AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0415930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415930 MtrunA17_Chr3g0112251 96.429 224 8 0 1 224 1 224 2.24e-156 432
Msa0415930 MtrunA17_Chr5g0398981 37.398 123 71 3 101 223 106 222 2.10e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0415930 AT2G44920.2 86.286 175 24 0 50 224 50 224 1.68e-107 309
Msa0415930 AT2G44920.1 86.232 138 19 0 50 187 50 187 1.78e-79 237
Msa0415930 AT1G12250.2 34.848 132 75 4 97 223 41 166 1.20e-11 62.0
Msa0415930 AT1G12250.1 34.848 132 75 4 97 223 115 240 1.67e-11 62.8
Msa0415930 AT5G55000.2 37.838 111 65 1 94 200 174 284 4.16e-11 61.6
Msa0415930 AT5G55000.1 38.318 107 62 1 94 196 174 280 7.49e-11 60.8

Find 55 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCCTATCTCTCTGTTTC+TGG 0.179667 3_2:-62477398 Msa0415930:intron
TTTAAAGGTGCAAAATTATT+AGG 0.209764 3_2:-62476635 Msa0415930:CDS
ACTAGGGGACAAGATCTTTC+TGG 0.219620 3_2:-62476856 Msa0415930:CDS
AAATTTGAGCAATGCTAATT+TGG 0.246193 3_2:-62475842 Msa0415930:CDS
CATACCGGCGCCTGTAATAT+TGG 0.263857 3_2:+62475780 None:intergenic
TTCTTTGATGCTGATTTAAC+AGG 0.300432 3_2:-62476605 Msa0415930:intron
AAAATTGGCTTGACGCAGTA+TGG 0.314554 3_2:+62476655 None:intergenic
TTTAAGGGATCCAATATTAC+AGG 0.328394 3_2:-62475790 Msa0415930:CDS
TGATCCTGCACTTGCATTCA+AGG 0.342254 3_2:-62477178 Msa0415930:intron
GATGCTTGGTGAGTTTGCTT+TGG 0.375494 3_2:+62477282 None:intergenic
TAAGAGATGGTGATGAGGTT+TGG 0.381918 3_2:+62477453 None:intergenic
CATATGGTCAAGGAGTTACT+AGG 0.385923 3_2:-62476873 Msa0415930:CDS
TGGTGATGAATGCAGGGTGG+AGG 0.398777 3_2:-62476898 Msa0415930:intron
CTAGTAACTCCTTGACCATA+TGG 0.403791 3_2:+62476874 None:intergenic
CATGTCAGGTGCTGATCTTT+CGG 0.407019 3_2:-62476490 Msa0415930:intron
TTGGAAGGTGCACTTGTAAC+GGG 0.417101 3_2:-62475823 Msa0415930:CDS
CTAGGGGACAAGATCTTTCT+GGG 0.423220 3_2:-62476855 Msa0415930:CDS
CGAACCAGAAACAGAGAGAT+AGG 0.437434 3_2:+62477394 None:intergenic
GACAGAGTGAACTCATCAAC+TGG 0.437998 3_2:-62472748 Msa0415930:intron
AACCTCATCACCATCTCTTA+AGG 0.447203 3_2:-62477450 Msa0415930:CDS
AGAGATAGGAGTTGGTGAGC+AGG 0.464069 3_2:+62477408 None:intergenic
ATGCAGGGTGGAGGGCCATA+TGG 0.478492 3_2:-62476889 Msa0415930:intron
TTACCTTTGTCACATTTGCC+AGG 0.489767 3_2:+62476439 None:intergenic
AGTTGGTGAGCAGGTTGAAG+AGG 0.491050 3_2:+62477417 None:intergenic
GGTGAGCAGGTTGAAGAGGA+AGG 0.497485 3_2:+62477421 None:intergenic
CAGAAACTCACATTATCATT+CGG 0.504813 3_2:-62477258 Msa0415930:CDS
TTTGGAAGGTGCACTTGTAA+CGG 0.505123 3_2:-62475824 Msa0415930:CDS
TTGAGCAATGCTAATTTGGA+AGG 0.506866 3_2:-62475838 Msa0415930:CDS
ATCAATCTATCATGCGGATG+TGG 0.515784 3_2:+62477560 None:intergenic
TACCTCTGCAAAATTGCTGA+TGG 0.538634 3_2:-62472854 Msa0415930:CDS
AATTGCACAGCAATGTATCA+CGG 0.554496 3_2:+62472716 None:intergenic
ACCTCTGCAAAATTGCTGAT+GGG 0.554917 3_2:-62472853 Msa0415930:intron
AGAAACAGAGAGATAGGAGT+TGG 0.558423 3_2:+62477400 None:intergenic
TGATGAGGTTTGGAAGTTGA+AGG 0.562107 3_2:+62477463 None:intergenic
ATATGGTCAAGGAGTTACTA+GGG 0.565044 3_2:-62476872 Msa0415930:CDS
TATACCTTGAATGCAAGTGC+AGG 0.570494 3_2:+62477174 None:intergenic
GGTGATGAATGCAGGGTGGA+GGG 0.574556 3_2:-62476897 Msa0415930:intron
TATAATGTATATCATGTCAA+AGG 0.577746 3_2:-62472625 Msa0415930:three_prime_UTR
ATTGCACAGCAATGTATCAC+GGG 0.579298 3_2:+62472717 None:intergenic
GGATCCAATATTACAGGCGC+CGG 0.582010 3_2:-62475784 Msa0415930:intron
GGTGGAGGGCCATATGGTCA+AGG 0.584439 3_2:-62476883 Msa0415930:CDS
TACCTTTGTCACATTTGCCA+GGG 0.587787 3_2:+62476440 None:intergenic
TTCCCTGGCAAATGTGACAA+AGG 0.601317 3_2:-62476442 Msa0415930:intron
ATGCGGATGTGGAATTATTG+TGG 0.607522 3_2:+62477571 None:intergenic
ATGTGAGTTTCTGAGATGCT+TGG 0.612261 3_2:+62477268 None:intergenic
CTTTCTGGGAAAGATTTCAG+TGG 0.615907 3_2:-62476841 Msa0415930:CDS
TTTGGAAGTTGAAGGCAAAG+AGG 0.617513 3_2:+62477471 None:intergenic
CATCAAGCAAGACTTCAAAA+CGG 0.635311 3_2:-62476809 Msa0415930:intron
AAGGTGTTGACCTTAAGAGA+TGG 0.643063 3_2:+62477440 None:intergenic
GACCTTAAGAGATGGTGATG+AGG 0.653487 3_2:+62477448 None:intergenic
TAGCTGTAACTATCCAACAA+TGG 0.657950 3_2:-62477509 Msa0415930:exon
ACACATATCAATCTATCATG+CGG 0.666603 3_2:+62477554 None:intergenic
GCACAGCAATGTATCACGGG+TGG 0.671947 3_2:+62472720 None:intergenic
TCACGTTGATCTTCTCTGAG+CGG 0.674168 3_2:+62472878 None:intergenic
TATGGTCAAGGAGTTACTAG+GGG 0.721516 3_2:-62476871 Msa0415930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAAGAAATTAAATTAAAA+TGG - chr3_2:62474014-62474033 Msa0415930:intron 10.0%
!! TTATAATTAATAGCAAAATA+AGG + chr3_2:62475090-62475109 None:intergenic 10.0%
!!! TTTTTGAAACAAAATATTAA+AGG - chr3_2:62476368-62476387 Msa0415930:intron 10.0%
!! ATATATATTATATGTCTAAA+TGG - chr3_2:62477292-62477311 Msa0415930:CDS 10.0%
!!! TTTTTTGGTTAACAAATAAT+GGG - chr3_2:62473190-62473209 Msa0415930:intron 15.0%
!! GTTAATAAACTGAATTATAT+TGG + chr3_2:62473797-62473816 None:intergenic 15.0%
!! TATAAGTATAACTGTTTATT+AGG + chr3_2:62473941-62473960 None:intergenic 15.0%
!! TTCTTCAAATAATATAACAA+AGG + chr3_2:62473968-62473987 None:intergenic 15.0%
!!! TAATTTCTTAACATTCTTTT+GGG + chr3_2:62474006-62474025 None:intergenic 15.0%
!!! TTAATTTCTTAACATTCTTT+TGG + chr3_2:62474007-62474026 None:intergenic 15.0%
!! TAGTTATGTTAATTAGTTAA+AGG - chr3_2:62474491-62474510 Msa0415930:intron 15.0%
!! CAACTTATATAAAAATACTA+GGG - chr3_2:62474550-62474569 Msa0415930:intron 15.0%
!! AACTTATATAAAAATACTAG+GGG - chr3_2:62474551-62474570 Msa0415930:intron 15.0%
!!! ATCAAAAAAAGTTTTTTGTT+TGG - chr3_2:62475236-62475255 Msa0415930:intron 15.0%
!!! TATTAAATCTAATTCAAGTT+GGG + chr3_2:62475982-62476001 None:intergenic 15.0%
!! ATATTAAATCTAATTCAAGT+TGG + chr3_2:62475983-62476002 None:intergenic 15.0%
!! AACTTGAATTAGATTTAATA+TGG - chr3_2:62475982-62476001 Msa0415930:intron 15.0%
!! ACAATTGAAGAAAAATTATA+AGG + chr3_2:62476529-62476548 None:intergenic 15.0%
!!! GTTAAAGTTTTGTTCTTTTT+TGG - chr3_2:62473175-62473194 Msa0415930:intron 20.0%
!!! CTTTTTTGGTTAACAAATAA+TGG - chr3_2:62473189-62473208 Msa0415930:intron 20.0%
!!! TAATTTTGCACCTTTAAAAT+TGG + chr3_2:62473481-62473500 None:intergenic 20.0%
!!! TTTAAAGGTGCAAAATTATT+AGG - chr3_2:62473483-62473502 Msa0415930:intron 20.0%
!!! TTTATTAGGTTGTTGAATAA+TGG + chr3_2:62473927-62473946 None:intergenic 20.0%
!! ATATTATTCTATGCTACTAT+TGG - chr3_2:62474374-62474393 Msa0415930:intron 20.0%
!!! CCTAGTATTTTTATATAAGT+TGG + chr3_2:62474552-62474571 None:intergenic 20.0%
!! CCAACTTATATAAAAATACT+AGG - chr3_2:62474549-62474568 Msa0415930:intron 20.0%
!! TCATCTAAGTTATGAATATA+TGG + chr3_2:62474784-62474803 None:intergenic 20.0%
!!! TTATGCTTTTGGATTTATTT+TGG - chr3_2:62474922-62474941 Msa0415930:intron 20.0%
!!! ATTTTGGTTTGGATTTATTT+TGG - chr3_2:62474938-62474957 Msa0415930:intron 20.0%
!!! TTATGTTTTTCGATTTATCT+TGG - chr3_2:62474969-62474988 Msa0415930:intron 20.0%
!!! TTATCCTTTTGGATTTAATT+TGG - chr3_2:62475022-62475041 Msa0415930:intron 20.0%
!!! AAAAAAAGTTTTTTGTTTGG+CGG - chr3_2:62475239-62475258 Msa0415930:intron 20.0%
!! TTACTAATTCTATTAAGATC+AGG + chr3_2:62475561-62475580 None:intergenic 20.0%
!!! AGTAAACTTGCAATAAATTT+TGG - chr3_2:62475804-62475823 Msa0415930:CDS 20.0%
!! AATAATAGAACTAGCAATTA+GGG + chr3_2:62476307-62476326 None:intergenic 20.0%
!! AAATAATAGAACTAGCAATT+AGG + chr3_2:62476308-62476327 None:intergenic 20.0%
!! ATAAGAAAGTAAATTCAATG+TGG + chr3_2:62476918-62476937 None:intergenic 20.0%
!! ACATTGAATTTACTTTCTTA+TGG - chr3_2:62476917-62476936 Msa0415930:intron 20.0%
!! TATAATGTATATCATGTCAA+AGG - chr3_2:62477493-62477512 Msa0415930:CDS 20.0%
! AAACATTCATATTGAAGTGT+TGG + chr3_2:62472990-62473009 None:intergenic 25.0%
! CTTCAATATGAATGTTTATC+TGG - chr3_2:62472993-62473012 Msa0415930:intron 25.0%
!!! AGTTTAAGTTGATTTGATGA+CGG - chr3_2:62473367-62473386 Msa0415930:intron 25.0%
!! CATTCATTGTGATACATTTT+TGG + chr3_2:62473550-62473569 None:intergenic 25.0%
!! TTTTTCATGCTCATTATGAT+AGG - chr3_2:62473706-62473725 Msa0415930:intron 25.0%
! ACTGAATTATATTGGACTAA+GGG + chr3_2:62473789-62473808 None:intergenic 25.0%
! AACTGAATTATATTGGACTA+AGG + chr3_2:62473790-62473809 None:intergenic 25.0%
! ATAACAACAAAGCAAAGAAA+AGG + chr3_2:62473827-62473846 None:intergenic 25.0%
!!! ATTAAGCAAAGTTTTGAACA+AGG + chr3_2:62473853-62473872 None:intergenic 25.0%
! TCAGCTAAATTAATACTTGT+AGG + chr3_2:62474163-62474182 None:intergenic 25.0%
! TTGTTAATTACAGTGATTTG+AGG + chr3_2:62474199-62474218 None:intergenic 25.0%
! CAACACAATAAATTGAGAAA+TGG + chr3_2:62474235-62474254 None:intergenic 25.0%
! CATTTCTCAATTTATTGTGT+TGG - chr3_2:62474233-62474252 Msa0415930:intron 25.0%
! AAATTTGAGCAATGCTAATT+TGG - chr3_2:62474276-62474295 Msa0415930:intron 25.0%
!! ATGCTACTATTGGAATTTTA+AGG - chr3_2:62474384-62474403 Msa0415930:intron 25.0%
!! TGCTACTATTGGAATTTTAA+GGG - chr3_2:62474385-62474404 Msa0415930:intron 25.0%
!!! ATTAGCTTTCAAATCATTGA+AGG - chr3_2:62474433-62474452 Msa0415930:intron 25.0%
!!! TATTGACATAGAACTGATTT+TGG - chr3_2:62474519-62474538 Msa0415930:intron 25.0%
! TTATATAAAAATACTAGGGG+TGG - chr3_2:62474554-62474573 Msa0415930:intron 25.0%
!! TTATGCTTTTGGATTTATCT+TGG - chr3_2:62474873-62474892 Msa0415930:intron 25.0%
!!! TGAGACTTATTTTATGCTTT+TGG - chr3_2:62474911-62474930 Msa0415930:intron 25.0%
!!! CTTTTGGATTTATTTTGGTT+TGG - chr3_2:62474927-62474946 Msa0415930:intron 25.0%
!!! TGAGACTTATTTTATCCTTT+TGG - chr3_2:62475011-62475030 Msa0415930:intron 25.0%
! ACAACCAAATTAAATCCAAA+AGG + chr3_2:62475029-62475048 None:intergenic 25.0%
!!! TTTGGATTTAATTTGGTTGT+TGG - chr3_2:62475029-62475048 Msa0415930:intron 25.0%
!!! AAAAAAGTTTTTTGTTTGGC+GGG - chr3_2:62475240-62475259 Msa0415930:intron 25.0%
!!! TGCTCCTATAGTATTTTTTA+GGG + chr3_2:62475415-62475434 None:intergenic 25.0%
!!! ATGCTCCTATAGTATTTTTT+AGG + chr3_2:62475416-62475435 None:intergenic 25.0%
!! AAAAAATACTATAGGAGCAT+AGG - chr3_2:62475416-62475435 Msa0415930:intron 25.0%
!! AAAAATACTATAGGAGCATA+GGG - chr3_2:62475417-62475436 Msa0415930:intron 25.0%
! TATTAAGATCAGGATTTACA+GGG + chr3_2:62475551-62475570 None:intergenic 25.0%
! GAATGAGAATGAATAAAACT+TGG + chr3_2:62475587-62475606 None:intergenic 25.0%
! ACCAGAAATTTCATCAAATT+AGG - chr3_2:62475612-62475631 Msa0415930:intron 25.0%
! TCCTAATTTGATGAAATTTC+TGG + chr3_2:62475616-62475635 None:intergenic 25.0%
! TAACGAACATATTTCGAATA+TGG + chr3_2:62475642-62475661 None:intergenic 25.0%
! GAAGGTAATAACAAAATGAA+GGG + chr3_2:62475777-62475796 None:intergenic 25.0%
! TATTGCAAGTTTACTAGTTA+CGG + chr3_2:62475799-62475818 None:intergenic 25.0%
! AAATTCAAAACCTTGCTTAA+GGG + chr3_2:62475895-62475914 None:intergenic 25.0%
! GTGTTAGTAGAGAAAATAAA+CGG - chr3_2:62475917-62475936 Msa0415930:intron 25.0%
!!! TTATTTTTTATGGTTCCACA+TGG - chr3_2:62476021-62476040 Msa0415930:intron 25.0%
! TTATTCTGATCTATAACCTT+CGG + chr3_2:62476059-62476078 None:intergenic 25.0%
! ATCAAAATTTAAGGATGAGT+TGG - chr3_2:62476229-62476248 Msa0415930:intron 25.0%
! TCAAAATTTAAGGATGAGTT+GGG - chr3_2:62476230-62476249 Msa0415930:intron 25.0%
!!! ATATTTTGAGTTTGAGTACA+TGG - chr3_2:62476445-62476464 Msa0415930:CDS 25.0%
! ACTGAATCAAAATTTAGCAT+TGG - chr3_2:62476640-62476659 Msa0415930:CDS 25.0%
! CTGAATCAAAATTTAGCATT+GGG - chr3_2:62476641-62476660 Msa0415930:CDS 25.0%
! TTACAAGAGAAAACTATACT+GGG + chr3_2:62476711-62476730 None:intergenic 25.0%
! TTTACAAGAGAAAACTATAC+TGG + chr3_2:62476712-62476731 None:intergenic 25.0%
! ACTCTATATCTAAGCTATTA+TGG - chr3_2:62476777-62476796 Msa0415930:intron 25.0%
! TGTTTAGTAATGTGTAGAAA+AGG + chr3_2:62476804-62476823 None:intergenic 25.0%
!!! CATTTGCTTTTCTTTCAAAA+TGG + chr3_2:62477532-62477551 None:intergenic 25.0%
!!! CAAATGTTTTGTTGCATATT+AGG - chr3_2:62477546-62477565 Msa0415930:five_prime_UTR 25.0%
ACACATATCAATCTATCATG+CGG + chr3_2:62472567-62472586 None:intergenic 30.0%
CAGAAACTCACATTATCATT+CGG - chr3_2:62472860-62472879 Msa0415930:CDS 30.0%
!! TGGTTAACAAATAATGGGTA+TGG - chr3_2:62473195-62473214 Msa0415930:intron 30.0%
!! AACAAATAATGGGTATGGTT+TGG - chr3_2:62473200-62473219 Msa0415930:intron 30.0%
!! GTTTAAGTTGATTTGATGAC+GGG - chr3_2:62473368-62473387 Msa0415930:intron 30.0%
!! TTTAAGTTGATTTGATGACG+GGG - chr3_2:62473369-62473388 Msa0415930:intron 30.0%
!! TTCTTTGATGCTGATTTAAC+AGG - chr3_2:62473513-62473532 Msa0415930:intron 30.0%
!!! TTGTGATACATTTTTGGTGT+TGG + chr3_2:62473544-62473563 None:intergenic 30.0%
ATGAATGTAGTATACACACA+TGG - chr3_2:62473563-62473582 Msa0415930:intron 30.0%
TCATTATGATAGGATCTGAT+GGG - chr3_2:62473716-62473735 Msa0415930:intron 30.0%
ATGGCAAATTAGAAGATTCA+AGG - chr3_2:62474033-62474052 Msa0415930:intron 30.0%
TGGCAAATTAGAAGATTCAA+GGG - chr3_2:62474034-62474053 Msa0415930:intron 30.0%
!!! CACTACAAGATTTTTTTGAC+AGG + chr3_2:62474101-62474120 None:intergenic 30.0%
! AACGGGAAATACATCTTTTA+AGG - chr3_2:62474312-62474331 Msa0415930:intron 30.0%
! ACGGGAAATACATCTTTTAA+GGG - chr3_2:62474313-62474332 Msa0415930:intron 30.0%
TTTAAGGGATCCAATATTAC+AGG - chr3_2:62474328-62474347 Msa0415930:intron 30.0%
ATAGTGATACTACTACATAC+CGG + chr3_2:62474356-62474375 None:intergenic 30.0%
AATTATGTTACGACGACAAT+AGG - chr3_2:62474739-62474758 Msa0415930:intron 30.0%
AACTTAGATGATGATTGACT+TGG - chr3_2:62474793-62474812 Msa0415930:intron 30.0%
!!! CCTATAGTATTTTTTAGGGA+TGG + chr3_2:62475411-62475430 None:intergenic 30.0%
CCATCCCTAAAAAATACTAT+AGG - chr3_2:62475408-62475427 Msa0415930:intron 30.0%
ATATCATGCAACCAAAAGAA+AGG - chr3_2:62475461-62475480 Msa0415930:intron 30.0%
AATCTGAATTCATCATGTCT+AGG - chr3_2:62475521-62475540 Msa0415930:intron 30.0%
ATCTGAATTCATCATGTCTA+GGG - chr3_2:62475522-62475541 Msa0415930:intron 30.0%
CTATTAAGATCAGGATTTAC+AGG + chr3_2:62475552-62475571 None:intergenic 30.0%
!! TTGATGAAATTTCTGGTTCT+AGG + chr3_2:62475609-62475628 None:intergenic 30.0%
GTTGTGTTATAAACAAAACG+TGG - chr3_2:62475703-62475722 Msa0415930:intron 30.0%
GGAAGGTAATAACAAAATGA+AGG + chr3_2:62475778-62475797 None:intergenic 30.0%
AATTCAAAACCTTGCTTAAG+GGG + chr3_2:62475894-62475913 None:intergenic 30.0%
CAAATTCAAAACCTTGCTTA+AGG + chr3_2:62475896-62475915 None:intergenic 30.0%
TAGTAGAGAAAATAAACGGT+AGG - chr3_2:62475921-62475940 Msa0415930:intron 30.0%
AAAATTCAAGCATGACGTTT+AGG - chr3_2:62476093-62476112 Msa0415930:intron 30.0%
TTATGGTCTATAGAACTGAT+CGG - chr3_2:62476206-62476225 Msa0415930:intron 30.0%
ACTGATCGGATCAAAATTTA+AGG - chr3_2:62476220-62476239 Msa0415930:intron 30.0%
CAAAATTTAAGGATGAGTTG+GGG - chr3_2:62476231-62476250 Msa0415930:intron 30.0%
AGTTCTATTATGTTGTGATG+AGG - chr3_2:62476344-62476363 Msa0415930:intron 30.0%
! ATCAAAATTTAGCATTGGGT+AGG - chr3_2:62476645-62476664 Msa0415930:CDS 30.0%
! TCAAAATTTAGCATTGGGTA+GGG - chr3_2:62476646-62476665 Msa0415930:CDS 30.0%
TTGTAAACGTATGATATCCT+TGG - chr3_2:62476725-62476744 Msa0415930:intron 30.0%
CTATAATAGATGGTAGAGTT+AGG + chr3_2:62476828-62476847 None:intergenic 30.0%
CTAACTCTACCATCTATTAT+AGG - chr3_2:62476826-62476845 Msa0415930:CDS 30.0%
TAGCTGTAACTATCCAACAA+TGG - chr3_2:62472609-62472628 Msa0415930:three_prime_UTR 35.0%
TTCAGAAAAAGAGCCATTGT+TGG + chr3_2:62472625-62472644 None:intergenic 35.0%
GACAAAACATTGACACTTGT+CGG + chr3_2:62473022-62473041 None:intergenic 35.0%
TACGAACACTAACACAAACA+CGG + chr3_2:62473098-62473117 None:intergenic 35.0%
ATATGGTCAAGGAGTTACTA+GGG - chr3_2:62473246-62473265 Msa0415930:intron 35.0%
CATCAAGCAAGACTTCAAAA+CGG - chr3_2:62473309-62473328 Msa0415930:intron 35.0%
!! TGATGCTGATTTAACAGGTT+TGG - chr3_2:62473518-62473537 Msa0415930:intron 35.0%
GGGGAGATATTGAATGTAAA+TGG + chr3_2:62473599-62473618 None:intergenic 35.0%
CTCATTATGATAGGATCTGA+TGG - chr3_2:62473715-62473734 Msa0415930:intron 35.0%
TAATAGCAGTGATTGAGAGT+AGG - chr3_2:62473869-62473888 Msa0415930:intron 35.0%
AATAGCAGTGATTGAGAGTA+GGG - chr3_2:62473870-62473889 Msa0415930:intron 35.0%
TTGAGCAATGCTAATTTGGA+AGG - chr3_2:62474280-62474299 Msa0415930:intron 35.0%
!!! TTGAACTCGCTTTTTATCGT+TGG - chr3_2:62474644-62474663 Msa0415930:intron 35.0%
ATTGTTTCCAACGAGTTAAG+CGG + chr3_2:62474722-62474741 None:intergenic 35.0%
! TGAGACTTGTCTTATGCTTT+TGG - chr3_2:62474862-62474881 Msa0415930:intron 35.0%
!!! TTTTTTAGGGATGGCAAAGT+GGG + chr3_2:62475402-62475421 None:intergenic 35.0%
!!! ATTTTTTAGGGATGGCAAAG+TGG + chr3_2:62475403-62475422 None:intergenic 35.0%
! CCATGTCTTTTCCTTTCTTT+TGG + chr3_2:62475475-62475494 None:intergenic 35.0%
CCAAAAGAAAGGAAAAGACA+TGG - chr3_2:62475472-62475491 Msa0415930:intron 35.0%
TTGTTCTGTTTCCCTCAAAT+AGG - chr3_2:62475948-62475967 Msa0415930:intron 35.0%
! ATTGAGTTTGTTCAGGTCTA+GGG - chr3_2:62476588-62476607 Msa0415930:intron 35.0%
AGCTTGTGTCCTATAATAGA+TGG + chr3_2:62476838-62476857 None:intergenic 35.0%
!!! TTTCTTATGGCTAGCTTTTC+TGG - chr3_2:62476930-62476949 Msa0415930:intron 35.0%
TTCAAGATATTAGCACTGTG+AGG - chr3_2:62477110-62477129 Msa0415930:intron 35.0%
TCAAGATATTAGCACTGTGA+GGG - chr3_2:62477111-62477130 Msa0415930:intron 35.0%
AATTGCACAGCAATGTATCA+CGG + chr3_2:62477405-62477424 None:intergenic 35.0%
ATGCGGATGTGGAATTATTG+TGG + chr3_2:62472550-62472569 None:intergenic 40.0%
ATCAATCTATCATGCGGATG+TGG + chr3_2:62472561-62472580 None:intergenic 40.0%
TTTGGAAGTTGAAGGCAAAG+AGG + chr3_2:62472650-62472669 None:intergenic 40.0%
TGATGAGGTTTGGAAGTTGA+AGG + chr3_2:62472658-62472677 None:intergenic 40.0%
! TAAGAGATGGTGATGAGGTT+TGG + chr3_2:62472668-62472687 None:intergenic 40.0%
AACCTCATCACCATCTCTTA+AGG - chr3_2:62472668-62472687 Msa0415930:three_prime_UTR 40.0%
!! AAGGTGTTGACCTTAAGAGA+TGG + chr3_2:62472681-62472700 None:intergenic 40.0%
AGAAACAGAGAGATAGGAGT+TGG + chr3_2:62472721-62472740 None:intergenic 40.0%
AACTCCTATCTCTCTGTTTC+TGG - chr3_2:62472720-62472739 Msa0415930:CDS 40.0%
!! ATGTGAGTTTCTGAGATGCT+TGG + chr3_2:62472853-62472872 None:intergenic 40.0%
TATACCTTGAATGCAAGTGC+AGG + chr3_2:62472947-62472966 None:intergenic 40.0%
! TGGTGTGTCCGTATTTTGTT+TGG - chr3_2:62473069-62473088 Msa0415930:intron 40.0%
CACGGACACCAAACAAAATA+CGG + chr3_2:62473080-62473099 None:intergenic 40.0%
!! TATGGTTTGGTGATGAATGC+AGG - chr3_2:62473213-62473232 Msa0415930:intron 40.0%
!! ATGGTTTGGTGATGAATGCA+GGG - chr3_2:62473214-62473233 Msa0415930:intron 40.0%
CTAGTAACTCCTTGACCATA+TGG + chr3_2:62473247-62473266 None:intergenic 40.0%
CATATGGTCAAGGAGTTACT+AGG - chr3_2:62473245-62473264 Msa0415930:intron 40.0%
TATGGTCAAGGAGTTACTAG+GGG - chr3_2:62473247-62473266 Msa0415930:intron 40.0%
! CTTTCTGGGAAAGATTTCAG+TGG - chr3_2:62473277-62473296 Msa0415930:intron 40.0%
! ATGACGGGGATAGTCAAATT+CGG - chr3_2:62473383-62473402 Msa0415930:intron 40.0%
!! AAAATTGGCTTGACGCAGTA+TGG + chr3_2:62473466-62473485 None:intergenic 40.0%
! CTGCGTCAAGCCAATTTTAA+AGG - chr3_2:62473468-62473487 Msa0415930:intron 40.0%
TACCTTTGTCACATTTGCCA+GGG + chr3_2:62473681-62473700 None:intergenic 40.0%
TTACCTTTGTCACATTTGCC+AGG + chr3_2:62473682-62473701 None:intergenic 40.0%
! TTTGGAAGGTGCACTTGTAA+CGG - chr3_2:62474294-62474313 Msa0415930:intron 40.0%
AAATACTAGGGGTGGCAAAA+TGG - chr3_2:62474562-62474581 Msa0415930:intron 40.0%
AATACTAGGGGTGGCAAAAT+GGG - chr3_2:62474563-62474582 Msa0415930:intron 40.0%
TTGTTTCCAACGAGTTAAGC+GGG + chr3_2:62474721-62474740 None:intergenic 40.0%
TATGTTACGACGACAATAGG+AGG - chr3_2:62474742-62474761 Msa0415930:intron 40.0%
!!! CTCGGTCACTAATTTTGACT+CGG - chr3_2:62475317-62475336 Msa0415930:intron 40.0%
!! TCGTCTCGTCTCGTTTTTAA+CGG - chr3_2:62475341-62475360 Msa0415930:intron 40.0%
!!! TCGTTTTTAACGGGCTTAGA+CGG - chr3_2:62475351-62475370 Msa0415930:intron 40.0%
ACATGGAAAGCGAGTTCTTT+GGG - chr3_2:62475489-62475508 Msa0415930:intron 40.0%
AACGTGGATGCTTATTGCAA+AGG - chr3_2:62475719-62475738 Msa0415930:intron 40.0%
GCAAGTTTACTAGTTACGGA+AGG + chr3_2:62475795-62475814 None:intergenic 40.0%
TAACATATGAGCTGCATGTC+TGG + chr3_2:62475835-62475854 None:intergenic 40.0%
! ATGGCTTTTAGATGTACCGA+AGG - chr3_2:62476040-62476059 Msa0415930:intron 40.0%
TGAAGCTTTGCTGGTCAAAT+TGG + chr3_2:62476162-62476181 None:intergenic 40.0%
AATTTGACCAGCAAAGCTTC+AGG - chr3_2:62476161-62476180 Msa0415930:intron 40.0%
! AGCAAAGCTTCAGGTTTGTT+CGG - chr3_2:62476170-62476189 Msa0415930:intron 40.0%
! ATTTAAGGATGAGTTGGGGT+TGG - chr3_2:62476235-62476254 Msa0415930:intron 40.0%
AATTAGGGATGAGAACTGAG+AGG + chr3_2:62476292-62476311 None:intergenic 40.0%
TGAACAAACTCAATGCTCTG+CGG + chr3_2:62476582-62476601 None:intergenic 40.0%
! CATTGAGTTTGTTCAGGTCT+AGG - chr3_2:62476587-62476606 Msa0415930:intron 40.0%
! TTTAGCATTGGGTAGGGAAA+AGG - chr3_2:62476652-62476671 Msa0415930:CDS 40.0%
! TTAGCATTGGGTAGGGAAAA+GGG - chr3_2:62476653-62476672 Msa0415930:CDS 40.0%
CTGGGTGAGAAAGTAGAATT+GGG + chr3_2:62476693-62476712 None:intergenic 40.0%
ACTGGGTGAGAAAGTAGAAT+TGG + chr3_2:62476694-62476713 None:intergenic 40.0%
TTGTATCTTCTCCTCAAGCA+GGG + chr3_2:62476986-62477005 None:intergenic 40.0%
TACCTCTGCAAAATTGCTGA+TGG - chr3_2:62477264-62477283 Msa0415930:CDS 40.0%
ACCTCTGCAAAATTGCTGAT+GGG - chr3_2:62477265-62477284 Msa0415930:CDS 40.0%
! ATCGCTAACGAAGTTGTTTC+TGG - chr3_2:62477346-62477365 Msa0415930:intron 40.0%
ATTGCACAGCAATGTATCAC+GGG + chr3_2:62477404-62477423 None:intergenic 40.0%
! GACCTTAAGAGATGGTGATG+AGG + chr3_2:62472673-62472692 None:intergenic 45.0%
CGAACCAGAAACAGAGAGAT+AGG + chr3_2:62472727-62472746 None:intergenic 45.0%
TCACTCTACCACTCTTCACA+GGG - chr3_2:62472806-62472825 Msa0415930:intron 45.0%
! GATGCTTGGTGAGTTTGCTT+TGG + chr3_2:62472839-62472858 None:intergenic 45.0%
TGATCCTGCACTTGCATTCA+AGG - chr3_2:62472940-62472959 Msa0415930:intron 45.0%
GTATATGTGCTAGTGCTTCG+TGG - chr3_2:62473049-62473068 Msa0415930:intron 45.0%
ACTAGGGGACAAGATCTTTC+TGG - chr3_2:62473262-62473281 Msa0415930:intron 45.0%
CTAGGGGACAAGATCTTTCT+GGG - chr3_2:62473263-62473282 Msa0415930:intron 45.0%
ATCAGCACCTGACATGACAA+CGG + chr3_2:62473624-62473643 None:intergenic 45.0%
!! CATGTCAGGTGCTGATCTTT+CGG - chr3_2:62473628-62473647 Msa0415930:intron 45.0%
!! TAGAAGTGCAGACTTTTCCC+TGG - chr3_2:62473661-62473680 Msa0415930:intron 45.0%
TTCCCTGGCAAATGTGACAA+AGG - chr3_2:62473676-62473695 Msa0415930:intron 45.0%
TTGGCATTACTGCTTTCTGC+AGG - chr3_2:62474252-62474271 Msa0415930:intron 45.0%
! TTGGAAGGTGCACTTGTAAC+GGG - chr3_2:62474295-62474314 Msa0415930:intron 45.0%
CCAAAAATAGCGAGCCAAAC+GGG + chr3_2:62474607-62474626 None:intergenic 45.0%
GCCAAAAATAGCGAGCCAAA+CGG + chr3_2:62474608-62474627 None:intergenic 45.0%
!!! GTTTGGCTCGCTATTTTTGG+CGG - chr3_2:62474607-62474626 Msa0415930:intron 45.0%
!!! TTTGGCTCGCTATTTTTGGC+GGG - chr3_2:62474608-62474627 Msa0415930:intron 45.0%
!!! CTCGCTTTTTATCGTTGGCT+CGG - chr3_2:62474649-62474668 Msa0415930:intron 45.0%
!!! TTTTTATCGTTGGCTCGGCT+CGG - chr3_2:62474654-62474673 Msa0415930:intron 45.0%
!!! AAGTTTTTTGTTTGGCGGGC+CGG - chr3_2:62475244-62475263 Msa0415930:intron 45.0%
!! CGTCTCGTCTCGTTTTTAAC+GGG - chr3_2:62475342-62475361 Msa0415930:intron 45.0%
!!! CGTTTTTAACGGGCTTAGAC+GGG - chr3_2:62475352-62475371 Msa0415930:intron 45.0%
!!! GTTTTTAACGGGCTTAGACG+GGG - chr3_2:62475353-62475372 Msa0415930:intron 45.0%
GACATGGAAAGCGAGTTCTT+TGG - chr3_2:62475488-62475507 Msa0415930:intron 45.0%
CATGGAAAGCGAGTTCTTTG+GGG - chr3_2:62475490-62475509 Msa0415930:intron 45.0%
ATGGAAAGCGAGTTCTTTGG+GGG - chr3_2:62475491-62475510 Msa0415930:intron 45.0%
AATCCAGTTCCCCTTAAGCA+AGG - chr3_2:62475882-62475901 Msa0415930:intron 45.0%
AAACCTTGCTTAAGGGGAAC+TGG + chr3_2:62475888-62475907 None:intergenic 45.0%
GGGTCAGTAGACCTATTTGA+GGG + chr3_2:62475962-62475981 None:intergenic 45.0%
TGGGTCAGTAGACCTATTTG+AGG + chr3_2:62475963-62475982 None:intergenic 45.0%
CGGTACATCTAAAAGCCATG+TGG + chr3_2:62476039-62476058 None:intergenic 45.0%
ACGACTCTTAAGGACGAGTT+TGG + chr3_2:62476128-62476147 None:intergenic 45.0%
CCTTAAGAGTCGTCATGTCT+CGG - chr3_2:62476135-62476154 Msa0415930:intron 45.0%
GAACAAACCTGAAGCTTTGC+TGG + chr3_2:62476171-62476190 None:intergenic 45.0%
! GCAAAGCTTCAGGTTTGTTC+GGG - chr3_2:62476171-62476190 Msa0415930:intron 45.0%
! TTCAGGTTTGTTCGGGTCTT+GGG - chr3_2:62476178-62476197 Msa0415930:intron 45.0%
ACTGAGAGGCGAGTAAGTAA+CGG + chr3_2:62476278-62476297 None:intergenic 45.0%
GAACAAACTCAATGCTCTGC+GGG + chr3_2:62476581-62476600 None:intergenic 45.0%
!! GCAGAGCATTGAGTTTGTTC+AGG - chr3_2:62476581-62476600 Msa0415930:intron 45.0%
GTATGATATCCTTGGACGCA+GGG - chr3_2:62476733-62476752 Msa0415930:intron 45.0%
AGGGCAGAAGGTAGTCATTT+AGG - chr3_2:62476752-62476771 Msa0415930:intron 45.0%
!!! CTTATGGCTAGCTTTTCTGG+CGG - chr3_2:62476933-62476952 Msa0415930:intron 45.0%
TATATCAACCTAGGCAGCCT+TGG + chr3_2:62476959-62476978 None:intergenic 45.0%
CAGGGGTTGTATATCAACCT+AGG + chr3_2:62476968-62476987 None:intergenic 45.0%
TGATATACAACCCCTGCTTG+AGG - chr3_2:62476972-62476991 Msa0415930:intron 45.0%
TGTATCTTCTCCTCAAGCAG+GGG + chr3_2:62476985-62477004 None:intergenic 45.0%
GTTGTATCTTCTCCTCAAGC+AGG + chr3_2:62476987-62477006 None:intergenic 45.0%
GATATTAGCACTGTGAGGGA+AGG - chr3_2:62477115-62477134 Msa0415930:intron 45.0%
TCACGTTGATCTTCTCTGAG+CGG + chr3_2:62477243-62477262 None:intergenic 45.0%
! ACCCATCAGCAATTTTGCAG+AGG + chr3_2:62477269-62477288 None:intergenic 45.0%
GACAGAGTGAACTCATCAAC+TGG - chr3_2:62477370-62477389 Msa0415930:intron 45.0%
!! TAAAAAATATATAAAAGAAT+AGG + chr3_2:62475166-62475185 None:intergenic 5.0%
!!! GATATATATTTTATTTTTTA+TGG - chr3_2:62476011-62476030 Msa0415930:intron 5.0%
!! AGTTGGTGAGCAGGTTGAAG+AGG + chr3_2:62472704-62472723 None:intergenic 50.0%
!! AGAGATAGGAGTTGGTGAGC+AGG + chr3_2:62472713-62472732 None:intergenic 50.0%
CTCACTCTACCACTCTTCAC+AGG - chr3_2:62472805-62472824 Msa0415930:intron 50.0%
GATTGCTTCCCTGTGAAGAG+TGG + chr3_2:62472817-62472836 None:intergenic 50.0%
!! GTTTGGTGATGAATGCAGGG+TGG - chr3_2:62473217-62473236 Msa0415930:intron 50.0%
TCAGCACCTGACATGACAAC+GGG + chr3_2:62473623-62473642 None:intergenic 50.0%
GGATCCAATATTACAGGCGC+CGG - chr3_2:62474334-62474353 Msa0415930:intron 50.0%
CATACCGGCGCCTGTAATAT+TGG + chr3_2:62474341-62474360 None:intergenic 50.0%
!! CCCGTTTGGCTCGCTATTTT+TGG - chr3_2:62474604-62474623 Msa0415930:intron 50.0%
GTTACGACGACAATAGGAGG+AGG - chr3_2:62474745-62474764 Msa0415930:intron 50.0%
TGGAAAGCGAGTTCTTTGGG+GGG - chr3_2:62475492-62475511 Msa0415930:intron 50.0%
AGCATGACGTTTAGGTGAGC+TGG - chr3_2:62476101-62476120 Msa0415930:intron 50.0%
CCGAGACATGACGACTCTTA+AGG + chr3_2:62476138-62476157 None:intergenic 50.0%
! CTTCAGGTTTGTTCGGGTCT+TGG - chr3_2:62476177-62476196 Msa0415930:intron 50.0%
TCGGGTCTTGGGACAAGTTA+TGG - chr3_2:62476189-62476208 Msa0415930:intron 50.0%
CTGAGAGGCGAGTAAGTAAC+GGG + chr3_2:62476277-62476296 None:intergenic 50.0%
CGTATGATATCCTTGGACGC+AGG - chr3_2:62476732-62476751 Msa0415930:intron 50.0%
AGCGGCACATCAGTGAAATC+TGG + chr3_2:62477225-62477244 None:intergenic 50.0%
! GGTGAGCAGGTTGAAGAGGA+AGG + chr3_2:62472700-62472719 None:intergenic 55.0%
! TGGTGATGAATGCAGGGTGG+AGG - chr3_2:62473220-62473239 Msa0415930:intron 55.0%
GGTGATGAATGCAGGGTGGA+GGG - chr3_2:62473221-62473240 Msa0415930:intron 55.0%
ACCTGACATGACAACGGGTG+GGG + chr3_2:62473618-62473637 None:intergenic 55.0%
CACCTGACATGACAACGGGT+GGG + chr3_2:62473619-62473638 None:intergenic 55.0%
AAATAGCGAGCCAAACGGGC+CGG + chr3_2:62474603-62474622 None:intergenic 55.0%
ACGACGACAATAGGAGGAGG+AGG - chr3_2:62474748-62474767 Msa0415930:intron 55.0%
ACGACAATAGGAGGAGGAGG+AGG - chr3_2:62474751-62474770 Msa0415930:intron 55.0%
ACAATAGGAGGAGGAGGAGG+AGG - chr3_2:62474754-62474773 Msa0415930:intron 55.0%
!! TTAGTGGCGGACTTGCGAGT+TGG + chr3_2:62475274-62475293 None:intergenic 55.0%
CTCGCAAGTCCGCCACTAAA+CGG - chr3_2:62475275-62475294 Msa0415930:intron 55.0%
TCGCAAGTCCGCCACTAAAC+GGG - chr3_2:62475276-62475295 Msa0415930:intron 55.0%
! GCGGGGTGAGATTTTGGACT+CGG - chr3_2:62475299-62475318 Msa0415930:intron 55.0%
!! TTTAACGGGCTTAGACGGGG+CGG - chr3_2:62475356-62475375 Msa0415930:intron 55.0%
TTAGGGATGGCAAAGTGGGC+CGG + chr3_2:62475398-62475417 None:intergenic 55.0%
GCACAGCAATGTATCACGGG+TGG + chr3_2:62477401-62477420 None:intergenic 55.0%
ATGCAGGGTGGAGGGCCATA+TGG - chr3_2:62473229-62473248 Msa0415930:intron 60.0%
GGTGGAGGGCCATATGGTCA+AGG - chr3_2:62473235-62473254 Msa0415930:intron 60.0%
TCCCCACCCGTTGTCATGTC+AGG - chr3_2:62473614-62473633 Msa0415930:intron 60.0%
GCACCTGACATGACAACGGG+TGG + chr3_2:62473620-62473639 None:intergenic 60.0%
! GCAAAATGGGCTTGACCCGC+CGG - chr3_2:62474576-62474595 Msa0415930:intron 60.0%
AATAGCGAGCCAAACGGGCC+GGG + chr3_2:62474602-62474621 None:intergenic 60.0%
! CGGCTCGGCTCGTTGAAAAG+CGG - chr3_2:62474669-62474688 Msa0415930:intron 60.0%
! GGCTCGGCTCGTTGAAAAGC+GGG - chr3_2:62474670-62474689 Msa0415930:intron 60.0%
! GCTCGGCTCGTTGAAAAGCG+GGG - chr3_2:62474671-62474690 Msa0415930:intron 60.0%
CGCAAGTCCGCCACTAAACG+GGG - chr3_2:62475277-62475296 Msa0415930:intron 60.0%
AAGTCCGCCACTAAACGGGG+CGG - chr3_2:62475280-62475299 Msa0415930:intron 60.0%
! AACGGGGCGGGGTGAGATTT+TGG - chr3_2:62475293-62475312 Msa0415930:intron 60.0%
!! TTAACGGGCTTAGACGGGGC+GGG - chr3_2:62475357-62475376 Msa0415930:intron 60.0%
TTAGACGGGGCGGGGCTAAA+CGG - chr3_2:62475366-62475385 Msa0415930:intron 60.0%
ATCCTTGGACGCAGGGCAGA+AGG - chr3_2:62476740-62476759 Msa0415930:intron 60.0%
TACCTTCTGCCCTGCGTCCA+AGG + chr3_2:62476745-62476764 None:intergenic 60.0%
!!! GCTAGCTTTTCTGGCGGCCA+AGG - chr3_2:62476939-62476958 Msa0415930:intron 60.0%
CGGCTCGTTGAAAAGCGGGG+CGG - chr3_2:62474674-62474693 Msa0415930:intron 65.0%
GGCTCGTTGAAAAGCGGGGC+GGG - chr3_2:62474675-62474694 Msa0415930:intron 65.0%
GTTGAAAAGCGGGGCGGGCA+CGG - chr3_2:62474680-62474699 Msa0415930:intron 65.0%
TTGAAAAGCGGGGCGGGCAC+GGG - chr3_2:62474681-62474700 Msa0415930:intron 65.0%
AGGCGGCCCGCTTAACTCGT+TGG - chr3_2:62474712-62474731 Msa0415930:intron 65.0%
!! TGGCGGACTTGCGAGTTGGC+GGG + chr3_2:62475270-62475289 None:intergenic 65.0%
!! GTGGCGGACTTGCGAGTTGG+CGG + chr3_2:62475271-62475290 None:intergenic 65.0%
AGTCCGCCACTAAACGGGGC+GGG - chr3_2:62475281-62475300 Msa0415930:intron 65.0%
TCTCACCCCGCCCCGTTTAG+TGG + chr3_2:62475290-62475309 None:intergenic 65.0%
!! TAACGGGCTTAGACGGGGCG+GGG - chr3_2:62475358-62475377 Msa0415930:intron 65.0%
TAGACGGGGCGGGGCTAAAC+GGG - chr3_2:62475367-62475386 Msa0415930:intron 65.0%
TGAAAAGCGGGGCGGGCACG+GGG - chr3_2:62474682-62474701 Msa0415930:intron 70.0%
! GGACTTGCGAGTTGGCGGGC+CGG + chr3_2:62475266-62475285 None:intergenic 70.0%
GTCCGCCACTAAACGGGGCG+GGG - chr3_2:62475282-62475301 Msa0415930:intron 70.0%
CACCCCGCCCCGTTTAGTGG+CGG + chr3_2:62475287-62475306 None:intergenic 70.0%
AGACGGGGCGGGGCTAAACG+GGG - chr3_2:62475368-62475387 Msa0415930:intron 70.0%
TCTGGCGGCCAAGGCTGCCT+AGG - chr3_2:62476948-62476967 Msa0415930:intron 70.0%
ATGGGCTTGACCCGCCGGCC+CGG - chr3_2:62474581-62474600 Msa0415930:intron 75.0%
! AGCCAAACGGGCCGGGCCGG+CGG + chr3_2:62474595-62474614 None:intergenic 80.0%
! GCGAGCCAAACGGGCCGGGC+CGG + chr3_2:62474598-62474617 None:intergenic 80.0%
! AAAGCGGGGCGGGCACGGGG+TGG - chr3_2:62474685-62474704 Msa0415930:intron 80.0%
! AAGCGGGGCGGGCACGGGGT+GGG - chr3_2:62474686-62474705 Msa0415930:intron 80.0%
! CGGGGCGGGGCTAAACGGGG+CGG - chr3_2:62475371-62475390 Msa0415930:intron 80.0%
! GGGGCGGGGCTAAACGGGGC+GGG - chr3_2:62475372-62475391 Msa0415930:intron 80.0%
! CGGGGCTAAACGGGGCGGGC+CGG - chr3_2:62475376-62475395 Msa0415930:intron 80.0%
! ACCCGCCGGCCCGGCCCGTT+TGG - chr3_2:62474590-62474609 Msa0415930:intron 85.0%
! GCCAAACGGGCCGGGCCGGC+GGG + chr3_2:62474594-62474613 None:intergenic 85.0%
! AGCGGGGCGGGCACGGGGTG+GGG - chr3_2:62474687-62474706 Msa0415930:intron 85.0%
! GGGCACGGGGTGGGGCGAGG+CGG - chr3_2:62474695-62474714 Msa0415930:intron 85.0%
! GGCGGGCACGGGGTGGGGCG+AGG - chr3_2:62474692-62474711 Msa0415930:intron 90.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 62472537 62477603 62472537 ID=Msa0415930;Name=Msa0415930
chr3_2 mRNA 62472537 62477603 62472537 ID=Msa0415930-mRNA-1;Parent=Msa0415930;Name=Msa0415930-mRNA-1;_AED=0.03;_eAED=0.03;_QI=91|1|1|1|0.85|0.87|8|177|224
chr3_2 exon 62472537 62472765 62472537 ID=Msa0415930-mRNA-1:exon:13425;Parent=Msa0415930-mRNA-1
chr3_2 exon 62472854 62472914 62472854 ID=Msa0415930-mRNA-1:exon:13424;Parent=Msa0415930-mRNA-1
chr3_2 exon 62475785 62475866 62475785 ID=Msa0415930-mRNA-1:exon:13423;Parent=Msa0415930-mRNA-1
chr3_2 exon 62476443 62476504 62476443 ID=Msa0415930-mRNA-1:exon:13422;Parent=Msa0415930-mRNA-1
chr3_2 exon 62476606 62476678 62476606 ID=Msa0415930-mRNA-1:exon:13421;Parent=Msa0415930-mRNA-1
chr3_2 exon 62476810 62476905 62476810 ID=Msa0415930-mRNA-1:exon:13420;Parent=Msa0415930-mRNA-1
chr3_2 exon 62477179 62477313 62477179 ID=Msa0415930-mRNA-1:exon:13419;Parent=Msa0415930-mRNA-1
chr3_2 exon 62477399 62477603 62477399 ID=Msa0415930-mRNA-1:exon:13418;Parent=Msa0415930-mRNA-1
chr3_2 five_prime_UTR 62477513 62477603 62477513 ID=Msa0415930-mRNA-1:five_prime_utr;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62477399 62477512 62477399 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62477179 62477313 62477179 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62476810 62476905 62476810 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62476606 62476678 62476606 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62476443 62476504 62476443 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62475785 62475866 62475785 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62472854 62472914 62472854 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 CDS 62472714 62472765 62472714 ID=Msa0415930-mRNA-1:cds;Parent=Msa0415930-mRNA-1
chr3_2 three_prime_UTR 62472537 62472713 62472537 ID=Msa0415930-mRNA-1:three_prime_utr;Parent=Msa0415930-mRNA-1
Gene Sequence

>Msa0415930

ATGGCTCTTTTTCTGAACGCCTCTTTGCCTTCAACTTCCAAACCTCATCACCATCTCTTAAGGTCAACACCTTCCTCTTCAACCTGCTCACCAACTCCTATCTCTCTGTTTCTGGGAAGCAATCCAAAGCAAACTCACCAAGCATCTCAGAAACTCACATTATCATTCGGTGAATCAGTGTCTAGTGCAGCTCTAGTTGCTCTTCTATCTGCTTCTCTCTTCTTCGTTGATCCTGCACTTGCATTCAAGGGTGGAGGGCCATATGGTCAAGGAGTTACTAGGGGACAAGATCTTTCTGGGAAAGATTTCAGTGGCAAGACACTCATCAAGCAAGACTTCAAAACGTCCATACTGCGTCAAGCCAATTTTAAAGGTGCAAAATTATTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATACTGATCTTAGAAGTGCAGACTTTTCCCTGGCAAATGTGACAAAGGTAAATTTGAGCAATGCTAATTTGGAAGGTGCACTTGTAACGGGAAATACATCTTTTAAGGGATCCAATATTACAGGCGCCGATTTCACTGATGTGCCGCTCAGAGAAGATCAACGTGAATACCTCTGCAAAATTGCTGATGGAGTGAACTCATCAACTGGAAATGCCACCCGTGATACATTGCTGTGCAATTAA

Protein sequence

>Msa0415930

MALFLNASLPSTSKPHHHLLRSTPSSSTCSPTPISLFLGSNPKQTHQASQKLTLSFGESVSSAALVALLSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDTDLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQREYLCKIADGVNSSTGNATRDTLLCN*