91.379 | 116 | 10 | 0 | 4 | 119 | 28 | 143 | 6.17e-81 | 233 |
| Msa1321790 | MtrunA17_Chr3g0081771 | 77.381 | 84 | 17 | 1 | 36 | 119 | 10 | 91 | 2.04e-42 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321790 | AT3G02080.1 | 82.759 | 116 | 20 | 0 | 4 | 119 | 28 | 143 | 1.66e-73 | 215 |
| Msa1321790 | AT5G61170.1 | 80.870 | 115 | 22 | 0 | 4 | 118 | 28 | 142 | 1.64e-71 | 210 |
| Msa1321790 | AT5G15520.1 | 83.036 | 112 | 19 | 0 | 4 | 115 | 28 | 139 | 9.49e-71 | 208 |
Find 44 sgRNAs with CRISPR-Local
Find 524 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCATTCCAAAGGATTTA+TGG | 0.171916 | 8_4:-27982156 | Msa1321790:CDS |
| GCCATATTATGCCTAAATTA+TGG | 0.229792 | 8_4:-27981081 | Msa1321790:three_prime_UTR |
| GGTAGCTAAAACCATAATTT+AGG | 0.245466 | 8_4:+27981070 | None:intergenic |
| TGTCAAATTTAAAAGATATT+AGG | 0.258856 | 8_4:+27981049 | None:intergenic |
| ACCATAATTTAGGCATAATA+TGG | 0.297273 | 8_4:+27981080 | None:intergenic |
| AACTGCAAAATTCAAAGAAT+TGG | 0.319374 | 8_4:-27982381 | Msa1321790:CDS |
| TGATCCGAAAACGTGTAATT+AGG | 0.326862 | 8_4:+27980893 | None:intergenic |
| ATAATACCAATCAGGATCAT+AGG | 0.347366 | 8_4:+27982355 | None:intergenic |
| GGCTCCCACCATAAATCCTT+TGG | 0.389483 | 8_4:+27982148 | None:intergenic |
| GTCGAGATCCCGCCGGCCAC+TGG | 0.400454 | 8_4:+27981185 | None:intergenic |
| ATCTACATAAGAGGCGGTCT+TGG | 0.403127 | 8_4:-27982183 | Msa1321790:CDS |
| GTACTCAATTTCAGCTTCCA+TGG | 0.471471 | 8_4:-27982214 | Msa1321790:intron |
| TGGCTCCCTATGATCCTGAT+TGG | 0.474063 | 8_4:-27982361 | Msa1321790:CDS |
| CGGGATCTCGACCAAGTGGC+TGG | 0.481272 | 8_4:-27981174 | Msa1321790:CDS |
| GCTCTAACATAATACCAATC+AGG | 0.489642 | 8_4:+27982347 | None:intergenic |
| TTGGTGTTGGTTCATTCCAA+AGG | 0.500013 | 8_4:-27982164 | Msa1321790:CDS |
| CTAGAATCCGTCCAGCCACT+TGG | 0.508085 | 8_4:+27981163 | None:intergenic |
| TATGTAGATCTTCCTTGCCA+TGG | 0.510578 | 8_4:+27982197 | None:intergenic |
| GAGGGCGACTTCCATTCCTC+TGG | 0.516528 | 8_4:+27982127 | None:intergenic |
| ATAAGAGGCGGTCTTGGTGT+TGG | 0.519137 | 8_4:-27982177 | Msa1321790:CDS |
| AGATTGTTCAATCTTCACTC+TGG | 0.534772 | 8_4:-27980962 | Msa1321790:three_prime_UTR |
| TAATACCAATCAGGATCATA+GGG | 0.537599 | 8_4:+27982356 | None:intergenic |
| CAATTTCAGCTTCCATGGCA+AGG | 0.544710 | 8_4:-27982209 | Msa1321790:intron |
| GCAAGGAAGATCTACATAAG+AGG | 0.545628 | 8_4:-27982192 | Msa1321790:CDS |
| AATTACATCCAGTGGCCGGC+GGG | 0.546453 | 8_4:-27981193 | Msa1321790:CDS |
| AGGCAAAGAAATAATGTCAA+AGG | 0.556549 | 8_4:+27980913 | None:intergenic |
| TCGTCACATTCTTCAACAGT+TGG | 0.571334 | 8_4:-27982073 | Msa1321790:CDS |
| CATTCCAAAGGATTTATGGT+GGG | 0.572274 | 8_4:-27982152 | Msa1321790:CDS |
| GGATTTATGGTGGGAGCCAG+AGG | 0.572742 | 8_4:-27982143 | Msa1321790:CDS |
| GATTGGTATTATGTTAGAGC+TGG | 0.573765 | 8_4:-27982344 | Msa1321790:intron |
| ATCTCGACCAAGTGGCTGGA+CGG | 0.574019 | 8_4:-27981170 | Msa1321790:CDS |
| GAACATGAACCTCATCGAGA+TGG | 0.583253 | 8_4:-27982049 | Msa1321790:CDS |
| TCATCGAGATGGATACCAAA+GGG | 0.584221 | 8_4:-27982038 | Msa1321790:intron |
| GGAAAATTACATCCAGTGGC+CGG | 0.588367 | 8_4:-27981197 | Msa1321790:CDS |
| GGCAGGAAAATTACATCCAG+TGG | 0.598688 | 8_4:-27981201 | Msa1321790:CDS |
| TATGGTGGGAGCCAGAGGAA+TGG | 0.616028 | 8_4:-27982138 | Msa1321790:CDS |
| TCATTCCAAAGGATTTATGG+TGG | 0.619819 | 8_4:-27982153 | Msa1321790:CDS |
| TTGACAAGATCAGTCCACTC+AGG | 0.623178 | 8_4:+27982404 | None:intergenic |
| AATAGTTGGAGCTGCCTGAG+TGG | 0.627148 | 8_4:-27982418 | Msa1321790:intron |
| AAATTACATCCAGTGGCCGG+CGG | 0.648983 | 8_4:-27981194 | Msa1321790:CDS |
| CTCATCGAGATGGATACCAA+AGG | 0.653842 | 8_4:-27982039 | Msa1321790:CDS |
| CTTTGGTATCCATCTCGATG+AGG | 0.659041 | 8_4:+27982040 | None:intergenic |
| AGGAAGATCTACATAAGAGG+CGG | 0.678529 | 8_4:-27982189 | Msa1321790:CDS |
| CCACTTGGTCGAGATCCCGC+CGG | 0.692829 | 8_4:+27981178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTTTAATTTCTAATTTTT+AGG | - | chr8_4:27981306-27981325 | Msa1321790:intron | 10.0% |
| !! | AATTTATTTAAAGAATCAAT+TGG | - | chr8_4:27981845-27981864 | Msa1321790:intron | 10.0% |
| !! | TTCAATAAATGAATTTAAAT+GGG | + | chr8_4:27982320-27982339 | None:intergenic | 10.0% |
| !! | ATTCAATAAATGAATTTAAA+TGG | + | chr8_4:27982321-27982340 | None:intergenic | 10.0% |
| !! | TAAAATATCATATATATTAG+AGG | - | chr8_4:27983475-27983494 | Msa1321790:intron | 10.0% |
| !! | AAATTGACATAATAAATTAT+AGG | - | chr8_4:27985008-27985027 | Msa1321790:intron | 10.0% |
| !!! | GAATTTATAAATTTTCTAAT+GGG | + | chr8_4:27985072-27985091 | None:intergenic | 10.0% |
| !!! | TGAATTTATAAATTTTCTAA+TGG | + | chr8_4:27985073-27985092 | None:intergenic | 10.0% |
| !!! | AAATATTTAATTAGTTGATA+TGG | - | chr8_4:27986223-27986242 | Msa1321790:intron | 10.0% |
| !!! | CTAAATAATTTGTTATTTTT+AGG | - | chr8_4:27986821-27986840 | Msa1321790:intron | 10.0% |
| !! | ATAAAATGTAAAATTGAAAA+GGG | - | chr8_4:27987177-27987196 | Msa1321790:intron | 10.0% |
| !! | TAATAACTTATGATTAATAT+GGG | + | chr8_4:27987532-27987551 | None:intergenic | 10.0% |
| !!! | AATCGATATTTTTTTTTTTT+TGG | + | chr8_4:27987559-27987578 | None:intergenic | 10.0% |
| !!! | ATTAATCAGTTTTTAATTAT+AGG | - | chr8_4:27988068-27988087 | Msa1321790:intron | 10.0% |
| !!! | TATTTTTTAAAAATACTGTT+TGG | - | chr8_4:27990535-27990554 | Msa1321790:intron | 10.0% |
| !! | AAAAATATCCGAAATAATTT+GGG | + | chr8_4:27981217-27981236 | None:intergenic | 15.0% |
| !! | AAAAAATATCCGAAATAATT+TGG | + | chr8_4:27981218-27981237 | None:intergenic | 15.0% |
| !! | TCATTGAGAATTATAATATA+AGG | - | chr8_4:27981428-27981447 | Msa1321790:intron | 15.0% |
| !!! | TGATTATGTTTTATACATTT+GGG | - | chr8_4:27981532-27981551 | Msa1321790:intron | 15.0% |
| !!! | TAAAGTTTATTTTGAAAAGT+AGG | - | chr8_4:27981617-27981636 | Msa1321790:intron | 15.0% |
| !!! | TTTTGAGATTCATTATAAAA+AGG | + | chr8_4:27981681-27981700 | None:intergenic | 15.0% |
| !!! | TAAAGTATATTTCCTTATTT+AGG | - | chr8_4:27981795-27981814 | Msa1321790:intron | 15.0% |
| !!! | CTCTTAAAATTCTAATTTTT+AGG | - | chr8_4:27983298-27983317 | Msa1321790:intron | 15.0% |
| !! | AAAGATATATCAATTTAGAA+TGG | - | chr8_4:27983917-27983936 | Msa1321790:intron | 15.0% |
| !! | TTTGTATTTAAAAGACAATT+TGG | - | chr8_4:27984011-27984030 | Msa1321790:intron | 15.0% |
| !!! | TAAATTGTTAAATTTTCTTG+AGG | - | chr8_4:27984239-27984258 | Msa1321790:intron | 15.0% |
| !!! | AGTTACTATTATAGTATTTT+TGG | - | chr8_4:27984338-27984357 | Msa1321790:intron | 15.0% |
| !!! | ATTTGATAACAAAGTTTATA+AGG | - | chr8_4:27985454-27985473 | Msa1321790:intron | 15.0% |
| !! | ATCAAGAATATTAAAGATTA+GGG | + | chr8_4:27986556-27986575 | None:intergenic | 15.0% |
| !! | TATCAAGAATATTAAAGATT+AGG | + | chr8_4:27986557-27986576 | None:intergenic | 15.0% |
| !! | GATAAAATGTAAAATTGAAA+AGG | - | chr8_4:27987176-27987195 | Msa1321790:intron | 15.0% |
| !! | TAAAATGTAAAATTGAAAAG+GGG | - | chr8_4:27987178-27987197 | Msa1321790:intron | 15.0% |
| !! | AAATGATTAAAAAATCATAG+TGG | - | chr8_4:27987350-27987369 | Msa1321790:intron | 15.0% |
| !! | GTAATAACTTATGATTAATA+TGG | + | chr8_4:27987533-27987552 | None:intergenic | 15.0% |
| !!! | TTTTATATTAACCCTTTTTT+TGG | - | chr8_4:27987857-27987876 | Msa1321790:intron | 15.0% |
| !! | AACTTAAAAAACCAAAAAAA+GGG | + | chr8_4:27987871-27987890 | None:intergenic | 15.0% |
| !! | ATTAATTAATCAATTAGTGT+TGG | - | chr8_4:27987986-27988005 | Msa1321790:intron | 15.0% |
| !!! | AATTAATCAACTAGTTTTAT+AGG | - | chr8_4:27988216-27988235 | Msa1321790:intron | 15.0% |
| !!! | TAAGTTTTATGATACTTTTT+TGG | - | chr8_4:27988284-27988303 | Msa1321790:intron | 15.0% |
| !! | ATATAAGTTGTATATCTAAA+AGG | - | chr8_4:27988498-27988517 | Msa1321790:intron | 15.0% |
| !!! | TGTTTCAAATTTTTTTCATA+GGG | + | chr8_4:27988621-27988640 | None:intergenic | 15.0% |
| !!! | TTGTTTCAAATTTTTTTCAT+AGG | + | chr8_4:27988622-27988641 | None:intergenic | 15.0% |
| !! | TCAAAAATAAATATTACTAG+GGG | + | chr8_4:27989071-27989090 | None:intergenic | 15.0% |
| !! | CTCAAAAATAAATATTACTA+GGG | + | chr8_4:27989072-27989091 | None:intergenic | 15.0% |
| !!! | CTAGTAATATTTATTTTTGA+GGG | - | chr8_4:27989071-27989090 | Msa1321790:intron | 15.0% |
| !! | TATAAATGATATATCTTCAA+AGG | + | chr8_4:27990277-27990296 | None:intergenic | 15.0% |
| !!! | AAATTATTGATTCTAATCAT+AGG | - | chr8_4:27990882-27990901 | Msa1321790:intron | 15.0% |
| !! | TGTCAAATTTAAAAGATATT+AGG | + | chr8_4:27991148-27991167 | None:intergenic | 15.0% |
| !! | TATTCCCAAATAACAAAATA+GGG | + | chr8_4:27980908-27980927 | None:intergenic | 20.0% |
| !! | ATATTCCCAAATAACAAAAT+AGG | + | chr8_4:27980909-27980928 | None:intergenic | 20.0% |
| !!! | CTGTTTCATTGTTTTTATTT+TGG | - | chr8_4:27981117-27981136 | Msa1321790:three_prime_UTR | 20.0% |
| !!! | GTTTAAATCAATTTTGAATC+TGG | - | chr8_4:27981180-27981199 | Msa1321790:CDS | 20.0% |
| !! | AGAAAAATCCCAAATTATTT+CGG | - | chr8_4:27981206-27981225 | Msa1321790:intron | 20.0% |
| !!! | ATCGGCATTAAAATATTTTA+CGG | + | chr8_4:27981246-27981265 | None:intergenic | 20.0% |
| !!! | CTGATTATGTTTTATACATT+TGG | - | chr8_4:27981531-27981550 | Msa1321790:intron | 20.0% |
| !!! | GAACAATTTTTTTGTACATA+AGG | - | chr8_4:27981707-27981726 | Msa1321790:intron | 20.0% |
| !! | ACTCAATTATTTCCTAAATA+AGG | + | chr8_4:27981810-27981829 | None:intergenic | 20.0% |
| !! | TAAATGAATTTAAATGGGAA+TGG | + | chr8_4:27982315-27982334 | None:intergenic | 20.0% |
| !!! | ATTGAATTGTCTAGTAATTT+TGG | - | chr8_4:27982334-27982353 | Msa1321790:intron | 20.0% |
| !! | TAAATATGCGGTAATTATTA+AGG | - | chr8_4:27982517-27982536 | Msa1321790:intron | 20.0% |
| !!! | TAATTCTTTAATTTTCCATG+TGG | - | chr8_4:27982791-27982810 | Msa1321790:intron | 20.0% |
| !!! | AATTCTTTAATTTTCCATGT+GGG | - | chr8_4:27982792-27982811 | Msa1321790:intron | 20.0% |
| !!! | GTTAATTAATTTTGACATGT+TGG | - | chr8_4:27982998-27983017 | Msa1321790:intron | 20.0% |
| !!! | TATTTCCTTTGTTTAAACTA+AGG | - | chr8_4:27983534-27983553 | Msa1321790:intron | 20.0% |
| !! | AGTATTCTATTAAGATTGTT+AGG | - | chr8_4:27983603-27983622 | Msa1321790:intron | 20.0% |
| !! | AAAAATACCTCAAAAGATAA+GGG | - | chr8_4:27983848-27983867 | Msa1321790:intron | 20.0% |
| !!! | TCAAAATTTCCTTAATTTGT+GGG | + | chr8_4:27984215-27984234 | None:intergenic | 20.0% |
| !! | TAATAGAACAAAATTGAATG+AGG | - | chr8_4:27984288-27984307 | Msa1321790:intron | 20.0% |
| !!! | AATTTTTTAACTTGATTGAG+AGG | + | chr8_4:27984390-27984409 | None:intergenic | 20.0% |
| !! | CTGAAAAGAGAAATTATATT+TGG | - | chr8_4:27984473-27984492 | Msa1321790:intron | 20.0% |
| !! | CAAATTTCTTAACTTATAAG+TGG | + | chr8_4:27984675-27984694 | None:intergenic | 20.0% |
| !! | AATTACTTAATGAGAATTTG+TGG | + | chr8_4:27984712-27984731 | None:intergenic | 20.0% |
| !!! | TTGGTTTTGAGATAATATTA+TGG | - | chr8_4:27984739-27984758 | Msa1321790:intron | 20.0% |
| !!! | TGATCTTATTTATATGCATT+TGG | - | chr8_4:27985139-27985158 | Msa1321790:intron | 20.0% |
| !! | ACATATATAATCAGATTGTT+CGG | - | chr8_4:27985167-27985186 | Msa1321790:intron | 20.0% |
| !! | TTCAACAACAATAATCTATA+TGG | + | chr8_4:27985487-27985506 | None:intergenic | 20.0% |
| !!! | TATGTTCTATACTTTTGTTT+TGG | - | chr8_4:27985632-27985651 | Msa1321790:intron | 20.0% |
| !! | TAACTATATCAGAATTCTTT+AGG | + | chr8_4:27986019-27986038 | None:intergenic | 20.0% |
| !! | TATATTCCAATATCATAATG+TGG | - | chr8_4:27986090-27986109 | Msa1321790:intron | 20.0% |
| !! | ATATTCCAATATCATAATGT+GGG | - | chr8_4:27986091-27986110 | Msa1321790:intron | 20.0% |
| !! | AGTGATCAAATTAAGTAATA+AGG | - | chr8_4:27986171-27986190 | Msa1321790:intron | 20.0% |
| !!! | ATATTAAAGATTAGGGTATT+AGG | + | chr8_4:27986549-27986568 | None:intergenic | 20.0% |
| !!! | ACAATATCGTGTTTTTTAAT+AGG | + | chr8_4:27986893-27986912 | None:intergenic | 20.0% |
| !!! | TAGTTTGGTTTAAGATTTTT+GGG | + | chr8_4:27986995-27987014 | None:intergenic | 20.0% |
| !! | TTCAAAATTAGAATGCTTAA+TGG | - | chr8_4:27987263-27987282 | Msa1321790:intron | 20.0% |
| !! | TCAAAATTAGAATGCTTAAT+GGG | - | chr8_4:27987264-27987283 | Msa1321790:intron | 20.0% |
| !! | CAAAACAAAGAAAAATTGAT+GGG | + | chr8_4:27987817-27987836 | None:intergenic | 20.0% |
| !! | ACAAAACAAAGAAAAATTGA+TGG | + | chr8_4:27987818-27987837 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTGTTTTGTGAAA+TGG | - | chr8_4:27987822-27987841 | Msa1321790:intron | 20.0% |
| !!! | TTTTCTTTGTTTTGTGAAAT+GGG | - | chr8_4:27987823-27987842 | Msa1321790:intron | 20.0% |
| !! | CAACTTAAAAAACCAAAAAA+AGG | + | chr8_4:27987872-27987891 | None:intergenic | 20.0% |
| !!! | TTGTTGTTTAAGATTTGTTA+TGG | - | chr8_4:27987944-27987963 | Msa1321790:intron | 20.0% |
| !! | AAATTATCAGTTGTTTATTG+CGG | - | chr8_4:27988557-27988576 | Msa1321790:intron | 20.0% |
| !!! | TTTCAAATTTTTTTCATAGG+GGG | + | chr8_4:27988619-27988638 | None:intergenic | 20.0% |
| !!! | GTTTCAAATTTTTTTCATAG+GGG | + | chr8_4:27988620-27988639 | None:intergenic | 20.0% |
| !!! | AAAATACAGACTGTTTTTTA+AGG | - | chr8_4:27988660-27988679 | Msa1321790:intron | 20.0% |
| !! | TTAAAAAATGTATGCAAGTA+GGG | - | chr8_4:27988776-27988795 | Msa1321790:intron | 20.0% |
| !! | CCTCAAAAATAAATATTACT+AGG | + | chr8_4:27989073-27989092 | None:intergenic | 20.0% |
| !!! | CCTAGTAATATTTATTTTTG+AGG | - | chr8_4:27989070-27989089 | Msa1321790:intron | 20.0% |
| !!! | GGTATTATTATTTAGTTTTC+TGG | - | chr8_4:27989099-27989118 | Msa1321790:intron | 20.0% |
| !! | TTTCAATAAAACTACATCTT+TGG | + | chr8_4:27989251-27989270 | None:intergenic | 20.0% |
| !!! | TTCTTTTGATTCTAAATAGT+TGG | - | chr8_4:27989762-27989781 | Msa1321790:intron | 20.0% |
| !!! | AGAGCTTATCTTTTTTTTTT+TGG | + | chr8_4:27990503-27990522 | None:intergenic | 20.0% |
| !!! | ATTATATAATCTAGCTTATG+CGG | - | chr8_4:27990591-27990610 | Msa1321790:intron | 20.0% |
| !!! | AATATATTTTTATATCCCAG+TGG | - | chr8_4:27990972-27990991 | Msa1321790:intron | 20.0% |
| !!! | GCTTAATGAAACTTTTTATT+TGG | - | chr8_4:27991078-27991097 | Msa1321790:intron | 20.0% |
| !!! | ATGAACCCTATTTTGTTATT+TGG | - | chr8_4:27980900-27980919 | Msa1321790:three_prime_UTR | 25.0% |
| !!! | TGAACCCTATTTTGTTATTT+GGG | - | chr8_4:27980901-27980920 | Msa1321790:three_prime_UTR | 25.0% |
| !! | TTTTCTTTACTATGCATGAT+TGG | - | chr8_4:27980998-27981017 | Msa1321790:three_prime_UTR | 25.0% |
| ! | AATGAAACAGTAGATATCAT+CGG | + | chr8_4:27981107-27981126 | None:intergenic | 25.0% |
| !!! | AGGATAAACATAGCTTTATA+AGG | - | chr8_4:27981448-27981467 | Msa1321790:intron | 25.0% |
| ! | CGTACTTATTTGTGATAATA+AGG | - | chr8_4:27981482-27981501 | Msa1321790:intron | 25.0% |
| ! | GTGATAATAAGGTTCATATT+TGG | - | chr8_4:27981493-27981512 | Msa1321790:intron | 25.0% |
| ! | TTGTACATAAGGTAAGAATT+TGG | - | chr8_4:27981718-27981737 | Msa1321790:intron | 25.0% |
| !!! | TGAATATTTTGGTGTACATA+AGG | - | chr8_4:27981890-27981909 | Msa1321790:intron | 25.0% |
| !! | CATAAGGTTCAATTTTCTTT+TGG | - | chr8_4:27981906-27981925 | Msa1321790:intron | 25.0% |
| ! | TTAAGTATTCATACACACAT+TGG | - | chr8_4:27982147-27982166 | Msa1321790:CDS | 25.0% |
| !!! | TCTAGTAATTTTGGTTGTTT+TGG | - | chr8_4:27982343-27982362 | Msa1321790:intron | 25.0% |
| ! | TAATTATTAAGGTTTCCATG+TGG | - | chr8_4:27982528-27982547 | Msa1321790:intron | 25.0% |
| ! | CTCAATGAAATGATCAAATA+TGG | + | chr8_4:27982662-27982681 | None:intergenic | 25.0% |
| !!! | GTCAAAAGATTGTGTTTTAA+CGG | - | chr8_4:27982709-27982728 | Msa1321790:intron | 25.0% |
| ! | AACTTGTGATGTTAAATATG+TGG | - | chr8_4:27982768-27982787 | Msa1321790:intron | 25.0% |
| !!! | GTCAAAAGATTGTGTTTTAA+TGG | - | chr8_4:27982709-27982728 | Msa1321790:intron | 25.0% |
| ! | ACAATAATATCAATTGCTAG+TGG | + | chr8_4:27983161-27983180 | None:intergenic | 25.0% |
| ! | AAGAACATTGATATTGTTCT+TGG | - | chr8_4:27983329-27983348 | Msa1321790:intron | 25.0% |
| ! | TCAAATTTGATTCTCACATT+AGG | + | chr8_4:27983408-27983427 | None:intergenic | 25.0% |
| ! | ACATTATAATTTCGACTATC+AGG | - | chr8_4:27983674-27983693 | Msa1321790:intron | 25.0% |
| !! | AGTTAGAAATGATCTTTTGA+AGG | - | chr8_4:27983759-27983778 | Msa1321790:intron | 25.0% |
| ! | GAAAAATACCTCAAAAGATA+AGG | - | chr8_4:27983847-27983866 | Msa1321790:intron | 25.0% |
| ! | GATATATCTTTCAACATCAT+TGG | + | chr8_4:27983908-27983927 | None:intergenic | 25.0% |
| !! | TAGTAACGACAATCTAAAAT+TGG | + | chr8_4:27983980-27983999 | None:intergenic | 25.0% |
| ! | GTGACATTCTATATTGTTTA+AGG | - | chr8_4:27984165-27984184 | Msa1321790:intron | 25.0% |
| !! | CTCAAAATTTCCTTAATTTG+TGG | + | chr8_4:27984216-27984235 | None:intergenic | 25.0% |
| ! | TTTAATCGAAAGACTCTATT+AGG | - | chr8_4:27984496-27984515 | Msa1321790:intron | 25.0% |
| ! | CTTATTATAGCTACATAAGA+TGG | - | chr8_4:27984539-27984558 | Msa1321790:intron | 25.0% |
| ! | GCAACATTAATGATACAATA+TGG | - | chr8_4:27984586-27984605 | Msa1321790:intron | 25.0% |
| ! | CATTAAGTAATTGTCTCATT+TGG | - | chr8_4:27984720-27984739 | Msa1321790:intron | 25.0% |
| ! | ATTGTTGAAAAGAAACCTTA+AGG | - | chr8_4:27985217-27985236 | Msa1321790:intron | 25.0% |
| ! | GTTCTCTTTAATAATCCTTA+AGG | + | chr8_4:27985235-27985254 | None:intergenic | 25.0% |
| ! | TCATATGATTGTTGTCATTA+AGG | - | chr8_4:27985577-27985596 | Msa1321790:intron | 25.0% |
| ! | GAAATAAACAACAACATTAG+CGG | + | chr8_4:27986427-27986446 | None:intergenic | 25.0% |
| ! | AATGATCTTGAAATAAACAG+AGG | + | chr8_4:27986463-27986482 | None:intergenic | 25.0% |
| ! | ACATTGAACATGATTATGAT+CGG | + | chr8_4:27986599-27986618 | None:intergenic | 25.0% |
| ! | CAACAATTATGAATCAATAG+CGG | + | chr8_4:27986633-27986652 | None:intergenic | 25.0% |
| ! | TAATATAATACAGAGACTGT+TGG | + | chr8_4:27986697-27986716 | None:intergenic | 25.0% |
| ! | AAAACTTATTCCAAGTTCTT+TGG | + | chr8_4:27986938-27986957 | None:intergenic | 25.0% |
| !!! | AACATTTTTGAAAAACCTAC+CGG | + | chr8_4:27986961-27986980 | None:intergenic | 25.0% |
| !!! | CTAGTTTGGTTTAAGATTTT+TGG | + | chr8_4:27986996-27987015 | None:intergenic | 25.0% |
| !!! | AAAACTTTACCTTGTTTTCT+AGG | - | chr8_4:27987016-27987035 | Msa1321790:intron | 25.0% |
| ! | CTTACCATAAAACATTATGT+AGG | - | chr8_4:27987100-27987119 | Msa1321790:intron | 25.0% |
| !!! | TTCTATTTTAACGTGTTTGT+AGG | - | chr8_4:27987207-27987226 | Msa1321790:intron | 25.0% |
| !!! | TCTATTTTAACGTGTTTGTA+GGG | - | chr8_4:27987208-27987227 | Msa1321790:intron | 25.0% |
| ! | AACAACATTCAAGCAATATT+AGG | + | chr8_4:27987296-27987315 | None:intergenic | 25.0% |
| !!! | TAACTATCGCTAAGTTTTTT+TGG | - | chr8_4:27987416-27987435 | Msa1321790:intron | 25.0% |
| ! | TTTCATATTGCTCAATTGAT+GGG | - | chr8_4:27987485-27987504 | Msa1321790:intron | 25.0% |
| !!! | GGCTGTTTTTAAGAATAATA+TGG | + | chr8_4:27987511-27987530 | None:intergenic | 25.0% |
| !!! | TCAACTAGTTTTATAGGTTT+AGG | - | chr8_4:27988222-27988241 | Msa1321790:intron | 25.0% |
| !!! | CAACTAGTTTTATAGGTTTA+GGG | - | chr8_4:27988223-27988242 | Msa1321790:intron | 25.0% |
| !!! | GTTGTTTCTATATGCTATAT+TGG | + | chr8_4:27988373-27988392 | None:intergenic | 25.0% |
| ! | TAGATATACAACTTATATGC+AGG | + | chr8_4:27988496-27988515 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTGGGATTATTTT+TGG | - | chr8_4:27988737-27988756 | Msa1321790:intron | 25.0% |
| ! | GTTAAAAAATGTATGCAAGT+AGG | - | chr8_4:27988775-27988794 | Msa1321790:intron | 25.0% |
| ! | CTGTGTTACACTATTATAAT+TGG | + | chr8_4:27989005-27989024 | None:intergenic | 25.0% |
| !!! | TATTTATTTTTGAGGGACAT+TGG | - | chr8_4:27989078-27989097 | Msa1321790:intron | 25.0% |
| ! | GTACATATTATTCTTCCATA+TGG | - | chr8_4:27989121-27989140 | Msa1321790:intron | 25.0% |
| ! | CAAATAACAAAACCGAATAA+GGG | + | chr8_4:27989693-27989712 | None:intergenic | 25.0% |
| ! | TCAAATAACAAAACCGAATA+AGG | + | chr8_4:27989694-27989713 | None:intergenic | 25.0% |
| ! | AACTGCAAAATTCAAAGAAT+TGG | - | chr8_4:27989813-27989832 | Msa1321790:intron | 25.0% |
| ! | AACATGATACTTCTAATTCT+TGG | - | chr8_4:27989916-27989935 | Msa1321790:intron | 25.0% |
| ! | ACATTATGAGCTAAGTAAAA+CGG | + | chr8_4:27990204-27990223 | None:intergenic | 25.0% |
| ! | GAAAATTAATGCTAACATTG+TGG | - | chr8_4:27990239-27990258 | Msa1321790:intron | 25.0% |
| ! | AAGAGTAGATAAAATATCAC+AGG | - | chr8_4:27990325-27990344 | Msa1321790:intron | 25.0% |
| !! | ATGTATGAAGACTAGATTTT+AGG | + | chr8_4:27990387-27990406 | None:intergenic | 25.0% |
| ! | GATAATGCATAATATATGCA+AGG | - | chr8_4:27990452-27990471 | Msa1321790:intron | 25.0% |
| !!! | GCTTATCTTTTTTTTTTTGG+TGG | + | chr8_4:27990500-27990519 | None:intergenic | 25.0% |
| !!! | ATCAAGTTTGCATCTTTTTT+GGG | + | chr8_4:27990756-27990775 | None:intergenic | 25.0% |
| !!! | AATCAAGTTTGCATCTTTTT+TGG | + | chr8_4:27990757-27990776 | None:intergenic | 25.0% |
| !!! | TCCATTTTTTCTGAATATCA+AGG | - | chr8_4:27990806-27990825 | Msa1321790:intron | 25.0% |
| ! | TCCTTGATATTCAGAAAAAA+TGG | + | chr8_4:27990810-27990829 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGAATATCAAGGA+TGG | - | chr8_4:27990810-27990829 | Msa1321790:intron | 25.0% |
| ! | ACCATAATTTAGGCATAATA+TGG | + | chr8_4:27991117-27991136 | None:intergenic | 25.0% |
| ! | GAATATGAAAGCATGACATA+AGG | - | chr8_4:27981059-27981078 | Msa1321790:three_prime_UTR | 30.0% |
| !!! | TTTATTTTGGATCTGCATTG+TGG | - | chr8_4:27981130-27981149 | Msa1321790:three_prime_UTR | 30.0% |
| !!! | TTATTTTGGATCTGCATTGT+GGG | - | chr8_4:27981131-27981150 | Msa1321790:three_prime_UTR | 30.0% |
| ACACTTAAGCTGCATAAAAT+CGG | + | chr8_4:27981264-27981283 | None:intergenic | 30.0% | |
| !! | TTTTGAAAAGTAGGCACATA+AGG | - | chr8_4:27981626-27981645 | Msa1321790:intron | 30.0% |
| TGGTATATGTGAATCAATTG+TGG | - | chr8_4:27981865-27981884 | Msa1321790:intron | 30.0% | |
| ! | CAATTGTGGCATGAATATTT+TGG | - | chr8_4:27981879-27981898 | Msa1321790:intron | 30.0% |
| ATGTATTGTCATACACACAT+TGG | - | chr8_4:27982073-27982092 | Msa1321790:CDS | 30.0% | |
| TGAATTTGTCTTCACACTTA+AGG | - | chr8_4:27982204-27982223 | Msa1321790:intron | 30.0% | |
| GAATTTGTCTTCACACTTAA+GGG | - | chr8_4:27982205-27982224 | Msa1321790:intron | 30.0% | |
| TATGTTGCTAAGTAACCATA+AGG | + | chr8_4:27982242-27982261 | None:intergenic | 30.0% | |
| ATGGTTACTTAGCAACATAA+TGG | - | chr8_4:27982243-27982262 | Msa1321790:intron | 30.0% | |
| TAATTCAGCCTACATTATGT+CGG | - | chr8_4:27982268-27982287 | Msa1321790:intron | 30.0% | |
| !! | GGAATGGTCTTAATTTTACA+AGG | + | chr8_4:27982299-27982318 | None:intergenic | 30.0% |
| TTGCGTAGATTTGATTCAAT+TGG | - | chr8_4:27982397-27982416 | Msa1321790:CDS | 30.0% | |
| ATCGCAGGTATGTAATTATT+CGG | + | chr8_4:27982495-27982514 | None:intergenic | 30.0% | |
| !! | CTTCTTAAGTTTTATCCATG+TGG | - | chr8_4:27982590-27982609 | Msa1321790:intron | 30.0% |
| ! | TTTTATCCATGTGGATAATG+AGG | - | chr8_4:27982599-27982618 | Msa1321790:intron | 30.0% |
| AATAAGTCCTGTCAGATAAT+GGG | + | chr8_4:27982839-27982858 | None:intergenic | 30.0% | |
| TAATAAGTCCTGTCAGATAA+TGG | + | chr8_4:27982840-27982859 | None:intergenic | 30.0% | |
| TCAGTGCAATGATCAAATAT+TGG | + | chr8_4:27982863-27982882 | None:intergenic | 30.0% | |
| TGCTAAGAATTAATTGCAAG+CGG | + | chr8_4:27982891-27982910 | None:intergenic | 30.0% | |
| AAGCACCTTAGTTTAAACAA+AGG | + | chr8_4:27983542-27983561 | None:intergenic | 30.0% | |
| ! | TTATTTGCCCTTATCTTTTG+AGG | + | chr8_4:27983858-27983877 | None:intergenic | 30.0% |
| ! | ATTTTTCGTCCCACAAATTA+AGG | - | chr8_4:27984203-27984222 | Msa1321790:intron | 30.0% |
| TTTCTTGAGGATATTGAGTT+TGG | - | chr8_4:27984252-27984271 | Msa1321790:intron | 30.0% | |
| TTCTTGAGGATATTGAGTTT+GGG | - | chr8_4:27984253-27984272 | Msa1321790:intron | 30.0% | |
| !!! | AGTATTTTTGGATCCTCATA+AGG | - | chr8_4:27984350-27984369 | Msa1321790:intron | 30.0% |
| AGAACAATAATGTCCTTATG+AGG | + | chr8_4:27984366-27984385 | None:intergenic | 30.0% | |
| TTATAGCTACATAAGATGGA+TGG | - | chr8_4:27984543-27984562 | Msa1321790:intron | 30.0% | |
| ! | GAAGAAAACTTTTGTGTCAA+TGG | - | chr8_4:27984616-27984635 | Msa1321790:intron | 30.0% |
| !! | ATGTTTGTTATGTGAAACCA+AGG | - | chr8_4:27984852-27984871 | Msa1321790:intron | 30.0% |
| ! | ACTTTTGTTAGAGATTTCCT+TGG | + | chr8_4:27984872-27984891 | None:intergenic | 30.0% |
| TTACAGTCATTTCATGAGTT+AGG | + | chr8_4:27985350-27985369 | None:intergenic | 30.0% | |
| CTGTAAGTATTTATGTCACT+TGG | - | chr8_4:27985364-27985383 | Msa1321790:intron | 30.0% | |
| ATGTCACTATATAACTTGAG+TGG | + | chr8_4:27985417-27985436 | None:intergenic | 30.0% | |
| ATTCAAAGACATGACACATA+AGG | - | chr8_4:27985550-27985569 | Msa1321790:intron | 30.0% | |
| TGCACAAAATGATACAGAAA+TGG | + | chr8_4:27985725-27985744 | None:intergenic | 30.0% | |
| ! | ATCTCACTAAAGTTTTCAGT+TGG | - | chr8_4:27985773-27985792 | Msa1321790:intron | 30.0% |
| CCACCTCATACATTAATAAT+GGG | + | chr8_4:27985947-27985966 | None:intergenic | 30.0% | |
| TCCACCTCATACATTAATAA+TGG | + | chr8_4:27985948-27985967 | None:intergenic | 30.0% | |
| TAGATTTCAACCTTACAATC+TGG | + | chr8_4:27985971-27985990 | None:intergenic | 30.0% | |
| ATTTGCCCACATTATGATAT+TGG | + | chr8_4:27986099-27986118 | None:intergenic | 30.0% | |
| TTTCCCATTATTCCGTTAAT+GGG | + | chr8_4:27986274-27986293 | None:intergenic | 30.0% | |
| TTTATATTGGATGGCCATTA+GGG | + | chr8_4:27986297-27986316 | None:intergenic | 30.0% | |
| ! | TTTTATATTGGATGGCCATT+AGG | + | chr8_4:27986298-27986317 | None:intergenic | 30.0% |
| ! | ATAGCCTCTTTTATATTGGA+TGG | + | chr8_4:27986306-27986325 | None:intergenic | 30.0% |
| ATCCAATATAAAAGAGGCTA+TGG | - | chr8_4:27986305-27986324 | Msa1321790:intron | 30.0% | |
| ! | AGAACTTGGAATAAGTTTTC+CGG | - | chr8_4:27986939-27986958 | Msa1321790:intron | 30.0% |
| !!! | CAAGGTAAAGTTTTCTAGTT+TGG | + | chr8_4:27987010-27987029 | None:intergenic | 30.0% |
| ! | CACTCCTACATAATGTTTTA+TGG | + | chr8_4:27987107-27987126 | None:intergenic | 30.0% |
| !!! | CTATTTTAACGTGTTTGTAG+GGG | - | chr8_4:27987209-27987228 | Msa1321790:intron | 30.0% |
| ATTCAAGCAATATTAGGTTC+AGG | + | chr8_4:27987290-27987309 | None:intergenic | 30.0% | |
| ! | CATGTGTTTCTAAGAAACTA+TGG | + | chr8_4:27987329-27987348 | None:intergenic | 30.0% |
| CATAGTTTCTTAGAAACACA+TGG | - | chr8_4:27987327-27987346 | Msa1321790:intron | 30.0% | |
| !!! | GTTTTCTATTTTAAAGCCAG+GGG | + | chr8_4:27987386-27987405 | None:intergenic | 30.0% |
| !!! | GGTTTTCTATTTTAAAGCCA+GGG | + | chr8_4:27987387-27987406 | None:intergenic | 30.0% |
| !! | GCTTTAAAATAGAAAACCGA+GGG | - | chr8_4:27987389-27987408 | Msa1321790:intron | 30.0% |
| CATAATTTCTTGGAAACACA+TGG | + | chr8_4:27987448-27987467 | None:intergenic | 30.0% | |
| CATGTGTTTCCAAGAAATTA+TGG | - | chr8_4:27987446-27987465 | Msa1321790:intron | 30.0% | |
| CTTTCATATTGCTCAATTGA+TGG | - | chr8_4:27987484-27987503 | Msa1321790:intron | 30.0% | |
| TTGTAGGCTTAATGTATGTT+TGG | - | chr8_4:27988027-27988046 | Msa1321790:intron | 30.0% | |
| !!! | GTTTGGACTAGCTTATTTTA+AGG | - | chr8_4:27988044-27988063 | Msa1321790:intron | 30.0% |
| ! | CCTGTATTTTCGATAATCAA+TGG | + | chr8_4:27988155-27988174 | None:intergenic | 30.0% |
| ! | CCATTGATTATCGAAAATAC+AGG | - | chr8_4:27988152-27988171 | Msa1321790:intron | 30.0% |
| TATCATAAAACTTATGCCAG+TGG | + | chr8_4:27988278-27988297 | None:intergenic | 30.0% | |
| GCTAATCTAAACATGCATTA+AGG | + | chr8_4:27988525-27988544 | None:intergenic | 30.0% | |
| !! | TTTAGATTAGCTTGTAGTCA+AGG | - | chr8_4:27988534-27988553 | Msa1321790:intron | 30.0% |
| GTCAGTGAAATAATCACAAA+AGG | + | chr8_4:27988708-27988727 | None:intergenic | 30.0% | |
| !! | ACAGTTTGATGCTTGTTTTT+GGG | - | chr8_4:27988726-27988745 | Msa1321790:intron | 30.0% |
| TAAATATTACTAGGGGAGAA+TGG | + | chr8_4:27989064-27989083 | None:intergenic | 30.0% | |
| CATGATAACTCATATCCATA+TGG | + | chr8_4:27989139-27989158 | None:intergenic | 30.0% | |
| ! | TTTAAGATTCACGAACAACT+CGG | + | chr8_4:27989342-27989361 | None:intergenic | 30.0% |
| ! | TATGTTTGTCCACATGATTT+TGG | - | chr8_4:27989443-27989462 | Msa1321790:intron | 30.0% |
| ! | ATGTTTGTCCACATGATTTT+GGG | - | chr8_4:27989444-27989463 | Msa1321790:intron | 30.0% |
| ACTCTTCAATCAACATCAAA+CGG | + | chr8_4:27989617-27989636 | None:intergenic | 30.0% | |
| TAATACCAATCAGGATCATA+GGG | + | chr8_4:27989841-27989860 | None:intergenic | 30.0% | |
| ATAATACCAATCAGGATCAT+AGG | + | chr8_4:27989842-27989861 | None:intergenic | 30.0% | |
| !! | GTTAGCATTAATTTTCAAGC+AGG | + | chr8_4:27990235-27990254 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGGTGGTGTCT+AGG | + | chr8_4:27990492-27990511 | None:intergenic | 30.0% |
| ATTAAGCATCACACATTTGA+AGG | - | chr8_4:27990939-27990958 | Msa1321790:intron | 30.0% | |
| GCCATATTATGCCTAAATTA+TGG | - | chr8_4:27991113-27991132 | Msa1321790:intron | 30.0% | |
| GGTAGCTAAAACCATAATTT+AGG | + | chr8_4:27991127-27991146 | None:intergenic | 30.0% | |
| AGGCAAAGAAATAATGTCAA+AGG | + | chr8_4:27991284-27991303 | None:intergenic | 30.0% | |
| ! | TTTGCCTAATTACACGTTTT+CGG | - | chr8_4:27991297-27991316 | Msa1321790:intron | 30.0% |
| TGATTGGAAATTCTTGTCTC+TGG | - | chr8_4:27981014-27981033 | Msa1321790:three_prime_UTR | 35.0% | |
| !! | GAAAGCATGACATAAGGTTT+TGG | - | chr8_4:27981065-27981084 | Msa1321790:three_prime_UTR | 35.0% |
| GAATAATTACATACCTGCGA+TGG | - | chr8_4:27982494-27982513 | Msa1321790:intron | 35.0% | |
| AAGAAGTCCTGTCAGATAAT+GGG | + | chr8_4:27982576-27982595 | None:intergenic | 35.0% | |
| TAAGAAGTCCTGTCAGATAA+TGG | + | chr8_4:27982577-27982596 | None:intergenic | 35.0% | |
| TGGATAATGAGGATGTCAAA+AGG | - | chr8_4:27982548-27982567 | Msa1321790:intron | 35.0% | |
| AATAAGTCCTGTCAGACAAT+GGG | + | chr8_4:27982638-27982657 | None:intergenic | 35.0% | |
| TAATAAGTCCTGTCAGACAA+TGG | + | chr8_4:27982639-27982658 | None:intergenic | 35.0% | |
| !!! | TGCGTTTGGTATCTTGTTTT+TGG | - | chr8_4:27982732-27982751 | Msa1321790:intron | 35.0% |
| ! | AATTTTCCATGTGGGTAATG+AGG | - | chr8_4:27982800-27982819 | Msa1321790:intron | 35.0% |
| GTTTACATCTACACTTGTGA+TGG | - | chr8_4:27983061-27983080 | Msa1321790:intron | 35.0% | |
| !! | CTTGATATTGATGATGCACT+AGG | - | chr8_4:27983188-27983207 | Msa1321790:intron | 35.0% |
| TTGGATCTAGACCTTAGATA+AGG | - | chr8_4:27983348-27983367 | Msa1321790:intron | 35.0% | |
| ATCTAGACCTTAGATAAGGA+TGG | - | chr8_4:27983352-27983371 | Msa1321790:intron | 35.0% | |
| AGTTTCACCATCCTTATCTA+AGG | + | chr8_4:27983362-27983381 | None:intergenic | 35.0% | |
| GAGTATACACCAAATTCCAT+AGG | - | chr8_4:27983433-27983452 | Msa1321790:intron | 35.0% | |
| TCTTGAGGATATTGAGTTTG+GGG | - | chr8_4:27984254-27984273 | Msa1321790:intron | 35.0% | |
| GTCAATGGATACAAAGTAGA+TGG | - | chr8_4:27984631-27984650 | Msa1321790:intron | 35.0% | |
| TGTGAATTTAGAAAGCTCAG+TGG | - | chr8_4:27984767-27984786 | Msa1321790:intron | 35.0% | |
| GTGAATTTAGAAAGCTCAGT+GGG | - | chr8_4:27984768-27984787 | Msa1321790:intron | 35.0% | |
| AGTTTAGCGATGAAAGATCT+TGG | - | chr8_4:27984889-27984908 | Msa1321790:intron | 35.0% | |
| GTTTAGCGATGAAAGATCTT+GGG | - | chr8_4:27984890-27984909 | Msa1321790:intron | 35.0% | |
| TTTAGCGATGAAAGATCTTG+GGG | - | chr8_4:27984891-27984910 | Msa1321790:intron | 35.0% | |
| TATCCTTCAGATGTCACAAA+AGG | - | chr8_4:27984962-27984981 | Msa1321790:intron | 35.0% | |
| ! | AAACCTTTTGTGACATCTGA+AGG | + | chr8_4:27984968-27984987 | None:intergenic | 35.0% |
| ! | TTTTCCTACGCTTTGTCTAT+AGG | - | chr8_4:27985105-27985124 | Msa1321790:intron | 35.0% |
| AAATCCTATAGACAAAGCGT+AGG | + | chr8_4:27985112-27985131 | None:intergenic | 35.0% | |
| ACATCAGAGATCTGACAATT+TGG | - | chr8_4:27985271-27985290 | Msa1321790:intron | 35.0% | |
| ACTTGGTTGCATATCGTTAA+AGG | - | chr8_4:27985381-27985400 | Msa1321790:intron | 35.0% | |
| TGTGTCATGTCTTTGAATAG+CGG | + | chr8_4:27985548-27985567 | None:intergenic | 35.0% | |
| TGTTGTCATTAAGGATGTCT+TGG | - | chr8_4:27985586-27985605 | Msa1321790:intron | 35.0% | |
| ! | TTAAGGATGTCTTGGATTAG+TGG | - | chr8_4:27985594-27985613 | Msa1321790:intron | 35.0% |
| !! | TAAGGATGTCTTGGATTAGT+GGG | - | chr8_4:27985595-27985614 | Msa1321790:intron | 35.0% |
| CTGCAGATATAAAGTTCATG+AGG | - | chr8_4:27985684-27985703 | Msa1321790:intron | 35.0% | |
| ! | AAGTTTTCAGTTGGATCAGT+TGG | - | chr8_4:27985782-27985801 | Msa1321790:intron | 35.0% |
| ! | CTTGATGACATAGATCGATA+TGG | + | chr8_4:27985859-27985878 | None:intergenic | 35.0% |
| ATCTATGTCATCAAGTGCAT+TGG | - | chr8_4:27985864-27985883 | Msa1321790:intron | 35.0% | |
| GGTCCCATTATTAATGTATG+AGG | - | chr8_4:27985941-27985960 | Msa1321790:intron | 35.0% | |
| CCCATTATTAATGTATGAGG+TGG | - | chr8_4:27985944-27985963 | Msa1321790:intron | 35.0% | |
| ATTAAGATATGTAGCCCAAG+TGG | - | chr8_4:27986038-27986057 | Msa1321790:intron | 35.0% | |
| TTAAGATATGTAGCCCAAGT+GGG | - | chr8_4:27986039-27986058 | Msa1321790:intron | 35.0% | |
| GTTTCCCATTATTCCGTTAA+TGG | + | chr8_4:27986275-27986294 | None:intergenic | 35.0% | |
| ATGGCCATCCAATATAAAAG+AGG | - | chr8_4:27986299-27986318 | Msa1321790:intron | 35.0% | |
| ATAAACAACAACATTAGCGG+CGG | + | chr8_4:27986424-27986443 | None:intergenic | 35.0% | |
| CAACAACGATAAAGAAAGAG+AGG | + | chr8_4:27986490-27986509 | None:intergenic | 35.0% | |
| ! | TCTTTATCGTTGTTGTTGAG+AGG | - | chr8_4:27986495-27986514 | Msa1321790:intron | 35.0% |
| ATACCTGGATAAAGCTTTCA+TGG | + | chr8_4:27986525-27986544 | None:intergenic | 35.0% | |
| ! | ATTAGGGTATTAGGAATACC+TGG | + | chr8_4:27986540-27986559 | None:intergenic | 35.0% |
| ACAGAGACTGTTGGAAATTT+AGG | + | chr8_4:27986688-27986707 | None:intergenic | 35.0% | |
| CTTATTCCAAGTTCTTTGGT+TGG | + | chr8_4:27986934-27986953 | None:intergenic | 35.0% | |
| TGTTGTCAACCTAGAAAACA+AGG | + | chr8_4:27987028-27987047 | None:intergenic | 35.0% | |
| !! | GTTTTCTAGGTTGACAACAT+TGG | - | chr8_4:27987029-27987048 | Msa1321790:intron | 35.0% |
| AACTCATGCTAAATCCGAAA+AGG | - | chr8_4:27987127-27987146 | Msa1321790:intron | 35.0% | |
| ! | ACTCTCAGTTTCAACCTTTT+CGG | + | chr8_4:27987144-27987163 | None:intergenic | 35.0% |
| !!! | CGGTTTTCTATTTTAAAGCC+AGG | + | chr8_4:27987388-27987407 | None:intergenic | 35.0% |
| !! | GGCTTTAAAATAGAAAACCG+AGG | - | chr8_4:27987388-27987407 | Msa1321790:intron | 35.0% |
| GTGTTTCCAAGAAATTATGG+AGG | - | chr8_4:27987449-27987468 | Msa1321790:intron | 35.0% | |
| TTCTCACCTCCATAATTTCT+TGG | + | chr8_4:27987458-27987477 | None:intergenic | 35.0% | |
| TGTTCTGTAGCTGAATCAAA+TGG | - | chr8_4:27987911-27987930 | Msa1321790:intron | 35.0% | |
| GTGAAGATAACTACTGTTGT+AGG | - | chr8_4:27988011-27988030 | Msa1321790:intron | 35.0% | |
| TCGATAATCAATGGCATGTT+TGG | + | chr8_4:27988146-27988165 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr8_4:27988249-27988268 | None:intergenic | 35.0% | |
| ! | GCTTATTTGAGTTTATCCAC+TGG | - | chr8_4:27988259-27988278 | Msa1321790:intron | 35.0% |
| !! | GACAGTTTGATGCTTGTTTT+TGG | - | chr8_4:27988725-27988744 | Msa1321790:intron | 35.0% |
| GACAATTAACTCGTTGAACT+TGG | - | chr8_4:27988845-27988864 | Msa1321790:intron | 35.0% | |
| TATATACAGTTCAGCTCGTT+TGG | - | chr8_4:27988937-27988956 | Msa1321790:intron | 35.0% | |
| AACACAGAATGTTGATGCAA+TGG | - | chr8_4:27989018-27989037 | Msa1321790:intron | 35.0% | |
| !!! | CTTTTTTTTGAGCTCGAGTT+CGG | + | chr8_4:27989369-27989388 | None:intergenic | 35.0% |
| TCATGTGGACAAACATAGTT+TGG | + | chr8_4:27989440-27989459 | None:intergenic | 35.0% | |
| !! | TCCACATGATTTTGGGAATT+GGG | - | chr8_4:27989451-27989470 | Msa1321790:intron | 35.0% |
| ! | GCTTTTCAAAATCCATAGCA+CGG | + | chr8_4:27989485-27989504 | None:intergenic | 35.0% |
| ! | TGTTGATTGAAGAGTCCAAA+TGG | - | chr8_4:27989622-27989641 | Msa1321790:intron | 35.0% |
| GTTGATTGAAGAGTCCAAAT+GGG | - | chr8_4:27989623-27989642 | Msa1321790:intron | 35.0% | |
| TTGATTGAAGAGTCCAAATG+GGG | - | chr8_4:27989624-27989643 | Msa1321790:intron | 35.0% | |
| GCTCTAACATAATACCAATC+AGG | + | chr8_4:27989850-27989869 | None:intergenic | 35.0% | |
| GATTGGTATTATGTTAGAGC+TGG | - | chr8_4:27989850-27989869 | Msa1321790:intron | 35.0% | |
| GGTTCATTCCAAAGGATTTA+TGG | - | chr8_4:27990038-27990057 | Msa1321790:intron | 35.0% | |
| TCATTCCAAAGGATTTATGG+TGG | - | chr8_4:27990041-27990060 | Msa1321790:intron | 35.0% | |
| CATTCCAAAGGATTTATGGT+GGG | - | chr8_4:27990042-27990061 | Msa1321790:intron | 35.0% | |
| GAAAAAAGAGTTCTACCCTT+TGG | + | chr8_4:27990174-27990193 | None:intergenic | 35.0% | |
| CAGTTGAGAGAAATAGTACT+AGG | + | chr8_4:27990351-27990370 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+TGG | - | chr8_4:27990457-27990476 | Msa1321790:intron | 35.0% | |
| GCATAATATATGCAAGGTCT+GGG | - | chr8_4:27990458-27990477 | Msa1321790:intron | 35.0% | |
| CATAATATATGCAAGGTCTG+GGG | - | chr8_4:27990459-27990478 | Msa1321790:intron | 35.0% | |
| ! | TATAATCTAGCTTATGCGGT+CGG | - | chr8_4:27990595-27990614 | Msa1321790:intron | 35.0% |
| ! | CAAGTAGATTTAGAGCTGTT+TGG | + | chr8_4:27990683-27990702 | None:intergenic | 35.0% |
| TTGCTACAGACAATACTGTA+CGG | + | chr8_4:27990716-27990735 | None:intergenic | 35.0% | |
| !! | TGCAAACTTGATTTGCATCA+AGG | - | chr8_4:27990764-27990783 | Msa1321790:intron | 35.0% |
| !! | TATTTTTATATCCCAGTGGC+AGG | - | chr8_4:27990976-27990995 | Msa1321790:intron | 35.0% |
| ! | AAGCTTTTGCTGACAAATCA+AGG | + | chr8_4:27991062-27991081 | None:intergenic | 35.0% |
| AGATTGTTCAATCTTCACTC+TGG | - | chr8_4:27991232-27991251 | Msa1321790:intron | 35.0% | |
| TGATCCGAAAACGTGTAATT+AGG | + | chr8_4:27991304-27991323 | None:intergenic | 35.0% | |
| GAATCAAATCTACGCAACAG+AGG | + | chr8_4:27982394-27982413 | None:intergenic | 40.0% | |
| !!! | TTCATGCGAGCTGTTTTAGT+CGG | - | chr8_4:27982447-27982466 | Msa1321790:intron | 40.0% |
| TACCTGCGATGGTAAATATG+CGG | - | chr8_4:27982505-27982524 | Msa1321790:intron | 40.0% | |
| AGGTTTCCATGTGGATAATG+AGG | - | chr8_4:27982537-27982556 | Msa1321790:intron | 40.0% | |
| TGACATCCTCATTATCCACA+TGG | + | chr8_4:27982546-27982565 | None:intergenic | 40.0% | |
| AAAGACACCCATTATCTGAC+AGG | - | chr8_4:27982566-27982585 | Msa1321790:intron | 40.0% | |
| TGACATCCTCATTATCCACA+TGG | + | chr8_4:27982546-27982565 | None:intergenic | 40.0% | |
| !!! | TTGTGTTTTAACGGTGCGTT+TGG | - | chr8_4:27982718-27982737 | Msa1321790:intron | 40.0% |
| TGGGTAATGAGGATGTCAAA+AGG | - | chr8_4:27982811-27982830 | Msa1321790:intron | 40.0% | |
| !!! | TTGTGTTTTAATGGTGCGCT+TGG | - | chr8_4:27982920-27982939 | Msa1321790:intron | 40.0% |
| TTATGATCACACGTGACCTA+TGG | + | chr8_4:27983452-27983471 | None:intergenic | 40.0% | |
| AGAGAAAGACAAGCTCTCAT+TGG | - | chr8_4:27983574-27983593 | Msa1321790:intron | 40.0% | |
| CTTGAGGATATTGAGTTTGG+GGG | - | chr8_4:27984255-27984274 | Msa1321790:intron | 40.0% | |
| GGCAATACAGCGTTTCTTAA+TGG | - | chr8_4:27984564-27984583 | Msa1321790:intron | 40.0% | |
| ! | TTGTGTCAGACTCTGACTTT+TGG | - | chr8_4:27985303-27985322 | Msa1321790:intron | 40.0% |
| CATAGATCGATATGGATGAG+TGG | + | chr8_4:27985851-27985870 | None:intergenic | 40.0% | |
| ! | TGTCATCAAGTGCATTGGTA+TGG | - | chr8_4:27985869-27985888 | Msa1321790:intron | 40.0% |
| ATTCCAACAATCTCCCACTT+GGG | + | chr8_4:27986055-27986074 | None:intergenic | 40.0% | |
| TATTCCAACAATCTCCCACT+TGG | + | chr8_4:27986056-27986075 | None:intergenic | 40.0% | |
| GTTGATATGGACTCAATGAG+TGG | - | chr8_4:27986236-27986255 | Msa1321790:intron | 40.0% | |
| ATGGCCCATTAACGGAATAA+TGG | - | chr8_4:27986267-27986286 | Msa1321790:intron | 40.0% | |
| TGGCCCATTAACGGAATAAT+GGG | - | chr8_4:27986268-27986287 | Msa1321790:intron | 40.0% | |
| ! | GGAATAATGGGAAACCCTAA+TGG | - | chr8_4:27986280-27986299 | Msa1321790:intron | 40.0% |
| ! | GGCCATAGCCTCTTTTATAT+TGG | + | chr8_4:27986310-27986329 | None:intergenic | 40.0% |
| TTTGCCGTGTTCGGTATATT+GGG | + | chr8_4:27986333-27986352 | None:intergenic | 40.0% | |
| GAAGAGAACTTGAGGCATAA+AGG | - | chr8_4:27986372-27986391 | Msa1321790:intron | 40.0% | |
| ! | AACTTGAGGCATAAAGGTAC+CGG | - | chr8_4:27986378-27986397 | Msa1321790:intron | 40.0% |
| !! | TGATTTGGTTCTTCCTCAAC+CGG | + | chr8_4:27986400-27986419 | None:intergenic | 40.0% |
| ! | TTGCCATGAAAGCTTTATCC+AGG | - | chr8_4:27986519-27986538 | Msa1321790:intron | 40.0% |
| AAGATGTACTAGACTAGGCT+GGG | + | chr8_4:27986754-27986773 | None:intergenic | 40.0% | |
| ACGAGAAGATGTACTAGACT+AGG | + | chr8_4:27986759-27986778 | None:intergenic | 40.0% | |
| AACCTACCAACCAAAGAACT+TGG | - | chr8_4:27986925-27986944 | Msa1321790:intron | 40.0% | |
| TTCCAAGTTCTTTGGTTGGT+AGG | + | chr8_4:27986930-27986949 | None:intergenic | 40.0% | |
| ! | CTTGGAATAAGTTTTCCGGT+AGG | - | chr8_4:27986943-27986962 | Msa1321790:intron | 40.0% |
| AACGTGTTTGTAGGGGTAAA+AGG | - | chr8_4:27987216-27987235 | Msa1321790:intron | 40.0% | |
| TAGGGGTAAAAGGTCAATAG+TGG | - | chr8_4:27987226-27987245 | Msa1321790:intron | 40.0% | |
| TATGAGAGTGAAACCCTAGT+TGG | - | chr8_4:27987613-27987632 | Msa1321790:intron | 40.0% | |
| ATCACCATTAGCATTAGCCA+TGG | - | chr8_4:27987659-27987678 | Msa1321790:intron | 40.0% | |
| ! | TTATAGGTTTAGGGCCTGTT+TGG | - | chr8_4:27988232-27988251 | Msa1321790:intron | 40.0% |
| AAAATGTATGCAAGTAGGGC+TGG | - | chr8_4:27988780-27988799 | Msa1321790:intron | 40.0% | |
| ! | GAACTTTGTTCGAGTTAGCT+CGG | + | chr8_4:27988813-27988832 | None:intergenic | 40.0% |
| GAGCTAACTCGAACAAAGTT+CGG | - | chr8_4:27988812-27988831 | Msa1321790:intron | 40.0% | |
| ! | CTGATAGAGACACAACGTTT+TGG | - | chr8_4:27989166-27989185 | Msa1321790:intron | 40.0% |
| !! | GTCCACATGATTTTGGGAAT+TGG | - | chr8_4:27989450-27989469 | Msa1321790:intron | 40.0% |
| ACCCAATTCCCAAAATCATG+TGG | + | chr8_4:27989455-27989474 | None:intergenic | 40.0% | |
| !! | CATGATTTTGGGAATTGGGT+TGG | - | chr8_4:27989455-27989474 | Msa1321790:intron | 40.0% |
| TTTGCGCTCGAAATCTGATA+AGG | + | chr8_4:27989539-27989558 | None:intergenic | 40.0% | |
| ! | TCTTGGTATTTTGTTGCTGC+TGG | - | chr8_4:27989933-27989952 | Msa1321790:intron | 40.0% |
| GTACTCAATTTCAGCTTCCA+TGG | - | chr8_4:27989980-27989999 | Msa1321790:intron | 40.0% | |
| TATGTAGATCTTCCTTGCCA+TGG | + | chr8_4:27990000-27990019 | None:intergenic | 40.0% | |
| GCAAGGAAGATCTACATAAG+AGG | - | chr8_4:27990002-27990021 | Msa1321790:intron | 40.0% | |
| AGGAAGATCTACATAAGAGG+CGG | - | chr8_4:27990005-27990024 | Msa1321790:intron | 40.0% | |
| !! | TTGGTGTTGGTTCATTCCAA+AGG | - | chr8_4:27990030-27990049 | Msa1321790:intron | 40.0% |
| TGCTCTTGCAAAAATGTGGA+GGG | + | chr8_4:27990088-27990107 | None:intergenic | 40.0% | |
| TCGTCACATTCTTCAACAGT+TGG | - | chr8_4:27990121-27990140 | Msa1321790:intron | 40.0% | |
| TCATCGAGATGGATACCAAA+GGG | - | chr8_4:27990156-27990175 | Msa1321790:intron | 40.0% | |
| AGCTAAGTAAAACGGAGCAA+AGG | + | chr8_4:27990196-27990215 | None:intergenic | 40.0% | |
| ! | GATGTAATTTTCCTGCCACT+GGG | + | chr8_4:27990990-27991009 | None:intergenic | 40.0% |
| AGGCACTACCGACATAATGT+AGG | + | chr8_4:27982279-27982298 | None:intergenic | 45.0% | |
| !!! | AGCTGTTTTAGTCGGCCAAA+AGG | - | chr8_4:27982455-27982474 | Msa1321790:intron | 45.0% |
| !! | GTTTTAGTCGGCCAAAAGGA+AGG | - | chr8_4:27982459-27982478 | Msa1321790:intron | 45.0% |
| TACCGCATATTTACCATCGC+AGG | + | chr8_4:27982510-27982529 | None:intergenic | 45.0% | |
| TGACATCCTCATTACCCACA+TGG | + | chr8_4:27982809-27982828 | None:intergenic | 45.0% | |
| !! | AAAGGCACCCATTATCTGAC+AGG | - | chr8_4:27982829-27982848 | Msa1321790:intron | 45.0% |
| CACACGTGACCTATGGAATT+TGG | + | chr8_4:27983445-27983464 | None:intergenic | 45.0% | |
| TTGAGTTTGGGGGAGAGATA+TGG | - | chr8_4:27984265-27984284 | Msa1321790:intron | 45.0% | |
| ACTCAACACCCTCAAGAACT+AGG | - | chr8_4:27984426-27984445 | Msa1321790:intron | 45.0% | |
| CTCAACACCCTCAAGAACTA+GGG | - | chr8_4:27984427-27984446 | Msa1321790:intron | 45.0% | |
| ATCGATATGGATGAGTGGCA+TGG | + | chr8_4:27985846-27985865 | None:intergenic | 45.0% | |
| ! | CATCAAGTGCATTGGTATGG+TGG | - | chr8_4:27985872-27985891 | Msa1321790:intron | 45.0% |
| GTCACTGACGTATAACGTGA+CGG | + | chr8_4:27985909-27985928 | None:intergenic | 45.0% | |
| ! | CATTAATAATGGGACCACCG+CGG | + | chr8_4:27985937-27985956 | None:intergenic | 45.0% |
| ATGAGGTGGACCAGATTGTA+AGG | - | chr8_4:27985958-27985977 | Msa1321790:intron | 45.0% | |
| ! | TATTCCGTTAATGGGCCATC+CGG | + | chr8_4:27986266-27986285 | None:intergenic | 45.0% |
| TTGCCGTGTTCGGTATATTG+GGG | + | chr8_4:27986332-27986351 | None:intergenic | 45.0% | |
| GTTTGCCGTGTTCGGTATAT+TGG | + | chr8_4:27986334-27986353 | None:intergenic | 45.0% | |
| AAGAGAGAGTTTGCCGTGTT+CGG | + | chr8_4:27986342-27986361 | None:intergenic | 45.0% | |
| CCTCAAGTTCTCTTCAGATG+GGG | + | chr8_4:27986367-27986386 | None:intergenic | 45.0% | |
| GCCTCAAGTTCTCTTCAGAT+GGG | + | chr8_4:27986368-27986387 | None:intergenic | 45.0% | |
| TGCCTCAAGTTCTCTTCAGA+TGG | + | chr8_4:27986369-27986388 | None:intergenic | 45.0% | |
| GAAGATGTACTAGACTAGGC+TGG | + | chr8_4:27986755-27986774 | None:intergenic | 45.0% | |
| TAGTGGTAGTTATCTACCCC+TGG | - | chr8_4:27987367-27987386 | Msa1321790:intron | 45.0% | |
| TAGCGATAGTTAACTGCCCT+CGG | + | chr8_4:27987408-27987427 | None:intergenic | 45.0% | |
| CTACACAGCAATGCCAACTA+GGG | + | chr8_4:27987629-27987648 | None:intergenic | 45.0% | |
| TAGTTGGCATTGCTGTGTAG+CGG | - | chr8_4:27987629-27987648 | Msa1321790:intron | 45.0% | |
| GAAGCCATGGCTAATGCTAA+TGG | + | chr8_4:27987666-27987685 | None:intergenic | 45.0% | |
| ! | CACAGTCTTTGAAGAAGCCA+TGG | + | chr8_4:27987679-27987698 | None:intergenic | 45.0% |
| GGCTTCTTCAAAGACTGTGA+AGG | - | chr8_4:27987680-27987699 | Msa1321790:intron | 45.0% | |
| GTGAAGGATGTTTCACCTCA+CGG | - | chr8_4:27987696-27987715 | Msa1321790:intron | 45.0% | |
| TTCACCTCACGGATTTGTCA+AGG | - | chr8_4:27987707-27987726 | Msa1321790:intron | 45.0% | |
| TAAGCCTTGACAAATCCGTG+AGG | + | chr8_4:27987714-27987733 | None:intergenic | 45.0% | |
| ATACCTTGCCAGATCGTTTG+AGG | + | chr8_4:27987746-27987765 | None:intergenic | 45.0% | |
| CAGCTCAAGTTCAGCTCATT+TGG | + | chr8_4:27988879-27988898 | None:intergenic | 45.0% | |
| TTGACAAGATCAGTCCACTC+AGG | + | chr8_4:27989793-27989812 | None:intergenic | 45.0% | |
| CAATTTCAGCTTCCATGGCA+AGG | - | chr8_4:27989985-27990004 | Msa1321790:intron | 45.0% | |
| ATCTACATAAGAGGCGGTCT+TGG | - | chr8_4:27990011-27990030 | Msa1321790:intron | 45.0% | |
| CTGCTCTTGCAAAAATGTGG+AGG | + | chr8_4:27990089-27990108 | None:intergenic | 45.0% | |
| CCACTGCTCTTGCAAAAATG+TGG | + | chr8_4:27990092-27990111 | None:intergenic | 45.0% | |
| ! | CCACATTTTTGCAAGAGCAG+TGG | - | chr8_4:27990089-27990108 | Msa1321790:intron | 45.0% |
| GAACATGAACCTCATCGAGA+TGG | - | chr8_4:27990145-27990164 | Msa1321790:intron | 45.0% | |
| CTTTGGTATCCATCTCGATG+AGG | + | chr8_4:27990157-27990176 | None:intergenic | 45.0% | |
| CTCATCGAGATGGATACCAA+AGG | - | chr8_4:27990155-27990174 | Msa1321790:intron | 45.0% | |
| TACCAACTGAGCTATGCTCA+CGG | + | chr8_4:27990430-27990449 | None:intergenic | 45.0% | |
| ! | TGAGCATAGCTCAGTTGGTA+GGG | - | chr8_4:27990430-27990449 | Msa1321790:intron | 45.0% |
| ACAAGCGCGTATCATGATGA+GGG | + | chr8_4:27990634-27990653 | None:intergenic | 45.0% | |
| ! | GGATGTAATTTTCCTGCCAC+TGG | + | chr8_4:27990991-27991010 | None:intergenic | 45.0% |
| GGCAGGAAAATTACATCCAG+TGG | - | chr8_4:27990993-27991012 | Msa1321790:intron | 45.0% | |
| GGAAAATTACATCCAGTGGC+CGG | - | chr8_4:27990997-27991016 | Msa1321790:intron | 45.0% | |
| !!! | TAAATAATTTGTTATTTTTA+GGG | - | chr8_4:27986822-27986841 | Msa1321790:intron | 5.0% |
| !!! | CAATTTTTTTTTTTTTTAAA+AGG | + | chr8_4:27989223-27989242 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAATTGAA+AGG | - | chr8_4:27989225-27989244 | Msa1321790:intron | 5.0% |
| CGTGCAATCTATTGCACGTG+TGG | - | chr8_4:27980967-27980986 | Msa1321790:three_prime_UTR | 50.0% | |
| AGGGTTGTCGAGTGACCTTA+TGG | - | chr8_4:27982224-27982243 | Msa1321790:intron | 50.0% | |
| !! | AAAGGCACCCATTGTCTGAC+AGG | - | chr8_4:27982628-27982647 | Msa1321790:intron | 50.0% |
| ! | CCAGAAGCCCTAGTTCTTGA+GGG | + | chr8_4:27984437-27984456 | None:intergenic | 50.0% |
| ! | ACCAGAAGCCCTAGTTCTTG+AGG | + | chr8_4:27984438-27984457 | None:intergenic | 50.0% |
| ! | TGCATTGGTATGGTGGTCGT+CGG | - | chr8_4:27985879-27985898 | Msa1321790:intron | 50.0% |
| TAGCCCAAGTGGGAGATTGT+TGG | - | chr8_4:27986049-27986068 | Msa1321790:intron | 50.0% | |
| GGACTCAATGAGTGGATGTC+CGG | - | chr8_4:27986244-27986263 | Msa1321790:intron | 50.0% | |
| TCAATGAGTGGATGTCCGGA+TGG | - | chr8_4:27986248-27986267 | Msa1321790:intron | 50.0% | |
| ATGTCCGGATGGCCCATTAA+CGG | - | chr8_4:27986259-27986278 | Msa1321790:intron | 50.0% | |
| TGCCGTGTTCGGTATATTGG+GGG | + | chr8_4:27986331-27986350 | None:intergenic | 50.0% | |
| CCCCATCTGAAGAGAACTTG+AGG | - | chr8_4:27986364-27986383 | Msa1321790:intron | 50.0% | |
| !! | AGGCATAAAGGTACCGGTTG+AGG | - | chr8_4:27986384-27986403 | Msa1321790:intron | 50.0% |
| AACATTAGCGGCGGCTGATT+TGG | + | chr8_4:27986415-27986434 | None:intergenic | 50.0% | |
| ATGTACTAGACTAGGCTGGG+AGG | + | chr8_4:27986751-27986770 | None:intergenic | 50.0% | |
| GCTACACAGCAATGCCAACT+AGG | + | chr8_4:27987630-27987649 | None:intergenic | 50.0% | |
| TCAGCTCACCTCAAACGATC+TGG | - | chr8_4:27987735-27987754 | Msa1321790:intron | 50.0% | |
| TCACCTCAAACGATCTGGCA+AGG | - | chr8_4:27987740-27987759 | Msa1321790:intron | 50.0% | |
| ! | GGTTTAGGGCCTGTTTGGAT+TGG | - | chr8_4:27988237-27988256 | Msa1321790:intron | 50.0% |
| AATGCGGAATGCGTGCAATG+TGG | + | chr8_4:27989664-27989683 | None:intergenic | 50.0% | |
| ACATTGCACGCATTCCGCAT+TGG | - | chr8_4:27989663-27989682 | Msa1321790:intron | 50.0% | |
| CGAATAAGGGACGACCAATG+CGG | + | chr8_4:27989680-27989699 | None:intergenic | 50.0% | |
| ! | CGCATTGGTCGTCCCTTATT+CGG | - | chr8_4:27989678-27989697 | Msa1321790:intron | 50.0% |
| AATAGTTGGAGCTGCCTGAG+TGG | - | chr8_4:27989776-27989795 | Msa1321790:intron | 50.0% | |
| TGGCTCCCTATGATCCTGAT+TGG | - | chr8_4:27989833-27989852 | Msa1321790:intron | 50.0% | |
| ! | ATAAGAGGCGGTCTTGGTGT+TGG | - | chr8_4:27990017-27990036 | Msa1321790:intron | 50.0% |
| GGCTCCCACCATAAATCCTT+TGG | + | chr8_4:27990049-27990068 | None:intergenic | 50.0% | |
| ACCAACTGAGCTATGCTCAC+GGG | + | chr8_4:27990429-27990448 | None:intergenic | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | - | chr8_4:27990429-27990448 | Msa1321790:intron | 50.0% | |
| CACAAGCGCGTATCATGATG+AGG | + | chr8_4:27990635-27990654 | None:intergenic | 50.0% | |
| AAATTACATCCAGTGGCCGG+CGG | - | chr8_4:27991000-27991019 | Msa1321790:intron | 50.0% | |
| ! | GCCAAAAGGAAGGCACAGCT+TGG | - | chr8_4:27982469-27982488 | Msa1321790:intron | 55.0% |
| ! | GCCAAGCTGTGCCTTCCTTT+TGG | + | chr8_4:27982473-27982492 | None:intergenic | 55.0% |
| CCCTCAAGAACTAGGGCTTC+TGG | - | chr8_4:27984434-27984453 | Msa1321790:intron | 55.0% | |
| ! | GCATTGGTATGGTGGTCGTC+GGG | - | chr8_4:27985880-27985899 | Msa1321790:intron | 55.0% |
| CATTGGTATGGTGGTCGTCG+GGG | - | chr8_4:27985881-27985900 | Msa1321790:intron | 55.0% | |
| GGCCCCCAATATACCGAACA+CGG | - | chr8_4:27986326-27986345 | Msa1321790:intron | 55.0% | |
| !! | TCAGCTCGACTCGGTTCGTT+AGG | + | chr8_4:27989318-27989337 | None:intergenic | 55.0% |
| CAACTCGGTTCAGCTCGACT+CGG | + | chr8_4:27989327-27989346 | None:intergenic | 55.0% | |
| !! | TGGGTTGGCTTTCCGTGCTA+TGG | - | chr8_4:27989470-27989489 | Msa1321790:intron | 55.0% |
| TGCAAGCAGCAAGCCCCATT+TGG | + | chr8_4:27989640-27989659 | None:intergenic | 55.0% | |
| ! | GGATTTATGGTGGGAGCCAG+AGG | - | chr8_4:27990051-27990070 | Msa1321790:intron | 55.0% |
| ! | TATGGTGGGAGCCAGAGGAA+TGG | - | chr8_4:27990056-27990075 | Msa1321790:intron | 55.0% |
| CCAACTGAGCTATGCTCACG+GGG | + | chr8_4:27990428-27990447 | None:intergenic | 55.0% | |
| AATTACATCCAGTGGCCGGC+GGG | - | chr8_4:27991001-27991020 | Msa1321790:intron | 55.0% | |
| ATCTCGACCAAGTGGCTGGA+CGG | - | chr8_4:27991024-27991043 | Msa1321790:intron | 55.0% | |
| CTAGAATCCGTCCAGCCACT+TGG | + | chr8_4:27991034-27991053 | None:intergenic | 55.0% | |
| TACGTCAGTGACGACAGCCG+CGG | - | chr8_4:27985917-27985936 | Msa1321790:intron | 60.0% | |
| GAGGGCGACTTCCATTCCTC+TGG | + | chr8_4:27990070-27990089 | None:intergenic | 60.0% | |
| CCCCGTGAGCATAGCTCAGT+TGG | - | chr8_4:27990425-27990444 | Msa1321790:intron | 60.0% | |
| CCACTTGGTCGAGATCCCGC+CGG | + | chr8_4:27991019-27991038 | None:intergenic | 65.0% | |
| CGGGATCTCGACCAAGTGGC+TGG | - | chr8_4:27991020-27991039 | Msa1321790:intron | 65.0% | |
| GTCAGTGACGACAGCCGCGG+TGG | - | chr8_4:27985920-27985939 | Msa1321790:intron | 70.0% | |
| CCGGCGGGATCTCGACCAAG+TGG | - | chr8_4:27991016-27991035 | Msa1321790:intron | 70.0% | |
| GTCGAGATCCCGCCGGCCAC+TGG | + | chr8_4:27991012-27991031 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 27980865 | 27991351 | 27980865 | ID=Msa1321790;Name=Msa1321790 |
| chr8_4 | mRNA | 27980865 | 27991351 | 27980865 | ID=Msa1321790-mRNA-1;Parent=Msa1321790;Name=Msa1321790-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.5|0.4|0.6|0.75|0.6|5|287|119 |
| chr8_4 | exon | 27980865 | 27981224 | 27980865 | ID=Msa1321790-mRNA-1:exon:9433;Parent=Msa1321790-mRNA-1 |
| chr8_4 | exon | 27982039 | 27982222 | 27982039 | ID=Msa1321790-mRNA-1:exon:9432;Parent=Msa1321790-mRNA-1 |
| chr8_4 | exon | 27982345 | 27982435 | 27982345 | ID=Msa1321790-mRNA-1:exon:9431;Parent=Msa1321790-mRNA-1 |
| chr8_4 | exon | 27990883 | 27990888 | 27990883 | ID=Msa1321790-mRNA-1:exon:9430;Parent=Msa1321790-mRNA-1 |
| chr8_4 | exon | 27991346 | 27991351 | 27991346 | ID=Msa1321790-mRNA-1:exon:9429;Parent=Msa1321790-mRNA-1 |
| chr8_4 | CDS | 27991346 | 27991351 | 27991346 | ID=Msa1321790-mRNA-1:cds;Parent=Msa1321790-mRNA-1 |
| chr8_4 | CDS | 27990883 | 27990888 | 27990883 | ID=Msa1321790-mRNA-1:cds;Parent=Msa1321790-mRNA-1 |
| chr8_4 | CDS | 27982345 | 27982435 | 27982345 | ID=Msa1321790-mRNA-1:cds;Parent=Msa1321790-mRNA-1 |
| chr8_4 | CDS | 27982039 | 27982222 | 27982039 | ID=Msa1321790-mRNA-1:cds;Parent=Msa1321790-mRNA-1 |
| chr8_4 | CDS | 27981152 | 27981224 | 27981152 | ID=Msa1321790-mRNA-1:cds;Parent=Msa1321790-mRNA-1 |
| chr8_4 | three_prime_UTR | 27980865 | 27981151 | 27980865 | ID=Msa1321790-mRNA-1:three_prime_utr;Parent=Msa1321790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
