AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0771660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771660 MtrunA17_Chr5g0425571 99.482 386 2 0 1 386 1 386 0.0 802
Msa0771660 MtrunA17_Chr4g0050511 68.312 385 120 1 1 385 1 383 0.0 592
Msa0771660 MtrunA17_Chr3g0120271 36.148 379 199 5 8 378 7 350 1.82e-76 240
Msa0771660 MtrunA17_Chr4g0041801 32.683 205 97 9 202 384 290 475 1.34e-19 90.1
Msa0771660 MtrunA17_Chr4g0041801 38.318 107 65 1 6 111 5 111 7.29e-16 79.0
Msa0771660 MtrunA17_Chr2g0319621 28.839 267 148 10 138 384 178 422 1.96e-18 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0771660 AT1G36050.2 81.865 386 70 0 1 386 1 386 0.0 697
Msa0771660 AT1G36050.1 81.675 382 70 0 1 382 1 382 0.0 689
Msa0771660 AT1G22200.1 77.979 386 85 0 1 386 1 386 0.0 656
Msa0771660 AT1G22200.2 77.015 335 77 0 1 335 1 335 0.0 565
Msa0771660 AT3G22290.2 36.031 383 202 10 4 379 3 349 4.87e-75 237
Msa0771660 AT3G22290.1 36.031 383 202 10 4 379 3 349 4.87e-75 237
Msa0771660 AT4G27080.1 31.841 201 104 7 202 384 293 478 2.00e-21 96.3
Msa0771660 AT4G27080.1 37.963 108 66 1 6 112 5 112 5.93e-16 79.7
Msa0771660 AT4G27080.2 31.841 201 104 7 202 384 345 530 3.42e-21 95.5
Msa0771660 AT4G27080.2 38.614 101 61 1 13 112 64 164 1.04e-13 72.8
Msa0771660 AT3G20560.1 30.693 202 108 7 202 384 293 481 5.19e-18 85.9
Msa0771660 AT3G20560.1 40.187 107 63 1 7 112 6 112 1.84e-17 84.3
Msa0771660 AT1G50950.1 26.690 281 167 9 124 384 221 482 6.78e-17 82.4
Msa0771660 AT1G50950.1 39.815 108 64 1 6 112 5 112 1.42e-16 81.6
Msa0771660 AT1G50950.2 26.690 281 167 9 124 384 226 487 6.81e-17 82.4
Msa0771660 AT1G50950.2 39.815 108 64 1 6 112 5 112 1.51e-16 81.6

Find 111 sgRNAs with CRISPR-Local

Find 799 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATAGTCGCACTCTTTC+TGG 0.133582 5_2:-44802117 Msa0771660:CDS
AGCAAATCTCAAACAAAATT+TGG 0.156381 5_2:-44802312 Msa0771660:five_prime_UTR
CTACGACCTTTCTCCAATTA+AGG 0.195998 5_2:-44792390 Msa0771660:intron
TCATAATCATAATCAAAATT+AGG 0.222925 5_2:-44802223 Msa0771660:five_prime_UTR
ATTACGAAGCTTGTTCATTA+TGG 0.253518 5_2:+44802170 None:intergenic
TCTTCTTCTTGATAGCCTTT+TGG 0.307819 5_2:+44791363 None:intergenic
GCTGTTGTTGGAGTACTTTC+CGG 0.321260 5_2:-44791292 Msa0771660:three_prime_UTR
GGCCGATTGCAGTCCCTCCC+TGG 0.324323 5_2:-44792425 Msa0771660:CDS
ATCTTCGATTTCGATCTTCA+TGG 0.330132 5_2:-44802196 Msa0771660:exon
CATTTGTATACCTCCAACTA+TGG 0.339863 5_2:+44791549 None:intergenic
AGCACATACCTTGCTGTTGT+TGG 0.341824 5_2:-44791304 Msa0771660:three_prime_UTR
TCTCTGTGACAGAACACTTT+AGG 0.345410 5_2:-44792460 Msa0771660:CDS
GAACGGGGCGTTTCGCGATT+TGG 0.352631 5_2:+44802345 None:intergenic
AAACAAAATTTGGATTGAAC+GGG 0.358155 5_2:-44802302 Msa0771660:five_prime_UTR
GCATCAAAAGGAAATGTTAT+AGG 0.366234 5_2:-44790979 Msa0771660:three_prime_UTR
TACCGCCTCAGCACCATAAC+AGG 0.379587 5_2:+44800061 None:intergenic
TTGAGATTTGCTCTATCAAC+TGG 0.383095 5_2:+44802323 None:intergenic
CTAGATTCATTTATCTATCA+TGG 0.385708 5_2:-44791386 Msa0771660:CDS
TTTGCTCTATCAACTGGAAC+GGG 0.387685 5_2:+44802329 None:intergenic
GCCGATTGCAGTCCCTCCCT+GGG 0.388413 5_2:-44792424 Msa0771660:CDS
TTCACTGATGACAAGATCTA+AGG 0.405842 5_2:+44791168 None:intergenic
GGGAAAAGCTTTCAGCAATC+TGG 0.414672 5_2:-44797789 Msa0771660:CDS
CCCCAGGGAGGGACTGCAAT+CGG 0.422047 5_2:+44792423 None:intergenic
CAAACCTGGTCAATTGAATC+CGG 0.433588 5_2:+44798761 None:intergenic
GATCAATAACCTGGTTTGAC+TGG 0.437886 5_2:+44792558 None:intergenic
ACTTATTGCGGATCCTGTTA+TGG 0.450203 5_2:-44800074 Msa0771660:CDS
TTGGAAGTAAACAAGGTGGC+AGG 0.459413 5_2:-44797831 Msa0771660:CDS
CGTACATGTGCATGACCTGC+TGG 0.468545 5_2:-44797766 Msa0771660:CDS
CTGCCTCCATGTCTTTGCAA+GGG 0.472630 5_2:+44800113 None:intergenic
GAAAAGCAAGAGCATGAGAA+TGG 0.476070 5_2:+44802071 None:intergenic
CACATCAACAGAATAGCCTT+TGG 0.482453 5_2:-44795366 Msa0771660:CDS
TCTCTTCTTGAAGCATCAAA+AGG 0.483436 5_2:-44790991 Msa0771660:three_prime_UTR
CCTGCCTCCATGTCTTTGCA+AGG 0.483999 5_2:+44800112 None:intergenic
CATTAGCGGAGAACAACATC+TGG 0.491394 5_2:-44800727 Msa0771660:CDS
GAAAGAGAAATTACGAAGCT+CGG 0.495749 5_2:+44802044 None:intergenic
GAAAGAATCAAGGAAGAAGA+AGG 0.501222 5_2:-44797879 Msa0771660:CDS
CAAACAAAATTTGGATTGAA+CGG 0.501951 5_2:-44802303 Msa0771660:five_prime_UTR
AAGCATATCGAAAGAAAGGT+TGG 0.504184 5_2:-44798796 Msa0771660:CDS
TTCAGAAAAGATGTGAATCA+TGG 0.504541 5_2:+44791101 None:intergenic
CGTGAAGCATATCGAAAGAA+AGG 0.504663 5_2:-44798800 Msa0771660:CDS
GAAACAAGGCAAGATGGAAT+CGG 0.513498 5_2:-44800537 Msa0771660:CDS
ATTTATCTATCATGGCCAAA+AGG 0.514131 5_2:-44791378 Msa0771660:CDS
TTGGAGTACTTTCCGGTGAG+TGG 0.524122 5_2:-44791285 Msa0771660:three_prime_UTR
GTGTTATCAGTTTCAATGCA+AGG 0.529183 5_2:-44791197 Msa0771660:three_prime_UTR
GTGATAGAAACAAGGCAAGA+TGG 0.530527 5_2:-44800543 Msa0771660:CDS
ACCAATGTGTGTGCCATAGT+TGG 0.531594 5_2:-44791562 Msa0771660:CDS
TCTTGATTATCAGTGTGCAT+TGG 0.532026 5_2:-44795222 Msa0771660:intron
TCGCGATTTGGTTGAAGCAG+AGG 0.534851 5_2:+44802357 None:intergenic
AAAACACCTTAATTGGAGAA+AGG 0.535317 5_2:+44792384 None:intergenic
AAAGGCTATCAAGAAGAAGA+TGG 0.538983 5_2:-44791360 Msa0771660:CDS
TTGTTCTCCGCTAATGTCCA+TGG 0.540332 5_2:+44800734 None:intergenic
CTCGATGCCATGGACATTAG+CGG 0.540952 5_2:-44800741 Msa0771660:CDS
GTCAAGAGGGTTTACAACAC+CGG 0.543744 5_2:+44795332 None:intergenic
GTCTCTCGAGAGCCACTCAC+CGG 0.544442 5_2:+44791273 None:intergenic
CTCACGTCAGTGTACATAGT+TGG 0.544532 5_2:+44792593 None:intergenic
ATCACTTAGTGCAAAAGAGA+AGG 0.545278 5_2:-44797909 Msa0771660:intron
AGTATAGAACATGCTAGTGC+AGG 0.546585 5_2:+44800768 None:intergenic
TCCAACTATGGCACACACAT+TGG 0.549757 5_2:+44791561 None:intergenic
AGGGTTCTTAGAAAGAATCA+AGG 0.554292 5_2:-44797889 Msa0771660:CDS
AAAATACTGATACATCCCAC+TGG 0.555074 5_2:+44795186 None:intergenic
AGCATATCGAAAGAAAGGTT+GGG 0.557532 5_2:-44798795 Msa0771660:CDS
CCTTGCAAAGACATGGAGGC+AGG 0.557759 5_2:-44800112 Msa0771660:CDS
AGGCTATTCTGTTGATGTGG+TGG 0.558845 5_2:+44795370 None:intergenic
TATACTTAGTCTCGATGCCA+TGG 0.561660 5_2:-44800751 Msa0771660:CDS
GGTGAAGGATGCAATGTGTA+TGG 0.569301 5_2:-44797858 Msa0771660:CDS
TAATGAATGAAATTTCCTGT+GGG 0.570748 5_2:-44791227 Msa0771660:three_prime_UTR
AAGAAAAGAATAGACTCTCA+TGG 0.572185 5_2:-44800570 Msa0771660:CDS
GTGTTGTAAACCCTCTTGAC+CGG 0.574958 5_2:-44795329 Msa0771660:intron
AGGTTGGGCACTCTCAAGCC+CGG 0.575134 5_2:-44798780 Msa0771660:CDS
AAACCTGGTCAATTGAATCC+GGG 0.575289 5_2:+44798762 None:intergenic
AAGCCCGGATTCAATTGACC+AGG 0.575812 5_2:-44798765 Msa0771660:intron
ATCAAGGAAGAAGAAGGTGA+AGG 0.577027 5_2:-44797873 Msa0771660:CDS
CAAAGGCTATTCTGTTGATG+TGG 0.582521 5_2:+44795367 None:intergenic
TGCATTGAAACTGATAACAC+AGG 0.584080 5_2:+44791200 None:intergenic
TAAAGAGCTCACCGGTCAAG+AGG 0.585229 5_2:+44795318 None:intergenic
TCAAGAGGGTTTACAACACC+GGG 0.589163 5_2:+44795333 None:intergenic
TGCTTCACGAACTTCCTCAC+AGG 0.590612 5_2:+44798814 None:intergenic
TCACTTAGTGCAAAAGAGAA+GGG 0.593153 5_2:-44797908 Msa0771660:intron
TGGAAGTAAACAAGGTGGCA+GGG 0.593479 5_2:-44797830 Msa0771660:CDS
ATCAAGAAGAAGATGGAACT+CGG 0.594892 5_2:-44791353 Msa0771660:CDS
TTTGCGCTTGCAGTCAGATG+AGG 0.596325 5_2:-44798849 Msa0771660:intron
CACTTTAGGACGGCAGATGT+AGG 0.596476 5_2:-44792446 Msa0771660:CDS
CTTGTTGTAGATACTTCTAG+AGG 0.598128 5_2:-44801908 Msa0771660:CDS
CTAATGAATGAAATTTCCTG+TGG 0.600881 5_2:-44791228 Msa0771660:three_prime_UTR
GAGCACAATGAGACTTATTG+CGG 0.606344 5_2:-44800086 Msa0771660:CDS
CTATGTACACTGACGTGAGT+GGG 0.606656 5_2:-44792589 Msa0771660:CDS
ATTTGCTCTATCAACTGGAA+CGG 0.609514 5_2:+44802328 None:intergenic
AAAGAGCTCACCGGTCAAGA+GGG 0.621153 5_2:+44795319 None:intergenic
ATCCTGTTATGGTGCTGAGG+CGG 0.626803 5_2:-44800063 Msa0771660:intron
GATAACACAGGGAACCCCAC+AGG 0.627469 5_2:+44791212 None:intergenic
AAGAGAGATCAACAAGTGCA+TGG 0.629135 5_2:+44791008 None:intergenic
TATAGTCGCACTCTTTCTGG+CGG 0.635746 5_2:-44802114 Msa0771660:CDS
GAACACTATCCAGTCAAACC+AGG 0.636074 5_2:-44792567 Msa0771660:intron
AGATGTGAATCATGGCAAAG+TGG 0.638800 5_2:+44791109 None:intergenic
ACCGGGAAAATAGTCTCCAA+AGG 0.641478 5_2:+44795350 None:intergenic
CGGATCCTGTTATGGTGCTG+AGG 0.643851 5_2:-44800066 Msa0771660:CDS
AATGAATGAAATTTCCTGTG+GGG 0.656178 5_2:-44791226 Msa0771660:three_prime_UTR
AACAAAATTTGGATTGAACG+GGG 0.658205 5_2:-44802301 Msa0771660:five_prime_UTR
AAATACTGATACATCCCACT+GGG 0.661329 5_2:+44795187 None:intergenic
TGTGACAGAACACTTTAGGA+CGG 0.663702 5_2:-44792456 Msa0771660:CDS
ACTATGTACACTGACGTGAG+TGG 0.665706 5_2:-44792590 Msa0771660:CDS
AAAGTACTCCAACAACAGCA+AGG 0.667437 5_2:+44791296 None:intergenic
CCGATTGCAGTCCCTCCCTG+GGG 0.667693 5_2:-44792423 Msa0771660:CDS
AATGTGTGTGCCATAGTTGG+AGG 0.674458 5_2:-44791559 Msa0771660:intron
TTGCTCTATCAACTGGAACG+GGG 0.676838 5_2:+44802330 None:intergenic
ATGGCAATGTGATAGAAACA+AGG 0.687509 5_2:-44800551 Msa0771660:CDS
AAACCCTTGCAAAGACATGG+AGG 0.692409 5_2:-44800116 Msa0771660:CDS
GGACACAAGAAACACCCAGT+GGG 0.693082 5_2:-44795201 Msa0771660:CDS
GCATTGAAACTGATAACACA+GGG 0.696655 5_2:+44791201 None:intergenic
TGGACACAAGAAACACCCAG+TGG 0.786125 5_2:-44795202 Msa0771660:CDS
GGAATGTTGTAATTCCTGTG+AGG 0.801380 5_2:-44798828 Msa0771660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATAATTTTAATTTT+AGG + chr5_2:44801123-44801142 None:intergenic 0.0%
!!! AATGCATTTTTATTTTATAT+CGG - chr5_2:44792864-44792883 Msa0771660:intron 10.0%
!!! TTTTTTTTTTTTTTGTACAA+TGG + chr5_2:44794048-44794067 None:intergenic 10.0%
!! AATTCATAATAGTTTAATAT+AGG + chr5_2:44794195-44794214 None:intergenic 10.0%
!!! TTATAATTTTTTCTATTTAG+TGG - chr5_2:44794255-44794274 Msa0771660:intron 10.0%
!!! TATAATTTTTTCTATTTAGT+GGG - chr5_2:44794256-44794275 Msa0771660:intron 10.0%
!! TGTTCAAAAAAAAAAAAAAT+AGG + chr5_2:44794883-44794902 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGAAGA+AGG - chr5_2:44794917-44794936 Msa0771660:intron 10.0%
!!! ACTAATTTGTTAAATATAAT+TGG - chr5_2:44795304-44795323 Msa0771660:intron 10.0%
!!! TAATTCTTTATTTTTCAAAA+TGG - chr5_2:44798918-44798937 Msa0771660:intron 10.0%
!!! AATTCTTTATTTTTCAAAAT+GGG - chr5_2:44798919-44798938 Msa0771660:intron 10.0%
!! AATACTATACATTTAATTAA+TGG - chr5_2:44800160-44800179 Msa0771660:intron 10.0%
!!! TACTTTTCATTTTTAAATTA+CGG - chr5_2:44800286-44800305 Msa0771660:intron 10.0%
!! TCATAATCATAATCAAAATT+AGG - chr5_2:44791098-44791117 Msa0771660:three_prime_UTR 15.0%
!!! TTTTTTTTTGTTACTGTTTT+AGG - chr5_2:44791359-44791378 Msa0771660:CDS 15.0%
!!! TTTTTTTTGTTACTGTTTTA+GGG - chr5_2:44791360-44791379 Msa0771660:CDS 15.0%
!!! TGTTCAAATTTTTATATTGT+TGG - chr5_2:44791464-44791483 Msa0771660:intron 15.0%
!! ATAAGTTAATTATTCAAACA+AGG + chr5_2:44791613-44791632 None:intergenic 15.0%
!! TGTTTGAATAATTAACTTAT+TGG - chr5_2:44791613-44791632 Msa0771660:intron 15.0%
!!! TATTTTATCTTCTCTTATAA+AGG + chr5_2:44792281-44792300 None:intergenic 15.0%
!! TATAAGAGAAGATAAAATAA+AGG - chr5_2:44792282-44792301 Msa0771660:intron 15.0%
!! TTATAATTATAATAGCTAGA+AGG + chr5_2:44793499-44793518 None:intergenic 15.0%
!!! TAATACATGATACAATTTTA+TGG - chr5_2:44793605-44793624 Msa0771660:intron 15.0%
!! CAGTTTATTTATATTTATGT+AGG + chr5_2:44794094-44794113 None:intergenic 15.0%
!! TTATGTAGTAACATAATAAA+AGG + chr5_2:44794949-44794968 None:intergenic 15.0%
!! TAATAAAAATGCTACTATAA+AGG + chr5_2:44795084-44795103 None:intergenic 15.0%
!! CTATTTGTAATGAATAATTA+TGG - chr5_2:44795158-44795177 Msa0771660:intron 15.0%
!!! GTTATTTGTTTCTATTAAAT+TGG - chr5_2:44796048-44796067 Msa0771660:intron 15.0%
!! TTCAAAATTTAGTGTATATA+TGG - chr5_2:44798220-44798239 Msa0771660:intron 15.0%
!!! TAATTGTTTTCATTAAAATC+AGG - chr5_2:44798771-44798790 Msa0771660:CDS 15.0%
!!! AATTGTTTTCATTAAAATCA+GGG - chr5_2:44798772-44798791 Msa0771660:CDS 15.0%
!!! TACTGATTATTATTTTGATT+TGG + chr5_2:44799198-44799217 None:intergenic 15.0%
!!! AATAAAAAGTGAAAATGTTT+TGG - chr5_2:44800834-44800853 Msa0771660:intron 15.0%
!! GCTAATATAATATTGTTAAT+AGG - chr5_2:44801168-44801187 Msa0771660:intron 15.0%
!! AAAATATGACTTAATTACAA+AGG - chr5_2:44801201-44801220 Msa0771660:intron 15.0%
!!! TTGAGAATAACATTTTATTA+TGG + chr5_2:44801244-44801263 None:intergenic 15.0%
!!! TTTCTAAAGTTGTTAATAAA+TGG - chr5_2:44801356-44801375 Msa0771660:intron 15.0%
!!! TTCTAAAGTTGTTAATAAAT+GGG - chr5_2:44801357-44801376 Msa0771660:intron 15.0%
!!! AACTGATTTAGAATTATTTT+TGG + chr5_2:44801640-44801659 None:intergenic 15.0%
!! AATGCATTAGAATAAAATGA+TGG + chr5_2:44791312-44791331 None:intergenic 20.0%
!! AGATTTGAAAATTAATGAGT+TGG - chr5_2:44791999-44792018 Msa0771660:intron 20.0%
!! GAAGATAAAATAAAGGTAAA+TGG - chr5_2:44792289-44792308 Msa0771660:intron 20.0%
!! AAATAAGGTGAAAACAATTT+AGG - chr5_2:44792364-44792383 Msa0771660:intron 20.0%
!! GTATGTATAATAGAAAAACT+CGG - chr5_2:44792622-44792641 Msa0771660:intron 20.0%
!!! AGTAAGAATCTTTTCATTTT+TGG - chr5_2:44792911-44792930 Msa0771660:intron 20.0%
!! GTTTGTGAAAACTAAATAAA+AGG + chr5_2:44792959-44792978 None:intergenic 20.0%
!!! TTATTTAGTTTTCACAAACT+TGG - chr5_2:44792960-44792979 Msa0771660:intron 20.0%
!!! TTAAAAGACATTTTCTCTTT+AGG - chr5_2:44792997-44793016 Msa0771660:intron 20.0%
!! ATATCAACTAATAAGAAATC+TGG - chr5_2:44793375-44793394 Msa0771660:intron 20.0%
!! TTATGAAAACTTATTTGAGT+TGG - chr5_2:44793420-44793439 Msa0771660:intron 20.0%
!! AACCTATTATGAGATATTTA+TGG - chr5_2:44793560-44793579 Msa0771660:intron 20.0%
!! ATGTATTAAAAATCCAAACT+AGG + chr5_2:44793593-44793612 None:intergenic 20.0%
!! ATTTATATTTATGTAGGTCT+AGG + chr5_2:44794088-44794107 None:intergenic 20.0%
!! ATAAACTGTTATGACTTATT+TGG - chr5_2:44794106-44794125 Msa0771660:intron 20.0%
!! TAAACTGTTATGACTTATTT+GGG - chr5_2:44794107-44794126 Msa0771660:intron 20.0%
!!! AAAAGTCTTTTTTTTGTACT+CGG + chr5_2:44794134-44794153 None:intergenic 20.0%
!!! TACAAAAAAAAGACTTTTGT+GGG - chr5_2:44794136-44794155 Msa0771660:intron 20.0%
!!! AAAATGTTTTTTATAGGTCT+AGG + chr5_2:44794162-44794181 None:intergenic 20.0%
!!! TAGACCTATAAAAAACATTT+TGG - chr5_2:44794161-44794180 Msa0771660:intron 20.0%
!!! GTAACCAAAATGTTTTTTAT+AGG + chr5_2:44794168-44794187 None:intergenic 20.0%
!! ATCGTTGACAAATATATTAT+GGG - chr5_2:44794637-44794656 Msa0771660:intron 20.0%
!! TACAAACTAATGATTGTTTA+CGG + chr5_2:44795130-44795149 None:intergenic 20.0%
!! TACAATATGAATAAAACAGA+TGG + chr5_2:44795973-44795992 None:intergenic 20.0%
!!! GTTTTATTCATATTGTATAG+AGG - chr5_2:44795976-44795995 Msa0771660:intron 20.0%
!!! CTTCATAAGTATTCAATTTT+AGG - chr5_2:44796652-44796671 Msa0771660:intron 20.0%
!! TAATTTGGGAAAAATGAAAA+GGG - chr5_2:44797002-44797021 Msa0771660:intron 20.0%
!! AAAGTGAGGAATATAAAATA+TGG - chr5_2:44797179-44797198 Msa0771660:intron 20.0%
!!! GAAATTATAACAAAAAGTAC+AGG - chr5_2:44797516-44797535 Msa0771660:intron 20.0%
!!! GATGTATCAGTATTTTATAA+AGG - chr5_2:44798142-44798161 Msa0771660:intron 20.0%
!!! AACTTTGTTATTGCTTATAT+TGG - chr5_2:44798301-44798320 Msa0771660:intron 20.0%
!! GAAAACAATTAAATCTTTGA+CGG + chr5_2:44798762-44798781 None:intergenic 20.0%
!! GGAGATAGAATTTAATAATT+GGG + chr5_2:44799297-44799316 None:intergenic 20.0%
!! AGGAGATAGAATTTAATAAT+TGG + chr5_2:44799298-44799317 None:intergenic 20.0%
!! AACAATCGAAAAAATGAAAA+TGG + chr5_2:44799626-44799645 None:intergenic 20.0%
!! TTGATAAAAGGAAAAAACAT+GGG + chr5_2:44799792-44799811 None:intergenic 20.0%
!! ATTGATAAAAGGAAAAAACA+TGG + chr5_2:44799793-44799812 None:intergenic 20.0%
!! TTTAAAAATACATACAGCTA+GGG + chr5_2:44800000-44800019 None:intergenic 20.0%
!!! TTTTAAAAATACATACAGCT+AGG + chr5_2:44800001-44800020 None:intergenic 20.0%
!!! AAAACATACTATAGTTTTAC+TGG + chr5_2:44800658-44800677 None:intergenic 20.0%
!! AATAAGAAAAACACCTTAAT+TGG + chr5_2:44800947-44800966 None:intergenic 20.0%
!!! AACATTTTATTATGGTAGTT+TGG + chr5_2:44801236-44801255 None:intergenic 20.0%
! AGCAAATCTCAAACAAAATT+TGG - chr5_2:44791009-44791028 Msa0771660:three_prime_UTR 25.0%
! CAAACAAAATTTGGATTGAA+CGG - chr5_2:44791018-44791037 Msa0771660:three_prime_UTR 25.0%
! AAACAAAATTTGGATTGAAC+GGG - chr5_2:44791019-44791038 Msa0771660:three_prime_UTR 25.0%
!!! TAGAAATCTTCGTTGATTTT+AGG + chr5_2:44791189-44791208 None:intergenic 25.0%
! ATTGTGAATTTGTGATGTTA+TGG - chr5_2:44791521-44791540 Msa0771660:intron 25.0%
!! GAACTATAGATTTTGTAGTA+AGG - chr5_2:44791896-44791915 Msa0771660:intron 25.0%
!!! GCTTTTTTCATTAGATATCT+TGG - chr5_2:44792129-44792148 Msa0771660:intron 25.0%
!!! TAAGTTTTGTCAGACTTTTT+GGG + chr5_2:44792220-44792239 None:intergenic 25.0%
!!! ATAAGTTTTGTCAGACTTTT+TGG + chr5_2:44792221-44792240 None:intergenic 25.0%
! TCAAATAAGTAAATCCAAAC+AGG - chr5_2:44792444-44792463 Msa0771660:CDS 25.0%
! TTTCAACATCAAAACAACAA+TGG + chr5_2:44792512-44792531 None:intergenic 25.0%
!! TTTGGTTTCTATATATCACA+TGG - chr5_2:44792929-44792948 Msa0771660:intron 25.0%
!!! GGAAGTGATTTTTTTATCAA+TGG - chr5_2:44793018-44793037 Msa0771660:intron 25.0%
! ATATAACATCCTTATCCTTA+TGG + chr5_2:44793288-44793307 None:intergenic 25.0%
! AAATGTTCATAGAAAACTGT+AGG - chr5_2:44793535-44793554 Msa0771660:intron 25.0%
! AGCCATAAATATCTCATAAT+AGG + chr5_2:44793565-44793584 None:intergenic 25.0%
!!! AAAGTCTTTTTTTTGTACTC+GGG + chr5_2:44794133-44794152 None:intergenic 25.0%
!! GTACAAAAAAAAGACTTTTG+TGG - chr5_2:44794135-44794154 Msa0771660:intron 25.0%
! CATCGTTGACAAATATATTA+TGG - chr5_2:44794636-44794655 Msa0771660:intron 25.0%
! GTACTTATAAACTGTATACT+TGG + chr5_2:44794714-44794733 None:intergenic 25.0%
! ATAAAGGAAACAAGATTTGT+CGG + chr5_2:44795068-44795087 None:intergenic 25.0%
!!! ACAATCATTAGTTTGTAATG+TGG - chr5_2:44795133-44795152 Msa0771660:intron 25.0%
! TAAGATTAACTCCTTGTAAA+TGG + chr5_2:44795190-44795209 None:intergenic 25.0%
!! TTACTTGTGTTTTCAAAGAA+TGG - chr5_2:44795230-44795249 Msa0771660:intron 25.0%
! ACCTTCAATTTATATATGCA+TGG - chr5_2:44795273-44795292 Msa0771660:intron 25.0%
! TCCATGCATATATAAATTGA+AGG + chr5_2:44795277-44795296 None:intergenic 25.0%
! ATATACAAGTTATACAGACA+GGG + chr5_2:44795350-44795369 None:intergenic 25.0%
!! ATATGATTTTTGTTCTCAGA+TGG - chr5_2:44795611-44795630 Msa0771660:intron 25.0%
! TAGAATTAATGACAAACAGA+TGG + chr5_2:44796004-44796023 None:intergenic 25.0%
! TACTGGTACTATTAAATGAA+TGG - chr5_2:44796095-44796114 Msa0771660:intron 25.0%
! GTTGAAGAACAAATAATTAC+TGG - chr5_2:44796330-44796349 Msa0771660:intron 25.0%
! TTGTCTGGATATAGAATAAT+TGG - chr5_2:44796833-44796852 Msa0771660:intron 25.0%
! AAAGAGGAAGAAAAGTAATT+TGG - chr5_2:44796987-44797006 Msa0771660:intron 25.0%
! AAGAGGAAGAAAAGTAATTT+GGG - chr5_2:44796988-44797007 Msa0771660:intron 25.0%
! GTAATTTGGGAAAAATGAAA+AGG - chr5_2:44797001-44797020 Msa0771660:intron 25.0%
! ACAGCAAAATAAATTCTCTA+GGG + chr5_2:44797382-44797401 None:intergenic 25.0%
!! ATTATAACAAAAAGTACAGG+TGG - chr5_2:44797519-44797538 Msa0771660:intron 25.0%
!!! GTTTTATTCATCTTGTATAG+AGG - chr5_2:44797745-44797764 Msa0771660:CDS 25.0%
! TCTTAAAATATGATGACTGA+TGG + chr5_2:44797902-44797921 None:intergenic 25.0%
! ACTGATAATCAAGAAAATGT+TGG + chr5_2:44798093-44798112 None:intergenic 25.0%
! AATAACAAAGTTACAAATGG+TGG + chr5_2:44798293-44798312 None:intergenic 25.0%
! AGCAATAACAAAGTTACAAA+TGG + chr5_2:44798296-44798315 None:intergenic 25.0%
! GTTGCATTTGTAACAATTTA+CGG - chr5_2:44798365-44798384 Msa0771660:intron 25.0%
!! CTATTAGTGATGAAACTTTT+TGG - chr5_2:44798462-44798481 Msa0771660:intron 25.0%
! TCTTTCTATATATCCTCTAT+GGG - chr5_2:44798619-44798638 Msa0771660:intron 25.0%
! TACTCAATTATGTTCAATTG+TGG + chr5_2:44798865-44798884 None:intergenic 25.0%
! AAGACTTAATCCCTATTTAT+AGG - chr5_2:44799144-44799163 Msa0771660:intron 25.0%
! AGACTTAATCCCTATTTATA+GGG - chr5_2:44799145-44799164 Msa0771660:intron 25.0%
!!! AAAGAGTATCCCTATAAATA+GGG + chr5_2:44799157-44799176 None:intergenic 25.0%
!!! TTTTGATTTGGTCTTGATTT+AGG + chr5_2:44799186-44799205 None:intergenic 25.0%
!!! TGAGATTTGAGTTTGTTATT+AGG + chr5_2:44799234-44799253 None:intergenic 25.0%
! GTTAGGATATAGAATAAAGA+AGG + chr5_2:44799411-44799430 None:intergenic 25.0%
! AAATGTAAATGTAGTGCTAA+TGG - chr5_2:44799453-44799472 Msa0771660:intron 25.0%
! AATGTAAATGTAGTGCTAAT+GGG - chr5_2:44799454-44799473 Msa0771660:intron 25.0%
!!! ATGGTATCTGTTTTATTTGA+TGG + chr5_2:44799607-44799626 None:intergenic 25.0%
! ACATGTGAGAAATTGATAAA+AGG + chr5_2:44799804-44799823 None:intergenic 25.0%
! TTTATCAATTTCTCACATGT+AGG - chr5_2:44799804-44799823 Msa0771660:intron 25.0%
! GTTGTTGCTAAATGATAATA+GGG + chr5_2:44799914-44799933 None:intergenic 25.0%
! TGTTGTTGCTAAATGATAAT+AGG + chr5_2:44799915-44799934 None:intergenic 25.0%
! ATTATTACAGGCAATATCTT+TGG + chr5_2:44800070-44800089 None:intergenic 25.0%
! TAATTAATGGTTCATCTGTA+AGG - chr5_2:44800173-44800192 Msa0771660:intron 25.0%
! ACATTATAAGATCAATAACC+TGG + chr5_2:44800775-44800794 None:intergenic 25.0%
! TGGAATACTTAAGAAACTTA+TGG + chr5_2:44801301-44801320 None:intergenic 25.0%
!!! TAATAAATGGGCTAGAAAAA+AGG - chr5_2:44801369-44801388 Msa0771660:intron 25.0%
!!! AATAAATGGGCTAGAAAAAA+GGG - chr5_2:44801370-44801389 Msa0771660:intron 25.0%
! CCAATATAATGCAATATCAA+AGG + chr5_2:44801682-44801701 None:intergenic 25.0%
! CCTTTGATATTGCATTATAT+TGG - chr5_2:44801679-44801698 Msa0771660:intron 25.0%
! CTAGATTCATTTATCTATCA+TGG - chr5_2:44801935-44801954 Msa0771660:CDS 25.0%
! TAATGAATGAAATTTCCTGT+GGG - chr5_2:44802094-44802113 Msa0771660:CDS 25.0%
!! TGTGAATGTTACATAGTTTT+TGG - chr5_2:44802265-44802284 Msa0771660:five_prime_UTR 25.0%
!!! ACATAGTTTTTGGAAAGTAA+AGG - chr5_2:44802275-44802294 Msa0771660:five_prime_UTR 25.0%
!!! CATAGTTTTTGGAAAGTAAA+GGG - chr5_2:44802276-44802295 Msa0771660:five_prime_UTR 25.0%
AACAAAATTTGGATTGAACG+GGG - chr5_2:44791020-44791039 Msa0771660:three_prime_UTR 30.0%
! ATTACGAAGCTTGTTCATTA+TGG + chr5_2:44791154-44791173 None:intergenic 30.0%
TCAACTCTCTCTTTCTAATA+TGG + chr5_2:44791811-44791830 None:intergenic 30.0%
ATATTAGAAAGAGAGAGTTG+AGG - chr5_2:44791810-44791829 Msa0771660:intron 30.0%
! GTTTCTCTGATAGTTTTTCT+AGG + chr5_2:44791970-44791989 None:intergenic 30.0%
TTCTATCATACACCATACTT+TGG + chr5_2:44792026-44792045 None:intergenic 30.0%
TGGTGTATGATAGAACATTA+TGG - chr5_2:44792031-44792050 Msa0771660:intron 30.0%
TGTGAAAACAAGCTGAAAAA+AGG - chr5_2:44792158-44792177 Msa0771660:intron 30.0%
GCTTATTTAAGCTTATCTAG+TGG + chr5_2:44792245-44792264 None:intergenic 30.0%
TGTATAATAGAAAAACTCGG+TGG - chr5_2:44792625-44792644 Msa0771660:intron 30.0%
AAGAAAAGAATAGACTCTCA+TGG - chr5_2:44792751-44792770 Msa0771660:intron 30.0%
TAAACCACATTACTTACGTT+GGG + chr5_2:44792814-44792833 None:intergenic 30.0%
CACAACTAGAACGATATTAA+GGG + chr5_2:44793096-44793115 None:intergenic 30.0%
CAGCAATCAATACATAAACA+AGG + chr5_2:44793326-44793345 None:intergenic 30.0%
! TGGATAAACAGCTTTTAACA+AGG - chr5_2:44793440-44793459 Msa0771660:intron 30.0%
TTATGGCTAAATACCTAGTT+TGG - chr5_2:44793577-44793596 Msa0771660:intron 30.0%
TTCTTTCATCTATACAACCT+GGG + chr5_2:44793882-44793901 None:intergenic 30.0%
TTTCTTTCATCTATACAACC+TGG + chr5_2:44793883-44793902 None:intergenic 30.0%
GGTTGTATAGATGAAAGAAA+AGG - chr5_2:44793883-44793902 Msa0771660:intron 30.0%
GTTAGTGGAACATACTTATT+TGG - chr5_2:44794021-44794040 Msa0771660:intron 30.0%
! ATTAAGTTTTTCCCATCACA+TGG + chr5_2:44794374-44794393 None:intergenic 30.0%
AATATGTGCAAAGTTCAAGT+AGG + chr5_2:44794454-44794473 None:intergenic 30.0%
TTGAAAGCCAAAATGTCATA+AGG + chr5_2:44794587-44794606 None:intergenic 30.0%
GTTGACAAATATATTATGGG+TGG - chr5_2:44794640-44794659 Msa0771660:intron 30.0%
ACAAATATATTATGGGTGGA+AGG - chr5_2:44794644-44794663 Msa0771660:intron 30.0%
ATCAAGTAGTATGAGATGTT+GGG + chr5_2:44794809-44794828 None:intergenic 30.0%
ATATGCACAATGTGATCAAA+TGG + chr5_2:44794997-44795016 None:intergenic 30.0%
TAAAGGAAACAAGATTTGTC+GGG + chr5_2:44795067-44795086 None:intergenic 30.0%
!!! TATGGTTTTGTCCATTTACA+AGG - chr5_2:44795176-44795195 Msa0771660:intron 30.0%
GATATACAAGTTATACAGAC+AGG + chr5_2:44795351-44795370 None:intergenic 30.0%
ACATGATAAACTGAAACTGT+TGG + chr5_2:44796030-44796049 None:intergenic 30.0%
CTCTTCCAATCTTCTTATAA+TGG + chr5_2:44796123-44796142 None:intergenic 30.0%
! GGAAGCTTTGATAAGAAATA+TGG - chr5_2:44796175-44796194 Msa0771660:intron 30.0%
! AGCTTTGATAAGAAATATGG+AGG - chr5_2:44796178-44796197 Msa0771660:intron 30.0%
TTTGATAAGAAATATGGAGG+AGG - chr5_2:44796181-44796200 Msa0771660:intron 30.0%
GAAGAACAAATAATTACTGG+TGG - chr5_2:44796333-44796352 Msa0771660:intron 30.0%
AATAAAGTATAGATCCAGAG+AGG - chr5_2:44796361-44796380 Msa0771660:intron 30.0%
! AATACTTATGAAGCGTTTGT+TGG + chr5_2:44796645-44796664 None:intergenic 30.0%
CAAACACAAATAAAAGCCAT+CGG - chr5_2:44796886-44796905 Msa0771660:intron 30.0%
! TACTTTTGTTCTTTGCATGA+CGG + chr5_2:44796918-44796937 None:intergenic 30.0%
TGCAAAGAACAAAAGTAAGA+AGG - chr5_2:44796921-44796940 Msa0771660:intron 30.0%
GCAAAGAACAAAAGTAAGAA+GGG - chr5_2:44796922-44796941 Msa0771660:intron 30.0%
!!! TGACTTGTTTTCTTTTAGGA+GGG + chr5_2:44797041-44797060 None:intergenic 30.0%
!!! TTGACTTGTTTTCTTTTAGG+AGG + chr5_2:44797042-44797061 None:intergenic 30.0%
!!! GGTTTGACTTGTTTTCTTTT+AGG + chr5_2:44797045-44797064 None:intergenic 30.0%
ACTAGACTCTTCTCATTATT+GGG + chr5_2:44797066-44797085 None:intergenic 30.0%
TACTAGACTCTTCTCATTAT+TGG + chr5_2:44797067-44797086 None:intergenic 30.0%
CACAGCAAAATAAATTCTCT+AGG + chr5_2:44797383-44797402 None:intergenic 30.0%
!!! CTAGAGAATTTATTTTGCTG+TGG - chr5_2:44797381-44797400 Msa0771660:intron 30.0%
AATAGAGTGAATGGTTAGAA+GGG - chr5_2:44797487-44797506 Msa0771660:intron 30.0%
AGAGTATGAAAGTAGTTCAA+AGG - chr5_2:44797556-44797575 Msa0771660:intron 30.0%
! TTTACTTTCTTTTTCTCGCA+AGG - chr5_2:44797688-44797707 Msa0771660:intron 30.0%
! TTACTTTCTTTTTCTCGCAA+GGG - chr5_2:44797689-44797708 Msa0771660:intron 30.0%
AACAGTAGAGTAAATGACAA+TGG + chr5_2:44797728-44797747 None:intergenic 30.0%
TAGAATTAATGACAAACCCA+GGG + chr5_2:44797778-44797797 None:intergenic 30.0%
ATAGAATTAATGACAAACCC+AGG + chr5_2:44797779-44797798 None:intergenic 30.0%
AGAATGATCAGTGAAACTAT+TGG + chr5_2:44797804-44797823 None:intergenic 30.0%
CAAGAATATTAAGCAGTACA+CGG + chr5_2:44798184-44798203 None:intergenic 30.0%
TTAATATTCTTGTTCTGCAG+AGG - chr5_2:44798192-44798211 Msa0771660:intron 30.0%
!! CTTATATTGGTGTTAGTGTA+TGG - chr5_2:44798314-44798333 Msa0771660:intron 30.0%
!!! AGTGTATGGCTTTAATTTTG+TGG - chr5_2:44798328-44798347 Msa0771660:intron 30.0%
!!! TATGGCTTTAATTTTGTGGT+CGG - chr5_2:44798332-44798351 Msa0771660:intron 30.0%
ATAAGTCAAAATTACATCCG+TGG - chr5_2:44798400-44798419 Msa0771660:intron 30.0%
!! ATTTTGATCCAGGGATATAT+TGG - chr5_2:44798429-44798448 Msa0771660:intron 30.0%
CTCTTTCTATATATCCTCTA+TGG - chr5_2:44798618-44798637 Msa0771660:intron 30.0%
CTTTCTATATATCCTCTATG+GGG - chr5_2:44798620-44798639 Msa0771660:intron 30.0%
TTTCTATATATCCTCTATGG+GGG - chr5_2:44798621-44798640 Msa0771660:intron 30.0%
TTACACTTTCAGTAGTTCTT+AGG - chr5_2:44798812-44798831 Msa0771660:CDS 30.0%
! CTTTTGCAATCTTCATTCTT+TGG + chr5_2:44798890-44798909 None:intergenic 30.0%
TAAACTCTCACAAATTCAAC+AGG + chr5_2:44799047-44799066 None:intergenic 30.0%
TGTTGAATTTGTGAGAGTTT+AGG - chr5_2:44799046-44799065 Msa0771660:intron 30.0%
TAAGAAGTGAATATTAGCGA+TGG - chr5_2:44799089-44799108 Msa0771660:intron 30.0%
!! GAAAGAGTATCCCTATAAAT+AGG + chr5_2:44799158-44799177 None:intergenic 30.0%
ATTCTATATCCTAACACGTT+AGG - chr5_2:44799416-44799435 Msa0771660:intron 30.0%
TAGCACTACATTTACATTTG+AGG + chr5_2:44799452-44799471 None:intergenic 30.0%
! CTGTCATATGAAGTGTTAAA+AGG + chr5_2:44799667-44799686 None:intergenic 30.0%
AAAACAGTCCATGATATTAG+TGG + chr5_2:44799720-44799739 None:intergenic 30.0%
TGATGTTACATATATTGCAC+AGG + chr5_2:44800633-44800652 None:intergenic 30.0%
TTATAATTACCATAGCCCTT+TGG - chr5_2:44800979-44800998 Msa0771660:intron 30.0%
TATAATTACCATAGCCCTTT+GGG - chr5_2:44800980-44800999 Msa0771660:intron 30.0%
!! TGTTTTGTTGGATGGTTTTA+TGG + chr5_2:44801325-44801344 None:intergenic 30.0%
!!! ACTTGTGAAACTTGTTTTGT+TGG + chr5_2:44801337-44801356 None:intergenic 30.0%
!! ATAAATGGGCTAGAAAAAAG+GGG - chr5_2:44801371-44801390 Msa0771660:intron 30.0%
AGATGTAAACTCGTAAAACT+CGG - chr5_2:44801416-44801435 Msa0771660:intron 30.0%
! ATATTGGAATTGCATTTTGC+AGG - chr5_2:44801695-44801714 Msa0771660:intron 30.0%
!! TTACTTAGTTGGCTTGAATA+TGG - chr5_2:44801824-44801843 Msa0771660:intron 30.0%
ATTTATCTATCATGGCCAAA+AGG - chr5_2:44801943-44801962 Msa0771660:CDS 30.0%
CTAATGAATGAAATTTCCTG+TGG - chr5_2:44802093-44802112 Msa0771660:CDS 30.0%
AATGAATGAAATTTCCTGTG+GGG - chr5_2:44802095-44802114 Msa0771660:CDS 30.0%
TTCAGAAAAGATGTGAATCA+TGG + chr5_2:44802223-44802242 None:intergenic 30.0%
GCATCAAAAGGAAATGTTAT+AGG - chr5_2:44802342-44802361 Msa0771660:five_prime_UTR 30.0%
ATTTGCTCTATCAACTGGAA+CGG + chr5_2:44790996-44791015 None:intergenic 35.0%
! TTGAGATTTGCTCTATCAAC+TGG + chr5_2:44791001-44791020 None:intergenic 35.0%
ATCTTCGATTTCGATCTTCA+TGG - chr5_2:44791125-44791144 Msa0771660:three_prime_UTR 35.0%
GAAAGAGAAATTACGAAGCT+CGG + chr5_2:44791280-44791299 None:intergenic 35.0%
! CTTGTTGTAGATACTTCTAG+AGG - chr5_2:44791413-44791432 Msa0771660:intron 35.0%
! AAGGAGAGTATATCAGATGA+AGG - chr5_2:44791915-44791934 Msa0771660:intron 35.0%
! TAATGAGTTGGACCAAAGTA+TGG - chr5_2:44792011-44792030 Msa0771660:intron 35.0%
! TTATAAAGGCTTGCTTGGAT+TGG + chr5_2:44792267-44792286 None:intergenic 35.0%
! TTCTCTTATAAAGGCTTGCT+TGG + chr5_2:44792272-44792291 None:intergenic 35.0%
TTGGAGAGCTCATGAAAATA+AGG - chr5_2:44792349-44792368 Msa0771660:intron 35.0%
ATCCAAACAGGTCTATAATG+TGG - chr5_2:44792456-44792475 Msa0771660:CDS 35.0%
AACCACATTATAGACCTGTT+TGG + chr5_2:44792461-44792480 None:intergenic 35.0%
ATGGCAATGTGATAGAAACA+AGG - chr5_2:44792770-44792789 Msa0771660:intron 35.0%
CTAAACCACATTACTTACGT+TGG + chr5_2:44792815-44792834 None:intergenic 35.0%
GCACAACTAGAACGATATTA+AGG + chr5_2:44793097-44793116 None:intergenic 35.0%
CTAGAAGGAAGAAATTTGCA+GGG + chr5_2:44793484-44793503 None:intergenic 35.0%
! ATGATACAATTTTATGGCGC+TGG - chr5_2:44793611-44793630 Msa0771660:intron 35.0%
AGAGCATGAAATCACCAAAT+CGG - chr5_2:44793757-44793776 Msa0771660:intron 35.0%
AAAAAGCAGATCCTGTCATT+CGG + chr5_2:44793919-44793938 None:intergenic 35.0%
!!! TTTTTTGTTGTTTCCTGCTG+CGG - chr5_2:44793934-44793953 Msa0771660:intron 35.0%
TTATGTTGAAGGAGAAGACT+AGG - chr5_2:44793988-44794007 Msa0771660:intron 35.0%
GTAGATCGTACAATGTAACA+AGG + chr5_2:44794292-44794311 None:intergenic 35.0%
AGATCTCACAAAAGATCGTT+GGG + chr5_2:44794322-44794341 None:intergenic 35.0%
!! GATCTCGATTTTGACAACAA+TGG - chr5_2:44794337-44794356 Msa0771660:intron 35.0%
AACAAGTGATGCAAGGAAAT+AGG + chr5_2:44794426-44794445 None:intergenic 35.0%
AAGCATATCGAAAGAAAGGT+TGG - chr5_2:44794525-44794544 Msa0771660:intron 35.0%
AGCATATCGAAAGAAAGGTT+GGG - chr5_2:44794526-44794545 Msa0771660:intron 35.0%
AAATGTCATAAGGACAAACC+TGG + chr5_2:44794577-44794596 None:intergenic 35.0%
! GGTTTGTCCTTATGACATTT+TGG - chr5_2:44794577-44794596 Msa0771660:intron 35.0%
!!! CCATGATTGCTAGCTTTTAA+CGG + chr5_2:44794757-44794776 None:intergenic 35.0%
CGTTAAAAGCTAGCAATCAT+GGG - chr5_2:44794755-44794774 Msa0771660:intron 35.0%
GTTAAAAGCTAGCAATCATG+GGG - chr5_2:44794756-44794775 Msa0771660:intron 35.0%
TTAAAAGCTAGCAATCATGG+GGG - chr5_2:44794757-44794776 Msa0771660:intron 35.0%
CATCAAGTAGTATGAGATGT+TGG + chr5_2:44794810-44794829 None:intergenic 35.0%
ACATCTCATACTACTTGATG+TGG - chr5_2:44794810-44794829 Msa0771660:intron 35.0%
CATCTCATACTACTTGATGT+GGG - chr5_2:44794811-44794830 Msa0771660:intron 35.0%
ATCACTTAGTGCAAAAGAGA+AGG - chr5_2:44795412-44795431 Msa0771660:intron 35.0%
TCACTTAGTGCAAAAGAGAA+GGG - chr5_2:44795413-44795432 Msa0771660:intron 35.0%
AGGGTTCTTAGAAAGAATCA+AGG - chr5_2:44795432-44795451 Msa0771660:intron 35.0%
GAAAGAATCAAGGAAGAAGA+AGG - chr5_2:44795442-44795461 Msa0771660:intron 35.0%
! ATGCAATGTGTATGGCTTTT+TGG - chr5_2:44795471-44795490 Msa0771660:intron 35.0%
!! TGGCTTTTTGGAAGTAAACA+AGG - chr5_2:44795483-44795502 Msa0771660:intron 35.0%
!! CTTTTTGGAAGTAAACAAGG+TGG - chr5_2:44795486-44795505 Msa0771660:intron 35.0%
AAAGAAGTGAGCAGTTAGTA+TGG - chr5_2:44795724-44795743 Msa0771660:intron 35.0%
AAATGAACTAGTGACCCTTT+GGG - chr5_2:44795764-44795783 Msa0771660:intron 35.0%
AGGTGATTATAAAGGATGTG+AGG - chr5_2:44795811-44795830 Msa0771660:intron 35.0%
GGTGATTATAAAGGATGTGA+GGG - chr5_2:44795812-44795831 Msa0771660:intron 35.0%
GTGATTATAAAGGATGTGAG+GGG - chr5_2:44795813-44795832 Msa0771660:intron 35.0%
TGATTATAAAGGATGTGAGG+GGG - chr5_2:44795814-44795833 Msa0771660:intron 35.0%
TAATAGTACCAGTAACTCCA+AGG + chr5_2:44796089-44796108 None:intergenic 35.0%
TGGAGCCATTATAAGAAGAT+TGG - chr5_2:44796115-44796134 Msa0771660:intron 35.0%
TAAGAAGATTGGAAGAGATG+AGG - chr5_2:44796126-44796145 Msa0771660:intron 35.0%
AAGAAGATTGGAAGAGATGA+GGG - chr5_2:44796127-44796146 Msa0771660:intron 35.0%
AAAACGATACTGCAGAATCA+AGG - chr5_2:44796229-44796248 Msa0771660:intron 35.0%
! CTAGTATCCAACAATTTTGG+TGG + chr5_2:44796430-44796449 None:intergenic 35.0%
! GAGCTAGTATCCAACAATTT+TGG + chr5_2:44796433-44796452 None:intergenic 35.0%
TATGTCATGGACAATCAACA+AGG - chr5_2:44796560-44796579 Msa0771660:intron 35.0%
! AAAGTTTTTGATCATCCTGC+AGG - chr5_2:44796586-44796605 Msa0771660:intron 35.0%
!! ACTTGTTTTCTTTTAGGAGG+GGG + chr5_2:44797039-44797058 None:intergenic 35.0%
!! GACTTGTTTTCTTTTAGGAG+GGG + chr5_2:44797040-44797059 None:intergenic 35.0%
!! ACTCAAGTCTTTAAGATACG+TGG - chr5_2:44797086-44797105 Msa0771660:intron 35.0%
! AGTTCGAAAATGTTTTACCC+AGG - chr5_2:44797113-44797132 Msa0771660:intron 35.0%
! GTTCGAAAATGTTTTACCCA+GGG - chr5_2:44797114-44797133 Msa0771660:intron 35.0%
! TTCGAAAATGTTTTACCCAG+GGG - chr5_2:44797115-44797134 Msa0771660:intron 35.0%
AAAACAAGGTCTGGCATTAA+TGG - chr5_2:44797148-44797167 Msa0771660:intron 35.0%
AAACAAGGTCTGGCATTAAT+GGG - chr5_2:44797149-44797168 Msa0771660:intron 35.0%
TGTGGTAAGAATAGAGTGAA+TGG - chr5_2:44797478-44797497 Msa0771660:intron 35.0%
GAATAGAGTGAATGGTTAGA+AGG - chr5_2:44797486-44797505 Msa0771660:intron 35.0%
AAAGTAGTTCAAAGGAAGTG+AGG - chr5_2:44797564-44797583 Msa0771660:intron 35.0%
! TACTTTCTTTTTCTCGCAAG+GGG - chr5_2:44797690-44797709 Msa0771660:intron 35.0%
AGAATTAATGACAAACCCAG+GGG + chr5_2:44797777-44797796 None:intergenic 35.0%
TCTTGATTATCAGTGTGCAT+TGG - chr5_2:44798099-44798118 Msa0771660:intron 35.0%
AAATACTGATACATCCCACT+GGG + chr5_2:44798137-44798156 None:intergenic 35.0%
AAAATACTGATACATCCCAC+TGG + chr5_2:44798138-44798157 None:intergenic 35.0%
TGGATCAAAATTCATAGCCA+CGG + chr5_2:44798420-44798439 None:intergenic 35.0%
!! TGGCTATGAATTTTGATCCA+GGG - chr5_2:44798420-44798439 Msa0771660:intron 35.0%
AAGTATGACCAATATATCCC+TGG + chr5_2:44798440-44798459 None:intergenic 35.0%
GCTGTTGTGTATAATTGACA+AGG + chr5_2:44798678-44798697 None:intergenic 35.0%
TTAGGATCCTTACTTTGTGT+AGG - chr5_2:44798830-44798849 Msa0771660:CDS 35.0%
ACATTCTCCTACACAAAGTA+AGG + chr5_2:44798840-44798859 None:intergenic 35.0%
AAATTCAACAGGTTTCTGAC+TGG + chr5_2:44799036-44799055 None:intergenic 35.0%
TTGTGAGAGTTTAGGTAAGA+AGG - chr5_2:44799054-44799073 Msa0771660:intron 35.0%
GTTTAGGTAAGAAGGAAGAA+AGG - chr5_2:44799062-44799081 Msa0771660:intron 35.0%
! TCTTTTAAATAGCCCTCGAT+TGG + chr5_2:44799329-44799348 None:intergenic 35.0%
GCAATTGAAATCGTGTAAGA+TGG - chr5_2:44799534-44799553 Msa0771660:intron 35.0%
ATTGAAATCGTGTAAGATGG+TGG - chr5_2:44799537-44799556 Msa0771660:intron 35.0%
CACTTCATATGACAGCTTTA+AGG - chr5_2:44799672-44799691 Msa0771660:intron 35.0%
AAGCAAATAAACCAGACTGA+AGG + chr5_2:44799767-44799786 None:intergenic 35.0%
CAATTTCTCACATGTAGGAT+TGG - chr5_2:44799809-44799828 Msa0771660:intron 35.0%
AAAAACCCTTAGAGTGTGTT+TGG - chr5_2:44800228-44800247 Msa0771660:intron 35.0%
CACAATCTACTATCTACAGA+CGG + chr5_2:44800587-44800606 None:intergenic 35.0%
! ATTGTGTGTGCCTTTTGAAT+TGG - chr5_2:44800601-44800620 Msa0771660:intron 35.0%
! ACCTTGTCAAATTTTACCAC+TGG - chr5_2:44800681-44800700 Msa0771660:intron 35.0%
AATCTGAACAACAACCCAAA+GGG + chr5_2:44800997-44801016 None:intergenic 35.0%
AAATCTGAACAACAACCCAA+AGG + chr5_2:44800998-44801017 None:intergenic 35.0%
! ACTCTCGAGTTGTAAAACAT+TGG + chr5_2:44801045-44801064 None:intergenic 35.0%
!!! TTGTTGGATGGTTTTATGGA+TGG + chr5_2:44801321-44801340 None:intergenic 35.0%
!!! GTGAAACTTGTTTTGTTGGA+TGG + chr5_2:44801333-44801352 None:intergenic 35.0%
!! AACTCGGTTTCTGGTAAAAT+CGG + chr5_2:44801500-44801519 None:intergenic 35.0%
!! TGTTAACTCTGAGGTAAACT+CGG + chr5_2:44801516-44801535 None:intergenic 35.0%
TTTACCGAGTTTACGTGTTT+AGG + chr5_2:44801550-44801569 None:intergenic 35.0%
CATTTGTATACCTCCAACTA+TGG + chr5_2:44801775-44801794 None:intergenic 35.0%
! CATAGTTGGAGGTATACAAA+TGG - chr5_2:44801773-44801792 Msa0771660:intron 35.0%
AGACAGACTGAAGACAAATA+GGG + chr5_2:44801805-44801824 None:intergenic 35.0%
AAGACAGACTGAAGACAAAT+AGG + chr5_2:44801806-44801825 None:intergenic 35.0%
TTCAGTCTGTCTTACTTAGT+TGG - chr5_2:44801813-44801832 Msa0771660:intron 35.0%
AAATTCCTGTATGCAAAAGC+AGG + chr5_2:44801898-44801917 None:intergenic 35.0%
! ACAGGAATTTTCACTGTTTC+TGG - chr5_2:44801908-44801927 Msa0771660:CDS 35.0%
!! TCTTCTTCTTGATAGCCTTT+TGG + chr5_2:44801961-44801980 None:intergenic 35.0%
AAAGGCTATCAAGAAGAAGA+TGG - chr5_2:44801961-44801980 Msa0771660:intron 35.0%
ATCAAGAAGAAGATGGAACT+CGG - chr5_2:44801968-44801987 Msa0771660:intron 35.0%
GCATTGAAACTGATAACACA+GGG + chr5_2:44802123-44802142 None:intergenic 35.0%
TGCATTGAAACTGATAACAC+AGG + chr5_2:44802124-44802143 None:intergenic 35.0%
GTGTTATCAGTTTCAATGCA+AGG - chr5_2:44802124-44802143 Msa0771660:CDS 35.0%
TTCACTGATGACAAGATCTA+AGG + chr5_2:44802156-44802175 None:intergenic 35.0%
! TCTCTTCTTGAAGCATCAAA+AGG - chr5_2:44802330-44802349 Msa0771660:five_prime_UTR 35.0%
TTTGCTCTATCAACTGGAAC+GGG + chr5_2:44790995-44791014 None:intergenic 40.0%
TTCTATAGTCGCACTCTTTC+TGG - chr5_2:44791204-44791223 Msa0771660:three_prime_UTR 40.0%
! GAAAAGCAAGAGCATGAGAA+TGG + chr5_2:44791253-44791272 None:intergenic 40.0%
TGCTATAAGCCTAGATCAGA+TGG - chr5_2:44791743-44791762 Msa0771660:intron 40.0%
AGCACCTATAGTAGGAAAGA+TGG - chr5_2:44791834-44791853 Msa0771660:intron 40.0%
ACCTATAGTAGGAAAGATGG+TGG - chr5_2:44791837-44791856 Msa0771660:intron 40.0%
TCCACCATCTTTCCTACTAT+AGG + chr5_2:44791841-44791860 None:intergenic 40.0%
AAGGATAGTTAACTCGCTAG+AGG - chr5_2:44791934-44791953 Msa0771660:intron 40.0%
!! GCTGTTTTCATAAGCTAGCT+TGG - chr5_2:44792330-44792349 Msa0771660:intron 40.0%
GAGCATAAGCACTTGTCAAA+CGG + chr5_2:44792426-44792445 None:intergenic 40.0%
AGTATAGAACATGCTAGTGC+AGG + chr5_2:44792556-44792575 None:intergenic 40.0%
TATACTTAGTCTCGATGCCA+TGG - chr5_2:44792570-44792589 Msa0771660:CDS 40.0%
GTGATAGAAACAAGGCAAGA+TGG - chr5_2:44792778-44792797 Msa0771660:intron 40.0%
GAAACAAGGCAAGATGGAAT+CGG - chr5_2:44792784-44792803 Msa0771660:intron 40.0%
TTCTCCCAACGTAAGTAATG+TGG - chr5_2:44792807-44792826 Msa0771660:intron 40.0%
AGGGAGATACGAAGAAATTC+TGG + chr5_2:44793125-44793144 None:intergenic 40.0%
CATGAATCAAGTGTGAGCAA+GGG + chr5_2:44793144-44793163 None:intergenic 40.0%
GAAAAACCCTTGCAAAGACA+TGG - chr5_2:44793202-44793221 Msa0771660:intron 40.0%
GAGCACAATGAGACTTATTG+CGG - chr5_2:44793235-44793254 Msa0771660:intron 40.0%
ACTTATTGCGGATCCTGTTA+TGG - chr5_2:44793247-44793266 Msa0771660:intron 40.0%
GCTAGAAGGAAGAAATTTGC+AGG + chr5_2:44793485-44793504 None:intergenic 40.0%
GGTTCAAAGTTCGCAGAATA+CGG - chr5_2:44793711-44793730 Msa0771660:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG - chr5_2:44794006-44794025 Msa0771660:intron 40.0%
GATCTCACAAAAGATCGTTG+GGG + chr5_2:44794321-44794340 None:intergenic 40.0%
GAGATCTCACAAAAGATCGT+TGG + chr5_2:44794323-44794342 None:intergenic 40.0%
GGAATGTTGTAATTCCTGTG+AGG - chr5_2:44794493-44794512 Msa0771660:intron 40.0%
CGTGAAGCATATCGAAAGAA+AGG - chr5_2:44794521-44794540 Msa0771660:intron 40.0%
AAACCTGGTCAATTGAATCC+GGG + chr5_2:44794562-44794581 None:intergenic 40.0%
CAAACCTGGTCAATTGAATC+CGG + chr5_2:44794563-44794582 None:intergenic 40.0%
!!! GATTGCTAGCTTTTAACGGA+GGG + chr5_2:44794753-44794772 None:intergenic 40.0%
!!! TGATTGCTAGCTTTTAACGG+AGG + chr5_2:44794754-44794773 None:intergenic 40.0%
CCGTTAAAAGCTAGCAATCA+TGG - chr5_2:44794754-44794773 Msa0771660:intron 40.0%
AAGTAGTATGAGATGTTGGG+TGG + chr5_2:44794806-44794825 None:intergenic 40.0%
ATACTACTTGATGTGGGACT+TGG - chr5_2:44794817-44794836 Msa0771660:intron 40.0%
ATCAAGGAAGAAGAAGGTGA+AGG - chr5_2:44795448-44795467 Msa0771660:intron 40.0%
! GGAATTTCCATTTTGCTCCT+GGG - chr5_2:44795512-44795531 Msa0771660:intron 40.0%
CAAATGAACTAGTGACCCTT+TGG - chr5_2:44795763-44795782 Msa0771660:intron 40.0%
AATGAACTAGTGACCCTTTG+GGG - chr5_2:44795765-44795784 Msa0771660:intron 40.0%
AGGAGGTGAGGTGATTATAA+AGG - chr5_2:44795803-44795822 Msa0771660:intron 40.0%
!! TATGATGGATGAGTGTGAAG+TGG - chr5_2:44795847-44795866 Msa0771660:intron 40.0%
!! ATGATGGATGAGTGTGAAGT+GGG - chr5_2:44795848-44795867 Msa0771660:intron 40.0%
! ACAGACAGAGATTTAGAGCA+AGG - chr5_2:44796254-44796273 Msa0771660:intron 40.0%
! CAGACAGAGATTTAGAGCAA+GGG - chr5_2:44796255-44796274 Msa0771660:intron 40.0%
!! AACAATTTTGGTGGCAGCAA+AGG + chr5_2:44796421-44796440 None:intergenic 40.0%
TTTGCTGCCACCAAAATTGT+TGG - chr5_2:44796420-44796439 Msa0771660:intron 40.0%
AACCAAAATCAGATCCAAGC+TGG - chr5_2:44796489-44796508 Msa0771660:intron 40.0%
TCTGACGATGAAGGTTCTTA+TGG - chr5_2:44796535-44796554 Msa0771660:intron 40.0%
CTGACGATGAAGGTTCTTAT+GGG - chr5_2:44796536-44796555 Msa0771660:intron 40.0%
GGTTCTTATGGGATATGTCA+TGG - chr5_2:44796547-44796566 Msa0771660:intron 40.0%
! TTTTGATCATCCTGCAGGTT+TGG - chr5_2:44796591-44796610 Msa0771660:intron 40.0%
!! ATTTTAGGTCACTGAGAGAG+TGG - chr5_2:44796667-44796686 Msa0771660:intron 40.0%
!! TTTTAGGTCACTGAGAGAGT+GGG - chr5_2:44796668-44796687 Msa0771660:intron 40.0%
!!! TGTTTTGACTGGTACTTCAC+AGG + chr5_2:44796724-44796743 None:intergenic 40.0%
!!! TTTACTGAGGGTGTTTTGAC+TGG + chr5_2:44796735-44796754 None:intergenic 40.0%
ATTGAACCTGCAACTTTGTC+TGG + chr5_2:44796762-44796781 None:intergenic 40.0%
! AACTATAGAGTACTCGAGCT+AGG + chr5_2:44796801-44796820 None:intergenic 40.0%
TCGAGTACTCTATAGTTGTG+AGG - chr5_2:44796804-44796823 Msa0771660:intron 40.0%
ACTCTATAGTTGTGAGGAAC+AGG - chr5_2:44796810-44796829 Msa0771660:intron 40.0%
AAGTAAGAAGGGTAGCAGAT+TGG - chr5_2:44796933-44796952 Msa0771660:intron 40.0%
AGTAAGAAGGGTAGCAGATT+GGG - chr5_2:44796934-44796953 Msa0771660:intron 40.0%
ACTAGGGTAAACAGAGAAAG+AGG - chr5_2:44796971-44796990 Msa0771660:intron 40.0%
AGCACTCAAAAAACAAGGTC+TGG - chr5_2:44797139-44797158 Msa0771660:intron 40.0%
! TAATGGGTCAAGCTAAAGTG+AGG - chr5_2:44797165-44797184 Msa0771660:intron 40.0%
GTTGAATAAGATCCAAGACC+AGG - chr5_2:44797214-44797233 Msa0771660:intron 40.0%
TTATTATTGCAGCTGCAAGG+AGG - chr5_2:44797253-44797272 Msa0771660:intron 40.0%
! AGGGTTGAATGCACTGTTTT+GGG + chr5_2:44797304-44797323 None:intergenic 40.0%
! AAGGGTTGAATGCACTGTTT+TGG + chr5_2:44797305-44797324 None:intergenic 40.0%
AAAACAGTGCATTCAACCCT+TGG - chr5_2:44797304-44797323 Msa0771660:intron 40.0%
AAACAGTGCATTCAACCCTT+GGG - chr5_2:44797305-44797324 Msa0771660:intron 40.0%
AAACAGAAGATCTTCCCCAA+GGG + chr5_2:44797323-44797342 None:intergenic 40.0%
TCTTCTGTTTCATGCTTGCT+TGG - chr5_2:44797333-44797352 Msa0771660:intron 40.0%
! GTCATCATCCTTCAGGTTAT+GGG - chr5_2:44797355-44797374 Msa0771660:intron 40.0%
!! TCCTTTCAAGTTTCACCTTG+AGG - chr5_2:44797409-44797428 Msa0771660:intron 40.0%
TCCTCAAGGTGAAACTTGAA+AGG + chr5_2:44797413-44797432 None:intergenic 40.0%
!! TAGTTGGTGGCGATATTGAT+AGG - chr5_2:44797444-44797463 Msa0771660:intron 40.0%
TGATAGGCACATCAGAAATG+TGG - chr5_2:44797460-44797479 Msa0771660:intron 40.0%
! AAAAAGTACAGGTGGCTCTT+TGG - chr5_2:44797527-44797546 Msa0771660:intron 40.0%
! AAAAGTACAGGTGGCTCTTT+GGG - chr5_2:44797528-44797547 Msa0771660:intron 40.0%
TAGTTCAAAGGAAGTGAGGT+GGG - chr5_2:44797568-44797587 Msa0771660:intron 40.0%
TGTATAGAGGATTAATCCCC+TGG - chr5_2:44797758-44797777 Msa0771660:CDS 40.0%
GTATAGAGGATTAATCCCCT+GGG - chr5_2:44797759-44797778 Msa0771660:CDS 40.0%
CAAAGGCTATTCTGTTGATG+TGG + chr5_2:44797957-44797976 None:intergenic 40.0%
CACATCAACAGAATAGCCTT+TGG - chr5_2:44797955-44797974 Msa0771660:intron 40.0%
TGAGAACATAAAGAGCTCAC+CGG + chr5_2:44798014-44798033 None:intergenic 40.0%
GTTACAAATGCAACTCCCAA+GGG + chr5_2:44798359-44798378 None:intergenic 40.0%
TGTTACAAATGCAACTCCCA+AGG + chr5_2:44798360-44798379 None:intergenic 40.0%
!! GTGGCTATGAATTTTGATCC+AGG - chr5_2:44798419-44798438 Msa0771660:intron 40.0%
TTGCAGTGAAATGAGACAGT+TGG + chr5_2:44798557-44798576 None:intergenic 40.0%
CTGTCTCATTTCACTGCAAT+TGG - chr5_2:44798558-44798577 Msa0771660:intron 40.0%
!! TTTTATAGCCTTAACGTCCC+TGG - chr5_2:44798701-44798720 Msa0771660:intron 40.0%
AAGTGTAACTCGTTGTCACA+CGG + chr5_2:44798800-44798819 None:intergenic 40.0%
TGGTTAATCCAGTGTGAAAG+GGG + chr5_2:44799016-44799035 None:intergenic 40.0%
CTGGTTAATCCAGTGTGAAA+GGG + chr5_2:44799017-44799036 None:intergenic 40.0%
ACTGGTTAATCCAGTGTGAA+AGG + chr5_2:44799018-44799037 None:intergenic 40.0%
GAAGGCAAGAGAAGTTAGTT+AGG + chr5_2:44799393-44799412 None:intergenic 40.0%
!! AAAAGCACTCCTAACGTGTT+AGG + chr5_2:44799428-44799447 None:intergenic 40.0%
AATAAACCAGACTGAAGGAG+TGG + chr5_2:44799762-44799781 None:intergenic 40.0%
! TCTGTAAGGCAAGTGTCTTT+TGG - chr5_2:44800187-44800206 Msa0771660:intron 40.0%
! CTGTAAGGCAAGTGTCTTTT+GGG - chr5_2:44800188-44800207 Msa0771660:intron 40.0%
TCCATCCAAACACACTCTAA+GGG + chr5_2:44800236-44800255 None:intergenic 40.0%
TTAGAGTGTGTTTGGATGGA+GGG - chr5_2:44800236-44800255 Msa0771660:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr5_2:44800455-44800474 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr5_2:44800459-44800478 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr5_2:44800465-44800484 None:intergenic 40.0%
!! CAGGAAAGTGCCAATTCAAA+AGG + chr5_2:44800614-44800633 None:intergenic 40.0%
GCCAGTGGTAAAATTTGACA+AGG + chr5_2:44800685-44800704 None:intergenic 40.0%
GAAAAACAACATGAAGCCAG+TGG + chr5_2:44800700-44800719 None:intergenic 40.0%
!!! CTGGCTTCATGTTGTTTTTC+AGG - chr5_2:44800700-44800719 Msa0771660:intron 40.0%
!!! GCTTCATGTTGTTTTTCAGG+TGG - chr5_2:44800703-44800722 Msa0771660:intron 40.0%
! GATCAATAACCTGGTTTGAC+TGG + chr5_2:44800766-44800785 None:intergenic 40.0%
TCTCTGTGACAGAACACTTT+AGG - chr5_2:44800861-44800880 Msa0771660:intron 40.0%
! TGTGACAGAACACTTTAGGA+CGG - chr5_2:44800865-44800884 Msa0771660:intron 40.0%
CGTAGAAGAAAAAAACCCCA+GGG + chr5_2:44800916-44800935 None:intergenic 40.0%
TCGTAGAAGAAAAAAACCCC+AGG + chr5_2:44800917-44800936 None:intergenic 40.0%
TTCTCGAGTAGAGTTTACCT+AGG + chr5_2:44801086-44801105 None:intergenic 40.0%
CTCGTAAAACTCGGTAAACT+CGG - chr5_2:44801425-44801444 Msa0771660:intron 40.0%
AAACTCGGTAAACTCGGTAA+CGG - chr5_2:44801431-44801450 Msa0771660:intron 40.0%
GAGTTTACCGAGTGTTAACT+CGG - chr5_2:44801456-44801475 Msa0771660:intron 40.0%
AGTTTGACCGAGTTAACACT+CGG + chr5_2:44801466-44801485 None:intergenic 40.0%
CCAAAATCGTGTTAACTCTG+AGG + chr5_2:44801525-44801544 None:intergenic 40.0%
! CCTCAGAGTTAACACGATTT+TGG - chr5_2:44801522-44801541 Msa0771660:intron 40.0%
GGTACCTAAACACGTAAACT+CGG - chr5_2:44801543-44801562 Msa0771660:intron 40.0%
ACACGTAAACTCGGTAAACT+CGG - chr5_2:44801552-44801571 Msa0771660:intron 40.0%
! GAGTGTTAACACTCGATTTG+CGG - chr5_2:44801574-44801593 Msa0771660:intron 40.0%
! AAAGTACTCCAACAACAGCA+AGG + chr5_2:44802028-44802047 None:intergenic 40.0%
AGATGTGAATCATGGCAAAG+TGG + chr5_2:44802215-44802234 None:intergenic 40.0%
AAGAGAGATCAACAAGTGCA+TGG + chr5_2:44802316-44802335 None:intergenic 40.0%
TTGCTCTATCAACTGGAACG+GGG + chr5_2:44790994-44791013 None:intergenic 45.0%
TATAGTCGCACTCTTTCTGG+CGG - chr5_2:44791207-44791226 Msa0771660:three_prime_UTR 45.0%
CGCATTCAACCATCTGATCT+AGG + chr5_2:44791755-44791774 None:intergenic 45.0%
AGATCAGATGGTTGAATGCG+TGG - chr5_2:44791755-44791774 Msa0771660:intron 45.0%
GTTGAGGTAGCACCTATAGT+AGG - chr5_2:44791826-44791845 Msa0771660:intron 45.0%
AGTTAACTCGCTAGAGGTAG+AGG - chr5_2:44791940-44791959 Msa0771660:intron 45.0%
CAAAGTCGTGTCAGCTACAT+GGG + chr5_2:44792067-44792086 None:intergenic 45.0%
ACAAAGTCGTGTCAGCTACA+TGG + chr5_2:44792068-44792087 None:intergenic 45.0%
ATGTAGCTGACACGACTTTG+TGG - chr5_2:44792067-44792086 Msa0771660:intron 45.0%
TGTAGCTGACACGACTTTGT+GGG - chr5_2:44792068-44792087 Msa0771660:intron 45.0%
TGACACGACTTTGTGGGAAA+AGG - chr5_2:44792074-44792093 Msa0771660:intron 45.0%
TTGTTCTCCGCTAATGTCCA+TGG + chr5_2:44792590-44792609 None:intergenic 45.0%
CATTAGCGGAGAACAACATC+TGG - chr5_2:44792594-44792613 Msa0771660:CDS 45.0%
CCATGAATCAAGTGTGAGCA+AGG + chr5_2:44793145-44793164 None:intergenic 45.0%
CCTTGCTCACACTTGATTCA+TGG - chr5_2:44793142-44793161 Msa0771660:intron 45.0%
AAACCCTTGCAAAGACATGG+AGG - chr5_2:44793205-44793224 Msa0771660:intron 45.0%
CAAGGCATGATTAGCAGTCA+AGG - chr5_2:44793458-44793477 Msa0771660:intron 45.0%
AACTTTGAACCGCTCCAACT+TGG + chr5_2:44793702-44793721 None:intergenic 45.0%
TCAAAGTTCGCAGAATACGG+CGG - chr5_2:44793714-44793733 Msa0771660:intron 45.0%
!! TCGCTACAAAGAAGAGCGTT+TGG - chr5_2:44793789-44793808 Msa0771660:intron 45.0%
!! TACAAAGAAGAGCGTTTGGC+CGG - chr5_2:44793793-44793812 Msa0771660:intron 45.0%
! GTTTTGTAGCTCCGAATGAC+AGG - chr5_2:44793905-44793924 Msa0771660:intron 45.0%
CTGGTTGCTTAAAGTTGCAG+AGG - chr5_2:44793957-44793976 Msa0771660:intron 45.0%
GTTGCTTAAAGTTGCAGAGG+CGG - chr5_2:44793960-44793979 Msa0771660:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG - chr5_2:44793994-44794013 Msa0771660:intron 45.0%
!! GATTTTGACAACAATGGCGC+TGG - chr5_2:44794343-44794362 Msa0771660:intron 45.0%
GGCATCAAACAAGTGATGCA+AGG + chr5_2:44794433-44794452 None:intergenic 45.0%
ATAGGGACTTGGGCATTATG+AGG + chr5_2:44794846-44794865 None:intergenic 45.0%
TGAACTGCTGATAGGGACTT+GGG + chr5_2:44794856-44794875 None:intergenic 45.0%
AGGAGTCTGAACTGCTGATA+GGG + chr5_2:44794863-44794882 None:intergenic 45.0%
TAGGAGTCTGAACTGCTGAT+AGG + chr5_2:44794864-44794883 None:intergenic 45.0%
GGTGAAGGATGCAATGTGTA+TGG - chr5_2:44795463-44795482 Msa0771660:intron 45.0%
TTGGAAGTAAACAAGGTGGC+AGG - chr5_2:44795490-44795509 Msa0771660:intron 45.0%
TGGAAGTAAACAAGGTGGCA+GGG - chr5_2:44795491-44795510 Msa0771660:intron 45.0%
! GGGAATTTCCATTTTGCTCC+TGG - chr5_2:44795511-44795530 Msa0771660:intron 45.0%
! AGCTTTTCCCAGGAGCAAAA+TGG + chr5_2:44795522-44795541 None:intergenic 45.0%
! GATTGCTGAAAGCTTTTCCC+AGG + chr5_2:44795532-44795551 None:intergenic 45.0%
GGGAAAAGCTTTCAGCAATC+TGG - chr5_2:44795532-44795551 Msa0771660:intron 45.0%
!!! TGACCTGCTGGCTTTTCAAA+AGG - chr5_2:44795567-44795586 Msa0771660:intron 45.0%
!! ACTCCTTTTGAAAAGCCAGC+AGG + chr5_2:44795573-44795592 None:intergenic 45.0%
AGTGAGCAGTTAGTATGGAG+AGG - chr5_2:44795729-44795748 Msa0771660:intron 45.0%
GTGAGCAGTTAGTATGGAGA+GGG - chr5_2:44795730-44795749 Msa0771660:intron 45.0%
TGAGCAGTTAGTATGGAGAG+GGG - chr5_2:44795731-44795750 Msa0771660:intron 45.0%
ATGAACTAGTGACCCTTTGG+GGG - chr5_2:44795766-44795785 Msa0771660:intron 45.0%
TGAGTGTGAAGTGGGAATTC+AGG - chr5_2:44795856-44795875 Msa0771660:intron 45.0%
GAGTGTGAAGTGGGAATTCA+GGG - chr5_2:44795857-44795876 Msa0771660:intron 45.0%
AGTGTGAAGTGGGAATTCAG+GGG - chr5_2:44795858-44795877 Msa0771660:intron 45.0%
GAATTCAGGGGCTGAGTATT+GGG - chr5_2:44795870-44795889 Msa0771660:intron 45.0%
TGGGTGATTCCCATCATAGA+AGG - chr5_2:44795889-44795908 Msa0771660:intron 45.0%
GGGTGATTCCCATCATAGAA+GGG - chr5_2:44795890-44795909 Msa0771660:intron 45.0%
GGTGATTCCCATCATAGAAG+GGG - chr5_2:44795891-44795910 Msa0771660:intron 45.0%
!! AGAAGGGGTGCTCTCAATAT+TGG - chr5_2:44795906-44795925 Msa0771660:intron 45.0%
GAGATGAATCGCCTTGCAAA+AGG + chr5_2:44795951-44795970 None:intergenic 45.0%
ATTGGAAGAGATGAGGGAGA+TGG - chr5_2:44796133-44796152 Msa0771660:intron 45.0%
! AAGAAATATGGAGGAGGCGT+TGG - chr5_2:44796187-44796206 Msa0771660:intron 45.0%
TTGGAGAGGCAAGCAAAGAA+AGG - chr5_2:44796206-44796225 Msa0771660:intron 45.0%
! AGATTTAGAGCAAGGGAGCA+AGG - chr5_2:44796262-44796281 Msa0771660:intron 45.0%
AGTATAGATCCAGAGAGGTG+AGG - chr5_2:44796366-44796385 Msa0771660:intron 45.0%
GTATAGATCCAGAGAGGTGA+GGG - chr5_2:44796367-44796386 Msa0771660:intron 45.0%
AGATCAAGACTCACCACAGA+TGG - chr5_2:44796390-44796409 Msa0771660:intron 45.0%
AGCAAAGGATCTTCCATCTG+TGG + chr5_2:44796406-44796425 None:intergenic 45.0%
GTTGGATACTAGCTCGACTA+TGG - chr5_2:44796438-44796457 Msa0771660:intron 45.0%
! GACCAGCTTGGATCTGATTT+TGG + chr5_2:44796494-44796513 None:intergenic 45.0%
ATGGGTCTTCAGTAACGACA+GGG - chr5_2:44796691-44796710 Msa0771660:intron 45.0%
TTCAGTAACGACAGGGCTTT+GGG - chr5_2:44796698-44796717 Msa0771660:intron 45.0%
! TTGTCTGGTGGCTTTACTGA+GGG + chr5_2:44796747-44796766 None:intergenic 45.0%
! TTTGTCTGGTGGCTTTACTG+AGG + chr5_2:44796748-44796767 None:intergenic 45.0%
! TATAGAGTACTCGAGCTAGG+TGG + chr5_2:44796798-44796817 None:intergenic 45.0%
TTGTTCTTTGCATGACGGCT+TGG + chr5_2:44796913-44796932 None:intergenic 45.0%
TCTCTGTTTACCCTAGTCAG+CGG + chr5_2:44796968-44796987 None:intergenic 45.0%
!!! GTTTTTTGAGTGCTTCCCCT+GGG + chr5_2:44797133-44797152 None:intergenic 45.0%
!!! TGTTTTTTGAGTGCTTCCCC+TGG + chr5_2:44797134-44797153 None:intergenic 45.0%
!! GGGGAAGCACTCAAAAAACA+AGG - chr5_2:44797134-44797153 Msa0771660:intron 45.0%
GAATAAGATCCAAGACCAGG+TGG - chr5_2:44797217-44797236 Msa0771660:intron 45.0%
GGCTTATTATTGCAGCTGCA+AGG - chr5_2:44797250-44797269 Msa0771660:intron 45.0%
! TGCAAGGAGGCTCTGTTTTA+TGG - chr5_2:44797266-44797285 Msa0771660:intron 45.0%
AACAGTGCATTCAACCCTTG+GGG - chr5_2:44797306-44797325 Msa0771660:intron 45.0%
GAAACAGAAGATCTTCCCCA+AGG + chr5_2:44797324-44797343 None:intergenic 45.0%
TTGCTTGGTCATCATCCTTC+AGG - chr5_2:44797348-44797367 Msa0771660:intron 45.0%
! GGTCATCATCCTTCAGGTTA+TGG - chr5_2:44797354-44797373 Msa0771660:intron 45.0%
CTAAATTCACCTCGTCCTCA+AGG + chr5_2:44797427-44797446 None:intergenic 45.0%
GAGGACGAGGTGAATTTAGT+TGG - chr5_2:44797428-44797447 Msa0771660:intron 45.0%
GACGAGGTGAATTTAGTTGG+TGG - chr5_2:44797431-44797450 Msa0771660:intron 45.0%
AGTGAATGGTTAGAAGGGAG+AGG - chr5_2:44797492-44797511 Msa0771660:intron 45.0%
GTGAATGGTTAGAAGGGAGA+GGG - chr5_2:44797493-44797512 Msa0771660:intron 45.0%
TGAATGGTTAGAAGGGAGAG+GGG - chr5_2:44797494-44797513 Msa0771660:intron 45.0%
GTAGTTCAAAGGAAGTGAGG+TGG - chr5_2:44797567-44797586 Msa0771660:intron 45.0%
GTGTCTGATGAGTGTGAAGT+GGG - chr5_2:44797599-44797618 Msa0771660:intron 45.0%
TGAGTGTGAAGTGGGAATTG+AGG - chr5_2:44797607-44797626 Msa0771660:intron 45.0%
GAGTGTGAAGTGGGAATTGA+GGG - chr5_2:44797608-44797627 Msa0771660:intron 45.0%
AGTGTGAAGTGGGAATTGAG+GGG - chr5_2:44797609-44797628 Msa0771660:intron 45.0%
TGTGGTGGCTTAACTGCATT+AGG + chr5_2:44797939-44797958 None:intergenic 45.0%
AGGCTATTCTGTTGATGTGG+TGG + chr5_2:44797954-44797973 None:intergenic 45.0%
!! GCCTTTGGAGACTATTTTCC+CGG - chr5_2:44797970-44797989 Msa0771660:intron 45.0%
ACCGGGAAAATAGTCTCCAA+AGG + chr5_2:44797974-44797993 None:intergenic 45.0%
TCAAGAGGGTTTACAACACC+GGG + chr5_2:44797991-44798010 None:intergenic 45.0%
GTCAAGAGGGTTTACAACAC+CGG + chr5_2:44797992-44798011 None:intergenic 45.0%
GTGTTGTAAACCCTCTTGAC+CGG - chr5_2:44797992-44798011 Msa0771660:intron 45.0%
! TAATTTTGTGGTCGGTCCCT+TGG - chr5_2:44798340-44798359 Msa0771660:intron 45.0%
! AATTTTGTGGTCGGTCCCTT+GGG - chr5_2:44798341-44798360 Msa0771660:intron 45.0%
TTAGTCCCTGGAGTTAACCA+GGG + chr5_2:44798721-44798740 None:intergenic 45.0%
TTTAGTCCCTGGAGTTAACC+AGG + chr5_2:44798722-44798741 None:intergenic 45.0%
CCAGGGACTAAAGTGATCAA+CGG - chr5_2:44798730-44798749 Msa0771660:intron 45.0%
GGACTAAAGTGATCAACGGA+AGG - chr5_2:44798734-44798753 Msa0771660:intron 45.0%
AATAGCCCTCGATTGGTAGA+GGG + chr5_2:44799322-44799341 None:intergenic 45.0%
AAATAGCCCTCGATTGGTAG+AGG + chr5_2:44799323-44799342 None:intergenic 45.0%
TTCACAGACTGCCAGTTCAT+AGG - chr5_2:44799485-44799504 Msa0771660:intron 45.0%
TGCCTGCACCACTAATATCA+TGG - chr5_2:44799709-44799728 Msa0771660:intron 45.0%
GTCCATGATATTAGTGGTGC+AGG + chr5_2:44799714-44799733 None:intergenic 45.0%
! GACTGTTTTGCTCATTCCTG+TGG - chr5_2:44799731-44799750 Msa0771660:intron 45.0%
CAGCTAGGGACACATCAAAA+AGG + chr5_2:44799986-44800005 None:intergenic 45.0%
ACCCTTAGAGTGTGTTTGGA+TGG - chr5_2:44800232-44800251 Msa0771660:intron 45.0%
CTCCATCCAAACACACTCTA+AGG + chr5_2:44800237-44800256 None:intergenic 45.0%
CTTAGAGTGTGTTTGGATGG+AGG - chr5_2:44800235-44800254 Msa0771660:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr5_2:44800242-44800261 Msa0771660:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr5_2:44800246-44800265 Msa0771660:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr5_2:44800454-44800473 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr5_2:44800456-44800475 None:intergenic 45.0%
! CTAAGGGTGTGTTTGGATTG+AGG + chr5_2:44800466-44800485 None:intergenic 45.0%
! AACAGAGCTAAGGGTGTGTT+TGG + chr5_2:44800473-44800492 None:intergenic 45.0%
!! AACACACCCTTAGCTCTGTT+AGG - chr5_2:44800473-44800492 Msa0771660:intron 45.0%
AGGCATCCTAACAGAGCTAA+GGG + chr5_2:44800482-44800501 None:intergenic 45.0%
! AAGGCATCCTAACAGAGCTA+AGG + chr5_2:44800483-44800502 None:intergenic 45.0%
GTGAAGTAGGCAAAGGTGAA+AGG + chr5_2:44800502-44800521 None:intergenic 45.0%
TGATGCAGTGAAGTAGGCAA+AGG + chr5_2:44800509-44800528 None:intergenic 45.0%
TTTGCCTACTTCACTGCATC+AGG - chr5_2:44800508-44800527 Msa0771660:intron 45.0%
TCTTCCTGATGCAGTGAAGT+AGG + chr5_2:44800515-44800534 None:intergenic 45.0%
ACTTCACTGCATCAGGAAGA+TGG - chr5_2:44800515-44800534 Msa0771660:intron 45.0%
CTCACGTCAGTGTACATAGT+TGG + chr5_2:44800731-44800750 None:intergenic 45.0%
ACTATGTACACTGACGTGAG+TGG - chr5_2:44800731-44800750 Msa0771660:CDS 45.0%
CTATGTACACTGACGTGAGT+GGG - chr5_2:44800732-44800751 Msa0771660:CDS 45.0%
GAACACTATCCAGTCAAACC+AGG - chr5_2:44800754-44800773 Msa0771660:CDS 45.0%
GAAGAAAAAAACCCCAGGGA+GGG + chr5_2:44800912-44800931 None:intergenic 45.0%
AGAAGAAAAAAACCCCAGGG+AGG + chr5_2:44800913-44800932 None:intergenic 45.0%
AACAACAACCCAAAGGGCTA+TGG + chr5_2:44800991-44801010 None:intergenic 45.0%
! TACCTCAACTCGTTTTGCCT+AGG - chr5_2:44801066-44801085 Msa0771660:intron 45.0%
TACCTAGGCAAAACGAGTTG+AGG + chr5_2:44801071-44801090 None:intergenic 45.0%
!! CGGTTTCTGGTAAAATCGGA+AGG + chr5_2:44801496-44801515 None:intergenic 45.0%
! TCTGAGGTAAACTCGGTTTC+TGG + chr5_2:44801509-44801528 None:intergenic 45.0%
ACCAATGTGTGTGCCATAGT+TGG - chr5_2:44801759-44801778 Msa0771660:intron 45.0%
TCCAACTATGGCACACACAT+TGG + chr5_2:44801763-44801782 None:intergenic 45.0%
AATGTGTGTGCCATAGTTGG+AGG - chr5_2:44801762-44801781 Msa0771660:intron 45.0%
CCTGTATGCAAAAGCAGGAA+TGG + chr5_2:44801893-44801912 None:intergenic 45.0%
!! CCATTCCTGCTTTTGCATAC+AGG - chr5_2:44801890-44801909 Msa0771660:CDS 45.0%
!! AGCACATACCTTGCTGTTGT+TGG - chr5_2:44802017-44802036 Msa0771660:intron 45.0%
! GCTGTTGTTGGAGTACTTTC+CGG - chr5_2:44802029-44802048 Msa0771660:intron 45.0%
!! AAAAAAAAAAAAAACTTATT+TGG - chr5_2:44794061-44794080 Msa0771660:intron 5.0%
!! AAAAAAAAAAAAACTTATTT+GGG - chr5_2:44794062-44794081 Msa0771660:intron 5.0%
!! TCAAAAAAAAAAAAAAAAAT+AGG + chr5_2:44794914-44794933 None:intergenic 5.0%
!! TTATAAAATAAAATTATTAC+AGG + chr5_2:44800082-44800101 None:intergenic 5.0%
!!! TAATTTTCATTTTTAAATTA+CGG + chr5_2:44800415-44800434 None:intergenic 5.0%
!! TCGCGATTTGGTTGAAGCAG+AGG + chr5_2:44790967-44790986 None:intergenic 50.0%
!! AGATGGTGGAACGCAAGCTT+AGG - chr5_2:44791851-44791870 Msa0771660:intron 50.0%
GAACGCAAGCTTAGGTGGTT+TGG - chr5_2:44791859-44791878 Msa0771660:intron 50.0%
CGACTTTGTGGGAAAAGGCT+TGG - chr5_2:44792079-44792098 Msa0771660:intron 50.0%
CTCGATGCCATGGACATTAG+CGG - chr5_2:44792580-44792599 Msa0771660:CDS 50.0%
CTGCCTCCATGTCTTTGCAA+GGG + chr5_2:44793211-44793230 None:intergenic 50.0%
! ATCCTGTTATGGTGCTGAGG+CGG - chr5_2:44793258-44793277 Msa0771660:intron 50.0%
GGCGGTAAGCCATAAGGATA+AGG - chr5_2:44793276-44793295 Msa0771660:intron 50.0%
!!! CAATTTTATGGCGCTGGCCA+TGG - chr5_2:44793617-44793636 Msa0771660:intron 50.0%
GAGCGCAATCTTGACAACCA+TGG + chr5_2:44793637-44793656 None:intergenic 50.0%
TTTGAACCGCTCCAACTTGG+TGG + chr5_2:44793699-44793718 None:intergenic 50.0%
!! ACAAAGAAGAGCGTTTGGCC+GGG - chr5_2:44793794-44793813 Msa0771660:intron 50.0%
! CGCTGGCTAATCCATGTGAT+GGG - chr5_2:44794360-44794379 Msa0771660:intron 50.0%
TTTGCGCTTGCAGTCAGATG+AGG - chr5_2:44794472-44794491 Msa0771660:intron 50.0%
TGCTTCACGAACTTCCTCAC+AGG + chr5_2:44794510-44794529 None:intergenic 50.0%
AAGCCCGGATTCAATTGACC+AGG - chr5_2:44794556-44794575 Msa0771660:intron 50.0%
GGAGGGTTCTCAATGTGCTT+CGG + chr5_2:44794736-44794755 None:intergenic 50.0%
CTGAACTGCTGATAGGGACT+TGG + chr5_2:44794857-44794876 None:intergenic 50.0%
GGAATTCAGGGGCTGAGTAT+TGG - chr5_2:44795869-44795888 Msa0771660:intron 50.0%
!! GAGAGCACCCCTTCTATGAT+GGG + chr5_2:44795901-44795920 None:intergenic 50.0%
!! TGAGAGCACCCCTTCTATGA+TGG + chr5_2:44795902-44795921 None:intergenic 50.0%
! GGTGTTGAAGCTCAGATCCT+TGG - chr5_2:44796069-44796088 Msa0771660:intron 50.0%
GCTCAGATCCTTGGAGTTAC+TGG - chr5_2:44796078-44796097 Msa0771660:intron 50.0%
GAGATGAGGGAGATGGTAGT+AGG - chr5_2:44796140-44796159 Msa0771660:intron 50.0%
TGGTAGTAGGACAGAAACGC+AGG - chr5_2:44796153-44796172 Msa0771660:intron 50.0%
GGTAGTAGGACAGAAACGCA+GGG - chr5_2:44796154-44796173 Msa0771660:intron 50.0%
CATCCTGCAGGTTTGGATCT+CGG - chr5_2:44796598-44796617 Msa0771660:intron 50.0%
ATCCTGCAGGTTTGGATCTC+GGG - chr5_2:44796599-44796618 Msa0771660:intron 50.0%
GATGGGTCTTCAGTAACGAC+AGG - chr5_2:44796690-44796709 Msa0771660:intron 50.0%
CTTCAGTAACGACAGGGCTT+TGG - chr5_2:44796697-44796716 Msa0771660:intron 50.0%
AAGCCACCAGACAAAGTTGC+AGG - chr5_2:44796753-44796772 Msa0771660:intron 50.0%
GAACCTGCAACTTTGTCTGG+TGG + chr5_2:44796759-44796778 None:intergenic 50.0%
AGTTGCAGGTTCAATGCCAC+TGG - chr5_2:44796767-44796786 Msa0771660:intron 50.0%
GTTGTGAGGAACAGGTTGTC+TGG - chr5_2:44796818-44796837 Msa0771660:intron 50.0%
!! CTTTTAGGAGGGGGTCTCAT+GGG + chr5_2:44797030-44797049 None:intergenic 50.0%
!! TCTTTTAGGAGGGGGTCTCA+TGG + chr5_2:44797031-44797050 None:intergenic 50.0%
TGTCTCTAACCACCTGGTCT+TGG + chr5_2:44797229-44797248 None:intergenic 50.0%
AGACCAGGTGGTTAGAGACA+AGG - chr5_2:44797229-44797248 Msa0771660:intron 50.0%
! AAGCCTTGTCTCTAACCACC+TGG + chr5_2:44797235-44797254 None:intergenic 50.0%
TCTAGGGACCCATAACCTGA+AGG + chr5_2:44797366-44797385 None:intergenic 50.0%
CAAGTTTCACCTTGAGGACG+AGG - chr5_2:44797415-44797434 Msa0771660:intron 50.0%
!! TACAGGTGGCTCTTTGGGAT+TGG - chr5_2:44797533-44797552 Msa0771660:intron 50.0%
TCAAAGGAAGTGAGGTGGGA+AGG - chr5_2:44797572-44797591 Msa0771660:intron 50.0%
GGTGTCTGATGAGTGTGAAG+TGG - chr5_2:44797598-44797617 Msa0771660:intron 50.0%
GGAATTGAGGGGCTGTGTAT+CGG - chr5_2:44797620-44797639 Msa0771660:intron 50.0%
GAATTGAGGGGCTGTGTATC+GGG - chr5_2:44797621-44797640 Msa0771660:intron 50.0%
AAAGAGCTCACCGGTCAAGA+GGG + chr5_2:44798005-44798024 None:intergenic 50.0%
TAAAGAGCTCACCGGTCAAG+AGG + chr5_2:44798006-44798025 None:intergenic 50.0%
TGGACACAAGAAACACCCAG+TGG - chr5_2:44798119-44798138 Msa0771660:intron 50.0%
GGACACAAGAAACACCCAGT+GGG - chr5_2:44798120-44798139 Msa0771660:intron 50.0%
GGAGTTAACCAGGGACGTTA+AGG + chr5_2:44798712-44798731 None:intergenic 50.0%
TAACGTCCCTGGTTAACTCC+AGG - chr5_2:44798712-44798731 Msa0771660:intron 50.0%
AACGTCCCTGGTTAACTCCA+GGG - chr5_2:44798713-44798732 Msa0771660:intron 50.0%
CCGTTGATCACTTTAGTCCC+TGG + chr5_2:44798733-44798752 None:intergenic 50.0%
ATAGCCCTCGATTGGTAGAG+GGG + chr5_2:44799321-44799340 None:intergenic 50.0%
TGCCAGTTCATAGGAGCTGT+CGG - chr5_2:44799494-44799513 Msa0771660:intron 50.0%
! TCGTGTAAGATGGTGGTGAC+TGG - chr5_2:44799544-44799563 Msa0771660:intron 50.0%
! TGTAAGATGGTGGTGACTGG+TGG - chr5_2:44799547-44799566 Msa0771660:intron 50.0%
! GTAAGATGGTGGTGACTGGT+GGG - chr5_2:44799548-44799567 Msa0771660:intron 50.0%
GATGGTGATCGAAGTTGCCT+AGG + chr5_2:44799589-44799608 None:intergenic 50.0%
TGAAGGAGTGGTGATACCAC+AGG + chr5_2:44799750-44799769 None:intergenic 50.0%
GTATCACCACTCCTTCAGTC+TGG - chr5_2:44799753-44799772 Msa0771660:intron 50.0%
!!! GTCTTTTGGGACGTCTCTCA+AGG - chr5_2:44800201-44800220 Msa0771660:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr5_2:44800245-44800264 Msa0771660:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr5_2:44800247-44800266 Msa0771660:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr5_2:44800449-44800468 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr5_2:44800450-44800469 None:intergenic 50.0%
!! CACTTTAGGACGGCAGATGT+AGG - chr5_2:44800875-44800894 Msa0771660:intron 50.0%
! GCGGAACATTGACTGCAACT+AGG - chr5_2:44801593-44801612 Msa0771660:intron 50.0%
! TTGGAGTACTTTCCGGTGAG+TGG - chr5_2:44802036-44802055 Msa0771660:intron 50.0%
TGGTGGAACGCAAGCTTAGG+TGG - chr5_2:44791854-44791873 Msa0771660:intron 55.0%
CCTGCCTCCATGTCTTTGCA+AGG + chr5_2:44793212-44793231 None:intergenic 55.0%
CCTTGCAAAGACATGGAGGC+AGG - chr5_2:44793209-44793228 Msa0771660:intron 55.0%
! CGGATCCTGTTATGGTGCTG+AGG - chr5_2:44793255-44793274 Msa0771660:intron 55.0%
TACCGCCTCAGCACCATAAC+AGG + chr5_2:44793263-44793282 None:intergenic 55.0%
TGCTGAGGCGGTAAGCCATA+AGG - chr5_2:44793270-44793289 Msa0771660:intron 55.0%
ACACCAAGCCTCCACCAAGT+TGG - chr5_2:44793685-44793704 Msa0771660:intron 55.0%
! AAGCCTCCACCAAGTTGGAG+CGG - chr5_2:44793690-44793709 Msa0771660:intron 55.0%
!! AGCGAAACAGAGCGCCGATT+TGG + chr5_2:44793774-44793793 None:intergenic 55.0%
ACGGGTCATACGAGTCAACC+CGG + chr5_2:44793815-44793834 None:intergenic 55.0%
CGTATGACCCGTTTCCGAAC+CGG - chr5_2:44793823-44793842 Msa0771660:intron 55.0%
!! AATCTGCGCCGGTTCGGAAA+CGG + chr5_2:44793834-44793853 None:intergenic 55.0%
TACAACCTGGGACGCGATTC+TGG + chr5_2:44793870-44793889 None:intergenic 55.0%
!! TTGTTGTTTCCTGCTGCGGC+TGG - chr5_2:44793938-44793957 Msa0771660:intron 55.0%
TTTAAGCAACCAGCCGCAGC+AGG + chr5_2:44793950-44793969 None:intergenic 55.0%
AGGCGGCTGCGTTATGTTGA+AGG - chr5_2:44793977-44793996 Msa0771660:intron 55.0%
!! GCGCTGGCTAATCCATGTGA+TGG - chr5_2:44794359-44794378 Msa0771660:intron 55.0%
CGTACATGTGCATGACCTGC+TGG - chr5_2:44795555-44795574 Msa0771660:intron 55.0%
! ACTAGTGACCCTTTGGGGGT+TGG - chr5_2:44795770-44795789 Msa0771660:intron 55.0%
!! ATATGGAGGAGGCGTTGGAG+AGG - chr5_2:44796192-44796211 Msa0771660:intron 55.0%
GAGCAAGGGAGCAAGGAAGA+AGG - chr5_2:44796269-44796288 Msa0771660:intron 55.0%
CAAGGAAGAAGGCAGCAAGC+TGG - chr5_2:44796280-44796299 Msa0771660:intron 55.0%
CTTGATCTCCCTCACCTCTC+TGG + chr5_2:44796378-44796397 None:intergenic 55.0%
AGATCCAAGCTGGTCCACTG+TGG - chr5_2:44796499-44796518 Msa0771660:intron 55.0%
TTCTCCACAGTGGACCAGCT+TGG + chr5_2:44796506-44796525 None:intergenic 55.0%
AAGCTGGTCCACTGTGGAGA+AGG - chr5_2:44796505-44796524 Msa0771660:intron 55.0%
TGGTCCACTGTGGAGAAGGA+AGG - chr5_2:44796509-44796528 Msa0771660:intron 55.0%
GGTCCACTGTGGAGAAGGAA+GGG - chr5_2:44796510-44796529 Msa0771660:intron 55.0%
ATGCCCTTCCTTCTCCACAG+TGG + chr5_2:44796516-44796535 None:intergenic 55.0%
!! GGAAGGGCATCTGACGATGA+AGG - chr5_2:44796526-44796545 Msa0771660:intron 55.0%
AGGTCACTGAGAGAGTGGGA+TGG - chr5_2:44796672-44796691 Msa0771660:intron 55.0%
GGTCACTGAGAGAGTGGGAT+GGG - chr5_2:44796673-44796692 Msa0771660:intron 55.0%
GAGCTAGGTGGTACAACCAG+TGG + chr5_2:44796786-44796805 None:intergenic 55.0%
AGGAAGTGAGGTGGGAAGGT+AGG - chr5_2:44797576-44797595 Msa0771660:intron 55.0%
GGAAGTGAGGTGGGAAGGTA+GGG - chr5_2:44797577-44797596 Msa0771660:intron 55.0%
TCGGGTGATTCCCATCTCAG+AGG - chr5_2:44797639-44797658 Msa0771660:intron 55.0%
CGGGTGATTCCCATCTCAGA+GGG - chr5_2:44797640-44797659 Msa0771660:intron 55.0%
GGGTGATTCCCATCTCAGAG+GGG - chr5_2:44797641-44797660 Msa0771660:intron 55.0%
!! GAGAGCAACCCCTCTGAGAT+GGG + chr5_2:44797652-44797671 None:intergenic 55.0%
! TGAGAGCAACCCCTCTGAGA+TGG + chr5_2:44797653-44797672 None:intergenic 55.0%
! ATCCTCTATGGGGGCGTGTA+AGG - chr5_2:44798630-44798649 Msa0771660:intron 55.0%
TACCTTACACGCCCCCATAG+AGG + chr5_2:44798635-44798654 None:intergenic 55.0%
TGCACTCTCCCCTTTCACAC+TGG - chr5_2:44799005-44799024 Msa0771660:intron 55.0%
TCCTCCCCTCTACCAATCGA+GGG - chr5_2:44799314-44799333 Msa0771660:intron 55.0%
AGCCGACAGCTCCTATGAAC+TGG + chr5_2:44799499-44799518 None:intergenic 55.0%
GGAAACAACAGCCACCACCT+AGG - chr5_2:44799569-44799588 Msa0771660:intron 55.0%
GATCGAAGTTGCCTAGGTGG+TGG + chr5_2:44799583-44799602 None:intergenic 55.0%
GGTGATCGAAGTTGCCTAGG+TGG + chr5_2:44799586-44799605 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG - chr5_2:44800251-44800270 Msa0771660:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - chr5_2:44800252-44800271 Msa0771660:intron 55.0%
GATAACACAGGGAACCCCAC+AGG + chr5_2:44802112-44802131 None:intergenic 55.0%
! GAACGGGGCGTTTCGCGATT+TGG + chr5_2:44790979-44790998 None:intergenic 60.0%
! GCTCCAACTTGGTGGAGGCT+TGG + chr5_2:44793691-44793710 None:intergenic 60.0%
! GAACCGCTCCAACTTGGTGG+AGG + chr5_2:44793696-44793715 None:intergenic 60.0%
!! ATCTGCGCCGGTTCGGAAAC+GGG + chr5_2:44793833-44793852 None:intergenic 60.0%
ACACTGGTGCGAATCTGCGC+CGG + chr5_2:44793845-44793864 None:intergenic 60.0%
! GGACGCGATTCTGGCTACAC+TGG + chr5_2:44793861-44793880 None:intergenic 60.0%
TGTAGCCAGAATCGCGTCCC+AGG - chr5_2:44793862-44793881 Msa0771660:intron 60.0%
AGGTTGGGCACTCTCAAGCC+CGG - chr5_2:44794541-44794560 Msa0771660:intron 60.0%
! AGTGACCCTTTGGGGGTTGG+AGG - chr5_2:44795773-44795792 Msa0771660:intron 60.0%
! GTGACCCTTTGGGGGTTGGA+GGG - chr5_2:44795774-44795793 Msa0771660:intron 60.0%
CCTACCCTCCAACCCCCAAA+GGG + chr5_2:44795781-44795800 None:intergenic 60.0%
TCCTACCCTCCAACCCCCAA+AGG + chr5_2:44795782-44795801 None:intergenic 60.0%
TGGGGGTTGGAGGGTAGGAA+AGG - chr5_2:44795783-44795802 Msa0771660:intron 60.0%
GGGTTGGAGGGTAGGAAAGG+AGG - chr5_2:44795786-44795805 Msa0771660:intron 60.0%
GGAGGGTAGGAAAGGAGGTG+AGG - chr5_2:44795791-44795810 Msa0771660:intron 60.0%
AAGGATGTGAGGGGGAGCTG+AGG - chr5_2:44795822-44795841 Msa0771660:intron 60.0%
AGGATGTGAGGGGGAGCTGA+GGG - chr5_2:44795823-44795842 Msa0771660:intron 60.0%
TGCCCGAGATCCAAACCTGC+AGG + chr5_2:44796604-44796623 None:intergenic 60.0%
!! TGCATGACGGCTTGGTCCGA+TGG + chr5_2:44796905-44796924 None:intergenic 60.0%
CAGAGGGGTTGCTCTCACTG+TGG - chr5_2:44797656-44797675 Msa0771660:intron 60.0%
CTCCTCCCCTCTACCAATCG+AGG - chr5_2:44799313-44799332 Msa0771660:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+AGG - chr5_2:44800257-44800276 Msa0771660:intron 60.0%
TTAGGAGGGGAAGGGAGAGG+AGG - chr5_2:44800260-44800279 Msa0771660:intron 60.0%
TAGGAGGGGAAGGGAGAGGA+GGG - chr5_2:44800261-44800280 Msa0771660:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr5_2:44800257-44800276 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr5_2:44800256-44800275 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr5_2:44800255-44800274 None:intergenic 60.0%
GTCTCTCGAGAGCCACTCAC+CGG + chr5_2:44802051-44802070 None:intergenic 60.0%
!! GGTGCGAATCTGCGCCGGTT+CGG + chr5_2:44793840-44793859 None:intergenic 65.0%
! CCCTTTGGGGGTTGGAGGGT+AGG - chr5_2:44795778-44795797 Msa0771660:intron 65.0%
GGATGTGAGGGGGAGCTGAG+GGG - chr5_2:44795824-44795843 Msa0771660:intron 65.0%
! GGGGGAGCTGAGGGGTATGA+TGG - chr5_2:44795832-44795851 Msa0771660:intron 65.0%
! GGTGCTAGCGCCGCTGACTA+GGG - chr5_2:44796955-44796974 Msa0771660:intron 65.0%
GCCCTCGATTGGTAGAGGGG+AGG + chr5_2:44799318-44799337 None:intergenic 65.0%
GCCGATTGCAGTCCCTCCCT+GGG - chr5_2:44800897-44800916 Msa0771660:intron 65.0%
CCCCAGGGAGGGACTGCAAT+CGG + chr5_2:44800901-44800920 None:intergenic 65.0%
CCGATTGCAGTCCCTCCCTG+GGG - chr5_2:44800898-44800917 Msa0771660:intron 65.0%
GCGGAGCGTACTGCGCACAG+AGG - chr5_2:44793733-44793752 Msa0771660:intron 70.0%
! GGGTGCTAGCGCCGCTGACT+AGG - chr5_2:44796954-44796973 Msa0771660:intron 70.0%
GGCCGATTGCAGTCCCTCCC+TGG - chr5_2:44800896-44800915 Msa0771660:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 44790938 44802405 44790938 ID=Msa0771660;Name=Msa0771660
chr5_2 mRNA 44790938 44802405 44790938 ID=Msa0771660-mRNA-1;Parent=Msa0771660;Name=Msa0771660-mRNA-1;_AED=0.13;_eAED=0.13;_QI=206|1|1|1|0.91|1|13|402|386
chr5_2 exon 44790938 44791431 44790938 ID=Msa0771660-mRNA-1:exon:13621;Parent=Msa0771660-mRNA-1
chr5_2 exon 44791560 44791626 44791560 ID=Msa0771660-mRNA-1:exon:13620;Parent=Msa0771660-mRNA-1
chr5_2 exon 44792391 44792483 44792391 ID=Msa0771660-mRNA-1:exon:13619;Parent=Msa0771660-mRNA-1
chr5_2 exon 44792568 44792621 44792568 ID=Msa0771660-mRNA-1:exon:13618;Parent=Msa0771660-mRNA-1
chr5_2 exon 44795180 44795231 44795180 ID=Msa0771660-mRNA-1:exon:13617;Parent=Msa0771660-mRNA-1
chr5_2 exon 44795330 44795397 44795330 ID=Msa0771660-mRNA-1:exon:13616;Parent=Msa0771660-mRNA-1
chr5_2 exon 44797743 44797922 44797743 ID=Msa0771660-mRNA-1:exon:13615;Parent=Msa0771660-mRNA-1
chr5_2 exon 44798766 44798858 44798766 ID=Msa0771660-mRNA-1:exon:13614;Parent=Msa0771660-mRNA-1
chr5_2 exon 44800064 44800144 44800064 ID=Msa0771660-mRNA-1:exon:13613;Parent=Msa0771660-mRNA-1
chr5_2 exon 44800527 44800607 44800527 ID=Msa0771660-mRNA-1:exon:13612;Parent=Msa0771660-mRNA-1
chr5_2 exon 44800722 44800805 44800722 ID=Msa0771660-mRNA-1:exon:13611;Parent=Msa0771660-mRNA-1
chr5_2 exon 44801889 44801962 44801889 ID=Msa0771660-mRNA-1:exon:13610;Parent=Msa0771660-mRNA-1
chr5_2 exon 44802058 44802405 44802058 ID=Msa0771660-mRNA-1:exon:13609;Parent=Msa0771660-mRNA-1
chr5_2 five_prime_UTR 44802200 44802405 44802200 ID=Msa0771660-mRNA-1:five_prime_utr;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44802058 44802199 44802058 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44801889 44801962 44801889 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44800722 44800805 44800722 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44800527 44800607 44800527 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44800064 44800144 44800064 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44798766 44798858 44798766 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44797743 44797922 44797743 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44795330 44795397 44795330 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44795180 44795231 44795180 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44792568 44792621 44792568 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44792391 44792483 44792391 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44791560 44791626 44791560 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 CDS 44791340 44791431 44791340 ID=Msa0771660-mRNA-1:cds;Parent=Msa0771660-mRNA-1
chr5_2 three_prime_UTR 44790938 44791339 44790938 ID=Msa0771660-mRNA-1:three_prime_utr;Parent=Msa0771660-mRNA-1
Gene Sequence

>Msa0771660

ATGGATACCATAATGAACAAGCTTCGTAATCTCGATGCATATCCTAAAATCAACGAAGATTTCTATAGTCGCACTCTTTCTGGCGGTCTAATCACTATCGTTTCTTCCATTCTCATGCTCTTGCTTTTCTTCTCCGAGCTTCGGTTGTATCTTCATGCTGCAACTGAAACTAAGCTTGTTGTAGATACTTCTAGAGGAGAAACGCTTCGTATTAATTTTGATGTTACATTTCCTGCACTAGCATGTTCTATACTTAGTCTCGATGCCATGGACATTAGCGGAGAACAACATCTGGATGTAAGACATGATATAATCAAGAAAAGAATAGACTCTCATGGCAATGTGATAGAAACAAGGCAAGATGGAATCGGTTCTCCCAACATTGAAAAACCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGCGGATCCTGTTATGGTGCTGAGGCGTCAGATGAGGAATGTTGTAATTCCTGTGAGGAAGTTCGTGAAGCATATCGAAAGAAAGGTTGGGCACTCTCAAGCCCGGATTCAATTGACCAGTGCAAAAGAGAAGGGTTCTTAGAAAGAATCAAGGAAGAAGAAGGTGAAGGATGCAATGTGTATGGCTTTTTGGAAGTAAACAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGCGTACATGTGCATGACCTGCTGGCTTTTCAAAAGGAGTCATTTAATTTAAGCCACCACATCAACAGAATAGCCTTTGGAGACTATTTTCCCGGTGTTGTAAACCCTCTTGACCGTGTGCATTGGACACAAGAAACACCCAGTGGGATGTATCAGTATTTTATAAAGGTGGTACCAACTATGTACACTGACGTGAGTGGGAACACTATCCAGTCAAACCAGTTCTCTGTGACAGAACACTTTAGGACGGCAGATGTAGGCCGATTGCAGTCCCTCCCTGGGGTTTTTTTCTTCTACGACCTTTCTCCAATTAAGGTTACTTTTACAGAAGAACATGTCTCATTCTTACATTTTCTTACCAATGTGTGTGCCATAGTTGGAGGAATTTTCACTGTTTCTGGAATACTAGATTCATTTATCTATCATGGCCAAAAGGCTATCAAGAAGAAGATGGAACTCGGCAAATTTAGCTGA

Protein sequence

>Msa0771660

MDTIMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSILSLDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQDGIGSPNIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSPDSIDQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNLSHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQSNQFSVTEHFRTADVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFTVSGILDSFIYHGQKAIKKKMELGKFS*