AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241940 MtrunA17_Chr2g0293571 76.610 295 14 5 1 241 1 294 2.01e-146 410
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0241940 AT5G44520.1 48.375 277 82 3 1 225 1 268 7.97e-81 244
Msa0241940 AT5G44520.2 48.375 277 82 3 1 225 31 298 8.45e-81 245

Find 69 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTCACCAACTTCTTTAT+TGG 0.125915 2_2:-17930314 Msa0241940:CDS
GGGACATTTGTTGCTATAAT+TGG 0.176637 2_2:-17928653 Msa0241940:CDS
TCCAAATGGTTTGAATGTTT+TGG 0.189196 2_2:-17925532 Msa0241940:CDS
GGGCATCATTCTAACAAAAT+TGG 0.210497 2_2:+17930258 None:intergenic
TTAAATGTTAGTAAAATTTC+CGG 0.249514 2_2:-17925284 Msa0241940:three_prime_UTR
GAGATTGACGATATGTTTCT+TGG 0.281572 2_2:-17928289 Msa0241940:CDS
TTGGGGTCTGGTCATGCTTC+TGG 0.291464 2_2:-17929371 Msa0241940:CDS
CATCCGCAAAGCAGAGTTAT+AGG 0.304797 2_2:+17925463 None:intergenic
TCCAAAACATTCAAACCATT+TGG 0.308435 2_2:+17925531 None:intergenic
CTTACAGACTGAATTAAAAC+TGG 0.355408 2_2:+17928409 None:intergenic
GGTATGGCCATTCAGCATTT+AGG 0.364770 2_2:-17929350 Msa0241940:CDS
AACTTACCAAGGCTTGGTAT+TGG 0.380544 2_2:+17927275 None:intergenic
AAATCTCCTTGCAGCTCAAC+TGG 0.387307 2_2:-17928327 Msa0241940:intron
AAAATCCTTGATAAAATTGA+TGG 0.403326 2_2:-17927175 Msa0241940:CDS
CTTCTTTCCAATAAAGAAGT+TGG 0.407706 2_2:+17930307 None:intergenic
GTGAAAAGTGGCATGGTTGT+AGG 0.420807 2_2:-17929395 Msa0241940:CDS
GTGGTAATTGCTTCTCCAAA+TGG 0.424304 2_2:-17925546 Msa0241940:CDS
AATACTACGTGTACTCTCTT+TGG 0.426940 2_2:-17925252 Msa0241940:three_prime_UTR
AGTGGCATGGTTGTAGGATT+GGG 0.431364 2_2:-17929389 Msa0241940:CDS
GGCATCATTCTAACAAAATT+GGG 0.432006 2_2:+17930259 None:intergenic
GACTGCAGATGTATTGAGTT+AGG 0.436585 2_2:-17925502 Msa0241940:exon
AAGTGGCATGGTTGTAGGAT+TGG 0.446137 2_2:-17929390 Msa0241940:CDS
TCAAATTACCATGACGAAGC+TGG 0.449566 2_2:+17929324 None:intergenic
GCTTCCATAGCTTCTTCTAC+AGG 0.450670 2_2:-17930346 Msa0241940:CDS
AGTGGATAAGGGAGGGAGGT+AGG 0.452688 2_2:+17930417 None:intergenic
CTTCCAGACCACCTTTGTAC+TGG 0.454820 2_2:+17928440 None:intergenic
CTTCCTATAACTCTGCTTTG+CGG 0.456065 2_2:-17925466 Msa0241940:three_prime_UTR
TGTGGAGAAGACCAGCTATT+GGG 0.457431 2_2:-17927376 Msa0241940:CDS
ACGTAGTATTGTCACATAAC+CGG 0.458401 2_2:+17925265 None:intergenic
GTCTGGTCATGCTTCTGGTA+TGG 0.462156 2_2:-17929366 Msa0241940:CDS
ATGGTTGTAGGATTGGGGTC+TGG 0.471721 2_2:-17929383 Msa0241940:CDS
AAGCCCTGTAGAAGAAGCTA+TGG 0.477415 2_2:+17930342 None:intergenic
GGACCTGCTTGCCCAATAGC+TGG 0.480422 2_2:+17927365 None:intergenic
CTTCCATAGCTTCTTCTACA+GGG 0.481289 2_2:-17930345 Msa0241940:CDS
AAACCAGTACAAAGGTGGTC+TGG 0.488741 2_2:-17928443 Msa0241940:CDS
GTGTGGAGAAGACCAGCTAT+TGG 0.489328 2_2:-17927377 Msa0241940:CDS
CAGTGTATTGAGCTGCTTGG+AGG 0.509994 2_2:+17930203 None:intergenic
GTGTGAGAATTGAACATCAA+TGG 0.520558 2_2:-17930368 Msa0241940:exon
AGACCAGCTATTGGGCAAGC+AGG 0.523384 2_2:-17927368 Msa0241940:CDS
GATGCCGACGGTGTAGAAGA+AGG 0.526194 2_2:-17928674 Msa0241940:CDS
AGGCAGAACTTACCAAGGCT+TGG 0.536554 2_2:+17927269 None:intergenic
TGTCCTTCTCCTGTGACTAG+TGG 0.537726 2_2:+17927326 None:intergenic
CTCCTTGCAGCTCAACTGGT+TGG 0.542222 2_2:-17928323 Msa0241940:intron
ATGATCGTTATCAACAATAA+CGG 0.550169 2_2:-17925400 Msa0241940:three_prime_UTR
ACATCTCCAATACCAAGCCT+TGG 0.560116 2_2:-17927281 Msa0241940:intron
CTGGCGACCTAAATGCTGAA+TGG 0.561942 2_2:+17929343 None:intergenic
ATTGGGCAAGCAGGTCCACT+AGG 0.571854 2_2:-17927359 Msa0241940:CDS
CAGTACAAAGGTGGTCTGGA+AGG 0.578306 2_2:-17928439 Msa0241940:CDS
TATGTTTCTTGGCGATGCTG+AGG 0.580030 2_2:-17928278 Msa0241940:intron
ATGCCGACGGTGTAGAAGAA+GGG 0.581558 2_2:-17928673 Msa0241940:CDS
TGTCCCTTCTTCTACACCGT+CGG 0.593219 2_2:+17928670 None:intergenic
TTTCCACTAGTCACAGGAGA+AGG 0.598318 2_2:-17927329 Msa0241940:CDS
GTGGACACATACGTGAAAAG+TGG 0.598925 2_2:-17929407 Msa0241940:CDS
ATACAGTGTATTGAGCTGCT+TGG 0.600416 2_2:+17930200 None:intergenic
TTAGGTCGCCAGCTTCGTCA+TGG 0.602568 2_2:-17929332 Msa0241940:CDS
GGTGACTTTCCACTAGTCAC+AGG 0.620541 2_2:-17927335 Msa0241940:CDS
ATAGAAAATCGAAGCTGCAA+AGG 0.627200 2_2:+17925343 None:intergenic
GTGGCATGGTTGTAGGATTG+GGG 0.627903 2_2:-17929388 Msa0241940:CDS
GTCATCGAGACAAGAACGAG+TGG 0.632702 2_2:+17930237 None:intergenic
ATTGAAGAAAACCAGTACAA+AGG 0.633072 2_2:-17928451 Msa0241940:intron
AGTGGAAAGTCACCTCCTAG+TGG 0.638138 2_2:+17927344 None:intergenic
GGGCAAGCAGGTCCACTAGG+AGG 0.661196 2_2:-17927356 Msa0241940:CDS
GAAGAAAACCAGTACAAAGG+TGG 0.661605 2_2:-17928448 Msa0241940:intron
TTGTTGCTATAATTGGACGT+CGG 0.672724 2_2:-17928646 Msa0241940:CDS
TCATCGAGACAAGAACGAGT+GGG 0.674847 2_2:+17930238 None:intergenic
ATTGCATTTGATGATGCCGA+CGG 0.678766 2_2:-17928686 Msa0241940:CDS
ATTGATGGTGTTGCAGACCA+TGG 0.679648 2_2:-17927160 Msa0241940:CDS
CACATACGTGAAAAGTGGCA+TGG 0.683635 2_2:-17929402 Msa0241940:CDS
TGTGTAACGCAGATGTACAG+TGG 0.696434 2_2:-17925565 Msa0241940:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAGTAAATTTAAGTT+TGG - chr2_2:17926820-17926839 Msa0241940:intron 10.0%
!!! TAATTTTATTCTCATTAAAT+AGG - chr2_2:17928531-17928550 Msa0241940:intron 10.0%
!!! TATATTTTATAAATGTTTTC+TGG - chr2_2:17929052-17929071 Msa0241940:intron 10.0%
!!! ATATTTTATAAATGTTTTCT+GGG - chr2_2:17929053-17929072 Msa0241940:intron 10.0%
!!! TTTTTTTCAATTAAGATTGT+AGG - chr2_2:17925796-17925815 Msa0241940:intron 15.0%
!!! TTTTTTCAATTAAGATTGTA+GGG - chr2_2:17925797-17925816 Msa0241940:intron 15.0%
!!! TTATTTTCATGAATTTATAG+TGG + chr2_2:17925894-17925913 None:intergenic 15.0%
!! GGTTAATTACATTTAAATTA+TGG - chr2_2:17925935-17925954 Msa0241940:intron 15.0%
!! TTTCTTTATATATATTTGCA+GGG + chr2_2:17927601-17927620 None:intergenic 15.0%
!!! TTTTCTTTATATATATTTGC+AGG + chr2_2:17927602-17927621 None:intergenic 15.0%
!! TGCAAATATATATAAAGAAA+AGG - chr2_2:17927601-17927620 Msa0241940:intron 15.0%
!! TAAATATAATTGTAATGAAC+AGG + chr2_2:17928210-17928229 None:intergenic 15.0%
!!! TGTAAATGACATTTTAAATT+AGG - chr2_2:17930191-17930210 Msa0241940:intron 15.0%
!!! GTAAATGACATTTTAAATTA+GGG - chr2_2:17930192-17930211 Msa0241940:intron 15.0%
!! TTAAATGTTAGTAAAATTTC+CGG - chr2_2:17930345-17930364 Msa0241940:CDS 15.0%
!! TGTATTCATATAAGCTATTA+TGG + chr2_2:17925544-17925563 None:intergenic 20.0%
!! TTAATTCTTAGTTGTGTTAT+TGG - chr2_2:17925574-17925593 Msa0241940:intron 20.0%
!! AAATATGTTACTGTTCAAAT+AGG - chr2_2:17925621-17925640 Msa0241940:intron 20.0%
!! TATTCATCTTCCAATTAAAT+GGG + chr2_2:17926171-17926190 None:intergenic 20.0%
!! TTATTCATCTTCCAATTAAA+TGG + chr2_2:17926172-17926191 None:intergenic 20.0%
!!! TTTAGATATGTGTTGTTATT+TGG - chr2_2:17926196-17926215 Msa0241940:intron 20.0%
!! TATATCAATTAAACTCAGAA+AGG + chr2_2:17926366-17926385 None:intergenic 20.0%
!! TGAGTTTAATTGATATACAT+CGG - chr2_2:17926369-17926388 Msa0241940:intron 20.0%
!!! TGATATTTTTTTTTCCATAC+AGG - chr2_2:17926397-17926416 Msa0241940:intron 20.0%
!! ATATCTTGATATGTAAAGTT+AGG - chr2_2:17926843-17926862 Msa0241940:intron 20.0%
!!! AATAATGAACACTAGTTTAT+TGG + chr2_2:17927161-17927180 None:intergenic 20.0%
!! AAGAAATTGTTAGATCTAAT+TGG - chr2_2:17927422-17927441 Msa0241940:intron 20.0%
!! TTTATCAACAAAATGTTTCT+TGG - chr2_2:17927449-17927468 Msa0241940:intron 20.0%
!! TTCTTTATATATATTTGCAG+GGG + chr2_2:17927600-17927619 None:intergenic 20.0%
!! AATGTTTACAAAAAGATAGA+GGG - chr2_2:17927624-17927643 Msa0241940:intron 20.0%
!! TTGATTCTCTTTGTATAATA+AGG - chr2_2:17928230-17928249 Msa0241940:intron 20.0%
!! AAAATCCTTGATAAAATTGA+TGG - chr2_2:17928454-17928473 Msa0241940:intron 20.0%
!!! TTTTATTCTCATTAAATAGG+TGG - chr2_2:17928534-17928553 Msa0241940:intron 20.0%
!! TTTAATATTTGTGTCCTAAA+GGG + chr2_2:17929476-17929495 None:intergenic 20.0%
!! ATTTCAACTTGTATAAAAAC+AGG + chr2_2:17929529-17929548 None:intergenic 20.0%
!! TTATTCATAGAAAACTTATG+AGG - chr2_2:17929589-17929608 Msa0241940:intron 20.0%
!! TAATAGGAATATATACAAAG+AGG - chr2_2:17929740-17929759 Msa0241940:intron 20.0%
!! AAAAACTAAATTAGATGAGT+TGG + chr2_2:17930039-17930058 None:intergenic 20.0%
!!! AACTTCTTTTTAGTGGATAA+GGG + chr2_2:17925226-17925245 None:intergenic 25.0%
!!! TAACTTCTTTTTAGTGGATA+AGG + chr2_2:17925227-17925246 None:intergenic 25.0%
!! TTCATCTAACTTCTTTTTAG+TGG + chr2_2:17925233-17925252 None:intergenic 25.0%
! CAAATAGGCTAAAAAAATAG+TGG - chr2_2:17925636-17925655 Msa0241940:intron 25.0%
! ATTAACCACAAATTTGAACA+TGG + chr2_2:17925965-17925984 None:intergenic 25.0%
! ATGTTCAAATTTGTGGTTAA+TGG - chr2_2:17925964-17925983 Msa0241940:intron 25.0%
! AAACCATTAATGAACATATC+AGG + chr2_2:17926020-17926039 None:intergenic 25.0%
! TCATGTTTACTTATTATGCT+TGG - chr2_2:17926139-17926158 Msa0241940:intron 25.0%
! GTAATTTGAAAGACATAGTA+GGG - chr2_2:17926319-17926338 Msa0241940:intron 25.0%
! CAAGAAATACTCAACATTAA+AGG + chr2_2:17926670-17926689 None:intergenic 25.0%
!!! TTGAGTATTTCTTGTTTTAG+AGG - chr2_2:17926676-17926695 Msa0241940:intron 25.0%
!!! TGAGTATTTCTTGTTTTAGA+GGG - chr2_2:17926677-17926696 Msa0241940:intron 25.0%
! AAGAAAAACTCAGAAAAAGA+GGG + chr2_2:17927390-17927409 None:intergenic 25.0%
! GAATGTTTACAAAAAGATAG+AGG - chr2_2:17927623-17927642 Msa0241940:intron 25.0%
! ATGTTTACAAAAAGATAGAG+GGG - chr2_2:17927625-17927644 Msa0241940:intron 25.0%
! AGTTAATGAAGCCTAAAATT+AGG - chr2_2:17927673-17927692 Msa0241940:intron 25.0%
!!! AAATTAGTGCTCATTTTGAT+AGG + chr2_2:17927714-17927733 None:intergenic 25.0%
! TGTCTATACAATCTTATAGT+TGG + chr2_2:17927756-17927775 None:intergenic 25.0%
! CATAAACACATTTATAGAGA+AGG + chr2_2:17927814-17927833 None:intergenic 25.0%
! ATCAAAGTTCTTTGTATTGA+TGG + chr2_2:17927931-17927950 None:intergenic 25.0%
!!! AATGATTTCAAGTTATCATC+TGG - chr2_2:17928009-17928028 Msa0241940:intron 25.0%
! GCTCAGTTTAAAAGAAATAA+AGG - chr2_2:17929350-17929369 Msa0241940:CDS 25.0%
! CTTTAATATTTGTGTCCTAA+AGG + chr2_2:17929477-17929496 None:intergenic 25.0%
! TAGAGCTTCTTAACAAATTT+CGG + chr2_2:17929722-17929741 None:intergenic 25.0%
!! ATTTGTTAAGAAGCTCTAAT+AGG - chr2_2:17929724-17929743 Msa0241940:intron 25.0%
!!! TTATCCTTTATTTCTGCATT+TGG - chr2_2:17929789-17929808 Msa0241940:intron 25.0%
! CGTTGAACTAAATAGTAAAT+AGG + chr2_2:17929883-17929902 None:intergenic 25.0%
! ATGATCGTTATCAACAATAA+CGG - chr2_2:17930229-17930248 Msa0241940:CDS 25.0%
GAATTCACCAACTTCTTTAT+TGG - chr2_2:17925315-17925334 Msa0241940:three_prime_UTR 30.0%
CTTCTTTCCAATAAAGAAGT+TGG + chr2_2:17925325-17925344 None:intergenic 30.0%
GGCATCATTCTAACAAAATT+GGG + chr2_2:17925373-17925392 None:intergenic 30.0%
TTATGGAGAGCTTATGAATA+TGG + chr2_2:17925527-17925546 None:intergenic 30.0%
TTATCTACCATAAGTTCATC+TGG + chr2_2:17925677-17925696 None:intergenic 30.0%
CTGATTGAATTTGTAGTGTT+TGG - chr2_2:17925720-17925739 Msa0241940:intron 30.0%
GTAGTGTTTGGTAAAATTAG+CGG - chr2_2:17925732-17925751 Msa0241940:intron 30.0%
ACCACATAAATTTGAGCTTA+TGG + chr2_2:17925918-17925937 None:intergenic 30.0%
GTTAACCATGTTCAAATTTG+TGG - chr2_2:17925957-17925976 Msa0241940:intron 30.0%
TTGAAATTCATTAACCACCA+AGG + chr2_2:17925995-17926014 None:intergenic 30.0%
ACACCTGATATGTTCATTAA+TGG - chr2_2:17926014-17926033 Msa0241940:intron 30.0%
GCTCAAATAAGTGGTTAATT+AGG + chr2_2:17926054-17926073 None:intergenic 30.0%
! AAATGTTTTGCGAAAAGATG+TGG + chr2_2:17926085-17926104 None:intergenic 30.0%
! TTGGTGATTACCCATTTAAT+TGG - chr2_2:17926158-17926177 Msa0241940:intron 30.0%
!! GATATGTGTTGTTATTTGGT+AGG - chr2_2:17926200-17926219 Msa0241940:intron 30.0%
GGTAATTTGAAAGACATAGT+AGG - chr2_2:17926318-17926337 Msa0241940:intron 30.0%
ATCAATTAAACTCAGAAAGG+AGG + chr2_2:17926363-17926382 None:intergenic 30.0%
! AAAATCGTCGGCATATTTTA+GGG - chr2_2:17926489-17926508 Msa0241940:intron 30.0%
ACAAATGCATCAATGTCAAA+TGG + chr2_2:17926537-17926556 None:intergenic 30.0%
ATTGATGCATTTGTTTATGC+AGG - chr2_2:17926543-17926562 Msa0241940:intron 30.0%
GTAAGAGATTTCTTCTCTTT+AGG + chr2_2:17926754-17926773 None:intergenic 30.0%
CTCTATCAAAACATTTATCG+TGG + chr2_2:17926789-17926808 None:intergenic 30.0%
TTTATTGGCGTTATTCAGTA+TGG + chr2_2:17927146-17927165 None:intergenic 30.0%
ATTGAAGAAAACCAGTACAA+AGG - chr2_2:17927178-17927197 Msa0241940:CDS 30.0%
CTTACAGACTGAATTAAAAC+TGG + chr2_2:17927223-17927242 None:intergenic 30.0%
GAAGAAAAACTCAGAAAAAG+AGG + chr2_2:17927391-17927410 None:intergenic 30.0%
TTAAACAAAGGAAGTTGCAA+AGG - chr2_2:17927571-17927590 Msa0241940:intron 30.0%
TGTTTACAAAAAGATAGAGG+GGG - chr2_2:17927626-17927645 Msa0241940:intron 30.0%
! GTCTTGGTATTCCTAATTTT+AGG + chr2_2:17927687-17927706 None:intergenic 30.0%
!! CATTTTGATAGGAATAGTCT+TGG + chr2_2:17927703-17927722 None:intergenic 30.0%
AAATGAGCACTAATTTGATG+TGG - chr2_2:17927718-17927737 Msa0241940:intron 30.0%
! ATAACTTGTGTTAGGAAACA+TGG + chr2_2:17927981-17928000 None:intergenic 30.0%
! TTACACTGATAACTTGTGTT+AGG + chr2_2:17927989-17928008 None:intergenic 30.0%
AAGAGAATGCAGAAAAACAT+GGG + chr2_2:17928169-17928188 None:intergenic 30.0%
TAAGAGAATGCAGAAAAACA+TGG + chr2_2:17928170-17928189 None:intergenic 30.0%
TCTCTTTGTATAATAAGGTG+TGG - chr2_2:17928235-17928254 Msa0241940:intron 30.0%
! CAACACCATCAATTTTATCA+AGG + chr2_2:17928462-17928481 None:intergenic 30.0%
AAGTTGAGAGAGAAAACTAA+CGG + chr2_2:17928511-17928530 None:intergenic 30.0%
AAACTTCTCATAATGCCTTT+AGG - chr2_2:17928678-17928697 Msa0241940:CDS 30.0%
AAAAAGAAATCAACCATCGA+CGG + chr2_2:17928954-17928973 None:intergenic 30.0%
GAACAAGTAATCGATCAAAA+AGG + chr2_2:17928977-17928996 None:intergenic 30.0%
AATGCGTATGTTTAAGTGAT+TGG - chr2_2:17929019-17929038 Msa0241940:intron 30.0%
ATGCGTATGTTTAAGTGATT+GGG - chr2_2:17929020-17929039 Msa0241940:intron 30.0%
TATGTTTAAGTGATTGGGTA+TGG - chr2_2:17929025-17929044 Msa0241940:intron 30.0%
AAAGTTTGTGAGATAGCTAT+CGG - chr2_2:17929296-17929315 Msa0241940:intron 30.0%
AGAGCTTCTTAACAAATTTC+GGG + chr2_2:17929721-17929740 None:intergenic 30.0%
! ATATACAAAGAGGTGCAAAA+AGG - chr2_2:17929750-17929769 Msa0241940:intron 30.0%
! TATACAAAGAGGTGCAAAAA+GGG - chr2_2:17929751-17929770 Msa0241940:intron 30.0%
TTTGCCAAATGCAGAAATAA+AGG + chr2_2:17929796-17929815 None:intergenic 30.0%
TTTGGCAAAGAGAAATACAA+AGG - chr2_2:17929807-17929826 Msa0241940:intron 30.0%
!!! AAGATGTTTTAAGAGTGACT+AGG + chr2_2:17929931-17929950 None:intergenic 30.0%
ATAGAACCAATTCAATCGTT+TGG + chr2_2:17929960-17929979 None:intergenic 30.0%
!!! CTTTAGTTAGTTTTGCTTCT+GGG + chr2_2:17929993-17930012 None:intergenic 30.0%
CAGAAGCAAAACTAACTAAA+GGG - chr2_2:17929992-17930011 Msa0241940:intron 30.0%
! TCCAAATGGTTTGAATGTTT+TGG - chr2_2:17930097-17930116 Msa0241940:intron 30.0%
TCCAAAACATTCAAACCATT+TGG + chr2_2:17930101-17930120 None:intergenic 30.0%
!!! ATCAACAATAACGGATTTTG+CGG - chr2_2:17930238-17930257 Msa0241940:CDS 30.0%
!! AGCTTCGATTTTCTATTTCT+AGG - chr2_2:17930293-17930312 Msa0241940:CDS 30.0%
!! TCTTTTTAGTGGATAAGGGA+GGG + chr2_2:17925222-17925241 None:intergenic 35.0%
!! TTCTTTTTAGTGGATAAGGG+AGG + chr2_2:17925223-17925242 None:intergenic 35.0%
GTGTGAGAATTGAACATCAA+TGG - chr2_2:17925261-17925280 Msa0241940:three_prime_UTR 35.0%
TGGAAAGAAGAAGAAGAAGA+AGG - chr2_2:17925335-17925354 Msa0241940:three_prime_UTR 35.0%
GGGCATCATTCTAACAAAAT+TGG + chr2_2:17925374-17925393 None:intergenic 35.0%
TAAGCTACCAGATGAACTTA+TGG - chr2_2:17925667-17925686 Msa0241940:intron 35.0%
ACACTACAAATTCAATCAGC+TGG + chr2_2:17925719-17925738 None:intergenic 35.0%
GCCATAAGCTCAAATTTATG+TGG - chr2_2:17925914-17925933 Msa0241940:intron 35.0%
GTTAATGCAGCTCAAATAAG+TGG + chr2_2:17926063-17926082 None:intergenic 35.0%
!! ATGTGTTGTTATTTGGTAGG+TGG - chr2_2:17926203-17926222 Msa0241940:intron 35.0%
TAGAAAATTGACTGCCTGTA+TGG + chr2_2:17926414-17926433 None:intergenic 35.0%
TTCACCATGTAGAAAATCGT+CGG - chr2_2:17926477-17926496 Msa0241940:intron 35.0%
! GAAAATCGTCGGCATATTTT+AGG - chr2_2:17926488-17926507 Msa0241940:intron 35.0%
!! ATCAATGTCAAATGGATTGG+TGG + chr2_2:17926529-17926548 None:intergenic 35.0%
TGCATCAATGTCAAATGGAT+TGG + chr2_2:17926532-17926551 None:intergenic 35.0%
!!! TTCTTGTTTTAGAGGGTACT+TGG - chr2_2:17926684-17926703 Msa0241940:intron 35.0%
GAATAGTATACAAGGCTTTC+TGG + chr2_2:17926717-17926736 None:intergenic 35.0%
! AAAGCCTTGTATACTATTCC+TGG - chr2_2:17926718-17926737 Msa0241940:intron 35.0%
TTCACCAGGAATAGTATACA+AGG + chr2_2:17926725-17926744 None:intergenic 35.0%
!! TCTTTAGGAAACTTTTCACC+AGG + chr2_2:17926739-17926758 None:intergenic 35.0%
! GGGACATTTGTTGCTATAAT+TGG - chr2_2:17926976-17926995 Msa0241940:intron 35.0%
TTGTTGCTATAATTGGACGT+CGG - chr2_2:17926983-17927002 Msa0241940:intron 35.0%
GAGATTGACGATATGTTTCT+TGG - chr2_2:17927340-17927359 Msa0241940:CDS 35.0%
! ATCGTACTAAGTTGAATGAG+TGG + chr2_2:17927532-17927551 None:intergenic 35.0%
GTTTACAAAAAGATAGAGGG+GGG - chr2_2:17927627-17927646 Msa0241940:intron 35.0%
ACTTGTAATAACCCCATTAG+TGG - chr2_2:17927875-17927894 Msa0241940:intron 35.0%
CTTGTAATAACCCCATTAGT+GGG - chr2_2:17927876-17927895 Msa0241940:intron 35.0%
AGAAAGTTATCCCACTAATG+GGG + chr2_2:17927889-17927908 None:intergenic 35.0%
GAGAAAGTTATCCCACTAAT+GGG + chr2_2:17927890-17927909 None:intergenic 35.0%
TGAGAAAGTTATCCCACTAA+TGG + chr2_2:17927891-17927910 None:intergenic 35.0%
TATTTCTCTCATTCCTTCCA+TGG - chr2_2:17927952-17927971 Msa0241940:intron 35.0%
AGAGAATGCAGAAAAACATG+GGG + chr2_2:17928168-17928187 None:intergenic 35.0%
AGTTGAGAGAGAAAACTAAC+GGG + chr2_2:17928510-17928529 None:intergenic 35.0%
! TTCTCATAATGCCTTTAGGA+CGG - chr2_2:17928682-17928701 Msa0241940:CDS 35.0%
TTTGGGGAAATAATGACTGT+AGG - chr2_2:17928746-17928765 Msa0241940:intron 35.0%
GGTGAAATGGATCAAGAAAT+GGG + chr2_2:17928864-17928883 None:intergenic 35.0%
AGGTGAAATGGATCAAGAAA+TGG + chr2_2:17928865-17928884 None:intergenic 35.0%
CTTAAACATACGCATTGCTA+AGG + chr2_2:17929015-17929034 None:intergenic 35.0%
AAGTTTGTGAGATAGCTATC+GGG - chr2_2:17929297-17929316 Msa0241940:intron 35.0%
! TTTGTCAAGATCTGAAGCAT+AGG - chr2_2:17929381-17929400 Msa0241940:CDS 35.0%
! CTTTGGGAAATAATGACTGT+TGG + chr2_2:17929413-17929432 None:intergenic 35.0%
! ATCCAGATTGAGTGACTTTT+GGG + chr2_2:17929453-17929472 None:intergenic 35.0%
ATTACCCGAATTGTGAAATC+AGG + chr2_2:17929694-17929713 None:intergenic 35.0%
TCAACGAGTATAACATAAGC+TGG - chr2_2:17929897-17929916 Msa0241940:intron 35.0%
GTTCTACCAAACGATTGAAT+TGG - chr2_2:17929951-17929970 Msa0241940:intron 35.0%
!!! CCTTTAGTTAGTTTTGCTTC+TGG + chr2_2:17929994-17930013 None:intergenic 35.0%
CCAGAAGCAAAACTAACTAA+AGG - chr2_2:17929991-17930010 Msa0241940:intron 35.0%
CAAAACTAACTAAAGGGAAG+TGG - chr2_2:17929998-17930017 Msa0241940:intron 35.0%
ATAGAAAATCGAAGCTGCAA+AGG + chr2_2:17930289-17930308 None:intergenic 35.0%
ACGTAGTATTGTCACATAAC+CGG + chr2_2:17930367-17930386 None:intergenic 35.0%
AATACTACGTGTACTCTCTT+TGG - chr2_2:17930377-17930396 Msa0241940:five_prime_UTR 35.0%
CTTCCATAGCTTCTTCTACA+GGG - chr2_2:17925284-17925303 Msa0241940:three_prime_UTR 40.0%
ATACAGTGTATTGAGCTGCT+TGG + chr2_2:17925432-17925451 None:intergenic 40.0%
ATGGCATAAGCTGTTTGAAC+TGG + chr2_2:17925508-17925527 None:intergenic 40.0%
TGTGGTTAATGGAGTTACCT+TGG - chr2_2:17925975-17925994 Msa0241940:intron 40.0%
TCAAATTACCATGACGAAGC+TGG + chr2_2:17926308-17926327 None:intergenic 40.0%
! CAGGCAGTCAATTTTCTACA+TGG - chr2_2:17926416-17926435 Msa0241940:intron 40.0%
! TATGCCGACGATTTTCTACA+TGG + chr2_2:17926484-17926503 None:intergenic 40.0%
!! ATTGCATTTGATGATGCCGA+CGG - chr2_2:17926943-17926962 Msa0241940:intron 40.0%
GGAATCCATAATCCAAGAGA+AGG - chr2_2:17927020-17927039 Msa0241940:intron 40.0%
!! ACTAGCCTTCTCTTGGATTA+TGG + chr2_2:17927028-17927047 None:intergenic 40.0%
!! TATAGCAACTAGCCTTCTCT+TGG + chr2_2:17927035-17927054 None:intergenic 40.0%
AAACAACAGGAGAAAAAGCG+GGG + chr2_2:17927118-17927137 None:intergenic 40.0%
CAAACAACAGGAGAAAAAGC+GGG + chr2_2:17927119-17927138 None:intergenic 40.0%
GCAAACAACAGGAGAAAAAG+CGG + chr2_2:17927120-17927139 None:intergenic 40.0%
GAAGAAAACCAGTACAAAGG+TGG - chr2_2:17927181-17927200 Msa0241940:CDS 40.0%
ACACACACTTATGATCACAG+TGG - chr2_2:17928059-17928078 Msa0241940:intron 40.0%
GGGGACATTAGAAAACTTCT+TGG + chr2_2:17928148-17928167 None:intergenic 40.0%
GAGAATGCAGAAAAACATGG+GGG + chr2_2:17928167-17928186 None:intergenic 40.0%
! AACTTACCAAGGCTTGGTAT+TGG + chr2_2:17928357-17928376 None:intergenic 40.0%
GTTGAGAGAGAAAACTAACG+GGG + chr2_2:17928509-17928528 None:intergenic 40.0%
! ATCCGGATTGAGTGACTTTT+GGG - chr2_2:17928705-17928724 Msa0241940:intron 40.0%
TGGGAAAAGTCACATGACTT+TGG - chr2_2:17928728-17928747 Msa0241940:intron 40.0%
GGGAAAAGTCACATGACTTT+GGG - chr2_2:17928729-17928748 Msa0241940:intron 40.0%
GGAAAAGTCACATGACTTTG+GGG - chr2_2:17928730-17928749 Msa0241940:intron 40.0%
! CTTGTCTAGATCTGAAGCAT+AGG + chr2_2:17928778-17928797 None:intergenic 40.0%
! CAAGAAATGGGTTTGAAGTG+TGG + chr2_2:17928852-17928871 None:intergenic 40.0%
TTTAAGTGATTGGGTATGGC+TGG - chr2_2:17929029-17929048 Msa0241940:intron 40.0%
! TCTTCTCTTGTGGTGTTGAA+AGG + chr2_2:17929091-17929110 None:intergenic 40.0%
GCATCATGATTCTTCTCTTG+TGG + chr2_2:17929101-17929120 None:intergenic 40.0%
ATCTGAACACCAACGATGAA+AGG - chr2_2:17929220-17929239 Msa0241940:intron 40.0%
GGGAAAAGTCACATGACTTT+GGG + chr2_2:17928729-17928748 None:intergenic 40.0%
TGGGAAAAGTCACATGACTT+TGG + chr2_2:17928728-17928747 None:intergenic 40.0%
!! AGATTGAGTGACTTTTGGGT+GGG + chr2_2:17929449-17929468 None:intergenic 40.0%
! GATCCAGATTGAGTGACTTT+TGG + chr2_2:17929454-17929473 None:intergenic 40.0%
TCGAAGAAATTGAGATGCAG+AGG + chr2_2:17929555-17929574 None:intergenic 40.0%
TTGAGAAGCTTATCCAAACC+AGG - chr2_2:17929650-17929669 Msa0241940:intron 40.0%
CTTCGCCTGATTTCACAATT+CGG - chr2_2:17929686-17929705 Msa0241940:intron 40.0%
TTCGCCTGATTTCACAATTC+GGG - chr2_2:17929687-17929706 Msa0241940:intron 40.0%
TTGCACTTATCACAGACTTC+AGG + chr2_2:17929860-17929879 None:intergenic 40.0%
GTGGTAATTGCTTCTCCAAA+TGG - chr2_2:17930083-17930102 Msa0241940:intron 40.0%
GACTGCAGATGTATTGAGTT+AGG - chr2_2:17930127-17930146 Msa0241940:intron 40.0%
CTTCCTATAACTCTGCTTTG+CGG - chr2_2:17930163-17930182 Msa0241940:intron 40.0%
!! TTTTAGTGGATAAGGGAGGG+AGG + chr2_2:17925219-17925238 None:intergenic 45.0%
GCTTCCATAGCTTCTTCTAC+AGG - chr2_2:17925283-17925302 Msa0241940:three_prime_UTR 45.0%
AAGCCCTGTAGAAGAAGCTA+TGG + chr2_2:17925290-17925309 None:intergenic 45.0%
TCATCGAGACAAGAACGAGT+GGG + chr2_2:17925394-17925413 None:intergenic 45.0%
GGTTAATGGAGTTACCTTGG+TGG - chr2_2:17925978-17925997 Msa0241940:intron 45.0%
GTGGACACATACGTGAAAAG+TGG - chr2_2:17926222-17926241 Msa0241940:intron 45.0%
CACATACGTGAAAAGTGGCA+TGG - chr2_2:17926227-17926246 Msa0241940:intron 45.0%
GTGAAAAGTGGCATGGTTGT+AGG - chr2_2:17926234-17926253 Msa0241940:intron 45.0%
AAGTGGCATGGTTGTAGGAT+TGG - chr2_2:17926239-17926258 Msa0241940:intron 45.0%
AGTGGCATGGTTGTAGGATT+GGG - chr2_2:17926240-17926259 Msa0241940:intron 45.0%
GGTATGGCCATTCAGCATTT+AGG - chr2_2:17926279-17926298 Msa0241940:intron 45.0%
AAGTGCAAGTGAAGCAGCAA+AGG - chr2_2:17926574-17926593 Msa0241940:intron 45.0%
CTGTCTTGGTAGGTATCCAA+AGG + chr2_2:17926608-17926627 None:intergenic 45.0%
CACATGAGAACTGTCTTGGT+AGG + chr2_2:17926618-17926637 None:intergenic 45.0%
TGCACACATGAGAACTGTCT+TGG + chr2_2:17926622-17926641 None:intergenic 45.0%
! AGTATACAAGGCTTTCTGGC+AGG + chr2_2:17926713-17926732 None:intergenic 45.0%
ACGTCGGAAATTGCAAAGTG+AGG - chr2_2:17926999-17927018 Msa0241940:intron 45.0%
! CAGTATGGACTGCAAACAAC+AGG + chr2_2:17927131-17927150 None:intergenic 45.0%
AAACCAGTACAAAGGTGGTC+TGG - chr2_2:17927186-17927205 Msa0241940:CDS 45.0%
AAATCTCCTTGCAGCTCAAC+TGG - chr2_2:17927302-17927321 Msa0241940:CDS 45.0%
TATGTTTCTTGGCGATGCTG+AGG - chr2_2:17927351-17927370 Msa0241940:CDS 45.0%
GGACATAAAACCTAACCCTC+AGG - chr2_2:17927648-17927667 Msa0241940:intron 45.0%
CATTAACTCTCCTGAGGGTT+AGG + chr2_2:17927661-17927680 None:intergenic 45.0%
GGCTTCATTAACTCTCCTGA+GGG + chr2_2:17927666-17927685 None:intergenic 45.0%
AGGCTTCATTAACTCTCCTG+AGG + chr2_2:17927667-17927686 None:intergenic 45.0%
! AAATCACTGTGCTGATCAGC+TGG + chr2_2:17927791-17927810 None:intergenic 45.0%
GTTAGGAAACATGGCATCCA+TGG + chr2_2:17927972-17927991 None:intergenic 45.0%
TGTGGAGAAGACCAGCTATT+GGG - chr2_2:17928253-17928272 Msa0241940:intron 45.0%
TTTCCACTAGTCACAGGAGA+AGG - chr2_2:17928300-17928319 Msa0241940:CDS 45.0%
ACATCTCCAATACCAAGCCT+TGG - chr2_2:17928348-17928367 Msa0241940:intron 45.0%
ATTGCAGGCAGAACTTACCA+AGG + chr2_2:17928368-17928387 None:intergenic 45.0%
ACGCAACATCTCTCAATTGC+AGG + chr2_2:17928383-17928402 None:intergenic 45.0%
!! ATTGATGGTGTTGCAGACCA+TGG - chr2_2:17928469-17928488 Msa0241940:intron 45.0%
! GGGTTTTCGATATGACACCA+TGG + chr2_2:17928489-17928508 None:intergenic 45.0%
!! TAATGCCTTTAGGACGGATC+CGG - chr2_2:17928688-17928707 Msa0241940:CDS 45.0%
! GATCCGGATTGAGTGACTTT+TGG - chr2_2:17928704-17928723 Msa0241940:intron 45.0%
CACCCAAAAGTCACTCAATC+CGG + chr2_2:17929448-17929467 None:intergenic 45.0%
!! GGATTGAGTGACTTTTGGGT+GGG - chr2_2:17928709-17928728 Msa0241940:intron 45.0%
AAGAAATCAACCATCGACGG+TGG + chr2_2:17928951-17928970 None:intergenic 45.0%
AACACCAACGATGAAAGGTG+CGG - chr2_2:17929225-17929244 Msa0241940:intron 45.0%
! CAGATTGAGTGACTTTTGGG+TGG + chr2_2:17929450-17929469 None:intergenic 45.0%
CACCCAAAAGTCACTCAATC+TGG - chr2_2:17929448-17929467 Msa0241940:intron 45.0%
CACTCAATCTGGATCCCTTT+AGG - chr2_2:17929459-17929478 Msa0241940:intron 45.0%
TTCATCAGTAAGGCCTGGTT+TGG + chr2_2:17929666-17929685 None:intergenic 45.0%
TCAGGCGAAGTTCATCAGTA+AGG + chr2_2:17929676-17929695 None:intergenic 45.0%
TGTGTAACGCAGATGTACAG+TGG - chr2_2:17930064-17930083 Msa0241940:intron 45.0%
CATCCGCAAAGCAGAGTTAT+AGG + chr2_2:17930169-17930188 None:intergenic 45.0%
!! TTAAAAAAAAAAAAAAATAG+TGG + chr2_2:17927555-17927574 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTAAACAA+AGG - chr2_2:17927559-17927578 Msa0241940:intron 5.0%
!! ATTTCATTTATTTAATTAAA+AGG + chr2_2:17928813-17928832 None:intergenic 5.0%
GTCATCGAGACAAGAACGAG+TGG + chr2_2:17925395-17925414 None:intergenic 50.0%
CAGTGTATTGAGCTGCTTGG+AGG + chr2_2:17925429-17925448 None:intergenic 50.0%
GTGGCATGGTTGTAGGATTG+GGG - chr2_2:17926241-17926260 Msa0241940:intron 50.0%
ATGGTTGTAGGATTGGGGTC+TGG - chr2_2:17926246-17926265 Msa0241940:intron 50.0%
GTCTGGTCATGCTTCTGGTA+TGG - chr2_2:17926263-17926282 Msa0241940:intron 50.0%
CTGGCGACCTAAATGCTGAA+TGG + chr2_2:17926289-17926308 None:intergenic 50.0%
AAAGGAGGAAGAGCTCACGT+GGG + chr2_2:17926348-17926367 None:intergenic 50.0%
CAAGTGAAGCAGCAAAGGCT+GGG - chr2_2:17926579-17926598 Msa0241940:intron 50.0%
AGCAAAGGCTGGGATTCCTT+TGG - chr2_2:17926589-17926608 Msa0241940:intron 50.0%
ATGCCGACGGTGTAGAAGAA+GGG - chr2_2:17926956-17926975 Msa0241940:intron 50.0%
TGTCCCTTCTTCTACACCGT+CGG + chr2_2:17926962-17926981 None:intergenic 50.0%
CTTCCAGACCACCTTTGTAC+TGG + chr2_2:17927192-17927211 None:intergenic 50.0%
CAGTACAAAGGTGGTCTGGA+AGG - chr2_2:17927190-17927209 Msa0241940:intron 50.0%
GCTGATCAGCTGGCTAACAT+TGG + chr2_2:17927781-17927800 None:intergenic 50.0%
GGAAACATGGCATCCATGGA+AGG + chr2_2:17927968-17927987 None:intergenic 50.0%
GTGTGGAGAAGACCAGCTAT+TGG - chr2_2:17928252-17928271 Msa0241940:intron 50.0%
AGTGGAAAGTCACCTCCTAG+TGG + chr2_2:17928288-17928307 None:intergenic 50.0%
GGTGACTTTCCACTAGTCAC+AGG - chr2_2:17928294-17928313 Msa0241940:CDS 50.0%
TGTCCTTCTCCTGTGACTAG+TGG + chr2_2:17928306-17928325 None:intergenic 50.0%
AGGCAGAACTTACCAAGGCT+TGG + chr2_2:17928363-17928382 None:intergenic 50.0%
TCAATCCGGATCCGTCCTAA+AGG + chr2_2:17928696-17928715 None:intergenic 50.0%
! CGGATTGAGTGACTTTTGGG+TGG - chr2_2:17928708-17928727 Msa0241940:intron 50.0%
CGAAGTTCATCAGTAAGGCC+TGG + chr2_2:17929671-17929690 None:intergenic 50.0%
AGTGGATAAGGGAGGGAGGT+AGG + chr2_2:17925215-17925234 None:intergenic 55.0%
TTGGGGTCTGGTCATGCTTC+TGG - chr2_2:17926258-17926277 Msa0241940:intron 55.0%
TTAGGTCGCCAGCTTCGTCA+TGG - chr2_2:17926297-17926316 Msa0241940:intron 55.0%
GAAAGGAGGAAGAGCTCACG+TGG + chr2_2:17926349-17926368 None:intergenic 55.0%
GCAAGTGAAGCAGCAAAGGC+TGG - chr2_2:17926578-17926597 Msa0241940:intron 55.0%
GATGCCGACGGTGTAGAAGA+AGG - chr2_2:17926955-17926974 Msa0241940:intron 55.0%
CTCCTTGCAGCTCAACTGGT+TGG - chr2_2:17927306-17927325 Msa0241940:CDS 55.0%
TGCCAACCAGTTGAGCTGCA+AGG + chr2_2:17927311-17927330 None:intergenic 55.0%
AGACCAGCTATTGGGCAAGC+AGG - chr2_2:17928261-17928280 Msa0241940:intron 55.0%
ATTGGGCAAGCAGGTCCACT+AGG - chr2_2:17928270-17928289 Msa0241940:intron 55.0%
GCAGGTCGAGGAAGGTGAAA+TGG + chr2_2:17928877-17928896 None:intergenic 55.0%
TGAAGGTAGCAGGTCGAGGA+AGG + chr2_2:17928885-17928904 None:intergenic 55.0%
GGATTGAAGGTAGCAGGTCG+AGG + chr2_2:17928889-17928908 None:intergenic 55.0%
AGAGGCGGAAACGAGTGCAA+CGG + chr2_2:17928924-17928943 None:intergenic 55.0%
! ACCAACGATGAAAGGTGCGG+CGG - chr2_2:17929228-17929247 Msa0241940:intron 55.0%
GGCGGCGACAGTTTGGAAAA+CGG - chr2_2:17929267-17929286 Msa0241940:intron 55.0%
GGCGACAGTTTGGAAAACGG+CGG - chr2_2:17929270-17929289 Msa0241940:intron 55.0%
GCGACAGTTTGGAAAACGGC+GGG - chr2_2:17929271-17929290 Msa0241940:intron 55.0%
GGACCTGCTTGCCCAATAGC+TGG + chr2_2:17928267-17928286 None:intergenic 60.0%
!! AGCGGCGGATTGAAGGTAGC+AGG + chr2_2:17928895-17928914 None:intergenic 60.0%
!! GCTGTGAAGCGGCGGATTGA+AGG + chr2_2:17928902-17928921 None:intergenic 60.0%
CGAGTGCAACGGCTGTGAAG+CGG + chr2_2:17928913-17928932 None:intergenic 60.0%
GGGCAAGCAGGTCCACTAGG+AGG - chr2_2:17928273-17928292 Msa0241940:intron 65.0%
GTGCAACGGCTGTGAAGCGG+CGG + chr2_2:17928910-17928929 None:intergenic 65.0%
ATCGACGGTGGCGAGAGAGG+CGG + chr2_2:17928939-17928958 None:intergenic 65.0%
ACCATCGACGGTGGCGAGAG+AGG + chr2_2:17928942-17928961 None:intergenic 65.0%
GCCGCCGCACCTTTCATCGT+TGG + chr2_2:17929232-17929251 None:intergenic 65.0%
GGCGGCGACAATGAGAGGTG+CGG - chr2_2:17929246-17929265 Msa0241940:intron 65.0%
! GGCGACAATGAGAGGTGCGG+CGG - chr2_2:17929249-17929268 Msa0241940:intron 65.0%
GCCTCTCTCGCCACCGTCGA+TGG - chr2_2:17928938-17928957 Msa0241940:intron 70.0%
GGTGCGGCGGCGACAATGAG+AGG - chr2_2:17929241-17929260 Msa0241940:intron 70.0%
GAGGTGCGGCGGCGACAGTT+TGG - chr2_2:17929260-17929279 Msa0241940:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 17925201 17930450 17925201 ID=Msa0241940;Name=Msa0241940
chr2_2 mRNA 17925201 17930450 17925201 ID=Msa0241940-mRNA-1;Parent=Msa0241940;Name=Msa0241940-mRNA-1;_AED=0.19;_eAED=0.19;_QI=79|0.71|0.62|1|0.71|0.62|8|302|242
chr2_2 exon 17925201 17925575 17925201 ID=Msa0241940-mRNA-1:exon:7356;Parent=Msa0241940-mRNA-1
chr2_2 exon 17927142 17927208 17927142 ID=Msa0241940-mRNA-1:exon:7355;Parent=Msa0241940-mRNA-1
chr2_2 exon 17927282 17927399 17927282 ID=Msa0241940-mRNA-1:exon:7354;Parent=Msa0241940-mRNA-1
chr2_2 exon 17928279 17928335 17928279 ID=Msa0241940-mRNA-1:exon:7353;Parent=Msa0241940-mRNA-1
chr2_2 exon 17928414 17928466 17928414 ID=Msa0241940-mRNA-1:exon:7352;Parent=Msa0241940-mRNA-1
chr2_2 exon 17928636 17928714 17928636 ID=Msa0241940-mRNA-1:exon:7351;Parent=Msa0241940-mRNA-1
chr2_2 exon 17929316 17929429 17929316 ID=Msa0241940-mRNA-1:exon:7350;Parent=Msa0241940-mRNA-1
chr2_2 exon 17930204 17930450 17930204 ID=Msa0241940-mRNA-1:exon:7349;Parent=Msa0241940-mRNA-1
chr2_2 five_prime_UTR 17930372 17930450 17930372 ID=Msa0241940-mRNA-1:five_prime_utr;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17930204 17930371 17930204 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17929316 17929429 17929316 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17928636 17928714 17928636 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17928414 17928466 17928414 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17928279 17928335 17928279 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17927282 17927399 17927282 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17927142 17927208 17927142 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 CDS 17925503 17925575 17925503 ID=Msa0241940-mRNA-1:cds;Parent=Msa0241940-mRNA-1
chr2_2 three_prime_UTR 17925201 17925502 17925201 ID=Msa0241940-mRNA-1:three_prime_utr;Parent=Msa0241940-mRNA-1
Gene Sequence

>Msa0241940

ATGGCTTCCATAGCTTCTTCTACAGGGCTTCTTCTGAATTCACCAACTTCTTTATTGGAAAGAAGAAGAAGAAGAAGGAAAAGAATCAGTCCCAATTTTGTTAGAATGATGCCCACTCGTTCTTGTCTCGATGACACTTCTTCTCTCCTCCAAGCAGCTCAATACACTGTGGACACATACGTGAAAAGTGGCATGGTTGTAGGATTGGGGTCTGGTCATGCTTCTGGTATGGCCATTCAGCATTTAGGTCGCCAGCTTCGTCATGGTAATTTGAAAGACATAATTGATATTGCATTTGATGATGCCGACGGTGTAGAAGAAGGGACATTTGTTGCTATAATTGGACGTCGGAAATTGCAAAAAAACCAGTACAAAGGTGGTCTGGAAGGTTCTATTCCAGTTTTAATTCAGTCTCTCAACTGGTTGGCAACTGCTGAAGAGATTGACGATATGTTTCTTGGCGATGCTGAGGTGTGGAGAAGACCAGCTATTGGGCAAGCAGGTCCACTAGGAGGTGACTTTCCACTAGTCACAGGAGAAGGACATAATGTTCTTGATGTTATCTTCACATCTCCAATACCAAGCCTTGCTGAAGTAGCAAAAATCCTTGATAAAATTGATGGTGTTGCAGACCATGGTGTCATATCGAAAACCCCATGTACAGTGGTAATTGCTTCTCCAAATGGTTTGAATGTTTTGGACAAATTGACTGCAGATGTATTGAGTTAG

Protein sequence

>Msa0241940

MASIASSTGLLLNSPTSLLERRRRRRKRISPNFVRMMPTRSCLDDTSSLLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRHGNLKDIIDIAFDDADGVEEGTFVAIIGRRKLQKNQYKGGLEGSIPVLIQSLNWLATAEEIDDMFLGDAEVWRRPAIGQAGPLGGDFPLVTGEGHNVLDVIFTSPIPSLAEVAKILDKIDGVADHGVISKTPCTVVIASPNGLNVLDKLTADVLS*