Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312100 | XP_003626978.1 | 84.583 | 240 | 19 | 2 | 1 | 223 | 1 | 239 | 9.19e-133 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312100 | sp|Q9LVW6|THA8_ARATH | 43.439 | 221 | 101 | 8 | 1 | 205 | 1 | 213 | 1.26e-45 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312100 | G7LFV8 | 84.583 | 240 | 19 | 2 | 1 | 223 | 1 | 239 | 4.39e-133 | 383 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa1312100 | 0.852226 | 5.305592e-61 | -8.615850e-47 |
| Msa0017980 | Msa1312100 | 0.803893 | 2.804176e-49 | -8.615850e-47 |
| Msa0061060 | Msa1312100 | 0.853539 | 2.235850e-61 | -8.615850e-47 |
| Msa0089510 | Msa1312100 | 0.816367 | 5.734803e-52 | -8.615850e-47 |
| Msa0089520 | Msa1312100 | 0.814357 | 1.605606e-51 | -8.615850e-47 |
| Msa0094670 | Msa1312100 | 0.825976 | 3.494446e-54 | -8.615850e-47 |
| Msa0097730 | Msa1312100 | 0.811033 | 8.569041e-51 | -8.615850e-47 |
| Msa0105590 | Msa1312100 | 0.828289 | 9.765000e-55 | -8.615850e-47 |
| Msa0115950 | Msa1312100 | 0.808370 | 3.202881e-50 | -8.615850e-47 |
| Msa0608780 | Msa1312100 | 0.818768 | 1.650060e-52 | -8.615850e-47 |
| Msa0610300 | Msa1312100 | 0.805880 | 1.078274e-49 | -8.615850e-47 |
| Msa0622250 | Msa1312100 | 0.831177 | 1.934982e-55 | -8.615850e-47 |
| Msa0644630 | Msa1312100 | 0.803444 | 3.476651e-49 | -8.615850e-47 |
| Msa0646340 | Msa1312100 | 0.809270 | 2.055454e-50 | -8.615850e-47 |
| Msa0649250 | Msa1312100 | 0.831804 | 1.355933e-55 | -8.615850e-47 |
| Msa0685890 | Msa1312100 | 0.803216 | 3.874507e-49 | -8.615850e-47 |
| Msa0692480 | Msa1312100 | 0.811885 | 5.597515e-51 | -8.615850e-47 |
| Msa0702360 | Msa1312100 | 0.816990 | 4.158060e-52 | -8.615850e-47 |
| Msa0702560 | Msa1312100 | 0.819214 | 1.306044e-52 | -8.615850e-47 |
| Msa0707270 | Msa1312100 | 0.819625 | 1.052724e-52 | -8.615850e-47 |
| Msa0726640 | Msa1312100 | 0.820063 | 8.358486e-53 | -8.615850e-47 |
| Msa0738280 | Msa1312100 | 0.810130 | 1.343307e-50 | -8.615850e-47 |
| Msa0745010 | Msa1312100 | 0.802344 | 5.865246e-49 | -8.615850e-47 |
| Msa0748330 | Msa1312100 | 0.833010 | 6.817999e-56 | -8.615850e-47 |
| Msa0767040 | Msa1312100 | 0.808365 | 3.210507e-50 | -8.615850e-47 |
| Msa0793100 | Msa1312100 | 0.814318 | 1.637616e-51 | -8.615850e-47 |
| Msa0829570 | Msa1312100 | 0.831611 | 1.513606e-55 | -8.615850e-47 |
| Msa0833630 | Msa1312100 | 0.804148 | 2.482583e-49 | -8.615850e-47 |
| Msa0157030 | Msa1312100 | 0.853044 | 3.099485e-61 | -8.615850e-47 |
| Msa0171920 | Msa1312100 | 0.811527 | 6.696637e-51 | -8.615850e-47 |
| Msa0224370 | Msa1312100 | 0.808550 | 2.931629e-50 | -8.615850e-47 |
| Msa0224400 | Msa1312100 | 0.826579 | 2.510925e-54 | -8.615850e-47 |
| Msa0235180 | Msa1312100 | 0.812521 | 4.066534e-51 | -8.615850e-47 |
| Msa1224820 | Msa1312100 | 0.825227 | 5.259003e-54 | -8.615850e-47 |
| Msa1226880 | Msa1312100 | 0.824048 | 9.968724e-54 | -8.615850e-47 |
| Msa1228350 | Msa1312100 | 0.842779 | 2.099173e-58 | -8.615850e-47 |
| Msa1228460 | Msa1312100 | 0.843175 | 1.647343e-58 | -8.615850e-47 |
| Msa1301610 | Msa1312100 | 0.807145 | 5.831510e-50 | -8.615850e-47 |
| Msa1312100 | Msa1338600 | 0.806832 | 6.791822e-50 | -8.615850e-47 |
| Msa1312100 | Msa1341390 | 0.810390 | 1.180614e-50 | -8.615850e-47 |
| Msa1312100 | Msa1349810 | 0.813498 | 2.482567e-51 | -8.615850e-47 |
| Msa1312100 | Msa1358340 | 0.812273 | 4.607037e-51 | -8.615850e-47 |
| Msa1312100 | Msa1393550 | 0.818330 | 2.073258e-52 | -8.615850e-47 |
| Msa1312100 | Msa1393720 | 0.822977 | 1.774775e-53 | -8.615850e-47 |
| Msa1312100 | Msa1404690 | 0.817821 | 2.703529e-52 | -8.615850e-47 |
| Msa1312100 | Msa1405380 | 0.841023 | 6.108828e-58 | -8.615850e-47 |
| Msa1312100 | Msa1406020 | 0.805135 | 1.544981e-49 | -8.615850e-47 |
| Msa1312100 | Msa1426310 | 0.818493 | 1.904771e-52 | -8.615850e-47 |
| Msa1312100 | Msa1456620 | 0.822272 | 2.589327e-53 | -8.615850e-47 |
| Msa1312100 | Msa1459590 | 0.819373 | 1.201721e-52 | -8.615850e-47 |
| Msa0387970 | Msa1312100 | 0.808166 | 3.538682e-50 | -8.615850e-47 |
| Msa0392050 | Msa1312100 | 0.800683 | 1.284738e-48 | -8.615850e-47 |
| Msa0425320 | Msa1312100 | 0.806436 | 8.232476e-50 | -8.615850e-47 |
| Msa0426480 | Msa1312100 | 0.800406 | 1.462966e-48 | -8.615850e-47 |
| Msa0440310 | Msa1312100 | 0.808283 | 3.341662e-50 | -8.615850e-47 |
| Msa0447830 | Msa1312100 | 0.807291 | 5.429972e-50 | -8.615850e-47 |
| Msa0469950 | Msa1312100 | 0.800363 | 1.492658e-48 | -8.615850e-47 |
| Msa0471760 | Msa1312100 | 0.812594 | 3.919697e-51 | -8.615850e-47 |
| Msa0473010 | Msa1312100 | 0.825768 | 3.915428e-54 | -8.615850e-47 |
| Msa0980980 | Msa1312100 | 0.847283 | 1.275201e-59 | -8.615850e-47 |
| Msa1031650 | Msa1312100 | 0.807365 | 5.239164e-50 | -8.615850e-47 |
| Msa1040390 | Msa1312100 | 0.801393 | 9.195092e-49 | -8.615850e-47 |
| Msa1076520 | Msa1312100 | 0.803500 | 3.384753e-49 | -8.615850e-47 |
| Msa1078600 | Msa1312100 | 0.820620 | 6.228744e-53 | -8.615850e-47 |
| Msa1078770 | Msa1312100 | 0.820672 | 6.062102e-53 | -8.615850e-47 |
| Msa1082150 | Msa1312100 | 0.850109 | 2.099510e-60 | -8.615850e-47 |
| Msa1092430 | Msa1312100 | 0.817087 | 3.954430e-52 | -8.615850e-47 |
| Msa0265440 | Msa1312100 | 0.813129 | 2.991898e-51 | -8.615850e-47 |
| Msa0304020 | Msa1312100 | 0.803127 | 4.043600e-49 | -8.615850e-47 |
| Msa0313800 | Msa1312100 | 0.802556 | 5.304675e-49 | -8.615850e-47 |
| Msa0344680 | Msa1312100 | 0.800220 | 1.596470e-48 | -8.615850e-47 |
| Msa1118460 | Msa1312100 | 0.813110 | 3.020978e-51 | -8.615850e-47 |
| Msa1122720 | Msa1312100 | 0.832952 | 7.048006e-56 | -8.615850e-47 |
| Msa1144730 | Msa1312100 | 0.802944 | 4.411633e-49 | -8.615850e-47 |
| Msa1169600 | Msa1312100 | 0.807168 | 5.766265e-50 | -8.615850e-47 |
| Msa1173380 | Msa1312100 | 0.803640 | 3.165507e-49 | -8.615850e-47 |
| Msa1184010 | Msa1312100 | 0.860000 | 2.802195e-63 | -8.615850e-47 |
| Msa0515460 | Msa1312100 | 0.815496 | 8.975600e-52 | -8.615850e-47 |
| Msa0517190 | Msa1312100 | 0.821764 | 3.394618e-53 | -8.615850e-47 |
| Msa0530340 | Msa1312100 | 0.806547 | 7.802295e-50 | -8.615850e-47 |
| Msa0548210 | Msa1312100 | 0.812568 | 3.971735e-51 | -8.615850e-47 |
| Msa0549540 | Msa1312100 | 0.800443 | 1.438096e-48 | -8.615850e-47 |
| Msa0550770 | Msa1312100 | 0.809056 | 2.284814e-50 | -8.615850e-47 |
| Msa0569230 | Msa1312100 | 0.805525 | 1.280179e-49 | -8.615850e-47 |
| Msa0576640 | Msa1312100 | 0.800992 | 1.111095e-48 | -8.615850e-47 |
| Msa0581490 | Msa1312100 | 0.807817 | 4.200201e-50 | -8.615850e-47 |
| Msa0587250 | Msa1312100 | 0.807602 | 4.664310e-50 | -8.615850e-47 |
| Msa0888900 | Msa1312100 | 0.820602 | 6.288437e-53 | -8.615850e-47 |
| Msa0912110 | Msa1312100 | 0.805016 | 1.636325e-49 | -8.615850e-47 |
| Msa0933220 | Msa1312100 | 0.811502 | 6.780761e-51 | -8.615850e-47 |
| Msa0944690 | Msa1312100 | 0.806061 | 9.875720e-50 | -8.615850e-47 |
| Msa0973380 | Msa1312100 | 0.822862 | 1.887339e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312100 | MtrunA17_Chr8g0340151 | 84.583 | 240 | 19 | 2 | 1 | 223 | 1 | 239 | 8.45e-137 | 383 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1312100 | AT3G27750.1 | 43.439 | 221 | 101 | 8 | 1 | 205 | 1 | 213 | 1.28e-46 | 154 |
| Msa1312100 | AT5G09315.1 | 38.095 | 105 | 51 | 2 | 42 | 132 | 45 | 149 | 3.11e-13 | 67.4 |
Find 77 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGTGGTGGTTGAAGGTTT+TGG | 0.219452 | 8_4:-9016912 | None:intergenic |
| GATTAAGCGGGTTAGGGTTT+TGG | 0.244148 | 8_4:-9017093 | None:intergenic |
| CGGATTTGATTAAGCGGGTT+AGG | 0.279881 | 8_4:-9017100 | None:intergenic |
| AGTAATGGGTTTAAGGGTTT+TGG | 0.283197 | 8_4:+9017914 | Msa1312100:CDS |
| GTTTGAGGAAAGTGGGGTTT+TGG | 0.295502 | 8_4:-9016869 | None:intergenic |
| TGGGTTTGAGTTTGGGTATG+TGG | 0.318623 | 8_4:-9017062 | None:intergenic |
| TTTGAAGTTGGGTTTGAGTT+TGG | 0.320504 | 8_4:-9017070 | None:intergenic |
| CCTTGACCATTTCGGCATAA+AGG | 0.320526 | 8_4:-9017223 | None:intergenic |
| AAGGCTAAATTCAATACGTT+TGG | 0.323424 | 8_4:+9017986 | Msa1312100:CDS |
| TTGGGGATTGAGAATGGTGG+TGG | 0.324162 | 8_4:-9016893 | None:intergenic |
| AGGCTAAATTCAATACGTTT+GGG | 0.325197 | 8_4:+9017987 | Msa1312100:CDS |
| CTTGACCATTTCGGCATAAA+GGG | 0.337671 | 8_4:-9017222 | None:intergenic |
| CATAATCATTTAGAATCTCT+TGG | 0.337679 | 8_4:-9017952 | None:intergenic |
| TTTGGGTATGTGGGTTAGTT+CGG | 0.340290 | 8_4:-9017052 | None:intergenic |
| TTGAAGTTGGGTTTGAGTTT+GGG | 0.349953 | 8_4:-9017069 | None:intergenic |
| TCACTCCCATTTCATTTCAA+TGG | 0.366708 | 8_4:+9016833 | None:intergenic |
| GTGGTGGGGTTTGAGGAAAG+TGG | 0.369136 | 8_4:-9016877 | None:intergenic |
| CTCCGGCGTGTGGTGGTTGA+AGG | 0.374055 | 8_4:-9016918 | None:intergenic |
| GTTGAAGAGGAGTGGGTGGG+GGG | 0.374250 | 8_4:+9017853 | Msa1312100:CDS |
| TGAGGTTACCTTGACCATTT+CGG | 0.374841 | 8_4:-9017231 | None:intergenic |
| AGATTCTAAATGATTATGAT+AGG | 0.381425 | 8_4:+9017957 | Msa1312100:CDS |
| AGAGGAGAGAATCGTTGGTT+AGG | 0.382438 | 8_4:+9017819 | Msa1312100:CDS |
| CTTGGATTGCTTCTATGCTT+AGG | 0.385874 | 8_4:-9017004 | None:intergenic |
| GAGAATGGTGGTGGGGTTTG+AGG | 0.394375 | 8_4:-9016884 | None:intergenic |
| TGGGGATTGAGAATGGTGGT+GGG | 0.409114 | 8_4:-9016892 | None:intergenic |
| TGTTGAAGAGGAGTGGGTGG+GGG | 0.411559 | 8_4:+9017852 | Msa1312100:CDS |
| GGGTTTGAGTTTGGGTATGT+GGG | 0.414772 | 8_4:-9017061 | None:intergenic |
| CGAGGTCCGCCGCAGTGTAC+TGG | 0.417051 | 8_4:-9016948 | None:intergenic |
| GGTGGGGTTTGAGGAAAGTG+GGG | 0.422489 | 8_4:-9016875 | None:intergenic |
| GGGCGGGATTGGGTGTGACG+AGG | 0.439351 | 8_4:+9017751 | Msa1312100:CDS |
| GGATTTGATTAAGCGGGTTA+GGG | 0.445768 | 8_4:-9017099 | None:intergenic |
| TGGTGGGGTTTGAGGAAAGT+GGG | 0.450538 | 8_4:-9016876 | None:intergenic |
| CGAGGGTGGGTTGTTCTTGA+CGG | 0.452730 | 8_4:-9017151 | None:intergenic |
| GAGGAGAGAATCGTTGGTTA+GGG | 0.455783 | 8_4:+9017820 | Msa1312100:CDS |
| TTGCTTCTATGCTTAGGAAT+CGG | 0.456678 | 8_4:-9016998 | None:intergenic |
| ATAATCATTTAGAATCTCTT+GGG | 0.463098 | 8_4:-9017951 | None:intergenic |
| ATGTTGAAGAGGAGTGGGTG+GGG | 0.467450 | 8_4:+9017851 | Msa1312100:CDS |
| ATATGATGAGTATGTTGTTA+AGG | 0.470819 | 8_4:+9017886 | Msa1312100:CDS |
| TCTCACCCTTTATGCCGAAA+TGG | 0.472566 | 8_4:+9017217 | Msa1312100:CDS |
| CTTTGATGAGCGGTCCACGC+TGG | 0.487131 | 8_4:-9016974 | None:intergenic |
| TTTGATGAGCGGTCCACGCT+GGG | 0.494346 | 8_4:-9016973 | None:intergenic |
| TCAGCCGTCCGATCTGAATA+CGG | 0.504958 | 8_4:+9017188 | Msa1312100:CDS |
| CAGCGTGGACCGCTCATCAA+AGG | 0.523040 | 8_4:+9016975 | Msa1312100:CDS |
| GGGTTTATGAGATGTTGAAG+AGG | 0.532556 | 8_4:+9017840 | Msa1312100:CDS |
| AGTGTACTGGAATGTAGCTC+CGG | 0.552029 | 8_4:-9016935 | None:intergenic |
| GGTGTGACGAGGATCAGAAA+GGG | 0.554474 | 8_4:+9017762 | Msa1312100:CDS |
| TACGAAGAGGAGAGAATCGT+TGG | 0.556559 | 8_4:+9017814 | Msa1312100:CDS |
| ATGAGATGTTGAAGAGGAGT+GGG | 0.560955 | 8_4:+9017846 | Msa1312100:CDS |
| GGGTGTGACGAGGATCAGAA+AGG | 0.563246 | 8_4:+9017761 | Msa1312100:CDS |
| GGTGTTGAGTTTGATTAAAG+CGG | 0.563790 | 8_4:+9017784 | Msa1312100:CDS |
| GGGGATTGAGAATGGTGGTG+GGG | 0.563873 | 8_4:-9016891 | None:intergenic |
| AGATGTTGAAGAGGAGTGGG+TGG | 0.565780 | 8_4:+9017849 | Msa1312100:CDS |
| GATGTTGAAGAGGAGTGGGT+GGG | 0.566227 | 8_4:+9017850 | Msa1312100:CDS |
| TTGATCGAGGAGATTGAAGT+GGG | 0.567661 | 8_4:+9017728 | Msa1312100:intron |
| GGCTAAATTCAATACGTTTG+GGG | 0.573047 | 8_4:+9017988 | Msa1312100:CDS |
| GAAGACACGAAGTGCGAGGG+TGG | 0.584193 | 8_4:-9017165 | None:intergenic |
| AGGAATCGGCCTTTGATGAG+CGG | 0.585216 | 8_4:-9016984 | None:intergenic |
| CCTTTATGCCGAAATGGTCA+AGG | 0.587782 | 8_4:+9017223 | Msa1312100:CDS |
| GATCGAGGAGATTGAAGTGG+GGG | 0.594548 | 8_4:+9017730 | Msa1312100:intron |
| TTTGATCGAGGAGATTGAAG+TGG | 0.599693 | 8_4:+9017727 | Msa1312100:intron |
| TAGGTCGGATTTGATTAAGC+GGG | 0.609134 | 8_4:-9017105 | None:intergenic |
| CTGAGAAGACACGAAGTGCG+AGG | 0.610021 | 8_4:-9017169 | None:intergenic |
| TGAGAAGACACGAAGTGCGA+GGG | 0.610177 | 8_4:-9017168 | None:intergenic |
| AATGTAGCTCCGGCGTGTGG+TGG | 0.621885 | 8_4:-9016925 | None:intergenic |
| AACCTTCAACCACCACACGC+CGG | 0.637949 | 8_4:+9016916 | Msa1312100:CDS |
| TATGAGATGTTGAAGAGGAG+TGG | 0.653096 | 8_4:+9017845 | Msa1312100:CDS |
| CTAGGTCGGATTTGATTAAG+CGG | 0.653151 | 8_4:-9017106 | None:intergenic |
| AAGACACGAAGTGCGAGGGT+GGG | 0.665738 | 8_4:-9017164 | None:intergenic |
| TACATTCCAGTACACTGCGG+CGG | 0.666312 | 8_4:+9016942 | Msa1312100:CDS |
| ATCGAGGAGATTGAAGTGGG+GGG | 0.671891 | 8_4:+9017731 | Msa1312100:intron |
| GATCAGCACCGTATTCAGAT+CGG | 0.674265 | 8_4:-9017196 | None:intergenic |
| AAGCGGTTGCTAGTACGAAG+AGG | 0.684483 | 8_4:+9017801 | Msa1312100:CDS |
| AGCACCGTATTCAGATCGGA+CGG | 0.685718 | 8_4:-9017192 | None:intergenic |
| GTGTGACGAGGATCAGAAAG+GGG | 0.692724 | 8_4:+9017763 | Msa1312100:CDS |
| GGCGGACCTCGTTCCCAGCG+TGG | 0.696139 | 8_4:+9016960 | Msa1312100:CDS |
| TGATCGAGGAGATTGAAGTG+GGG | 0.702678 | 8_4:+9017729 | Msa1312100:intron |
| AGCTACATTCCAGTACACTG+CGG | 0.817261 | 8_4:+9016939 | Msa1312100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTATAATTTTACATTAAT+TGG | + | chr8_4:9017440-9017459 | Msa1312100:intron | 10.0% |
| !!! | TACTATAATTTTACATTAAT+TGG | + | chr8_4:9017440-9017459 | Msa1312100:intron | 10.0% |
| !! | TCTACAAAATTTACATTAAT+CGG | - | chr8_4:9017524-9017543 | None:intergenic | 15.0% |
| !! | TCTACAAAATTTACATTAAT+CGG | - | chr8_4:9017524-9017543 | None:intergenic | 15.0% |
| !! | GTCATATTAATCTTTGATAA+TGG | - | chr8_4:9017258-9017277 | None:intergenic | 20.0% |
| !! | GTATATTGCATATTATTTAC+AGG | + | chr8_4:9017348-9017367 | Msa1312100:intron | 20.0% |
| !!! | ATAGTACATGATATATTTTC+AGG | - | chr8_4:9017426-9017445 | None:intergenic | 20.0% |
| !! | CTACAAAATTTACATTAATC+GGG | - | chr8_4:9017523-9017542 | None:intergenic | 20.0% |
| !!! | ATAATCATTTAGAATCTCTT+GGG | - | chr8_4:9017954-9017973 | None:intergenic | 20.0% |
| !! | AGATTCTAAATGATTATGAT+AGG | + | chr8_4:9017957-9017976 | Msa1312100:CDS | 20.0% |
| !! | GTCATATTAATCTTTGATAA+TGG | - | chr8_4:9017258-9017277 | None:intergenic | 20.0% |
| !! | GTATATTGCATATTATTTAC+AGG | + | chr8_4:9017348-9017367 | Msa1312100:intron | 20.0% |
| !!! | ATAGTACATGATATATTTTC+AGG | - | chr8_4:9017426-9017445 | None:intergenic | 20.0% |
| !! | CTACAAAATTTACATTAATC+GGG | - | chr8_4:9017523-9017542 | None:intergenic | 20.0% |
| !!! | ATAATCATTTAGAATCTCTT+GGG | - | chr8_4:9017954-9017973 | None:intergenic | 20.0% |
| !! | AGATTCTAAATGATTATGAT+AGG | + | chr8_4:9017957-9017976 | Msa1312100:CDS | 20.0% |
| !!! | TTAATCTTTGATAATGGTTG+AGG | - | chr8_4:9017252-9017271 | None:intergenic | 25.0% |
| ! | ATATGATGAGTATGTTGTTA+AGG | + | chr8_4:9017886-9017905 | Msa1312100:CDS | 25.0% |
| !!! | TTGTTAAGGTTTTGAGTAAT+GGG | + | chr8_4:9017900-9017919 | Msa1312100:CDS | 25.0% |
| !! | CATAATCATTTAGAATCTCT+TGG | - | chr8_4:9017955-9017974 | None:intergenic | 25.0% |
| !!! | TGATTATGATAGGTTTTGTA+AGG | + | chr8_4:9017967-9017986 | Msa1312100:CDS | 25.0% |
| !!! | TTAATCTTTGATAATGGTTG+AGG | - | chr8_4:9017252-9017271 | None:intergenic | 25.0% |
| ! | ATATGATGAGTATGTTGTTA+AGG | + | chr8_4:9017886-9017905 | Msa1312100:CDS | 25.0% |
| !!! | TTGTTAAGGTTTTGAGTAAT+GGG | + | chr8_4:9017900-9017919 | Msa1312100:CDS | 25.0% |
| !! | CATAATCATTTAGAATCTCT+TGG | - | chr8_4:9017955-9017974 | None:intergenic | 25.0% |
| !!! | TGATTATGATAGGTTTTGTA+AGG | + | chr8_4:9017967-9017986 | Msa1312100:CDS | 25.0% |
| ATATACTCCCAACTAAGTTA+AGG | - | chr8_4:9017334-9017353 | None:intergenic | 30.0% | |
| TGCATATTATTTACAGGAGT+CGG | + | chr8_4:9017354-9017373 | Msa1312100:intron | 30.0% | |
| ! | TTTCAGGTCAAATAAACTAG+TGG | - | chr8_4:9017410-9017429 | None:intergenic | 30.0% |
| TTACTTACAAAATCGACAGT+TGG | - | chr8_4:9017576-9017595 | None:intergenic | 30.0% | |
| !!! | GTTGTTAAGGTTTTGAGTAA+TGG | + | chr8_4:9017899-9017918 | Msa1312100:CDS | 30.0% |
| !!! | GTTTTGAGTAATGGGTTTAA+GGG | + | chr8_4:9017908-9017927 | Msa1312100:CDS | 30.0% |
| AAGGCTAAATTCAATACGTT+TGG | + | chr8_4:9017986-9018005 | Msa1312100:CDS | 30.0% | |
| AGGCTAAATTCAATACGTTT+GGG | + | chr8_4:9017987-9018006 | Msa1312100:CDS | 30.0% | |
| ATATACTCCCAACTAAGTTA+AGG | - | chr8_4:9017334-9017353 | None:intergenic | 30.0% | |
| TGCATATTATTTACAGGAGT+CGG | + | chr8_4:9017354-9017373 | Msa1312100:intron | 30.0% | |
| ! | TTTCAGGTCAAATAAACTAG+TGG | - | chr8_4:9017410-9017429 | None:intergenic | 30.0% |
| TTACTTACAAAATCGACAGT+TGG | - | chr8_4:9017576-9017595 | None:intergenic | 30.0% | |
| !!! | GTTGTTAAGGTTTTGAGTAA+TGG | + | chr8_4:9017899-9017918 | Msa1312100:CDS | 30.0% |
| !!! | GTTTTGAGTAATGGGTTTAA+GGG | + | chr8_4:9017908-9017927 | Msa1312100:CDS | 30.0% |
| AAGGCTAAATTCAATACGTT+TGG | + | chr8_4:9017986-9018005 | Msa1312100:CDS | 30.0% | |
| AGGCTAAATTCAATACGTTT+GGG | + | chr8_4:9017987-9018006 | Msa1312100:CDS | 30.0% | |
| TTGCTTCTATGCTTAGGAAT+CGG | - | chr8_4:9017001-9017020 | None:intergenic | 35.0% | |
| !! | GTTTTAGCGTTTGAATTGCT+TGG | - | chr8_4:9017025-9017044 | None:intergenic | 35.0% |
| ! | TTGAAGTTGGGTTTGAGTTT+GGG | - | chr8_4:9017072-9017091 | None:intergenic | 35.0% |
| ! | TTTGAAGTTGGGTTTGAGTT+TGG | - | chr8_4:9017073-9017092 | None:intergenic | 35.0% |
| !!! | TAGGGTTTTGGTTTGAAGTT+GGG | - | chr8_4:9017084-9017103 | None:intergenic | 35.0% |
| !!! | TTAGGGTTTTGGTTTGAAGT+TGG | - | chr8_4:9017085-9017104 | None:intergenic | 35.0% |
| GCATATTATTTACAGGAGTC+GGG | + | chr8_4:9017355-9017374 | Msa1312100:intron | 35.0% | |
| TTCAAACCCTGAAAATGTGT+GGG | + | chr8_4:9017378-9017397 | Msa1312100:intron | 35.0% | |
| ! | GGTGTTGAGTTTGATTAAAG+CGG | + | chr8_4:9017784-9017803 | Msa1312100:CDS | 35.0% |
| !!! | GGTTTTGAGTAATGGGTTTA+AGG | + | chr8_4:9017907-9017926 | Msa1312100:CDS | 35.0% |
| !!! | AGTAATGGGTTTAAGGGTTT+TGG | + | chr8_4:9017914-9017933 | Msa1312100:CDS | 35.0% |
| GGCTAAATTCAATACGTTTG+GGG | + | chr8_4:9017988-9018007 | Msa1312100:CDS | 35.0% | |
| TTGCTTCTATGCTTAGGAAT+CGG | - | chr8_4:9017001-9017020 | None:intergenic | 35.0% | |
| !! | GTTTTAGCGTTTGAATTGCT+TGG | - | chr8_4:9017025-9017044 | None:intergenic | 35.0% |
| ! | TTGAAGTTGGGTTTGAGTTT+GGG | - | chr8_4:9017072-9017091 | None:intergenic | 35.0% |
| ! | TTTGAAGTTGGGTTTGAGTT+TGG | - | chr8_4:9017073-9017092 | None:intergenic | 35.0% |
| !!! | TAGGGTTTTGGTTTGAAGTT+GGG | - | chr8_4:9017084-9017103 | None:intergenic | 35.0% |
| !!! | TTAGGGTTTTGGTTTGAAGT+TGG | - | chr8_4:9017085-9017104 | None:intergenic | 35.0% |
| GCATATTATTTACAGGAGTC+GGG | + | chr8_4:9017355-9017374 | Msa1312100:intron | 35.0% | |
| TTCAAACCCTGAAAATGTGT+GGG | + | chr8_4:9017378-9017397 | Msa1312100:intron | 35.0% | |
| ! | GGTGTTGAGTTTGATTAAAG+CGG | + | chr8_4:9017784-9017803 | Msa1312100:CDS | 35.0% |
| !!! | GGTTTTGAGTAATGGGTTTA+AGG | + | chr8_4:9017907-9017926 | Msa1312100:CDS | 35.0% |
| !!! | AGTAATGGGTTTAAGGGTTT+TGG | + | chr8_4:9017914-9017933 | Msa1312100:CDS | 35.0% |
| GGCTAAATTCAATACGTTTG+GGG | + | chr8_4:9017988-9018007 | Msa1312100:CDS | 35.0% | |
| !!! | AAGGTTTTGGGGATTGAGAA+TGG | - | chr8_4:9016902-9016921 | None:intergenic | 40.0% |
| CTTGGATTGCTTCTATGCTT+AGG | - | chr8_4:9017007-9017026 | None:intergenic | 40.0% | |
| !! | TTTGGGTATGTGGGTTAGTT+CGG | - | chr8_4:9017055-9017074 | None:intergenic | 40.0% |
| !! | GGATTTGATTAAGCGGGTTA+GGG | - | chr8_4:9017102-9017121 | None:intergenic | 40.0% |
| TAGGTCGGATTTGATTAAGC+GGG | - | chr8_4:9017108-9017127 | None:intergenic | 40.0% | |
| CTAGGTCGGATTTGATTAAG+CGG | - | chr8_4:9017109-9017128 | None:intergenic | 40.0% | |
| CTTGACCATTTCGGCATAAA+GGG | - | chr8_4:9017225-9017244 | None:intergenic | 40.0% | |
| TGAGGTTACCTTGACCATTT+CGG | - | chr8_4:9017234-9017253 | None:intergenic | 40.0% | |
| TCCCTTGACCTTAACTTAGT+TGG | + | chr8_4:9017323-9017342 | Msa1312100:intron | 40.0% | |
| CCCAACTAAGTTAAGGTCAA+GGG | - | chr8_4:9017327-9017346 | None:intergenic | 40.0% | |
| CCCTTGACCTTAACTTAGTT+GGG | + | chr8_4:9017324-9017343 | Msa1312100:intron | 40.0% | |
| TCCCAACTAAGTTAAGGTCA+AGG | - | chr8_4:9017328-9017347 | None:intergenic | 40.0% | |
| GTTCAAACCCTGAAAATGTG+TGG | + | chr8_4:9017377-9017396 | Msa1312100:intron | 40.0% | |
| CTTCAATCTCCTCGATCAAA+CGG | - | chr8_4:9017727-9017746 | None:intergenic | 40.0% | |
| TTTGATCGAGGAGATTGAAG+TGG | + | chr8_4:9017727-9017746 | Msa1312100:intron | 40.0% | |
| TTGATCGAGGAGATTGAAGT+GGG | + | chr8_4:9017728-9017747 | Msa1312100:intron | 40.0% | |
| GGGTTTATGAGATGTTGAAG+AGG | + | chr8_4:9017840-9017859 | Msa1312100:CDS | 40.0% | |
| TATGAGATGTTGAAGAGGAG+TGG | + | chr8_4:9017845-9017864 | Msa1312100:CDS | 40.0% | |
| ATGAGATGTTGAAGAGGAGT+GGG | + | chr8_4:9017846-9017865 | Msa1312100:CDS | 40.0% | |
| !!! | GTTTAAGGGTTTTGGTGATG+AGG | + | chr8_4:9017922-9017941 | Msa1312100:CDS | 40.0% |
| !!! | AAGGTTTTGGGGATTGAGAA+TGG | - | chr8_4:9016902-9016921 | None:intergenic | 40.0% |
| CTTGGATTGCTTCTATGCTT+AGG | - | chr8_4:9017007-9017026 | None:intergenic | 40.0% | |
| !! | TTTGGGTATGTGGGTTAGTT+CGG | - | chr8_4:9017055-9017074 | None:intergenic | 40.0% |
| !! | GGATTTGATTAAGCGGGTTA+GGG | - | chr8_4:9017102-9017121 | None:intergenic | 40.0% |
| TAGGTCGGATTTGATTAAGC+GGG | - | chr8_4:9017108-9017127 | None:intergenic | 40.0% | |
| CTAGGTCGGATTTGATTAAG+CGG | - | chr8_4:9017109-9017128 | None:intergenic | 40.0% | |
| CTTGACCATTTCGGCATAAA+GGG | - | chr8_4:9017225-9017244 | None:intergenic | 40.0% | |
| TGAGGTTACCTTGACCATTT+CGG | - | chr8_4:9017234-9017253 | None:intergenic | 40.0% | |
| TCCCTTGACCTTAACTTAGT+TGG | + | chr8_4:9017323-9017342 | Msa1312100:intron | 40.0% | |
| CCCAACTAAGTTAAGGTCAA+GGG | - | chr8_4:9017327-9017346 | None:intergenic | 40.0% | |
| CCCTTGACCTTAACTTAGTT+GGG | + | chr8_4:9017324-9017343 | Msa1312100:intron | 40.0% | |
| TCCCAACTAAGTTAAGGTCA+AGG | - | chr8_4:9017328-9017347 | None:intergenic | 40.0% | |
| GTTCAAACCCTGAAAATGTG+TGG | + | chr8_4:9017377-9017396 | Msa1312100:intron | 40.0% | |
| CTTCAATCTCCTCGATCAAA+CGG | - | chr8_4:9017727-9017746 | None:intergenic | 40.0% | |
| TTTGATCGAGGAGATTGAAG+TGG | + | chr8_4:9017727-9017746 | Msa1312100:intron | 40.0% | |
| TTGATCGAGGAGATTGAAGT+GGG | + | chr8_4:9017728-9017747 | Msa1312100:intron | 40.0% | |
| GGGTTTATGAGATGTTGAAG+AGG | + | chr8_4:9017840-9017859 | Msa1312100:CDS | 40.0% | |
| TATGAGATGTTGAAGAGGAG+TGG | + | chr8_4:9017845-9017864 | Msa1312100:CDS | 40.0% | |
| ATGAGATGTTGAAGAGGAGT+GGG | + | chr8_4:9017846-9017865 | Msa1312100:CDS | 40.0% | |
| !!! | GTTTAAGGGTTTTGGTGATG+AGG | + | chr8_4:9017922-9017941 | Msa1312100:CDS | 40.0% |
| ! | GTTTGAGGAAAGTGGGGTTT+TGG | - | chr8_4:9016872-9016891 | None:intergenic | 45.0% |
| !!! | GTTTTGGGGATTGAGAATGG+TGG | - | chr8_4:9016899-9016918 | None:intergenic | 45.0% |
| ! | TGTGGTGGTTGAAGGTTTTG+GGG | - | chr8_4:9016913-9016932 | None:intergenic | 45.0% |
| ! | GTGTGGTGGTTGAAGGTTTT+GGG | - | chr8_4:9016914-9016933 | None:intergenic | 45.0% |
| AGTGTACTGGAATGTAGCTC+CGG | - | chr8_4:9016938-9016957 | None:intergenic | 45.0% | |
| AGCTACATTCCAGTACACTG+CGG | + | chr8_4:9016939-9016958 | Msa1312100:CDS | 45.0% | |
| ! | GGGTTTGAGTTTGGGTATGT+GGG | - | chr8_4:9017064-9017083 | None:intergenic | 45.0% |
| ! | TGGGTTTGAGTTTGGGTATG+TGG | - | chr8_4:9017065-9017084 | None:intergenic | 45.0% |
| !!! | GATTAAGCGGGTTAGGGTTT+TGG | - | chr8_4:9017096-9017115 | None:intergenic | 45.0% |
| ! | CGGATTTGATTAAGCGGGTT+AGG | - | chr8_4:9017103-9017122 | None:intergenic | 45.0% |
| ! | TTTTAGCGTAGCGACTAGGT+CGG | - | chr8_4:9017123-9017142 | None:intergenic | 45.0% |
| GATCAGCACCGTATTCAGAT+CGG | - | chr8_4:9017199-9017218 | None:intergenic | 45.0% | |
| TCTCACCCTTTATGCCGAAA+TGG | + | chr8_4:9017217-9017236 | Msa1312100:CDS | 45.0% | |
| CCTTGACCATTTCGGCATAA+AGG | - | chr8_4:9017226-9017245 | None:intergenic | 45.0% | |
| CCTTTATGCCGAAATGGTCA+AGG | + | chr8_4:9017223-9017242 | Msa1312100:CDS | 45.0% | |
| ! | CTAGAGCCCACACATTTTCA+GGG | - | chr8_4:9017387-9017406 | None:intergenic | 45.0% |
| ! | GACGCTTTGAACCTTTATGC+AGG | + | chr8_4:9017667-9017686 | Msa1312100:intron | 45.0% |
| TTGAACCTTTATGCAGGTGC+TGG | + | chr8_4:9017673-9017692 | Msa1312100:intron | 45.0% | |
| TGAACCTTTATGCAGGTGCT+GGG | + | chr8_4:9017674-9017693 | Msa1312100:intron | 45.0% | |
| CTGTGGCATGGATGAAGAAA+TGG | + | chr8_4:9017700-9017719 | Msa1312100:intron | 45.0% | |
| AGAAATGGACCGTTTGATCG+AGG | + | chr8_4:9017715-9017734 | Msa1312100:intron | 45.0% | |
| TGATCGAGGAGATTGAAGTG+GGG | + | chr8_4:9017729-9017748 | Msa1312100:intron | 45.0% | |
| TACGAAGAGGAGAGAATCGT+TGG | + | chr8_4:9017814-9017833 | Msa1312100:CDS | 45.0% | |
| ! | AGAGGAGAGAATCGTTGGTT+AGG | + | chr8_4:9017819-9017838 | Msa1312100:CDS | 45.0% |
| ! | GAGGAGAGAATCGTTGGTTA+GGG | + | chr8_4:9017820-9017839 | Msa1312100:CDS | 45.0% |
| ! | GTTTGAGGAAAGTGGGGTTT+TGG | - | chr8_4:9016872-9016891 | None:intergenic | 45.0% |
| !!! | GTTTTGGGGATTGAGAATGG+TGG | - | chr8_4:9016899-9016918 | None:intergenic | 45.0% |
| ! | TGTGGTGGTTGAAGGTTTTG+GGG | - | chr8_4:9016913-9016932 | None:intergenic | 45.0% |
| ! | GTGTGGTGGTTGAAGGTTTT+GGG | - | chr8_4:9016914-9016933 | None:intergenic | 45.0% |
| AGTGTACTGGAATGTAGCTC+CGG | - | chr8_4:9016938-9016957 | None:intergenic | 45.0% | |
| AGCTACATTCCAGTACACTG+CGG | + | chr8_4:9016939-9016958 | Msa1312100:CDS | 45.0% | |
| ! | GGGTTTGAGTTTGGGTATGT+GGG | - | chr8_4:9017064-9017083 | None:intergenic | 45.0% |
| ! | TGGGTTTGAGTTTGGGTATG+TGG | - | chr8_4:9017065-9017084 | None:intergenic | 45.0% |
| !!! | GATTAAGCGGGTTAGGGTTT+TGG | - | chr8_4:9017096-9017115 | None:intergenic | 45.0% |
| ! | CGGATTTGATTAAGCGGGTT+AGG | - | chr8_4:9017103-9017122 | None:intergenic | 45.0% |
| ! | TTTTAGCGTAGCGACTAGGT+CGG | - | chr8_4:9017123-9017142 | None:intergenic | 45.0% |
| GATCAGCACCGTATTCAGAT+CGG | - | chr8_4:9017199-9017218 | None:intergenic | 45.0% | |
| TCTCACCCTTTATGCCGAAA+TGG | + | chr8_4:9017217-9017236 | Msa1312100:CDS | 45.0% | |
| CCTTGACCATTTCGGCATAA+AGG | - | chr8_4:9017226-9017245 | None:intergenic | 45.0% | |
| CCTTTATGCCGAAATGGTCA+AGG | + | chr8_4:9017223-9017242 | Msa1312100:CDS | 45.0% | |
| ! | CTAGAGCCCACACATTTTCA+GGG | - | chr8_4:9017387-9017406 | None:intergenic | 45.0% |
| ! | GACGCTTTGAACCTTTATGC+AGG | + | chr8_4:9017667-9017686 | Msa1312100:intron | 45.0% |
| TTGAACCTTTATGCAGGTGC+TGG | + | chr8_4:9017673-9017692 | Msa1312100:intron | 45.0% | |
| TGAACCTTTATGCAGGTGCT+GGG | + | chr8_4:9017674-9017693 | Msa1312100:intron | 45.0% | |
| CTGTGGCATGGATGAAGAAA+TGG | + | chr8_4:9017700-9017719 | Msa1312100:intron | 45.0% | |
| AGAAATGGACCGTTTGATCG+AGG | + | chr8_4:9017715-9017734 | Msa1312100:intron | 45.0% | |
| TGATCGAGGAGATTGAAGTG+GGG | + | chr8_4:9017729-9017748 | Msa1312100:intron | 45.0% | |
| TACGAAGAGGAGAGAATCGT+TGG | + | chr8_4:9017814-9017833 | Msa1312100:CDS | 45.0% | |
| ! | AGAGGAGAGAATCGTTGGTT+AGG | + | chr8_4:9017819-9017838 | Msa1312100:CDS | 45.0% |
| ! | GAGGAGAGAATCGTTGGTTA+GGG | + | chr8_4:9017820-9017839 | Msa1312100:CDS | 45.0% |
| TGGTGGGGTTTGAGGAAAGT+GGG | - | chr8_4:9016879-9016898 | None:intergenic | 50.0% | |
| TGGGGATTGAGAATGGTGGT+GGG | - | chr8_4:9016895-9016914 | None:intergenic | 50.0% | |
| TTGGGGATTGAGAATGGTGG+TGG | - | chr8_4:9016896-9016915 | None:intergenic | 50.0% | |
| ! | CGTGTGGTGGTTGAAGGTTT+TGG | - | chr8_4:9016915-9016934 | None:intergenic | 50.0% |
| TACATTCCAGTACACTGCGG+CGG | + | chr8_4:9016942-9016961 | Msa1312100:CDS | 50.0% | |
| AGGAATCGGCCTTTGATGAG+CGG | - | chr8_4:9016987-9017006 | None:intergenic | 50.0% | |
| ! | GCTCTTTTAGCGTAGCGACT+AGG | - | chr8_4:9017127-9017146 | None:intergenic | 50.0% |
| TGAGAAGACACGAAGTGCGA+GGG | - | chr8_4:9017171-9017190 | None:intergenic | 50.0% | |
| TCAGCCGTCCGATCTGAATA+CGG | + | chr8_4:9017188-9017207 | Msa1312100:CDS | 50.0% | |
| AGCACCGTATTCAGATCGGA+CGG | - | chr8_4:9017195-9017214 | None:intergenic | 50.0% | |
| ! | GCTAGAGCCCACACATTTTC+AGG | - | chr8_4:9017388-9017407 | None:intergenic | 50.0% |
| ! | GAACCTTTATGCAGGTGCTG+GGG | + | chr8_4:9017675-9017694 | Msa1312100:intron | 50.0% |
| GATCGAGGAGATTGAAGTGG+GGG | + | chr8_4:9017730-9017749 | Msa1312100:intron | 50.0% | |
| ATCGAGGAGATTGAAGTGGG+GGG | + | chr8_4:9017731-9017750 | Msa1312100:intron | 50.0% | |
| GGTGTGACGAGGATCAGAAA+GGG | + | chr8_4:9017762-9017781 | Msa1312100:CDS | 50.0% | |
| GTGTGACGAGGATCAGAAAG+GGG | + | chr8_4:9017763-9017782 | Msa1312100:CDS | 50.0% | |
| AAGCGGTTGCTAGTACGAAG+AGG | + | chr8_4:9017801-9017820 | Msa1312100:CDS | 50.0% | |
| AGATGTTGAAGAGGAGTGGG+TGG | + | chr8_4:9017849-9017868 | Msa1312100:CDS | 50.0% | |
| GATGTTGAAGAGGAGTGGGT+GGG | + | chr8_4:9017850-9017869 | Msa1312100:CDS | 50.0% | |
| ATGTTGAAGAGGAGTGGGTG+GGG | + | chr8_4:9017851-9017870 | Msa1312100:CDS | 50.0% | |
| TGGTGGGGTTTGAGGAAAGT+GGG | - | chr8_4:9016879-9016898 | None:intergenic | 50.0% | |
| TGGGGATTGAGAATGGTGGT+GGG | - | chr8_4:9016895-9016914 | None:intergenic | 50.0% | |
| TTGGGGATTGAGAATGGTGG+TGG | - | chr8_4:9016896-9016915 | None:intergenic | 50.0% | |
| ! | CGTGTGGTGGTTGAAGGTTT+TGG | - | chr8_4:9016915-9016934 | None:intergenic | 50.0% |
| TACATTCCAGTACACTGCGG+CGG | + | chr8_4:9016942-9016961 | Msa1312100:CDS | 50.0% | |
| AGGAATCGGCCTTTGATGAG+CGG | - | chr8_4:9016987-9017006 | None:intergenic | 50.0% | |
| ! | GCTCTTTTAGCGTAGCGACT+AGG | - | chr8_4:9017127-9017146 | None:intergenic | 50.0% |
| TGAGAAGACACGAAGTGCGA+GGG | - | chr8_4:9017171-9017190 | None:intergenic | 50.0% | |
| TCAGCCGTCCGATCTGAATA+CGG | + | chr8_4:9017188-9017207 | Msa1312100:CDS | 50.0% | |
| AGCACCGTATTCAGATCGGA+CGG | - | chr8_4:9017195-9017214 | None:intergenic | 50.0% | |
| ! | GCTAGAGCCCACACATTTTC+AGG | - | chr8_4:9017388-9017407 | None:intergenic | 50.0% |
| ! | GAACCTTTATGCAGGTGCTG+GGG | + | chr8_4:9017675-9017694 | Msa1312100:intron | 50.0% |
| GATCGAGGAGATTGAAGTGG+GGG | + | chr8_4:9017730-9017749 | Msa1312100:intron | 50.0% | |
| ATCGAGGAGATTGAAGTGGG+GGG | + | chr8_4:9017731-9017750 | Msa1312100:intron | 50.0% | |
| GGTGTGACGAGGATCAGAAA+GGG | + | chr8_4:9017762-9017781 | Msa1312100:CDS | 50.0% | |
| GTGTGACGAGGATCAGAAAG+GGG | + | chr8_4:9017763-9017782 | Msa1312100:CDS | 50.0% | |
| AAGCGGTTGCTAGTACGAAG+AGG | + | chr8_4:9017801-9017820 | Msa1312100:CDS | 50.0% | |
| AGATGTTGAAGAGGAGTGGG+TGG | + | chr8_4:9017849-9017868 | Msa1312100:CDS | 50.0% | |
| GATGTTGAAGAGGAGTGGGT+GGG | + | chr8_4:9017850-9017869 | Msa1312100:CDS | 50.0% | |
| ATGTTGAAGAGGAGTGGGTG+GGG | + | chr8_4:9017851-9017870 | Msa1312100:CDS | 50.0% | |
| GGTGGGGTTTGAGGAAAGTG+GGG | - | chr8_4:9016878-9016897 | None:intergenic | 55.0% | |
| ! | GTGGTGGGGTTTGAGGAAAG+TGG | - | chr8_4:9016880-9016899 | None:intergenic | 55.0% |
| !! | GAGAATGGTGGTGGGGTTTG+AGG | - | chr8_4:9016887-9016906 | None:intergenic | 55.0% |
| ! | GGGGATTGAGAATGGTGGTG+GGG | - | chr8_4:9016894-9016913 | None:intergenic | 55.0% |
| AACCTTCAACCACCACACGC+CGG | + | chr8_4:9016916-9016935 | Msa1312100:CDS | 55.0% | |
| TTTGATGAGCGGTCCACGCT+GGG | - | chr8_4:9016976-9016995 | None:intergenic | 55.0% | |
| !! | CGAGGGTGGGTTGTTCTTGA+CGG | - | chr8_4:9017154-9017173 | None:intergenic | 55.0% |
| AAGACACGAAGTGCGAGGGT+GGG | - | chr8_4:9017167-9017186 | None:intergenic | 55.0% | |
| CTGAGAAGACACGAAGTGCG+AGG | - | chr8_4:9017172-9017191 | None:intergenic | 55.0% | |
| GTTCCCCAGCACCTGCATAA+AGG | - | chr8_4:9017681-9017700 | None:intergenic | 55.0% | |
| GGGTGTGACGAGGATCAGAA+AGG | + | chr8_4:9017761-9017780 | Msa1312100:CDS | 55.0% | |
| TGTTGAAGAGGAGTGGGTGG+GGG | + | chr8_4:9017852-9017871 | Msa1312100:CDS | 55.0% | |
| GGTGGGGTTTGAGGAAAGTG+GGG | - | chr8_4:9016878-9016897 | None:intergenic | 55.0% | |
| ! | GTGGTGGGGTTTGAGGAAAG+TGG | - | chr8_4:9016880-9016899 | None:intergenic | 55.0% |
| !! | GAGAATGGTGGTGGGGTTTG+AGG | - | chr8_4:9016887-9016906 | None:intergenic | 55.0% |
| ! | GGGGATTGAGAATGGTGGTG+GGG | - | chr8_4:9016894-9016913 | None:intergenic | 55.0% |
| AACCTTCAACCACCACACGC+CGG | + | chr8_4:9016916-9016935 | Msa1312100:CDS | 55.0% | |
| TTTGATGAGCGGTCCACGCT+GGG | - | chr8_4:9016976-9016995 | None:intergenic | 55.0% | |
| !! | CGAGGGTGGGTTGTTCTTGA+CGG | - | chr8_4:9017154-9017173 | None:intergenic | 55.0% |
| AAGACACGAAGTGCGAGGGT+GGG | - | chr8_4:9017167-9017186 | None:intergenic | 55.0% | |
| CTGAGAAGACACGAAGTGCG+AGG | - | chr8_4:9017172-9017191 | None:intergenic | 55.0% | |
| GTTCCCCAGCACCTGCATAA+AGG | - | chr8_4:9017681-9017700 | None:intergenic | 55.0% | |
| GGGTGTGACGAGGATCAGAA+AGG | + | chr8_4:9017761-9017780 | Msa1312100:CDS | 55.0% | |
| TGTTGAAGAGGAGTGGGTGG+GGG | + | chr8_4:9017852-9017871 | Msa1312100:CDS | 55.0% | |
| AATGTAGCTCCGGCGTGTGG+TGG | - | chr8_4:9016928-9016947 | None:intergenic | 60.0% | |
| TGGAATGTAGCTCCGGCGTG+TGG | - | chr8_4:9016931-9016950 | None:intergenic | 60.0% | |
| CTTTGATGAGCGGTCCACGC+TGG | - | chr8_4:9016977-9016996 | None:intergenic | 60.0% | |
| CAGCGTGGACCGCTCATCAA+AGG | + | chr8_4:9016975-9016994 | Msa1312100:CDS | 60.0% | |
| GAAGACACGAAGTGCGAGGG+TGG | - | chr8_4:9017168-9017187 | None:intergenic | 60.0% | |
| !! | ATGCAGGTGCTGGGGAACTG+TGG | + | chr8_4:9017683-9017702 | Msa1312100:intron | 60.0% |
| GAGGAGATTGAAGTGGGGGG+CGG | + | chr8_4:9017734-9017753 | Msa1312100:intron | 60.0% | |
| AGGAGATTGAAGTGGGGGGC+GGG | + | chr8_4:9017735-9017754 | Msa1312100:intron | 60.0% | |
| ATTGAAGTGGGGGGCGGGAT+TGG | + | chr8_4:9017740-9017759 | Msa1312100:CDS | 60.0% | |
| TTGAAGTGGGGGGCGGGATT+GGG | + | chr8_4:9017741-9017760 | Msa1312100:CDS | 60.0% | |
| GTTGAAGAGGAGTGGGTGGG+GGG | + | chr8_4:9017853-9017872 | Msa1312100:CDS | 60.0% | |
| AATGTAGCTCCGGCGTGTGG+TGG | - | chr8_4:9016928-9016947 | None:intergenic | 60.0% | |
| TGGAATGTAGCTCCGGCGTG+TGG | - | chr8_4:9016931-9016950 | None:intergenic | 60.0% | |
| CTTTGATGAGCGGTCCACGC+TGG | - | chr8_4:9016977-9016996 | None:intergenic | 60.0% | |
| CAGCGTGGACCGCTCATCAA+AGG | + | chr8_4:9016975-9016994 | Msa1312100:CDS | 60.0% | |
| GAAGACACGAAGTGCGAGGG+TGG | - | chr8_4:9017168-9017187 | None:intergenic | 60.0% | |
| !! | ATGCAGGTGCTGGGGAACTG+TGG | + | chr8_4:9017683-9017702 | Msa1312100:intron | 60.0% |
| GAGGAGATTGAAGTGGGGGG+CGG | + | chr8_4:9017734-9017753 | Msa1312100:intron | 60.0% | |
| AGGAGATTGAAGTGGGGGGC+GGG | + | chr8_4:9017735-9017754 | Msa1312100:intron | 60.0% | |
| ATTGAAGTGGGGGGCGGGAT+TGG | + | chr8_4:9017740-9017759 | Msa1312100:CDS | 60.0% | |
| TTGAAGTGGGGGGCGGGATT+GGG | + | chr8_4:9017741-9017760 | Msa1312100:CDS | 60.0% | |
| GTTGAAGAGGAGTGGGTGGG+GGG | + | chr8_4:9017853-9017872 | Msa1312100:CDS | 60.0% | |
| CTCCGGCGTGTGGTGGTTGA+AGG | - | chr8_4:9016921-9016940 | None:intergenic | 65.0% | |
| ! | GGTGCTGGGGAACTGTGGCA+TGG | + | chr8_4:9017688-9017707 | Msa1312100:intron | 65.0% |
| CTCCGGCGTGTGGTGGTTGA+AGG | - | chr8_4:9016921-9016940 | None:intergenic | 65.0% | |
| ! | GGTGCTGGGGAACTGTGGCA+TGG | + | chr8_4:9017688-9017707 | Msa1312100:intron | 65.0% |
| CGAGGTCCGCCGCAGTGTAC+TGG | - | chr8_4:9016951-9016970 | None:intergenic | 70.0% | |
| AGCGGTCCACGCTGGGAACG+AGG | - | chr8_4:9016969-9016988 | None:intergenic | 70.0% | |
| GGGCGGGATTGGGTGTGACG+AGG | + | chr8_4:9017751-9017770 | Msa1312100:CDS | 70.0% | |
| GAAGAGGAGTGGGTGGGGGG+AGG | + | chr8_4:9017856-9017875 | Msa1312100:CDS | 70.0% | |
| CGAGGTCCGCCGCAGTGTAC+TGG | - | chr8_4:9016951-9016970 | None:intergenic | 70.0% | |
| AGCGGTCCACGCTGGGAACG+AGG | - | chr8_4:9016969-9016988 | None:intergenic | 70.0% | |
| GGGCGGGATTGGGTGTGACG+AGG | + | chr8_4:9017751-9017770 | Msa1312100:CDS | 70.0% | |
| GAAGAGGAGTGGGTGGGGGG+AGG | + | chr8_4:9017856-9017875 | Msa1312100:CDS | 70.0% | |
| GGCGGACCTCGTTCCCAGCG+TGG | + | chr8_4:9016960-9016979 | Msa1312100:CDS | 75.0% | |
| GGCGGACCTCGTTCCCAGCG+TGG | + | chr8_4:9016960-9016979 | Msa1312100:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 9016846 | 9018018 | 9016846 | ID=Msa1312100;Name=Msa1312100 |
| chr8_4 | mRNA | 9016846 | 9018018 | 9016846 | ID=Msa1312100-mRNA-1;Parent=Msa1312100;Name=Msa1312100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=6|0|0.5|1|1|1|2|0|223 |
| chr8_4 | exon | 9016846 | 9017244 | 9016846 | ID=Msa1312100-mRNA-1:exon:3332;Parent=Msa1312100-mRNA-1 |
| chr8_4 | exon | 9017740 | 9018018 | 9017740 | ID=Msa1312100-mRNA-1:exon:3333;Parent=Msa1312100-mRNA-1 |
| chr8_4 | five_prime_UTR | 9016846 | 9016851 | 9016846 | ID=Msa1312100-mRNA-1:five_prime_utr;Parent=Msa1312100-mRNA-1 |
| chr8_4 | CDS | 9016852 | 9017244 | 9016852 | ID=Msa1312100-mRNA-1:cds;Parent=Msa1312100-mRNA-1 |
| chr8_4 | CDS | 9017740 | 9018018 | 9017740 | ID=Msa1312100-mRNA-1:cds;Parent=Msa1312100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
