AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1031650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031650 MtrunA17_Chr7g0253181 98.310 355 6 0 1 355 1 355 0.0 719
Msa1031650 MtrunA17_Chr6g0461551 25.970 335 231 8 31 354 58 386 2.65e-30 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1031650 AT1G64770.1 59.551 356 134 5 1 354 1 348 4.84e-143 409
Msa1031650 AT1G64770.3 57.143 294 117 4 1 293 1 286 9.41e-107 317
Msa1031650 AT1G64770.2 57.732 291 114 4 1 290 1 283 1.25e-106 315
Msa1031650 AT1G55370.2 25.076 327 205 7 31 353 63 353 3.31e-24 102

Find 98 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCCTTTGTTATCCATTT+TGG 0.158639 7_1:+66371653 None:intergenic
AAAAGCCTTTGTTCTTTCTT+TGG 0.192458 7_1:+66370142 None:intergenic
CTCTTCTCTTAAATCTAAAA+TGG 0.228276 7_1:+66370387 None:intergenic
CTTACAAACCAAAAGTGTTT+TGG 0.257885 7_1:-66371165 Msa1031650:CDS
ATAGCATTGGTTAGAGTAAC+AGG 0.282402 7_1:+66370416 None:intergenic
CACTGGTCCTGCTTCAATAT+TGG 0.282753 7_1:-66369714 Msa1031650:CDS
TGATGCCATTGATGCTTTAC+AGG 0.286647 7_1:-66370978 Msa1031650:intron
GAGGCACTCAATGAGAAATT+TGG 0.299035 7_1:-66371295 Msa1031650:CDS
CATGAACCTGGCTTCAATTC+AGG 0.299182 7_1:+66370230 None:intergenic
GCCATAGAGAAAACGTAATA+AGG 0.304954 7_1:+66371403 None:intergenic
TCATCTTTCCAAAACACTTT+TGG 0.306270 7_1:+66371157 None:intergenic
AAGAAAAGGCATCAAATTCT+TGG 0.308484 7_1:-66371272 Msa1031650:CDS
AAAGCCTTTGTTCTTTCTTT+GGG 0.310843 7_1:+66370143 None:intergenic
GGTTCCATGTCAGACAAATA+TGG 0.314864 7_1:-66369755 Msa1031650:CDS
TATTGATATTATTGTACTAT+AGG 0.315280 7_1:+66369460 None:intergenic
TACAAAGCTAAAGGTGGAAT+TGG 0.328683 7_1:-66371085 Msa1031650:CDS
TTGGTTAGAGTAACAGGTTT+TGG 0.328743 7_1:+66370422 None:intergenic
TTATTCTCAAGGAGAGTAAT+AGG 0.341075 7_1:+66370191 None:intergenic
AGAGGTGGTGCGGCAATTAA+AGG 0.342398 7_1:-66370368 Msa1031650:CDS
TCTCAAAGGTTGATTTCATT+TGG 0.368709 7_1:-66370260 Msa1031650:CDS
ACAATTTCTGCCAATGAAAC+AGG 0.375886 7_1:-66371112 Msa1031650:CDS
AACATGAATTTCCTTCTTTG+AGG 0.377917 7_1:-66371511 Msa1031650:five_prime_UTR
TTCAGAAACACACAAACTTA+TGG 0.380122 7_1:+66369533 None:intergenic
GTTTAGTTTGGGAAGAGATA+AGG 0.400038 7_1:+66371369 None:intergenic
GATGGAGTCAAGATTTGAAA+AGG 0.400664 7_1:+66370302 None:intergenic
AATGAGAAATTTGGAAGAAA+AGG 0.401880 7_1:-66371286 Msa1031650:CDS
AGCTAAAGGTGGAATTGGTT+TGG 0.410266 7_1:-66371080 Msa1031650:CDS
TTTGTAAAGACCTGTTTCAT+TGG 0.415282 7_1:+66371102 None:intergenic
AAAATATGAAATCATTGATC+AGG 0.416361 7_1:-66370102 Msa1031650:intron
TGCTTCCTTCCACTTTAGAA+TGG 0.417981 7_1:-66371021 Msa1031650:CDS
TTCTACAGGGTGATAAGAAT+GGG 0.419592 7_1:-66369806 Msa1031650:CDS
TAAGATGTTACATGAGCATC+AGG 0.437810 7_1:+66371184 None:intergenic
TTTCTACAGGGTGATAAGAA+TGG 0.440970 7_1:-66369807 Msa1031650:CDS
AGAGAGCAAGAAAGGGTGAA+AGG 0.441533 7_1:+66369577 None:intergenic
GTTGAGCTAACAGTTAGAAA+TGG 0.444856 7_1:-66371229 Msa1031650:CDS
AGTTTGTGTGTTTCTGAAGC+AGG 0.451544 7_1:-66369528 Msa1031650:three_prime_UTR
TTGAACTCATGGCTTACTCT+TGG 0.455278 7_1:+66371572 None:intergenic
ATCGGGGAACCAAAGTGCTC+AGG 0.457365 7_1:+66369389 None:intergenic
TATTTGTCTGACATGGAACC+AGG 0.462459 7_1:+66369758 None:intergenic
CATTGAATCCCTGAGCACTT+TGG 0.465984 7_1:-66369398 Msa1031650:three_prime_UTR
GCCTTTGTTCTTTCTTTGGG+AGG 0.467470 7_1:+66370146 None:intergenic
AATTTCTCATTGAGTGCCTC+AGG 0.469202 7_1:+66371298 None:intergenic
CTGAATTGAAGCCAGGTTCA+TGG 0.470856 7_1:-66370229 Msa1031650:CDS
ACATGTTTGCATTGAACTCA+TGG 0.475418 7_1:+66371561 None:intergenic
TTGTACCTGTAAAGCATCAA+TGG 0.481550 7_1:+66370973 None:intergenic
GGTGATAAGAATGGGATTTG+AGG 0.481567 7_1:-66369798 Msa1031650:CDS
ATGGAGTCAAGATTTGAAAA+GGG 0.482931 7_1:+66370303 None:intergenic
TTGCCATGCTCACAGGATAG+AGG 0.487005 7_1:+66370471 None:intergenic
CTTTACAGTCCATTCTAAAG+TGG 0.493143 7_1:+66371012 None:intergenic
GAGCCTGTGACTGTGAATCC+TGG 0.502873 7_1:-66369692 Msa1031650:CDS
ACTCATGGCTTACTCTTGGA+TGG 0.504925 7_1:+66371576 None:intergenic
CCTTGTTGAGTCCATGAACC+TGG 0.507008 7_1:+66370218 None:intergenic
GATATTTACGTGTCAAGCCC+TGG 0.509482 7_1:-66369776 Msa1031650:CDS
CACTTTAGAATGGACTGTAA+AGG 0.510876 7_1:-66371011 Msa1031650:CDS
GCTCCTCTGAATTCTTCACC+AGG 0.521135 7_1:+66369674 None:intergenic
GTTCCATGTCAGACAAATAT+GGG 0.524034 7_1:-66369754 Msa1031650:CDS
CTAACTGTTAGCTCAACAAT+GGG 0.524594 7_1:+66371235 None:intergenic
ACTGCTGTTGCCATGCTCAC+AGG 0.530706 7_1:+66370464 None:intergenic
TGAAATCAACCTTTGAGACT+CGG 0.532325 7_1:+66370265 None:intergenic
GAAAAGGGGAAGCAAGAGGA+GGG 0.532333 7_1:+66370318 None:intergenic
AAAATGGCTTAATATAGCAT+TGG 0.535095 7_1:+66370403 None:intergenic
TCTAACTGTTAGCTCAACAA+TGG 0.537764 7_1:+66371234 None:intergenic
CCTCCCATATTTGTCTGACA+TGG 0.538146 7_1:+66369751 None:intergenic
ACAGGTCTTTACAAAGCTAA+AGG 0.540122 7_1:-66371094 Msa1031650:CDS
TCACCAGGATTCACAGTCAC+AGG 0.541793 7_1:+66369689 None:intergenic
TGTAGTTGTAGCAGCTGAAG+AGG 0.545993 7_1:+66371336 None:intergenic
GCTGAGCCTGAATTGAAGCC+AGG 0.546842 7_1:-66370236 Msa1031650:CDS
ACAGTCCATTCTAAAGTGGA+AGG 0.547893 7_1:+66371016 None:intergenic
TTTAGATTTAAGAGAAGAGG+TGG 0.556422 7_1:-66370383 Msa1031650:CDS
ACAGGCTCCAATATTGAAGC+AGG 0.556496 7_1:+66369707 None:intergenic
GCAAGAAAGGGTGAAAGGAA+AGG 0.556566 7_1:+66369582 None:intergenic
TCGGGGAACCAAAGTGCTCA+GGG 0.556605 7_1:+66369390 None:intergenic
TGGATAACAAAGGATATATG+TGG 0.557176 7_1:-66371647 Msa1031650:five_prime_UTR
AGGGTGTGAGCAGTATGAGC+AGG 0.560744 7_1:+66370337 None:intergenic
CAATGAAAACCGAGTCTCAA+AGG 0.560884 7_1:-66370274 Msa1031650:CDS
TCAAGTAAACAAATATACAT+AGG 0.564621 7_1:+66369490 None:intergenic
GTCCCTCTATCCTGTGAGCA+TGG 0.565166 7_1:-66370474 Msa1031650:CDS
CTCTACTCATCTTATTCTCA+AGG 0.565176 7_1:+66370180 None:intergenic
TGAAAAGGGGAAGCAAGAGG+AGG 0.568175 7_1:+66370317 None:intergenic
TGCCATGCTCACAGGATAGA+GGG 0.569663 7_1:+66370472 None:intergenic
AGCGATTGATTCTGTGTGGA+AGG 0.576921 7_1:+66371538 None:intergenic
ATGCTCATAATTTGTTTGTG+TGG 0.577668 7_1:-66371443 Msa1031650:five_prime_UTR
TTGGAAAGATGATGGACTTG+AGG 0.594368 7_1:-66371146 Msa1031650:CDS
CCAGGTTCATGGACTCAACA+AGG 0.611546 7_1:-66370218 Msa1031650:CDS
AGTGCCTCAGGAGTTGAAAG+AGG 0.618743 7_1:+66371310 None:intergenic
GGTCTTTACAAAGCTAAAGG+TGG 0.622769 7_1:-66371091 Msa1031650:CDS
TGGAGTCAAGATTTGAAAAG+GGG 0.631264 7_1:+66370304 None:intergenic
ATTTGAAAAGGGGAAGCAAG+AGG 0.647512 7_1:+66370314 None:intergenic
AACACCTCTTTCAACTCCTG+AGG 0.654317 7_1:-66371314 Msa1031650:CDS
AAGGCCAAAATGGATAACAA+AGG 0.654919 7_1:-66371657 Msa1031650:five_prime_UTR
CATGTCAGACAAATATGGGA+GGG 0.662782 7_1:-66369750 Msa1031650:CDS
ACCTCCCAAAGAAAGAACAA+AGG 0.664272 7_1:-66370147 Msa1031650:CDS
ATTTAAGAGAAGAGGTGGTG+CGG 0.665156 7_1:-66370378 Msa1031650:CDS
CCATGTCAGACAAATATGGG+AGG 0.669410 7_1:-66369751 Msa1031650:CDS
AATCCTGGTGAAGAATTCAG+AGG 0.670082 7_1:-66369677 Msa1031650:CDS
ATTTGTCTGACATGGAACCA+GGG 0.675047 7_1:+66369759 None:intergenic
TTGAATGAAGTATTACAACC+TGG 0.675139 7_1:-66371055 Msa1031650:CDS
GTCAAGCGATTGATTCTGTG+TGG 0.705706 7_1:+66371534 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACTATTCTATAAAA+AGG + chr7_1:66371190-66371209 None:intergenic 10.0%
!! AAAAAAACTATTCTATAAAA+AGG + chr7_1:66371190-66371209 None:intergenic 10.0%
!!! AATTGTAATAGAATACTTTT+TGG + chr7_1:66369567-66369586 None:intergenic 15.0%
!! TATTGATATTATTGTACTAT+AGG + chr7_1:66371582-66371601 None:intergenic 15.0%
!!! AATTGTAATAGAATACTTTT+TGG + chr7_1:66369567-66369586 None:intergenic 15.0%
!! TATTGATATTATTGTACTAT+AGG + chr7_1:66371582-66371601 None:intergenic 15.0%
!!! AATACTTTTTGGTTTGATTT+TGG + chr7_1:66369556-66369575 None:intergenic 20.0%
!!! TAATAAGGTACTTTTTTAAG+AGG + chr7_1:66369624-66369643 None:intergenic 20.0%
!!! GCTTTTATTAAGTTTAGTTT+GGG + chr7_1:66369684-66369703 None:intergenic 20.0%
!!! AGAACATGAATTTATTTTGT+TGG - chr7_1:66370130-66370149 Msa1031650:CDS 20.0%
!!! TCAATGATTTCATATTTTGA+AGG + chr7_1:66370935-66370954 None:intergenic 20.0%
!! AAAATATGAAATCATTGATC+AGG - chr7_1:66370937-66370956 Msa1031650:intron 20.0%
!!! ATAGTTTTTTTCTTTCTTTC+AGG - chr7_1:66371199-66371218 Msa1031650:CDS 20.0%
!!! TAGTTTTTTTCTTTCTTTCA+GGG - chr7_1:66371200-66371219 Msa1031650:CDS 20.0%
!! TCAAGTAAACAAATATACAT+AGG + chr7_1:66371552-66371571 None:intergenic 20.0%
!!! AATACTTTTTGGTTTGATTT+TGG + chr7_1:66369556-66369575 None:intergenic 20.0%
!!! TAATAAGGTACTTTTTTAAG+AGG + chr7_1:66369624-66369643 None:intergenic 20.0%
!!! GCTTTTATTAAGTTTAGTTT+GGG + chr7_1:66369684-66369703 None:intergenic 20.0%
!!! AGAACATGAATTTATTTTGT+TGG - chr7_1:66370130-66370149 Msa1031650:CDS 20.0%
!!! TCAATGATTTCATATTTTGA+AGG + chr7_1:66370935-66370954 None:intergenic 20.0%
!! AAAATATGAAATCATTGATC+AGG - chr7_1:66370937-66370956 Msa1031650:intron 20.0%
!!! ATAGTTTTTTTCTTTCTTTC+AGG - chr7_1:66371199-66371218 Msa1031650:CDS 20.0%
!!! TAGTTTTTTTCTTTCTTTCA+GGG - chr7_1:66371200-66371219 Msa1031650:CDS 20.0%
!! TCAAGTAAACAAATATACAT+AGG + chr7_1:66371552-66371571 None:intergenic 20.0%
!!! ATATCCTTTGTTATCCATTT+TGG + chr7_1:66369389-66369408 None:intergenic 25.0%
! CAATCTAATAGTGTCAAAAA+AGG + chr7_1:66369441-66369460 None:intergenic 25.0%
!! GGCTTTTATTAAGTTTAGTT+TGG + chr7_1:66369685-66369704 None:intergenic 25.0%
! AATGAGAAATTTGGAAGAAA+AGG - chr7_1:66369753-66369772 Msa1031650:CDS 25.0%
!! TAATCACATTTGAAGCAAAA+GGG + chr7_1:66370111-66370130 None:intergenic 25.0%
! ACACTCAATAAATTTGAGAA+CGG + chr7_1:66370238-66370257 None:intergenic 25.0%
!!! ATTCGGAAATATGATTTGTT+TGG + chr7_1:66370367-66370386 None:intergenic 25.0%
! AAAATGGCTTAATATAGCAT+TGG + chr7_1:66370639-66370658 None:intergenic 25.0%
! CTCTTCTCTTAAATCTAAAA+TGG + chr7_1:66370655-66370674 None:intergenic 25.0%
!! CATTTTAGATTTAAGAGAAG+AGG - chr7_1:66370653-66370672 Msa1031650:intron 25.0%
!!! ATGATTTCATATTTTGAAGG+CGG + chr7_1:66370932-66370951 None:intergenic 25.0%
!! CATATAAGATGATTTGTGAT+TGG - chr7_1:66371041-66371060 Msa1031650:CDS 25.0%
! CATGAAAAATTCCAAATGTT+TGG + chr7_1:66371148-66371167 None:intergenic 25.0%
! ATAAAAAAGAGAGCAAGAAA+GGG + chr7_1:66371472-66371491 None:intergenic 25.0%
! AATAAAAAAGAGAGCAAGAA+AGG + chr7_1:66371473-66371492 None:intergenic 25.0%
!!! ATATCCTTTGTTATCCATTT+TGG + chr7_1:66369389-66369408 None:intergenic 25.0%
! CAATCTAATAGTGTCAAAAA+AGG + chr7_1:66369441-66369460 None:intergenic 25.0%
!! GGCTTTTATTAAGTTTAGTT+TGG + chr7_1:66369685-66369704 None:intergenic 25.0%
! AATGAGAAATTTGGAAGAAA+AGG - chr7_1:66369753-66369772 Msa1031650:CDS 25.0%
!! TAATCACATTTGAAGCAAAA+GGG + chr7_1:66370111-66370130 None:intergenic 25.0%
! ACACTCAATAAATTTGAGAA+CGG + chr7_1:66370238-66370257 None:intergenic 25.0%
!!! ATTCGGAAATATGATTTGTT+TGG + chr7_1:66370367-66370386 None:intergenic 25.0%
! AAAATGGCTTAATATAGCAT+TGG + chr7_1:66370639-66370658 None:intergenic 25.0%
! CTCTTCTCTTAAATCTAAAA+TGG + chr7_1:66370655-66370674 None:intergenic 25.0%
!! CATTTTAGATTTAAGAGAAG+AGG - chr7_1:66370653-66370672 Msa1031650:intron 25.0%
!!! ATGATTTCATATTTTGAAGG+CGG + chr7_1:66370932-66370951 None:intergenic 25.0%
!! CATATAAGATGATTTGTGAT+TGG - chr7_1:66371041-66371060 Msa1031650:CDS 25.0%
! CATGAAAAATTCCAAATGTT+TGG + chr7_1:66371148-66371167 None:intergenic 25.0%
! ATAAAAAAGAGAGCAAGAAA+GGG + chr7_1:66371472-66371491 None:intergenic 25.0%
! AATAAAAAAGAGAGCAAGAA+AGG + chr7_1:66371473-66371492 None:intergenic 25.0%
TGGATAACAAAGGATATATG+TGG - chr7_1:66369392-66369411 Msa1031650:three_prime_UTR 30.0%
AACATGAATTTCCTTCTTTG+AGG - chr7_1:66369528-66369547 Msa1031650:three_prime_UTR 30.0%
!! ATGCTCATAATTTGTTTGTG+TGG - chr7_1:66369596-66369615 Msa1031650:three_prime_UTR 30.0%
! ACCTTATTACGTTTTCTCTA+TGG - chr7_1:66369635-66369654 Msa1031650:exon 30.0%
!! AAGAAAAGGCATCAAATTCT+TGG - chr7_1:66369767-66369786 Msa1031650:CDS 30.0%
!!! CTTACAAACCAAAAGTGTTT+TGG - chr7_1:66369874-66369893 Msa1031650:intron 30.0%
! TCATCTTTCCAAAACACTTT+TGG + chr7_1:66369885-66369904 None:intergenic 30.0%
!!! AAAGTGTTTTGGAAAGATGA+TGG - chr7_1:66369885-66369904 Msa1031650:intron 30.0%
TTTGTAAAGACCTGTTTCAT+TGG + chr7_1:66369940-66369959 None:intergenic 30.0%
! TTGAATGAAGTATTACAACC+TGG - chr7_1:66369984-66370003 Msa1031650:intron 30.0%
! CTAATCACATTTGAAGCAAA+AGG + chr7_1:66370112-66370131 None:intergenic 30.0%
!! AATGCATTGATTGTGCTAAA+TGG + chr7_1:66370406-66370425 None:intergenic 30.0%
GAAAGTGAAATACTGAAAGT+TGG - chr7_1:66370459-66370478 Msa1031650:CDS 30.0%
TTTAGATTTAAGAGAAGAGG+TGG - chr7_1:66370656-66370675 Msa1031650:intron 30.0%
ATGGAGTCAAGATTTGAAAA+GGG + chr7_1:66370739-66370758 None:intergenic 30.0%
! TCTCAAAGGTTGATTTCATT+TGG - chr7_1:66370779-66370798 Msa1031650:intron 30.0%
TTATTCTCAAGGAGAGTAAT+AGG + chr7_1:66370851-66370870 None:intergenic 30.0%
AAAGCCTTTGTTCTTTCTTT+GGG + chr7_1:66370899-66370918 None:intergenic 30.0%
AAAAGCCTTTGTTCTTTCTT+TGG + chr7_1:66370900-66370919 None:intergenic 30.0%
AAATCGTTCCAGAACTTAAT+CGG + chr7_1:66371108-66371127 None:intergenic 30.0%
AAAAGGCTTCACTCAATAAT+TGG + chr7_1:66371173-66371192 None:intergenic 30.0%
TTCAGAAACACACAAACTTA+TGG + chr7_1:66371509-66371528 None:intergenic 30.0%
TGGATAACAAAGGATATATG+TGG - chr7_1:66369392-66369411 Msa1031650:three_prime_UTR 30.0%
AACATGAATTTCCTTCTTTG+AGG - chr7_1:66369528-66369547 Msa1031650:three_prime_UTR 30.0%
!! ATGCTCATAATTTGTTTGTG+TGG - chr7_1:66369596-66369615 Msa1031650:three_prime_UTR 30.0%
! ACCTTATTACGTTTTCTCTA+TGG - chr7_1:66369635-66369654 Msa1031650:exon 30.0%
!! AAGAAAAGGCATCAAATTCT+TGG - chr7_1:66369767-66369786 Msa1031650:CDS 30.0%
!!! CTTACAAACCAAAAGTGTTT+TGG - chr7_1:66369874-66369893 Msa1031650:intron 30.0%
! TCATCTTTCCAAAACACTTT+TGG + chr7_1:66369885-66369904 None:intergenic 30.0%
!!! AAAGTGTTTTGGAAAGATGA+TGG - chr7_1:66369885-66369904 Msa1031650:intron 30.0%
TTTGTAAAGACCTGTTTCAT+TGG + chr7_1:66369940-66369959 None:intergenic 30.0%
! TTGAATGAAGTATTACAACC+TGG - chr7_1:66369984-66370003 Msa1031650:intron 30.0%
! CTAATCACATTTGAAGCAAA+AGG + chr7_1:66370112-66370131 None:intergenic 30.0%
!! AATGCATTGATTGTGCTAAA+TGG + chr7_1:66370406-66370425 None:intergenic 30.0%
GAAAGTGAAATACTGAAAGT+TGG - chr7_1:66370459-66370478 Msa1031650:CDS 30.0%
TTTAGATTTAAGAGAAGAGG+TGG - chr7_1:66370656-66370675 Msa1031650:intron 30.0%
ATGGAGTCAAGATTTGAAAA+GGG + chr7_1:66370739-66370758 None:intergenic 30.0%
! TCTCAAAGGTTGATTTCATT+TGG - chr7_1:66370779-66370798 Msa1031650:intron 30.0%
TTATTCTCAAGGAGAGTAAT+AGG + chr7_1:66370851-66370870 None:intergenic 30.0%
AAAGCCTTTGTTCTTTCTTT+GGG + chr7_1:66370899-66370918 None:intergenic 30.0%
AAAAGCCTTTGTTCTTTCTT+TGG + chr7_1:66370900-66370919 None:intergenic 30.0%
AAATCGTTCCAGAACTTAAT+CGG + chr7_1:66371108-66371127 None:intergenic 30.0%
AAAAGGCTTCACTCAATAAT+TGG + chr7_1:66371173-66371192 None:intergenic 30.0%
TTCAGAAACACACAAACTTA+TGG + chr7_1:66371509-66371528 None:intergenic 30.0%
AAGGCCAAAATGGATAACAA+AGG - chr7_1:66369382-66369401 Msa1031650:three_prime_UTR 35.0%
ACATGTTTGCATTGAACTCA+TGG + chr7_1:66369481-66369500 None:intergenic 35.0%
!!! TGATTTTGGTTCCTCAAAGA+AGG + chr7_1:66369542-66369561 None:intergenic 35.0%
GCCATAGAGAAAACGTAATA+AGG + chr7_1:66369639-66369658 None:intergenic 35.0%
!! GTTTAGTTTGGGAAGAGATA+AGG + chr7_1:66369673-66369692 None:intergenic 35.0%
CTAACTGTTAGCTCAACAAT+GGG + chr7_1:66369807-66369826 None:intergenic 35.0%
TCTAACTGTTAGCTCAACAA+TGG + chr7_1:66369808-66369827 None:intergenic 35.0%
GTTGAGCTAACAGTTAGAAA+TGG - chr7_1:66369810-66369829 Msa1031650:CDS 35.0%
TAAGATGTTACATGAGCATC+AGG + chr7_1:66369858-66369877 None:intergenic 35.0%
ACAATTTCTGCCAATGAAAC+AGG - chr7_1:66369927-66369946 Msa1031650:intron 35.0%
ACAGGTCTTTACAAAGCTAA+AGG - chr7_1:66369945-66369964 Msa1031650:intron 35.0%
TACAAAGCTAAAGGTGGAAT+TGG - chr7_1:66369954-66369973 Msa1031650:intron 35.0%
! CTTTACAGTCCATTCTAAAG+TGG + chr7_1:66370030-66370049 None:intergenic 35.0%
!! CACTTTAGAATGGACTGTAA+AGG - chr7_1:66370028-66370047 Msa1031650:intron 35.0%
! TTGTACCTGTAAAGCATCAA+TGG + chr7_1:66370069-66370088 None:intergenic 35.0%
CGGAAGCTAATTATACGTTA+AGG + chr7_1:66370218-66370237 None:intergenic 35.0%
! TAGCTTTTGCATTTTCACGT+TGG + chr7_1:66370285-66370304 None:intergenic 35.0%
! TAGAAATTGTCACTTCAAGC+TGG - chr7_1:66370303-66370322 Msa1031650:CDS 35.0%
GTATGATGAAACTGGTGATT+CGG + chr7_1:66370384-66370403 None:intergenic 35.0%
GCTAAATGGTATGATGAAAC+TGG + chr7_1:66370392-66370411 None:intergenic 35.0%
! TTGGTTAGAGTAACAGGTTT+TGG + chr7_1:66370620-66370639 None:intergenic 35.0%
!! ATAGCATTGGTTAGAGTAAC+AGG + chr7_1:66370626-66370645 None:intergenic 35.0%
TGGAGTCAAGATTTGAAAAG+GGG + chr7_1:66370738-66370757 None:intergenic 35.0%
GATGGAGTCAAGATTTGAAA+AGG + chr7_1:66370740-66370759 None:intergenic 35.0%
!! TGAAATCAACCTTTGAGACT+CGG + chr7_1:66370777-66370796 None:intergenic 35.0%
CTCTACTCATCTTATTCTCA+AGG + chr7_1:66370862-66370881 None:intergenic 35.0%
!! TTCTGGAACGATTTACATTG+TGG - chr7_1:66371114-66371133 Msa1031650:CDS 35.0%
TTTCTACAGGGTGATAAGAA+TGG - chr7_1:66371232-66371251 Msa1031650:CDS 35.0%
TTCTACAGGGTGATAAGAAT+GGG - chr7_1:66371233-66371252 Msa1031650:CDS 35.0%
GTTCCATGTCAGACAAATAT+GGG - chr7_1:66371285-66371304 Msa1031650:CDS 35.0%
! AGAAGTAGTTTTCATCATCG+GGG + chr7_1:66371669-66371688 None:intergenic 35.0%
! GAGAAGTAGTTTTCATCATC+GGG + chr7_1:66371670-66371689 None:intergenic 35.0%
!! CATTTTGGCCTTTTTTCCTT+GGG + chr7_1:66369374-66369393 None:intergenic 35.0%
AAGGCCAAAATGGATAACAA+AGG - chr7_1:66369382-66369401 Msa1031650:three_prime_UTR 35.0%
ACATGTTTGCATTGAACTCA+TGG + chr7_1:66369481-66369500 None:intergenic 35.0%
!!! TGATTTTGGTTCCTCAAAGA+AGG + chr7_1:66369542-66369561 None:intergenic 35.0%
GCCATAGAGAAAACGTAATA+AGG + chr7_1:66369639-66369658 None:intergenic 35.0%
!! GTTTAGTTTGGGAAGAGATA+AGG + chr7_1:66369673-66369692 None:intergenic 35.0%
CTAACTGTTAGCTCAACAAT+GGG + chr7_1:66369807-66369826 None:intergenic 35.0%
TCTAACTGTTAGCTCAACAA+TGG + chr7_1:66369808-66369827 None:intergenic 35.0%
GTTGAGCTAACAGTTAGAAA+TGG - chr7_1:66369810-66369829 Msa1031650:CDS 35.0%
TAAGATGTTACATGAGCATC+AGG + chr7_1:66369858-66369877 None:intergenic 35.0%
ACAATTTCTGCCAATGAAAC+AGG - chr7_1:66369927-66369946 Msa1031650:intron 35.0%
ACAGGTCTTTACAAAGCTAA+AGG - chr7_1:66369945-66369964 Msa1031650:intron 35.0%
TACAAAGCTAAAGGTGGAAT+TGG - chr7_1:66369954-66369973 Msa1031650:intron 35.0%
! CTTTACAGTCCATTCTAAAG+TGG + chr7_1:66370030-66370049 None:intergenic 35.0%
!! CACTTTAGAATGGACTGTAA+AGG - chr7_1:66370028-66370047 Msa1031650:intron 35.0%
! TTGTACCTGTAAAGCATCAA+TGG + chr7_1:66370069-66370088 None:intergenic 35.0%
CGGAAGCTAATTATACGTTA+AGG + chr7_1:66370218-66370237 None:intergenic 35.0%
! TAGCTTTTGCATTTTCACGT+TGG + chr7_1:66370285-66370304 None:intergenic 35.0%
! TAGAAATTGTCACTTCAAGC+TGG - chr7_1:66370303-66370322 Msa1031650:CDS 35.0%
GTATGATGAAACTGGTGATT+CGG + chr7_1:66370384-66370403 None:intergenic 35.0%
GCTAAATGGTATGATGAAAC+TGG + chr7_1:66370392-66370411 None:intergenic 35.0%
! TTGGTTAGAGTAACAGGTTT+TGG + chr7_1:66370620-66370639 None:intergenic 35.0%
!! ATAGCATTGGTTAGAGTAAC+AGG + chr7_1:66370626-66370645 None:intergenic 35.0%
TGGAGTCAAGATTTGAAAAG+GGG + chr7_1:66370738-66370757 None:intergenic 35.0%
GATGGAGTCAAGATTTGAAA+AGG + chr7_1:66370740-66370759 None:intergenic 35.0%
!! TGAAATCAACCTTTGAGACT+CGG + chr7_1:66370777-66370796 None:intergenic 35.0%
CTCTACTCATCTTATTCTCA+AGG + chr7_1:66370862-66370881 None:intergenic 35.0%
!! TTCTGGAACGATTTACATTG+TGG - chr7_1:66371114-66371133 Msa1031650:CDS 35.0%
TTTCTACAGGGTGATAAGAA+TGG - chr7_1:66371232-66371251 Msa1031650:CDS 35.0%
TTCTACAGGGTGATAAGAAT+GGG - chr7_1:66371233-66371252 Msa1031650:CDS 35.0%
GTTCCATGTCAGACAAATAT+GGG - chr7_1:66371285-66371304 Msa1031650:CDS 35.0%
! AGAAGTAGTTTTCATCATCG+GGG + chr7_1:66371669-66371688 None:intergenic 35.0%
! GAGAAGTAGTTTTCATCATC+GGG + chr7_1:66371670-66371689 None:intergenic 35.0%
!! CCATTTTGGCCTTTTTTCCT+TGG + chr7_1:66369375-66369394 None:intergenic 40.0%
CCAAGGAAAAAAGGCCAAAA+TGG - chr7_1:66369372-66369391 Msa1031650:three_prime_UTR 40.0%
TTGAACTCATGGCTTACTCT+TGG + chr7_1:66369470-66369489 None:intergenic 40.0%
AATTTCTCATTGAGTGCCTC+AGG + chr7_1:66369744-66369763 None:intergenic 40.0%
! GAGGCACTCAATGAGAAATT+TGG - chr7_1:66369744-66369763 Msa1031650:CDS 40.0%
!! TTGGAAAGATGATGGACTTG+AGG - chr7_1:66369893-66369912 Msa1031650:intron 40.0%
GGTCTTTACAAAGCTAAAGG+TGG - chr7_1:66369948-66369967 Msa1031650:intron 40.0%
AGCTAAAGGTGGAATTGGTT+TGG - chr7_1:66369959-66369978 Msa1031650:intron 40.0%
! TGCTTCCTTCCACTTTAGAA+TGG - chr7_1:66370018-66370037 Msa1031650:intron 40.0%
!! ACAGTCCATTCTAAAGTGGA+AGG + chr7_1:66370026-66370045 None:intergenic 40.0%
TGATGCCATTGATGCTTTAC+AGG - chr7_1:66370061-66370080 Msa1031650:intron 40.0%
CTTGGCTAGAAGTGATTCTA+GGG + chr7_1:66370181-66370200 None:intergenic 40.0%
ACTTGGCTAGAAGTGATTCT+AGG + chr7_1:66370182-66370201 None:intergenic 40.0%
TCACTTCTAGCCAAGTTTCT+TGG - chr7_1:66370186-66370205 Msa1031650:CDS 40.0%
TCAACCTGCAGAAAAGTGAA+TGG + chr7_1:66370503-66370522 None:intergenic 40.0%
ATTTAAGAGAAGAGGTGGTG+CGG - chr7_1:66370661-66370680 Msa1031650:intron 40.0%
ATTTGAAAAGGGGAAGCAAG+AGG + chr7_1:66370728-66370747 None:intergenic 40.0%
! TCGGTTTTCATTGCTTCTGA+TGG + chr7_1:66370758-66370777 None:intergenic 40.0%
CAATGAAAACCGAGTCTCAA+AGG - chr7_1:66370765-66370784 Msa1031650:intron 40.0%
ACCTCCCAAAGAAAGAACAA+AGG - chr7_1:66370892-66370911 Msa1031650:intron 40.0%
!! TATGCGTACCGATTAAGTTC+TGG - chr7_1:66371097-66371116 Msa1031650:CDS 40.0%
GGTGATAAGAATGGGATTTG+AGG - chr7_1:66371241-66371260 Msa1031650:CDS 40.0%
ATTTGTCTGACATGGAACCA+GGG + chr7_1:66371283-66371302 None:intergenic 40.0%
TATTTGTCTGACATGGAACC+AGG + chr7_1:66371284-66371303 None:intergenic 40.0%
GGTTCCATGTCAGACAAATA+TGG - chr7_1:66371284-66371303 Msa1031650:CDS 40.0%
CATGTCAGACAAATATGGGA+GGG - chr7_1:66371289-66371308 Msa1031650:CDS 40.0%
! AGGGACTATTTTGTATGCAC+TGG - chr7_1:66371308-66371327 Msa1031650:CDS 40.0%
AATCCTGGTGAAGAATTCAG+AGG - chr7_1:66371362-66371381 Msa1031650:CDS 40.0%
!! AGTTTGTGTGTTTCTGAAGC+AGG - chr7_1:66371511-66371530 Msa1031650:five_prime_UTR 40.0%
!! CCATTTTGGCCTTTTTTCCT+TGG + chr7_1:66369375-66369394 None:intergenic 40.0%
CCAAGGAAAAAAGGCCAAAA+TGG - chr7_1:66369372-66369391 Msa1031650:three_prime_UTR 40.0%
TTGAACTCATGGCTTACTCT+TGG + chr7_1:66369470-66369489 None:intergenic 40.0%
AATTTCTCATTGAGTGCCTC+AGG + chr7_1:66369744-66369763 None:intergenic 40.0%
! GAGGCACTCAATGAGAAATT+TGG - chr7_1:66369744-66369763 Msa1031650:CDS 40.0%
!! TTGGAAAGATGATGGACTTG+AGG - chr7_1:66369893-66369912 Msa1031650:intron 40.0%
GGTCTTTACAAAGCTAAAGG+TGG - chr7_1:66369948-66369967 Msa1031650:intron 40.0%
AGCTAAAGGTGGAATTGGTT+TGG - chr7_1:66369959-66369978 Msa1031650:intron 40.0%
! TGCTTCCTTCCACTTTAGAA+TGG - chr7_1:66370018-66370037 Msa1031650:intron 40.0%
!! ACAGTCCATTCTAAAGTGGA+AGG + chr7_1:66370026-66370045 None:intergenic 40.0%
TGATGCCATTGATGCTTTAC+AGG - chr7_1:66370061-66370080 Msa1031650:intron 40.0%
CTTGGCTAGAAGTGATTCTA+GGG + chr7_1:66370181-66370200 None:intergenic 40.0%
ACTTGGCTAGAAGTGATTCT+AGG + chr7_1:66370182-66370201 None:intergenic 40.0%
TCACTTCTAGCCAAGTTTCT+TGG - chr7_1:66370186-66370205 Msa1031650:CDS 40.0%
TCAACCTGCAGAAAAGTGAA+TGG + chr7_1:66370503-66370522 None:intergenic 40.0%
ATTTAAGAGAAGAGGTGGTG+CGG - chr7_1:66370661-66370680 Msa1031650:intron 40.0%
ATTTGAAAAGGGGAAGCAAG+AGG + chr7_1:66370728-66370747 None:intergenic 40.0%
! TCGGTTTTCATTGCTTCTGA+TGG + chr7_1:66370758-66370777 None:intergenic 40.0%
CAATGAAAACCGAGTCTCAA+AGG - chr7_1:66370765-66370784 Msa1031650:intron 40.0%
ACCTCCCAAAGAAAGAACAA+AGG - chr7_1:66370892-66370911 Msa1031650:intron 40.0%
!! TATGCGTACCGATTAAGTTC+TGG - chr7_1:66371097-66371116 Msa1031650:CDS 40.0%
GGTGATAAGAATGGGATTTG+AGG - chr7_1:66371241-66371260 Msa1031650:CDS 40.0%
ATTTGTCTGACATGGAACCA+GGG + chr7_1:66371283-66371302 None:intergenic 40.0%
TATTTGTCTGACATGGAACC+AGG + chr7_1:66371284-66371303 None:intergenic 40.0%
GGTTCCATGTCAGACAAATA+TGG - chr7_1:66371284-66371303 Msa1031650:CDS 40.0%
CATGTCAGACAAATATGGGA+GGG - chr7_1:66371289-66371308 Msa1031650:CDS 40.0%
! AGGGACTATTTTGTATGCAC+TGG - chr7_1:66371308-66371327 Msa1031650:CDS 40.0%
AATCCTGGTGAAGAATTCAG+AGG - chr7_1:66371362-66371381 Msa1031650:CDS 40.0%
!! AGTTTGTGTGTTTCTGAAGC+AGG - chr7_1:66371511-66371530 Msa1031650:five_prime_UTR 40.0%
ACTCATGGCTTACTCTTGGA+TGG + chr7_1:66369466-66369485 None:intergenic 45.0%
! AGCGATTGATTCTGTGTGGA+AGG + chr7_1:66369504-66369523 None:intergenic 45.0%
! GTCAAGCGATTGATTCTGTG+TGG + chr7_1:66369508-66369527 None:intergenic 45.0%
TGTAGTTGTAGCAGCTGAAG+AGG + chr7_1:66369706-66369725 None:intergenic 45.0%
AACACCTCTTTCAACTCCTG+AGG - chr7_1:66369725-66369744 Msa1031650:CDS 45.0%
AAGGCAGAAGCCAAGAAACT+TGG + chr7_1:66370199-66370218 None:intergenic 45.0%
!! TTTCACGTTGGAGAGTGCTT+TGG + chr7_1:66370273-66370292 None:intergenic 45.0%
!! GCTTCCATTCACTTTTCTGC+AGG - chr7_1:66370496-66370515 Msa1031650:CDS 45.0%
CATGAACCTGGCTTCAATTC+AGG + chr7_1:66370812-66370831 None:intergenic 45.0%
CTGAATTGAAGCCAGGTTCA+TGG - chr7_1:66370810-66370829 Msa1031650:intron 45.0%
GCCTTTGTTCTTTCTTTGGG+AGG + chr7_1:66370896-66370915 None:intergenic 45.0%
TGGACACGTGACCAAACATT+TGG - chr7_1:66371134-66371153 Msa1031650:CDS 45.0%
! AGGGACGTGAGATTTTCTAC+AGG - chr7_1:66371219-66371238 Msa1031650:CDS 45.0%
! GGGACGTGAGATTTTCTACA+GGG - chr7_1:66371220-66371239 Msa1031650:CDS 45.0%
GATATTTACGTGTCAAGCCC+TGG - chr7_1:66371263-66371282 Msa1031650:CDS 45.0%
CCTCCCATATTTGTCTGACA+TGG + chr7_1:66371291-66371310 None:intergenic 45.0%
CCATGTCAGACAAATATGGG+AGG - chr7_1:66371288-66371307 Msa1031650:CDS 45.0%
CACTGGTCCTGCTTCAATAT+TGG - chr7_1:66371325-66371344 Msa1031650:CDS 45.0%
ACAGGCTCCAATATTGAAGC+AGG + chr7_1:66371335-66371354 None:intergenic 45.0%
GCAAGAAAGGGTGAAAGGAA+AGG + chr7_1:66371460-66371479 None:intergenic 45.0%
AGAGAGCAAGAAAGGGTGAA+AGG + chr7_1:66371465-66371484 None:intergenic 45.0%
CATTGAATCCCTGAGCACTT+TGG - chr7_1:66371641-66371660 Msa1031650:five_prime_UTR 45.0%
ACTCATGGCTTACTCTTGGA+TGG + chr7_1:66369466-66369485 None:intergenic 45.0%
! AGCGATTGATTCTGTGTGGA+AGG + chr7_1:66369504-66369523 None:intergenic 45.0%
! GTCAAGCGATTGATTCTGTG+TGG + chr7_1:66369508-66369527 None:intergenic 45.0%
TGTAGTTGTAGCAGCTGAAG+AGG + chr7_1:66369706-66369725 None:intergenic 45.0%
AACACCTCTTTCAACTCCTG+AGG - chr7_1:66369725-66369744 Msa1031650:CDS 45.0%
AAGGCAGAAGCCAAGAAACT+TGG + chr7_1:66370199-66370218 None:intergenic 45.0%
!! TTTCACGTTGGAGAGTGCTT+TGG + chr7_1:66370273-66370292 None:intergenic 45.0%
!! GCTTCCATTCACTTTTCTGC+AGG - chr7_1:66370496-66370515 Msa1031650:CDS 45.0%
CATGAACCTGGCTTCAATTC+AGG + chr7_1:66370812-66370831 None:intergenic 45.0%
CTGAATTGAAGCCAGGTTCA+TGG - chr7_1:66370810-66370829 Msa1031650:intron 45.0%
GCCTTTGTTCTTTCTTTGGG+AGG + chr7_1:66370896-66370915 None:intergenic 45.0%
TGGACACGTGACCAAACATT+TGG - chr7_1:66371134-66371153 Msa1031650:CDS 45.0%
! AGGGACGTGAGATTTTCTAC+AGG - chr7_1:66371219-66371238 Msa1031650:CDS 45.0%
! GGGACGTGAGATTTTCTACA+GGG - chr7_1:66371220-66371239 Msa1031650:CDS 45.0%
GATATTTACGTGTCAAGCCC+TGG - chr7_1:66371263-66371282 Msa1031650:CDS 45.0%
CCTCCCATATTTGTCTGACA+TGG + chr7_1:66371291-66371310 None:intergenic 45.0%
CCATGTCAGACAAATATGGG+AGG - chr7_1:66371288-66371307 Msa1031650:CDS 45.0%
CACTGGTCCTGCTTCAATAT+TGG - chr7_1:66371325-66371344 Msa1031650:CDS 45.0%
ACAGGCTCCAATATTGAAGC+AGG + chr7_1:66371335-66371354 None:intergenic 45.0%
GCAAGAAAGGGTGAAAGGAA+AGG + chr7_1:66371460-66371479 None:intergenic 45.0%
AGAGAGCAAGAAAGGGTGAA+AGG + chr7_1:66371465-66371484 None:intergenic 45.0%
CATTGAATCCCTGAGCACTT+TGG - chr7_1:66371641-66371660 Msa1031650:five_prime_UTR 45.0%
AGTGCCTCAGGAGTTGAAAG+AGG + chr7_1:66369732-66369751 None:intergenic 50.0%
! GGAAGCAACTCTTTTGCACC+AGG + chr7_1:66370005-66370024 None:intergenic 50.0%
TGCCATGCTCACAGGATAGA+GGG + chr7_1:66370570-66370589 None:intergenic 50.0%
TTGCCATGCTCACAGGATAG+AGG + chr7_1:66370571-66370590 None:intergenic 50.0%
AGAGGTGGTGCGGCAATTAA+AGG - chr7_1:66370671-66370690 Msa1031650:intron 50.0%
GAAAAGGGGAAGCAAGAGGA+GGG + chr7_1:66370724-66370743 None:intergenic 50.0%
TGAAAAGGGGAAGCAAGAGG+AGG + chr7_1:66370725-66370744 None:intergenic 50.0%
CCTTGTTGAGTCCATGAACC+TGG + chr7_1:66370824-66370843 None:intergenic 50.0%
CCAGGTTCATGGACTCAACA+AGG - chr7_1:66370821-66370840 Msa1031650:intron 50.0%
TCACCAGGATTCACAGTCAC+AGG + chr7_1:66371353-66371372 None:intergenic 50.0%
GCTCCTCTGAATTCTTCACC+AGG + chr7_1:66371368-66371387 None:intergenic 50.0%
AGTGCCTCAGGAGTTGAAAG+AGG + chr7_1:66369732-66369751 None:intergenic 50.0%
! GGAAGCAACTCTTTTGCACC+AGG + chr7_1:66370005-66370024 None:intergenic 50.0%
TGCCATGCTCACAGGATAGA+GGG + chr7_1:66370570-66370589 None:intergenic 50.0%
TTGCCATGCTCACAGGATAG+AGG + chr7_1:66370571-66370590 None:intergenic 50.0%
AGAGGTGGTGCGGCAATTAA+AGG - chr7_1:66370671-66370690 Msa1031650:intron 50.0%
GAAAAGGGGAAGCAAGAGGA+GGG + chr7_1:66370724-66370743 None:intergenic 50.0%
TGAAAAGGGGAAGCAAGAGG+AGG + chr7_1:66370725-66370744 None:intergenic 50.0%
CCTTGTTGAGTCCATGAACC+TGG + chr7_1:66370824-66370843 None:intergenic 50.0%
CCAGGTTCATGGACTCAACA+AGG - chr7_1:66370821-66370840 Msa1031650:intron 50.0%
TCACCAGGATTCACAGTCAC+AGG + chr7_1:66371353-66371372 None:intergenic 50.0%
GCTCCTCTGAATTCTTCACC+AGG + chr7_1:66371368-66371387 None:intergenic 50.0%
!! AGCTGGACGTGAGAGTGCTT+TGG - chr7_1:66370320-66370339 Msa1031650:CDS 55.0%
GTCCCTCTATCCTGTGAGCA+TGG - chr7_1:66370565-66370584 Msa1031650:intron 55.0%
ACTGCTGTTGCCATGCTCAC+AGG + chr7_1:66370578-66370597 None:intergenic 55.0%
AGGGTGTGAGCAGTATGAGC+AGG + chr7_1:66370705-66370724 None:intergenic 55.0%
GCTGAGCCTGAATTGAAGCC+AGG - chr7_1:66370803-66370822 Msa1031650:intron 55.0%
GAGCCTGTGACTGTGAATCC+TGG - chr7_1:66371347-66371366 Msa1031650:CDS 55.0%
! TCGGGGAACCAAAGTGCTCA+GGG + chr7_1:66371652-66371671 None:intergenic 55.0%
! ATCGGGGAACCAAAGTGCTC+AGG + chr7_1:66371653-66371672 None:intergenic 55.0%
!! AGCTGGACGTGAGAGTGCTT+TGG - chr7_1:66370320-66370339 Msa1031650:CDS 55.0%
GTCCCTCTATCCTGTGAGCA+TGG - chr7_1:66370565-66370584 Msa1031650:intron 55.0%
ACTGCTGTTGCCATGCTCAC+AGG + chr7_1:66370578-66370597 None:intergenic 55.0%
AGGGTGTGAGCAGTATGAGC+AGG + chr7_1:66370705-66370724 None:intergenic 55.0%
GCTGAGCCTGAATTGAAGCC+AGG - chr7_1:66370803-66370822 Msa1031650:intron 55.0%
GAGCCTGTGACTGTGAATCC+TGG - chr7_1:66371347-66371366 Msa1031650:CDS 55.0%
! TCGGGGAACCAAAGTGCTCA+GGG + chr7_1:66371652-66371671 None:intergenic 55.0%
! ATCGGGGAACCAAAGTGCTC+AGG + chr7_1:66371653-66371672 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 66369372 66371689 66369372 ID=Msa1031650;Name=Msa1031650
chr7_1 mRNA 66369372 66371689 66369372 ID=Msa1031650-mRNA-1;Parent=Msa1031650;Name=Msa1031650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=282|1|1|1|1|1|3|271|355
chr7_1 exon 66369372 66369840 66369372 ID=Msa1031650-mRNA-1:exon:14902;Parent=Msa1031650-mRNA-1
chr7_1 exon 66370103 66370543 66370103 ID=Msa1031650-mRNA-1:exon:14901;Parent=Msa1031650-mRNA-1
chr7_1 exon 66370979 66371689 66370979 ID=Msa1031650-mRNA-1:exon:14900;Parent=Msa1031650-mRNA-1
chr7_1 five_prime_UTR 66371408 66371689 66371408 ID=Msa1031650-mRNA-1:five_prime_utr;Parent=Msa1031650-mRNA-1
chr7_1 CDS 66370979 66371407 66370979 ID=Msa1031650-mRNA-1:cds;Parent=Msa1031650-mRNA-1
chr7_1 CDS 66370103 66370543 66370103 ID=Msa1031650-mRNA-1:cds;Parent=Msa1031650-mRNA-1
chr7_1 CDS 66369643 66369840 66369643 ID=Msa1031650-mRNA-1:cds;Parent=Msa1031650-mRNA-1
chr7_1 three_prime_UTR 66369372 66369642 66369372 ID=Msa1031650-mRNA-1:three_prime_utr;Parent=Msa1031650-mRNA-1
Gene Sequence

>Msa1031650

ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAACTAAACTTAATAAAAGCCTCTTCAGCTGCTACAACTACAACACCTCTTTCAACTCCTGAGGCACTCAATGAGAAATTTGGAAGAAAAGGCATCAAATTCTTGGAGTCTAATAGCATTCCCATTGTTGAGCTAACAGTTAGAAATGGAAGCTCATTGAGCTTAAGATTACCTGATGCTCATGTAACATCTTACAAACCAAAAGTGTTTTGGAAAGATGATGGACTTGAGGAGCTTCTTTACACAATTTCTGCCAATGAAACAGGTCTTTACAAAGCTAAAGGTGGAATTGGTTTGGTCTTGAATGAAGTATTACAACCTGGTGCAAAAGAGTTGCTTCCTTCCACTTTAGAATGGACTGTAAAGGATGTTGACTATGATGCCATTGATGCTTTACAGGTTGAATTGATCAGCACTAATAAATTTTTTGACATGACTTATATTGTGTCCCTCTATCCTGTGAGCATGGCAACAGCAGTTATAGTTAAGAACAAATCTCCAAAACCTGTTACTCTAACCAATGCTATATTAAGCCATTTTAGATTTAAGAGAAGAGGTGGTGCGGCAATTAAAGGTCTTCAAACCTGCTCATACTGCTCACACCCTCCTCTTGCTTCCCCTTTTCAAATCTTGACTCCATCAGAAGCAATGAAAACCGAGTCTCAAAGGTTGATTTCATTTGGTGCTGAGCCTGAATTGAAGCCAGGTTCATGGACTCAACAAGGTGTTCCTATTACTCTCCTTGAGAATAAGATGAGTAGAGTTTTTGCTGCACCTCCCAAAGAAAGAACAAAGGCTTTTTATAACACACCGCCTTCAAAATATGAAATCATTGATCAGGGACGTGAGATTTTCTACAGGGTGATAAGAATGGGATTTGAGGATATTTACGTGTCAAGCCCTGGTTCCATGTCAGACAAATATGGGAGGGACTATTTTGTATGCACTGGTCCTGCTTCAATATTGGAGCCTGTGACTGTGAATCCTGGTGAAGAATTCAGAGGAGCACAAGTTATTGAGCATGATAATCTCTCATAA

Protein sequence

>Msa1031650

MASFLSLSLPKLNLIKASSAATTTTPLSTPEALNEKFGRKGIKFLESNSIPIVELTVRNGSSLSLRLPDAHVTSYKPKVFWKDDGLEELLYTISANETGLYKAKGGIGLVLNEVLQPGAKELLPSTLEWTVKDVDYDAIDALQVELISTNKFFDMTYIVSLYPVSMATAVIVKNKSPKPVTLTNAILSHFRFKRRGGAAIKGLQTCSYCSHPPLASPFQILTPSEAMKTESQRLISFGAEPELKPGSWTQQGVPITLLENKMSRVFAAPPKERTKAFYNTPPSKYEIIDQGREIFYRVIRMGFEDIYVSSPGSMSDKYGRDYFVCTGPASILEPVTVNPGEEFRGAQVIEHDNLS*