Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21927.t1 | XP_024639082.1 | 94.7 | 580 | 31 | 0 | 1 | 580 | 145 | 724 | 0.00E+00 | 1141.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21927.t1 | Q9C9I6 | 58.0 | 583 | 241 | 4 | 1 | 581 | 96 | 676 | 4.9e-197 | 689.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21927.t1 | G7K7Y9 | 94.7 | 580 | 31 | 0 | 1 | 580 | 145 | 724 | 0.0e+00 | 1141.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene21927 | 0.832608 | 8.58E-56 | -1.69E-46 |
| MS.gene049159 | MS.gene21927 | 0.833241 | 5.97E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene21927 | 0.841498 | 4.58E-58 | -1.69E-46 |
| MS.gene049272 | MS.gene21927 | 0.804202 | 2.42E-49 | -1.69E-46 |
| MS.gene049343 | MS.gene21927 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene21927 | 0.825874 | 3.69E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene21927 | 0.841508 | 4.55E-58 | -1.69E-46 |
| MS.gene049669 | MS.gene21927 | 0.802183 | 6.33E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene21927 | 0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene21927 | 0.852587 | 4.19E-61 | -1.69E-46 |
| MS.gene049983 | MS.gene21927 | 0.800492 | 1.40E-48 | -1.69E-46 |
| MS.gene050026 | MS.gene21927 | 0.817615 | 3.01E-52 | -1.69E-46 |
| MS.gene050073 | MS.gene21927 | 0.804427 | 2.17E-49 | -1.69E-46 |
| MS.gene050137 | MS.gene21927 | 0.809192 | 2.14E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene21927 | 0.809314 | 2.01E-50 | -1.69E-46 |
| MS.gene05016 | MS.gene21927 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene21927 | 0.834911 | 2.28E-56 | -1.69E-46 |
| MS.gene050559 | MS.gene21927 | 0.80375 | 3.00E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene21927 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene21927 | 0.817694 | 2.89E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene21927 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene21927 | 0.809699 | 1.66E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene21927 | 0.803213 | 3.88E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene21927 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene051210 | MS.gene21927 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene21927 | 0.818295 | 2.11E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene21927 | 0.831818 | 1.35E-55 | -1.69E-46 |
| MS.gene051332 | MS.gene21927 | 0.821122 | 4.78E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene21927 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene051365 | MS.gene21927 | 0.805257 | 1.46E-49 | -1.69E-46 |
| MS.gene051574 | MS.gene21927 | 0.804996 | 1.65E-49 | -1.69E-46 |
| MS.gene051628 | MS.gene21927 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene21927 | 0.804503 | 2.09E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene21927 | 0.831195 | 1.92E-55 | -1.69E-46 |
| MS.gene051720 | MS.gene21927 | 0.824975 | 6.03E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene21927 | 0.840522 | 8.27E-58 | -1.69E-46 |
| MS.gene051800 | MS.gene21927 | 0.833967 | 3.93E-56 | -1.69E-46 |
| MS.gene051957 | MS.gene21927 | 0.809804 | 1.58E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene21927 | 0.816258 | 6.07E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene21927 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene052108 | MS.gene21927 | 0.815367 | 9.59E-52 | -1.69E-46 |
| MS.gene052208 | MS.gene21927 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene21927 | 0.833112 | 6.43E-56 | -1.69E-46 |
| MS.gene052333 | MS.gene21927 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene052384 | MS.gene21927 | 0.816355 | 5.77E-52 | -1.69E-46 |
| MS.gene052463 | MS.gene21927 | 0.826808 | 2.21E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene21927 | 0.812384 | 4.36E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene21927 | 0.811204 | 7.87E-51 | -1.69E-46 |
| MS.gene052534 | MS.gene21927 | 0.814334 | 1.62E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene21927 | 0.847317 | 1.25E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene21927 | 0.851227 | 1.02E-60 | -1.69E-46 |
| MS.gene052586 | MS.gene21927 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene052669 | MS.gene21927 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene21927 | 0.82552 | 4.48E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene21927 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene21927 | 0.811795 | 5.86E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene21927 | 0.814999 | 1.16E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene21927 | 0.805919 | 1.06E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene21927 | 0.804431 | 2.17E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene21927 | 0.81696 | 4.22E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene21927 | 0.830519 | 2.81E-55 | -1.69E-46 |
| MS.gene05308 | MS.gene21927 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene21927 | 0.836466 | 9.21E-57 | -1.69E-46 |
| MS.gene053221 | MS.gene21927 | 0.80829 | 3.33E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene21927 | 0.868351 | 6.97E-66 | -1.69E-46 |
| MS.gene053321 | MS.gene21927 | 0.818515 | 1.88E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene21927 | 0.801265 | 9.77E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene21927 | 0.813958 | 1.97E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene21927 | 0.81325 | 2.81E-51 | -1.69E-46 |
| MS.gene054139 | MS.gene21927 | 0.817254 | 3.63E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene21927 | 0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene21927 | 0.840831 | 6.86E-58 | -1.69E-46 |
| MS.gene054236 | MS.gene21927 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene21927 | 0.82097 | 5.18E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene21927 | -0.829571 | 4.78E-55 | -1.69E-46 |
| MS.gene054467 | MS.gene21927 | 0.82614 | 3.19E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene21927 | 0.817514 | 3.17E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene21927 | 0.842445 | 2.57E-58 | -1.69E-46 |
| MS.gene05447 | MS.gene21927 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene054559 | MS.gene21927 | 0.826656 | 2.41E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene21927 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene21927 | 0.820532 | 6.53E-53 | -1.69E-46 |
| MS.gene054651 | MS.gene21927 | 0.85507 | 8.07E-62 | -1.69E-46 |
| MS.gene054657 | MS.gene21927 | 0.830892 | 2.27E-55 | -1.69E-46 |
| MS.gene054658 | MS.gene21927 | 0.806808 | 6.87E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene21927 | 0.830687 | 2.55E-55 | -1.69E-46 |
| MS.gene054991 | MS.gene21927 | 0.812747 | 3.63E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene21927 | 0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene21927 | 0.821284 | 4.38E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene21927 | 0.832584 | 8.70E-56 | -1.69E-46 |
| MS.gene055228 | MS.gene21927 | 0.805317 | 1.42E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene21927 | 0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene21927 | 0.806533 | 7.86E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene21927 | 0.817318 | 3.51E-52 | -1.69E-46 |
| MS.gene055586 | MS.gene21927 | 0.825127 | 5.55E-54 | -1.69E-46 |
| MS.gene055589 | MS.gene21927 | 0.806282 | 8.87E-50 | -1.69E-46 |
| MS.gene055694 | MS.gene21927 | 0.819873 | 9.24E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene21927 | 0.802076 | 6.66E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene21927 | 0.83587 | 1.30E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene21927 | 0.840202 | 1.00E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene21927 | 0.804822 | 1.80E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene21927 | 0.816361 | 5.75E-52 | -1.69E-46 |
| MS.gene056045 | MS.gene21927 | 0.812972 | 3.24E-51 | -1.69E-46 |
| MS.gene05604 | MS.gene21927 | 0.86324 | 2.87E-64 | -1.69E-46 |
| MS.gene056050 | MS.gene21927 | 0.836286 | 1.02E-56 | -1.69E-46 |
| MS.gene056162 | MS.gene21927 | 0.833389 | 5.49E-56 | -1.69E-46 |
| MS.gene056173 | MS.gene21927 | 0.860255 | 2.35E-63 | -1.69E-46 |
| MS.gene056174 | MS.gene21927 | 0.814891 | 1.22E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene21927 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene21927 | 0.824387 | 8.30E-54 | -1.69E-46 |
| MS.gene056498 | MS.gene21927 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene21927 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene21927 | 0.834947 | 2.23E-56 | -1.69E-46 |
| MS.gene056973 | MS.gene21927 | 0.804734 | 1.87E-49 | -1.69E-46 |
| MS.gene057012 | MS.gene21927 | 0.808187 | 3.50E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene21927 | 0.820458 | 6.79E-53 | -1.69E-46 |
| MS.gene057027 | MS.gene21927 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene21927 | 0.800401 | 1.47E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene21927 | 0.821983 | 3.02E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene21927 | 0.849581 | 2.95E-60 | -1.69E-46 |
| MS.gene057444 | MS.gene21927 | 0.81112 | 8.21E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene21927 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene057693 | MS.gene21927 | 0.826948 | 2.05E-54 | -1.69E-46 |
| MS.gene057855 | MS.gene21927 | 0.80646 | 8.14E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene21927 | 0.84475 | 6.23E-59 | -1.69E-46 |
| MS.gene057915 | MS.gene21927 | 0.868892 | 4.66E-66 | -1.69E-46 |
| MS.gene058010 | MS.gene21927 | 0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene21927 | 0.807329 | 5.33E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene21927 | 0.802077 | 6.66E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene21927 | 0.802982 | 4.33E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene21927 | 0.868926 | 4.54E-66 | -1.69E-46 |
| MS.gene058636 | MS.gene21927 | 0.809254 | 2.07E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene21927 | 0.839163 | 1.87E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene21927 | 0.866525 | 2.68E-65 | -1.69E-46 |
| MS.gene059272 | MS.gene21927 | 0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene059331 | MS.gene21927 | 0.836644 | 8.29E-57 | -1.69E-46 |
| MS.gene059335 | MS.gene21927 | 0.823765 | 1.16E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene21927 | 0.822729 | 2.03E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene21927 | 0.807605 | 4.66E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene21927 | 0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene21927 | 0.828463 | 8.87E-55 | -1.69E-46 |
| MS.gene059725 | MS.gene21927 | 0.831171 | 1.94E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene21927 | 0.807944 | 3.95E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene21927 | 0.826336 | 2.87E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene21927 | 0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene21927 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene21927 | 0.826475 | 2.66E-54 | -1.69E-46 |
| MS.gene060373 | MS.gene21927 | 0.822079 | 2.87E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene21927 | 0.827395 | 1.60E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene21927 | 0.840398 | 8.91E-58 | -1.69E-46 |
| MS.gene060572 | MS.gene21927 | 0.80614 | 9.51E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene21927 | 0.818502 | 1.90E-52 | -1.69E-46 |
| MS.gene060634 | MS.gene21927 | -0.808265 | 3.37E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene21927 | 0.806302 | 8.79E-50 | -1.69E-46 |
| MS.gene060685 | MS.gene21927 | 0.804182 | 2.44E-49 | -1.69E-46 |
| MS.gene060781 | MS.gene21927 | 0.807517 | 4.86E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene21927 | 0.82634 | 2.86E-54 | -1.69E-46 |
| MS.gene060933 | MS.gene21927 | 0.813237 | 2.83E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene21927 | 0.817918 | 2.57E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene21927 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene061087 | MS.gene21927 | 0.818743 | 1.67E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 174 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATATACTTCCATGATTA+TGG | 0.164982 | 5.1:-2684218 | MS.gene21927:CDS |
| ACATGGAATGCCATGCTTTC+TGG | 0.185055 | 5.1:-2684526 | MS.gene21927:CDS |
| TGATTAGTTGTTATGCTTCT+AGG | 0.195160 | 5.1:-2684918 | MS.gene21927:CDS |
| AATTTATAAGGCAACTATTA+AGG | 0.200971 | 5.1:+2681015 | None:intergenic |
| GCAAGCCTACTTCGGCAATA+TGG | 0.214598 | 5.1:-2683925 | MS.gene21927:CDS |
| GGAGGTGTCCCCAGCTAAAA+AGG | 0.229848 | 5.1:+2683667 | None:intergenic |
| CTTGCAATGGTCACATAATT+AGG | 0.235703 | 5.1:+2684433 | None:intergenic |
| AGAATGCAATTTCTGTTTAT+AGG | 0.238109 | 5.1:-2685188 | MS.gene21927:CDS |
| ATTATCATTATAAATTTATA+AGG | 0.243197 | 5.1:+2681003 | None:intergenic |
| TAAGGCTTGTGGGGAGTTAT+TGG | 0.247388 | 5.1:-2685112 | MS.gene21927:CDS |
| GCTTTCTGGGTTTGCTCACC+TGG | 0.248671 | 5.1:-2684512 | MS.gene21927:CDS |
| TTGAAAGGAATGTTATTATA+TGG | 0.250326 | 5.1:-2684843 | MS.gene21927:CDS |
| TCATGCATGGTTGATCTCTT+TGG | 0.258445 | 5.1:-2683998 | MS.gene21927:CDS |
| TTTGAGGAGTTGAGTATGAT+AGG | 0.261223 | 5.1:-2683452 | MS.gene21927:CDS |
| TGATCCTTTGCATTGGAATA+TGG | 0.268284 | 5.1:-2685244 | MS.gene21927:CDS |
| GATGAAGCGTTTCGGTTATT+TGG | 0.270136 | 5.1:-2684886 | MS.gene21927:CDS |
| GCACATTGGAGCGGTTAAAT+TGG | 0.283333 | 5.1:-2684695 | MS.gene21927:CDS |
| CATGGAATGCCATGCTTTCT+GGG | 0.286115 | 5.1:-2684525 | MS.gene21927:CDS |
| ATTGAGGAGTTGAGTATGAT+AGG | 0.295662 | 5.1:-2683539 | MS.gene21927:CDS |
| CACGTAGCATTTCTCTAAAA+AGG | 0.313415 | 5.1:+2684467 | None:intergenic |
| GTGTTTATGTATGGTAGGTT+TGG | 0.314117 | 5.1:-2685009 | MS.gene21927:CDS |
| GCAATATGGGCTACTCTAAT+AGG | 0.320135 | 5.1:-2683911 | MS.gene21927:CDS |
| GTGCTTGGGTTGATGTTGGC+AGG | 0.322369 | 5.1:-2683700 | MS.gene21927:CDS |
| TACTTATCCGTCGGTTCTTA+AGG | 0.326923 | 5.1:-2685130 | MS.gene21927:CDS |
| GACTCTGTTGCAATGGTTGT+TGG | 0.336616 | 5.1:-2684733 | MS.gene21927:CDS |
| ACTTCCATGATTATGGGATA+TGG | 0.336908 | 5.1:-2684211 | MS.gene21927:CDS |
| TTCAGGTCATTGTTTGTTGA+TGG | 0.342974 | 5.1:-2683813 | MS.gene21927:CDS |
| GATTAGTTGTTATGCTTCTA+GGG | 0.346072 | 5.1:-2684917 | MS.gene21927:CDS |
| CTAACAGCATGTAGTCATTC+TGG | 0.347395 | 5.1:-2684097 | MS.gene21927:CDS |
| ATTTATAAGGCAACTATTAA+GGG | 0.348011 | 5.1:+2681016 | None:intergenic |
| TGTTGTAGGTGGAGAGCATT+TGG | 0.353875 | 5.1:-2681084 | MS.gene21927:intron |
| AGGACTTATATGAGGGATTC+AGG | 0.363113 | 5.1:-2683743 | MS.gene21927:CDS |
| CACATTGGAGCGGTTAAATT+GGG | 0.371248 | 5.1:-2684694 | MS.gene21927:CDS |
| TAATGAATCAAAGACTTTCC+TGG | 0.373372 | 5.1:+2684258 | None:intergenic |
| ATCCACGAAAATACAGTGAT+TGG | 0.373791 | 5.1:-2683878 | MS.gene21927:CDS |
| TTATGCTTCTAGGGGTTTGT+GGG | 0.394685 | 5.1:-2684908 | MS.gene21927:CDS |
| TTCAGCAGAGTTCTATTAAG+TGG | 0.396725 | 5.1:-2685056 | MS.gene21927:CDS |
| TCCACGAAAATACAGTGATT+GGG | 0.400261 | 5.1:-2683877 | MS.gene21927:CDS |
| AGAAAGATGATAGAAGTCTA+TGG | 0.402197 | 5.1:-2684046 | MS.gene21927:CDS |
| CAAGCCTACTTCGGCAATAT+GGG | 0.406569 | 5.1:-2683924 | MS.gene21927:CDS |
| AAAGGACTCCTGGTTGTGCT+TGG | 0.406887 | 5.1:-2683715 | MS.gene21927:CDS |
| GGATATGGTGTGAGTGGGGA+TGG | 0.407116 | 5.1:-2684196 | MS.gene21927:CDS |
| CCGTCGGTTCTTAAGGCTTG+TGG | 0.408307 | 5.1:-2685123 | MS.gene21927:CDS |
| AAGGACTCCTGGTTGTGCTT+GGG | 0.408464 | 5.1:-2683714 | MS.gene21927:CDS |
| GTTGATCTCTTTGGAAGGGC+TGG | 0.411005 | 5.1:-2683989 | MS.gene21927:CDS |
| GTTATGCTTCTAGGGGTTTG+TGG | 0.411251 | 5.1:-2684909 | MS.gene21927:CDS |
| TGTTTATGTATGGTAGGTTT+GGG | 0.413613 | 5.1:-2685008 | MS.gene21927:CDS |
| TGGTAGGTTTGGGAAGTTAG+AGG | 0.417671 | 5.1:-2684998 | MS.gene21927:CDS |
| GACACCTCCAACCCTCGTTC+AGG | 0.419521 | 5.1:-2683653 | MS.gene21927:CDS |
| CGTCGGTTCTTAAGGCTTGT+GGG | 0.427534 | 5.1:-2685122 | MS.gene21927:CDS |
| TGCTCTGTGGGTTGTGCATG+TGG | 0.428319 | 5.1:+2683325 | None:intergenic |
| GCAACCATTGTCACGTGATC+CGG | 0.428459 | 5.1:+2684124 | None:intergenic |
| TTCAATTATGCTGCTTGACC+TGG | 0.431683 | 5.1:+2683294 | None:intergenic |
| ATTTGCTATTCGAGCGCAAA+GGG | 0.433447 | 5.1:+2684402 | None:intergenic |
| CATTAATTACAATGTATTCC+AGG | 0.434181 | 5.1:-2684609 | MS.gene21927:CDS |
| ATTATATGGAATACCATTGC+TGG | 0.435401 | 5.1:-2684829 | MS.gene21927:CDS |
| ATGGGCTGCAGGAAAGTTGC+TGG | 0.437067 | 5.1:-2683852 | MS.gene21927:CDS |
| GAAATGAAGCCTGATCATTC+AGG | 0.440675 | 5.1:-2683830 | MS.gene21927:CDS |
| CACTGGTGGAAATGTATTCA+AGG | 0.441791 | 5.1:-2684300 | MS.gene21927:CDS |
| AAATACAGTGATTGGGGAAT+GGG | 0.444323 | 5.1:-2683870 | MS.gene21927:CDS |
| GAGTTATTGGATTATGATAG+TGG | 0.444354 | 5.1:-2685099 | MS.gene21927:CDS |
| GTTTGTGGGATGAAGCGTTT+CGG | 0.453529 | 5.1:-2684894 | MS.gene21927:CDS |
| TGCTGGAGGGTGCTTGCATA+CGG | 0.457944 | 5.1:-2684812 | MS.gene21927:CDS |
| CTGAAGCGAGGACTTATATG+AGG | 0.458680 | 5.1:-2683751 | MS.gene21927:CDS |
| CTGGCATATTTCTGCTCTGT+GGG | 0.460633 | 5.1:+2683313 | None:intergenic |
| TCAAGGGCTATTTATTATTG+TGG | 0.461583 | 5.1:-2684327 | MS.gene21927:CDS |
| TTATAGGAGAATGTTGAGTA+AGG | 0.470042 | 5.1:-2685172 | MS.gene21927:CDS |
| TTTATTATTGTGGAACTCAC+TGG | 0.474936 | 5.1:-2684317 | MS.gene21927:CDS |
| AAGTCTATGGAATAGATCCT+AGG | 0.480925 | 5.1:-2684033 | MS.gene21927:CDS |
| GTGGAAATGTATTCAAGGTC+TGG | 0.481050 | 5.1:-2684295 | MS.gene21927:CDS |
| AAAGCGTGAAGAACAGTTCA+AGG | 0.483033 | 5.1:-2684344 | MS.gene21927:CDS |
| ACATATACTTCCATGATTAT+GGG | 0.484536 | 5.1:-2684217 | MS.gene21927:CDS |
| TTGAGGAGTTGAGTATGATA+GGG | 0.484665 | 5.1:-2683451 | MS.gene21927:CDS |
| AATTATTTGCAGAGATGCGC+AGG | 0.485285 | 5.1:-2684159 | MS.gene21927:CDS |
| CTGGTTATGTACCTAGCAAA+GGG | 0.485835 | 5.1:-2683583 | MS.gene21927:CDS |
| GCATGGTTGATCTCTTTGGA+AGG | 0.490185 | 5.1:-2683994 | MS.gene21927:CDS |
| AATGCGTTGGTGTTTATGTA+TGG | 0.493477 | 5.1:-2685018 | MS.gene21927:CDS |
| TTTGGATGTATGCGAGAGGC+AGG | 0.494006 | 5.1:-2684868 | MS.gene21927:CDS |
| CTCGCCTGAACGAGGGTTGG+AGG | 0.494255 | 5.1:+2683649 | None:intergenic |
| AAGTCTTTGATTCATTAAGC+AGG | 0.495032 | 5.1:-2684252 | MS.gene21927:CDS |
| GTGATTGGGGAATGGGCTGC+AGG | 0.495194 | 5.1:-2683863 | MS.gene21927:CDS |
| AAACAATGACCTGAATGATC+AGG | 0.495888 | 5.1:+2683821 | None:intergenic |
| GTTGAGTAAGGGTGTTATAC+CGG | 0.500072 | 5.1:-2685160 | MS.gene21927:CDS |
| AGACTTCCTCAGATCGATCC+AGG | 0.501181 | 5.1:+2684494 | None:intergenic |
| CGTTGGTGTTTATGTATGGT+AGG | 0.510108 | 5.1:-2685014 | MS.gene21927:CDS |
| GCGCAGGCTCAATATTAAAC+CGG | 0.511581 | 5.1:-2684143 | MS.gene21927:CDS |
| TGAGGGATTCAGGTGTGAAA+AGG | 0.513681 | 5.1:-2683733 | MS.gene21927:CDS |
| AAAATACAGTGATTGGGGAA+TGG | 0.515205 | 5.1:-2683871 | MS.gene21927:CDS |
| CTCATCTGAGGAAGATATTG+AGG | 0.515611 | 5.1:-2683555 | MS.gene21927:CDS |
| AAATTGGGAAAGGAGATTCA+TGG | 0.515772 | 5.1:-2684679 | MS.gene21927:CDS |
| TTGAGGAGTTGAGTATGATA+GGG | 0.515887 | 5.1:-2683538 | MS.gene21927:CDS |
| GATGAGACAACCCCTTTGCT+AGG | 0.516293 | 5.1:+2683572 | None:intergenic |
| AATATACTCATGAAAGATGC+TGG | 0.520355 | 5.1:-2683602 | MS.gene21927:CDS |
| CACACCATATCCCATAATCA+TGG | 0.521051 | 5.1:+2684207 | None:intergenic |
| TGAACTGTTTGATATTATGC+CGG | 0.522657 | 5.1:-2684968 | MS.gene21927:CDS |
| ATAGTGGTGTGAAGGTTCAT+AGG | 0.526174 | 5.1:-2685083 | MS.gene21927:CDS |
| TGCTTGGGTTGATGTTGGCA+GGG | 0.532391 | 5.1:-2683699 | MS.gene21927:CDS |
| AAAGCAAAGGAGGTTATCAC+AGG | 0.532659 | 5.1:-2683956 | MS.gene21927:CDS |
| TTCGAAATAACAAATATGCA+TGG | 0.535300 | 5.1:+2684572 | None:intergenic |
| GCAATTGCCCTTGTGCTACA+AGG | 0.537476 | 5.1:+2684074 | None:intergenic |
| AATGAACTCATCAAAGATGC+TGG | 0.539499 | 5.1:-2683515 | MS.gene21927:CDS |
| TCAGTTGGACTCTGTTGCAA+TGG | 0.539662 | 5.1:-2684740 | MS.gene21927:CDS |
| TCAGGTGTGAAAAGGACTCC+TGG | 0.539667 | 5.1:-2683725 | MS.gene21927:CDS |
| GGTTGTGCTTGGGTTGATGT+TGG | 0.540791 | 5.1:-2683704 | MS.gene21927:CDS |
| CATGAATAGTGCTCAACCCT+AGG | 0.544572 | 5.1:+2684016 | None:intergenic |
| GACGGATAAGTATAATCATC+CGG | 0.546320 | 5.1:+2685141 | None:intergenic |
| GCTCTGTGGGTTGTGCATGT+GGG | 0.546858 | 5.1:+2683326 | None:intergenic |
| CATGGTTGATCTCTTTGGAA+GGG | 0.547255 | 5.1:-2683993 | MS.gene21927:CDS |
| GATGAGACAACCCCTTCGCT+TGG | 0.548394 | 5.1:+2683485 | None:intergenic |
| AGTCTATGGAATAGATCCTA+GGG | 0.551548 | 5.1:-2684032 | MS.gene21927:CDS |
| ATGAGAAAGGTTTGATCACA+TGG | 0.555574 | 5.1:-2684543 | MS.gene21927:CDS |
| CTATTCGAGCGCAAAGGGGA+AGG | 0.555849 | 5.1:+2684407 | None:intergenic |
| GATGTCATGCAAGCCTACTT+CGG | 0.560435 | 5.1:-2683933 | MS.gene21927:CDS |
| GCAAATATGTATGCAGCTGC+TGG | 0.564766 | 5.1:-2683791 | MS.gene21927:CDS |
| TTATGGGATATGGTGTGAGT+GGG | 0.565078 | 5.1:-2684201 | MS.gene21927:CDS |
| ATTAGTTGTTATGCTTCTAG+GGG | 0.565575 | 5.1:-2684916 | MS.gene21927:CDS |
| CACGAAACATCATCTCTAGC+CGG | 0.565911 | 5.1:+2684949 | None:intergenic |
| GTGAGCAAACCCAGAAAGCA+TGG | 0.567831 | 5.1:+2684516 | None:intergenic |
| AATGAGAGCAGTGATTCAGT+TGG | 0.568110 | 5.1:-2684755 | MS.gene21927:CDS |
| GCTGGAGGGTGCTTGCATAC+GGG | 0.569051 | 5.1:-2684811 | MS.gene21927:CDS |
| TTGAATGCATGTTCGCACAT+TGG | 0.570270 | 5.1:-2684709 | MS.gene21927:CDS |
| TATAGGAGAATGTTGAGTAA+GGG | 0.572927 | 5.1:-2685171 | MS.gene21927:CDS |
| GCTGGTTATGTACCTAGCAA+AGG | 0.573198 | 5.1:-2683584 | MS.gene21927:CDS |
| AATCTCGCCTGAACGAGGGT+TGG | 0.573543 | 5.1:+2683646 | None:intergenic |
| CATTCTGGCCTTGTAGCACA+AGG | 0.574961 | 5.1:-2684082 | MS.gene21927:CDS |
| TTTGTTTGTTCATAATGCGT+TGG | 0.575750 | 5.1:-2685031 | MS.gene21927:CDS |
| TGCTCACCTGGATCGATCTG+AGG | 0.576198 | 5.1:-2684500 | MS.gene21927:CDS |
| GTAGCCCATATTGCCGAAGT+AGG | 0.581409 | 5.1:+2683920 | None:intergenic |
| CCACGAAAATACAGTGATTG+GGG | 0.582249 | 5.1:-2683876 | MS.gene21927:CDS |
| TGCGAGAGGCAGGTATTGAA+AGG | 0.584032 | 5.1:-2684858 | MS.gene21927:CDS |
| CGGCTAGAGATGATGTTTCG+TGG | 0.586952 | 5.1:-2684948 | MS.gene21927:CDS |
| TATGGGATATGGTGTGAGTG+GGG | 0.589727 | 5.1:-2684200 | MS.gene21927:CDS |
| CTGGTTATGTACCAAGCGAA+GGG | 0.591081 | 5.1:-2683496 | MS.gene21927:CDS |
| GCTGGTTATGTACCAAGCGA+AGG | 0.593477 | 5.1:-2683497 | MS.gene21927:CDS |
| CCTGGCATATTTCTGCTCTG+TGG | 0.595620 | 5.1:+2683312 | None:intergenic |
| ATTATGGGATATGGTGTGAG+TGG | 0.597677 | 5.1:-2684202 | MS.gene21927:CDS |
| GATTTGCTATTCGAGCGCAA+AGG | 0.597926 | 5.1:+2684401 | None:intergenic |
| AAGGGGAAGGACGCTTGCAA+TGG | 0.597977 | 5.1:+2684420 | None:intergenic |
| GGGGAAATCTCGCCTGAACG+AGG | 0.599918 | 5.1:+2683641 | None:intergenic |
| ATTATTGTGGAACTCACTGG+TGG | 0.602251 | 5.1:-2684314 | MS.gene21927:CDS |
| ATGCAAGCACCCTCCAGCAA+TGG | 0.602815 | 5.1:+2684816 | None:intergenic |
| TTTAGAGAAATGCTACGTGA+GGG | 0.603431 | 5.1:-2684463 | MS.gene21927:CDS |
| GTCGGTTCTTAAGGCTTGTG+GGG | 0.605077 | 5.1:-2685121 | MS.gene21927:CDS |
| TGGTCTTCTCGACAAAGCAA+AGG | 0.606207 | 5.1:-2683969 | MS.gene21927:CDS |
| CCACAGAGCAGAAATATGCC+AGG | 0.608831 | 5.1:-2683312 | MS.gene21927:CDS |
| GGTTGAGCACTATTCATGCA+TGG | 0.608930 | 5.1:-2684011 | MS.gene21927:CDS |
| TGGAGCGGTTAAATTGGGAA+AGG | 0.609503 | 5.1:-2684689 | MS.gene21927:CDS |
| CGAAGGGGTTGTCTCATCTG+AGG | 0.620837 | 5.1:-2683480 | MS.gene21927:CDS |
| TTTGGATATAGAATTTCACT+TGG | 0.622468 | 5.1:-2681066 | MS.gene21927:CDS |
| ACATCAACCCAAGCACAACC+AGG | 0.624128 | 5.1:+2683707 | None:intergenic |
| GGATTATGATAGTGGTGTGA+AGG | 0.624357 | 5.1:-2685091 | MS.gene21927:CDS |
| ATAGCCATATTCCAATGCAA+AGG | 0.624456 | 5.1:+2685240 | None:intergenic |
| TGCATGTTCGCACATTGGAG+CGG | 0.626274 | 5.1:-2684704 | MS.gene21927:CDS |
| ATATGGAATACCATTGCTGG+AGG | 0.630628 | 5.1:-2684826 | MS.gene21927:CDS |
| CAAAGGGGTTGTCTCATCTG+AGG | 0.632913 | 5.1:-2683567 | MS.gene21927:CDS |
| CGAATAGCAAATCTACAACA+TGG | 0.634224 | 5.1:-2684391 | MS.gene21927:CDS |
| GGGAAATCTCGCCTGAACGA+GGG | 0.635094 | 5.1:+2683642 | None:intergenic |
| TCTTCTCGACAAAGCAAAGG+AGG | 0.638973 | 5.1:-2683966 | MS.gene21927:CDS |
| TAAACCGGATCACGTGACAA+TGG | 0.647552 | 5.1:-2684128 | MS.gene21927:CDS |
| CCACAAGCCTTAAGAACCGA+CGG | 0.655346 | 5.1:+2685123 | None:intergenic |
| TGAAGCGAGGACTTATATGA+GGG | 0.659547 | 5.1:-2683750 | MS.gene21927:CDS |
| TAGGTTTGGGAAGTTAGAGG+TGG | 0.661523 | 5.1:-2684995 | MS.gene21927:CDS |
| ATGGTTGAGATCTCTACACC+TGG | 0.662356 | 5.1:+2684591 | None:intergenic |
| AAGCGTGAAGAACAGTTCAA+GGG | 0.662460 | 5.1:-2684343 | MS.gene21927:CDS |
| CGAACAAAGAAGCTGAAGCG+AGG | 0.668650 | 5.1:-2683763 | MS.gene21927:CDS |
| GTTATTTGGATGTATGCGAG+AGG | 0.678024 | 5.1:-2684872 | MS.gene21927:CDS |
| GGATGATTATACTTATCCGT+CGG | 0.680643 | 5.1:-2685139 | MS.gene21927:CDS |
| AGCATAATTGAAGAGTACAT+CGG | 0.680852 | 5.1:-2683283 | MS.gene21927:intron |
| TATGGAATACCATTGCTGGA+GGG | 0.683127 | 5.1:-2684825 | MS.gene21927:CDS |
| TGGTTATGTACCAAGCGAAG+GGG | 0.700686 | 5.1:-2683495 | MS.gene21927:CDS |
| TTTGCTATTCGAGCGCAAAG+GGG | 0.709901 | 5.1:+2684403 | None:intergenic |
| ATTCTGGCCTTGTAGCACAA+GGG | 0.730147 | 5.1:-2684081 | MS.gene21927:CDS |
| AAGCAAAGGAGGTTATCACA+GGG | 0.738228 | 5.1:-2683955 | MS.gene21927:CDS |
| TGGTTATGTACCTAGCAAAG+GGG | 0.742221 | 5.1:-2683582 | MS.gene21927:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGCTTTTTTTTTTTTTTTA+CGG | + | chr5.1:2684377-2684396 | None:intergenic | 10.0% |
| !!! | TTTTTATGTAAAAAAAGATT+AGG | - | chr5.1:2684435-2684454 | MS.gene21927:CDS | 10.0% |
| !!! | AGGTTTTTATATTATGAAAT+AGG | - | chr5.1:2684455-2684474 | MS.gene21927:CDS | 15.0% |
| !!! | ATATTTGTTATTTCGAAAAA+TGG | - | chr5.1:2681725-2681744 | MS.gene21927:intron | 15.0% |
| !!! | GGTTTTTATATTATGAAATA+GGG | - | chr5.1:2684456-2684475 | MS.gene21927:CDS | 15.0% |
| !!! | TTTTATTGAAGAAAATTGAT+TGG | - | chr5.1:2683690-2683709 | MS.gene21927:CDS | 15.0% |
| !! | AAAAACTACAAAAGTAAATG+AGG | + | chr5.1:2685021-2685040 | None:intergenic | 20.0% |
| !! | AAAACTACAAAAGTAAATGA+GGG | + | chr5.1:2685020-2685039 | None:intergenic | 20.0% |
| !! | AAAAGAATATTGCTGAAAAA+TGG | + | chr5.1:2684606-2684625 | None:intergenic | 20.0% |
| !! | AAAGAATATTGCTGAAAAAT+GGG | + | chr5.1:2684605-2684624 | None:intergenic | 20.0% |
| !! | AACATTGAGAATAATAGTAT+GGG | + | chr5.1:2684690-2684709 | None:intergenic | 20.0% |
| !! | AATTTATAAGGCAACTATTA+AGG | + | chr5.1:2685279-2685298 | None:intergenic | 20.0% |
| !! | ACACTTTGTTAAATTTCTAT+AGG | - | chr5.1:2684810-2684829 | MS.gene21927:CDS | 20.0% |
| !! | ATTTATAAGGCAACTATTAA+GGG | + | chr5.1:2685278-2685297 | None:intergenic | 20.0% |
| !! | TAACATTGAGAATAATAGTA+TGG | + | chr5.1:2684691-2684710 | None:intergenic | 20.0% |
| !! | TGAAAAAGATTAGAAAATGA+AGG | + | chr5.1:2683145-2683164 | None:intergenic | 20.0% |
| !! | TTGAAAGGAATGTTATTATA+TGG | - | chr5.1:2681448-2681467 | MS.gene21927:intron | 20.0% |
| !!! | AAAATCGTGTTGTATAATTT+TGG | - | chr5.1:2683806-2683825 | MS.gene21927:CDS | 20.0% |
| !!! | AAGAAAGAACAGTTTATTTT+TGG | + | chr5.1:2684632-2684651 | None:intergenic | 20.0% |
| !!! | TCATTATTTTGTTTTGCTTT+GGG | - | chr5.1:2684246-2684265 | MS.gene21927:CDS | 20.0% |
| ! | ACATATACTTCCATGATTAT+GGG | - | chr5.1:2682074-2682093 | MS.gene21927:intron | 25.0% |
| ! | ACATTGAGAATAATAGTATG+GGG | + | chr5.1:2684689-2684708 | None:intergenic | 25.0% |
| ! | AGAATGCAATTTCTGTTTAT+AGG | - | chr5.1:2681103-2681122 | MS.gene21927:intron | 25.0% |
| ! | AGTCAATGTAAAGATATTAC+AGG | - | chr5.1:2683507-2683526 | MS.gene21927:CDS | 25.0% |
| ! | CAAAGCAAAACAAAATAATG+AGG | + | chr5.1:2684247-2684266 | None:intergenic | 25.0% |
| ! | CATTAATTACAATGTATTCC+AGG | - | chr5.1:2681682-2681701 | MS.gene21927:intron | 25.0% |
| ! | CTATTATGTGTATATAGCTT+TGG | - | chr5.1:2683598-2683617 | MS.gene21927:CDS | 25.0% |
| ! | GTGAATCTTTATATACATCT+TGG | - | chr5.1:2684744-2684763 | MS.gene21927:CDS | 25.0% |
| ! | GTTTATCGATGAAAATTATG+TGG | - | chr5.1:2683570-2683589 | MS.gene21927:CDS | 25.0% |
| ! | TAATTTGAATAACTCGTTTC+TGG | + | chr5.1:2685060-2685079 | None:intergenic | 25.0% |
| ! | TATGTTTATGTTAGTATCTG+TGG | + | chr5.1:2684562-2684581 | None:intergenic | 25.0% |
| ! | TTAAATTTCTATAGGATCCA+TGG | - | chr5.1:2684818-2684837 | MS.gene21927:CDS | 25.0% |
| ! | TTCGAAATAACAAATATGCA+TGG | + | chr5.1:2681722-2681741 | None:intergenic | 25.0% |
| ! | TTTGGATATAGAATTTCACT+TGG | - | chr5.1:2685225-2685244 | MS.gene21927:CDS | 25.0% |
| !! | ATATTCATCCTTTTCATCAA+GGG | + | chr5.1:2682674-2682693 | None:intergenic | 25.0% |
| !! | TATATTCATCCTTTTCATCA+AGG | + | chr5.1:2682675-2682694 | None:intergenic | 25.0% |
| !! | TTTTTGTGTTGTATATGGTT+TGG | - | chr5.1:2684125-2684144 | MS.gene21927:CDS | 25.0% |
| !!! | CTCATTATTTTGTTTTGCTT+TGG | - | chr5.1:2684245-2684264 | MS.gene21927:CDS | 25.0% |
| !!! | GTATTTTATTTTTGTACAGC+AGG | - | chr5.1:2685080-2685099 | MS.gene21927:CDS | 25.0% |
| !!! | GTTTGTTTTTGTGTTGTATA+TGG | - | chr5.1:2684120-2684139 | MS.gene21927:CDS | 25.0% |
| !!! | TATACAACACGATTTTAATG+AGG | + | chr5.1:2683802-2683821 | None:intergenic | 25.0% |
| !!! | TATTTGGTGTATTATGTTGT+AGG | - | chr5.1:2685193-2685212 | MS.gene21927:CDS | 25.0% |
| AACAAAGAAACAGATACGAA+TGG | + | chr5.1:2684307-2684326 | None:intergenic | 30.0% | |
| AACAACATTTGCTTATAGAG+TGG | + | chr5.1:2683173-2683192 | None:intergenic | 30.0% | |
| AACTATCTTAGCAGTTAGTT+AGG | + | chr5.1:2684190-2684209 | None:intergenic | 30.0% | |
| AAGTCTTTGATTCATTAAGC+AGG | - | chr5.1:2682039-2682058 | MS.gene21927:intron | 30.0% | |
| AATAACTCACGAGAAAAGAA+AGG | + | chr5.1:2683847-2683866 | None:intergenic | 30.0% | |
| AATATACTCATGAAAGATGC+TGG | - | chr5.1:2682689-2682708 | MS.gene21927:intron | 30.0% | |
| AATATTGCTGAAAAATGGGT+AGG | + | chr5.1:2684601-2684620 | None:intergenic | 30.0% | |
| AGAAAGATGATAGAAGTCTA+TGG | - | chr5.1:2682245-2682264 | MS.gene21927:intron | 30.0% | |
| ATAACTCACGAGAAAAGAAA+GGG | + | chr5.1:2683846-2683865 | None:intergenic | 30.0% | |
| ATTAGACCTGAAATAAGTGA+CGG | + | chr5.1:2683351-2683370 | None:intergenic | 30.0% | |
| ATTAGTTGTTATGCTTCTAG+GGG | - | chr5.1:2681375-2681394 | MS.gene21927:intron | 30.0% | |
| ATTATATGGAATACCATTGC+TGG | - | chr5.1:2681462-2681481 | MS.gene21927:intron | 30.0% | |
| ATTCATGTACTTAAAACACG+TGG | - | chr5.1:2682904-2682923 | MS.gene21927:intron | 30.0% | |
| ATTTAACAGTTATGCAGTCA+CGG | - | chr5.1:2683072-2683091 | MS.gene21927:intron | 30.0% | |
| CACATATACTTCCATGATTA+TGG | - | chr5.1:2682073-2682092 | MS.gene21927:intron | 30.0% | |
| CATGAACAAATGCAAAAAAG+AGG | + | chr5.1:2683280-2683299 | None:intergenic | 30.0% | |
| CATTAACAGACATATGATCA+GGG | + | chr5.1:2683254-2683273 | None:intergenic | 30.0% | |
| GAGTTATTGGATTATGATAG+TGG | - | chr5.1:2681192-2681211 | MS.gene21927:intron | 30.0% | |
| GTAGTGATTCTACTGATATT+TGG | - | chr5.1:2685177-2685196 | MS.gene21927:CDS | 30.0% | |
| TAATGAATCAAAGACTTTCC+TGG | + | chr5.1:2682036-2682055 | None:intergenic | 30.0% | |
| TAGAGGATCAAAGATTACAT+CGG | - | chr5.1:2684904-2684923 | MS.gene21927:CDS | 30.0% | |
| TATAGGAGAATGTTGAGTAA+GGG | - | chr5.1:2681120-2681139 | MS.gene21927:intron | 30.0% | |
| TATTCCTTGGCTCATTTAAT+AGG | + | chr5.1:2683486-2683505 | None:intergenic | 30.0% | |
| TCAAGGGCTATTTATTATTG+TGG | - | chr5.1:2681964-2681983 | MS.gene21927:intron | 30.0% | |
| TCTCTTAGTCAATTACTACA+TGG | + | chr5.1:2683900-2683919 | None:intergenic | 30.0% | |
| TCTTTATATACATCTTGGTG+TGG | - | chr5.1:2684749-2684768 | MS.gene21927:CDS | 30.0% | |
| TGAACTGTTTGATATTATGC+CGG | - | chr5.1:2681323-2681342 | MS.gene21927:intron | 30.0% | |
| TGGTTACAAACTAAATGACT+TGG | - | chr5.1:2683315-2683334 | MS.gene21927:CDS | 30.0% | |
| TGTTTATGTATGGTAGGTTT+GGG | - | chr5.1:2681283-2681302 | MS.gene21927:intron | 30.0% | |
| TTATAGGAGAATGTTGAGTA+AGG | - | chr5.1:2681119-2681138 | MS.gene21927:intron | 30.0% | |
| TTGACTAAGAGAAAATCACA+AGG | - | chr5.1:2683908-2683927 | MS.gene21927:CDS | 30.0% | |
| TTTATTATTGTGGAACTCAC+TGG | - | chr5.1:2681974-2681993 | MS.gene21927:intron | 30.0% | |
| TTTCGAAAAATGGATGAGAA+AGG | - | chr5.1:2681735-2681754 | MS.gene21927:intron | 30.0% | |
| TTTGTTTGTTCATAATGCGT+TGG | - | chr5.1:2681260-2681279 | MS.gene21927:intron | 30.0% | |
| ! | AATGCACATACTCTTTTATC+TGG | - | chr5.1:2683634-2683653 | MS.gene21927:CDS | 30.0% |
| ! | AGCATAATTGAAGAGTACAT+CGG | - | chr5.1:2683008-2683027 | MS.gene21927:intron | 30.0% |
| ! | CTTTATATACATCTTGGTGT+GGG | - | chr5.1:2684750-2684769 | MS.gene21927:CDS | 30.0% |
| ! | GATTAGTTGTTATGCTTCTA+GGG | - | chr5.1:2681374-2681393 | MS.gene21927:intron | 30.0% |
| ! | TAGCATTTCTCTAAAAAGGA+AGG | + | chr5.1:2681823-2681842 | None:intergenic | 30.0% |
| ! | TATTCATCCTTTTCATCAAG+GGG | + | chr5.1:2682673-2682692 | None:intergenic | 30.0% |
| ! | TCACTTATTTCAGGTCTAAT+TGG | - | chr5.1:2683351-2683370 | MS.gene21927:CDS | 30.0% |
| ! | TGATTAGTTGTTATGCTTCT+AGG | - | chr5.1:2681373-2681392 | MS.gene21927:intron | 30.0% |
| ! | TGCATACGGGAAATTTTATA+GGG | - | chr5.1:2681493-2681512 | MS.gene21927:intron | 30.0% |
| ! | TTGCATACGGGAAATTTTAT+AGG | - | chr5.1:2681492-2681511 | MS.gene21927:intron | 30.0% |
| ! | TTTTCATCGATAAACAGACA+AGG | + | chr5.1:2683565-2683584 | None:intergenic | 30.0% |
| !! | AAAGCATTTTCTTAGTCCTT+GGG | - | chr5.1:2684390-2684409 | MS.gene21927:CDS | 30.0% |
| !! | TTTACATTGACTCTATTCCT+TGG | + | chr5.1:2683499-2683518 | None:intergenic | 30.0% |
| !!! | AAAAGCATTTTCTTAGTCCT+TGG | - | chr5.1:2684389-2684408 | MS.gene21927:CDS | 30.0% |
| !!! | ATAGTTTTGATCCTTTGCAT+TGG | - | chr5.1:2681040-2681059 | MS.gene21927:CDS | 30.0% |
| !!! | ATATGGTTTGGTTTTACAGT+TGG | - | chr5.1:2684137-2684156 | MS.gene21927:CDS | 30.0% |
| !!! | CGTTGATTTGATTGAAGTTT+TGG | - | chr5.1:2683713-2683732 | MS.gene21927:CDS | 30.0% |
| !!! | GTTGTTAACAGTTTTGTTTG+TGG | - | chr5.1:2684937-2684956 | MS.gene21927:CDS | 30.0% |
| !!! | TATGGTTTGGTTTTACAGTT+GGG | - | chr5.1:2684138-2684157 | MS.gene21927:CDS | 30.0% |
| AAAAATTGATCCGCACAAAC+TGG | + | chr5.1:2684029-2684048 | None:intergenic | 35.0% | |
| AAAATACAGTGATTGGGGAA+TGG | - | chr5.1:2682420-2682439 | MS.gene21927:intron | 35.0% | |
| AAACAATGACCTGAATGATC+AGG | + | chr5.1:2682473-2682492 | None:intergenic | 35.0% | |
| AAATACAGTGATTGGGGAAT+GGG | - | chr5.1:2682421-2682440 | MS.gene21927:intron | 35.0% | |
| AAATTGGGAAAGGAGATTCA+TGG | - | chr5.1:2681612-2681631 | MS.gene21927:intron | 35.0% | |
| AAGTCTATGGAATAGATCCT+AGG | - | chr5.1:2682258-2682277 | MS.gene21927:intron | 35.0% | |
| AATAATAGTATGGGGCAAGA+AGG | + | chr5.1:2684681-2684700 | None:intergenic | 35.0% | |
| AATGAACTCATCAAAGATGC+TGG | - | chr5.1:2682776-2682795 | MS.gene21927:intron | 35.0% | |
| ACTCTGTCTTTACATGCATA+TGG | - | chr5.1:2683430-2683449 | MS.gene21927:intron | 35.0% | |
| ACTTCCATGATTATGGGATA+TGG | - | chr5.1:2682080-2682099 | MS.gene21927:intron | 35.0% | |
| AGTAGAATCACTACATCAAG+AGG | + | chr5.1:2685171-2685190 | None:intergenic | 35.0% | |
| AGTCTATGGAATAGATCCTA+GGG | - | chr5.1:2682259-2682278 | MS.gene21927:intron | 35.0% | |
| AGTTCGTCTACTCATAGAAA+CGG | - | chr5.1:2684093-2684112 | MS.gene21927:CDS | 35.0% | |
| ATAGCCATATTCCAATGCAA+AGG | + | chr5.1:2681054-2681073 | None:intergenic | 35.0% | |
| ATCCACGAAAATACAGTGAT+TGG | - | chr5.1:2682413-2682432 | MS.gene21927:intron | 35.0% | |
| ATGAGAAAGGTTTGATCACA+TGG | - | chr5.1:2681748-2681767 | MS.gene21927:intron | 35.0% | |
| ATTGAGGAGTTGAGTATGAT+AGG | - | chr5.1:2682752-2682771 | MS.gene21927:intron | 35.0% | |
| CAGTTTCAACACTGTACTTT+AGG | + | chr5.1:2683980-2683999 | None:intergenic | 35.0% | |
| CGAATAGCAAATCTACAACA+TGG | - | chr5.1:2681900-2681919 | MS.gene21927:intron | 35.0% | |
| CTTGCAATGGTCACATAATT+AGG | + | chr5.1:2681861-2681880 | None:intergenic | 35.0% | |
| GAATGGCACTGCAAATATAT+GGG | + | chr5.1:2684290-2684309 | None:intergenic | 35.0% | |
| GACGGATAAGTATAATCATC+CGG | + | chr5.1:2681153-2681172 | None:intergenic | 35.0% | |
| GCATTAACAGACATATGATC+AGG | + | chr5.1:2683255-2683274 | None:intergenic | 35.0% | |
| GGATGATTATACTTATCCGT+CGG | - | chr5.1:2681152-2681171 | MS.gene21927:intron | 35.0% | |
| GTGTTTATGTATGGTAGGTT+TGG | - | chr5.1:2681282-2681301 | MS.gene21927:intron | 35.0% | |
| GTTTGTAACCACATTACAGA+AGG | + | chr5.1:2683306-2683325 | None:intergenic | 35.0% | |
| TACTACATGGTAAGCATAGA+CGG | + | chr5.1:2683887-2683906 | None:intergenic | 35.0% | |
| TATAGAGTACAACAATCCCA+AGG | + | chr5.1:2684409-2684428 | None:intergenic | 35.0% | |
| TCCACGAAAATACAGTGATT+GGG | - | chr5.1:2682414-2682433 | MS.gene21927:intron | 35.0% | |
| TCGAACTCGATCAATAAACA+TGG | + | chr5.1:2684986-2685005 | None:intergenic | 35.0% | |
| TCTCGTGAGTTATTACAAGT+AGG | - | chr5.1:2683853-2683872 | MS.gene21927:CDS | 35.0% | |
| TGATCCTTTGCATTGGAATA+TGG | - | chr5.1:2681047-2681066 | MS.gene21927:CDS | 35.0% | |
| TGTGGAAATCTTTGCAGAAT+TGG | - | chr5.1:2684955-2684974 | MS.gene21927:CDS | 35.0% | |
| TGTTCCTATTAAATGAGCCA+AGG | - | chr5.1:2683479-2683498 | MS.gene21927:CDS | 35.0% | |
| TTAGACCTGAAATAAGTGAC+GGG | + | chr5.1:2683350-2683369 | None:intergenic | 35.0% | |
| TTCAGCAGAGTTCTATTAAG+TGG | - | chr5.1:2681235-2681254 | MS.gene21927:intron | 35.0% | |
| TTGAGGAGTTGAGTATGATA+GGG | - | chr5.1:2682753-2682772 | MS.gene21927:intron | 35.0% | |
| TTGGTGTATTATGTTGTAGG+TGG | - | chr5.1:2685196-2685215 | MS.gene21927:CDS | 35.0% | |
| TTTAGAGAAATGCTACGTGA+GGG | - | chr5.1:2681828-2681847 | MS.gene21927:intron | 35.0% | |
| TTTGAGGAGTTGAGTATGAT+AGG | - | chr5.1:2682839-2682858 | MS.gene21927:intron | 35.0% | |
| ! | AAGTTGATTTCATGGCTTAG+AGG | - | chr5.1:2684887-2684906 | MS.gene21927:CDS | 35.0% |
| ! | AATGCGTTGGTGTTTATGTA+TGG | - | chr5.1:2681273-2681292 | MS.gene21927:intron | 35.0% |
| ! | ATTCATCCTTTTCATCAAGG+GGG | + | chr5.1:2682672-2682691 | None:intergenic | 35.0% |
| ! | CACGTAGCATTTCTCTAAAA+AGG | + | chr5.1:2681827-2681846 | None:intergenic | 35.0% |
| ! | CGGATCAATTTTTGTAGTTC+GGG | - | chr5.1:2684036-2684055 | MS.gene21927:CDS | 35.0% |
| ! | GCATACGGGAAATTTTATAG+GGG | - | chr5.1:2681494-2681513 | MS.gene21927:intron | 35.0% |
| ! | GCGGATCAATTTTTGTAGTT+CGG | - | chr5.1:2684035-2684054 | MS.gene21927:CDS | 35.0% |
| ! | TAACTCGTTTCTGGAAATCA+AGG | + | chr5.1:2685051-2685070 | None:intergenic | 35.0% |
| ! | TTCAGGTCATTGTTTGTTGA+TGG | - | chr5.1:2682478-2682497 | MS.gene21927:intron | 35.0% |
| !! | AGCTTGTTGCATTAACATCA+TGG | + | chr5.1:2683099-2683118 | None:intergenic | 35.0% |
| !! | CAATTTTTGTAGTTCGGGTT+CGG | - | chr5.1:2684041-2684060 | MS.gene21927:CDS | 35.0% |
| !! | CAGAACCAAAGCATTTTCTT+CGG | - | chr5.1:2684221-2684240 | MS.gene21927:CDS | 35.0% |
| !! | GAAGAAAATGCTTTGGTTCT+GGG | + | chr5.1:2684222-2684241 | None:intergenic | 35.0% |
| !! | TTGTTTTGCTTTGGGTGTTT+GGG | - | chr5.1:2684254-2684273 | MS.gene21927:CDS | 35.0% |
| !! | TTTTAGAGAAATGCTACGTG+AGG | - | chr5.1:2681827-2681846 | MS.gene21927:intron | 35.0% |
| !!! | TTTGTTTTGCTTTGGGTGTT+TGG | - | chr5.1:2684253-2684272 | MS.gene21927:CDS | 35.0% |
| AAAGCAAAGGAGGTTATCAC+AGG | - | chr5.1:2682335-2682354 | MS.gene21927:intron | 40.0% | |
| AAAGCGTGAAGAACAGTTCA+AGG | - | chr5.1:2681947-2681966 | MS.gene21927:intron | 40.0% | |
| AAGCAAAGGAGGTTATCACA+GGG | - | chr5.1:2682336-2682355 | MS.gene21927:intron | 40.0% | |
| AAGCGTGAAGAACAGTTCAA+GGG | - | chr5.1:2681948-2681967 | MS.gene21927:intron | 40.0% | |
| AATGAGAGCAGTGATTCAGT+TGG | - | chr5.1:2681536-2681555 | MS.gene21927:intron | 40.0% | |
| AATTATTTGCAGAGATGCGC+AGG | - | chr5.1:2682132-2682151 | MS.gene21927:intron | 40.0% | |
| ACGGCAAATTTATTACGACG+AGG | + | chr5.1:2684358-2684377 | None:intergenic | 40.0% | |
| AGATTACATCGGAGAGAAGA+AGG | - | chr5.1:2684915-2684934 | MS.gene21927:CDS | 40.0% | |
| AGATTTCCCCCTTGATGAAA+AGG | - | chr5.1:2682663-2682682 | MS.gene21927:intron | 40.0% | |
| AGGACTTATATGAGGGATTC+AGG | - | chr5.1:2682548-2682567 | MS.gene21927:intron | 40.0% | |
| ATAGTGGTGTGAAGGTTCAT+AGG | - | chr5.1:2681208-2681227 | MS.gene21927:intron | 40.0% | |
| ATATGGAATACCATTGCTGG+AGG | - | chr5.1:2681465-2681484 | MS.gene21927:intron | 40.0% | |
| ATTATGGGATATGGTGTGAG+TGG | - | chr5.1:2682089-2682108 | MS.gene21927:intron | 40.0% | |
| ATTATTGTGGAACTCACTGG+TGG | - | chr5.1:2681977-2681996 | MS.gene21927:intron | 40.0% | |
| CACACCATATCCCATAATCA+TGG | + | chr5.1:2682087-2682106 | None:intergenic | 40.0% | |
| CACATTGGAGCGGTTAAATT+GGG | - | chr5.1:2681597-2681616 | MS.gene21927:intron | 40.0% | |
| CACTGGTGGAAATGTATTCA+AGG | - | chr5.1:2681991-2682010 | MS.gene21927:intron | 40.0% | |
| CCACGAAAATACAGTGATTG+GGG | - | chr5.1:2682415-2682434 | MS.gene21927:intron | 40.0% | |
| CCTCAACAATGGAGATAAGA+AGG | - | chr5.1:2684848-2684867 | MS.gene21927:CDS | 40.0% | |
| CCTTCTTATCTCCATTGTTG+AGG | + | chr5.1:2684851-2684870 | None:intergenic | 40.0% | |
| CGAATGGCACTGCAAATATA+TGG | + | chr5.1:2684291-2684310 | None:intergenic | 40.0% | |
| CTAACAGCATGTAGTCATTC+TGG | - | chr5.1:2682194-2682213 | MS.gene21927:intron | 40.0% | |
| CTCATCTGAGGAAGATATTG+AGG | - | chr5.1:2682736-2682755 | MS.gene21927:intron | 40.0% | |
| CTGGTTATGTACCTAGCAAA+GGG | - | chr5.1:2682708-2682727 | MS.gene21927:intron | 40.0% | |
| GAAATGAAGCCTGATCATTC+AGG | - | chr5.1:2682461-2682480 | MS.gene21927:intron | 40.0% | |
| GGAGATAAGAAGGCTGTTAA+TGG | - | chr5.1:2684858-2684877 | MS.gene21927:CDS | 40.0% | |
| GTACAGCAGGTAATCTTTAG+AGG | - | chr5.1:2685093-2685112 | MS.gene21927:CDS | 40.0% | |
| GTCTACTCATAGAAACGGTT+TGG | - | chr5.1:2684098-2684117 | MS.gene21927:CDS | 40.0% | |
| GTGGAAATGTATTCAAGGTC+TGG | - | chr5.1:2681996-2682015 | MS.gene21927:intron | 40.0% | |
| GTTATTTGGATGTATGCGAG+AGG | - | chr5.1:2681419-2681438 | MS.gene21927:intron | 40.0% | |
| TAGACCTGAAATAAGTGACG+GGG | + | chr5.1:2683349-2683368 | None:intergenic | 40.0% | |
| TATGAGTAGACGAACTGAAC+TGG | + | chr5.1:2684089-2684108 | None:intergenic | 40.0% | |
| TATGGAATACCATTGCTGGA+GGG | - | chr5.1:2681466-2681485 | MS.gene21927:intron | 40.0% | |
| TCATGCATCCTTCTGTAATG+TGG | - | chr5.1:2683295-2683314 | MS.gene21927:CDS | 40.0% | |
| TCATGCATGGTTGATCTCTT+TGG | - | chr5.1:2682293-2682312 | MS.gene21927:intron | 40.0% | |
| TGAAGCGAGGACTTATATGA+GGG | - | chr5.1:2682541-2682560 | MS.gene21927:intron | 40.0% | |
| TGGTTATGTACCTAGCAAAG+GGG | - | chr5.1:2682709-2682728 | MS.gene21927:intron | 40.0% | |
| TGTGGGTTTATGCAATCTTG+TGG | - | chr5.1:2684767-2684786 | MS.gene21927:CDS | 40.0% | |
| TTATGGGATATGGTGTGAGT+GGG | - | chr5.1:2682090-2682109 | MS.gene21927:intron | 40.0% | |
| TTATTACGACGAGGATTGCA+AGG | + | chr5.1:2684349-2684368 | None:intergenic | 40.0% | |
| TTGAATGCATGTTCGCACAT+TGG | - | chr5.1:2681582-2681601 | MS.gene21927:intron | 40.0% | |
| ! | CATGGTTGATCTCTTTGGAA+GGG | - | chr5.1:2682298-2682317 | MS.gene21927:intron | 40.0% |
| ! | CGAAGAAAATGCTTTGGTTC+TGG | + | chr5.1:2684223-2684242 | None:intergenic | 40.0% |
| ! | CGTTGGTGTTTATGTATGGT+AGG | - | chr5.1:2681277-2681296 | MS.gene21927:intron | 40.0% |
| ! | CTCATCTGAGGAAGATTTTG+AGG | - | chr5.1:2682823-2682842 | MS.gene21927:intron | 40.0% |
| ! | GATGAAGCGTTTCGGTTATT+TGG | - | chr5.1:2681405-2681424 | MS.gene21927:intron | 40.0% |
| ! | GCAATATGGGCTACTCTAAT+AGG | - | chr5.1:2682380-2682399 | MS.gene21927:intron | 40.0% |
| ! | GGTGCAAGAAGTTGATTTCA+TGG | - | chr5.1:2684879-2684898 | MS.gene21927:CDS | 40.0% |
| ! | TTATGCTTCTAGGGGTTTGT+GGG | - | chr5.1:2681383-2681402 | MS.gene21927:intron | 40.0% |
| ! | TTCAATTATGCTGCTTGACC+TGG | + | chr5.1:2683000-2683019 | None:intergenic | 40.0% |
| !! | AGTTTTGGCATATGCAAAGC+AGG | - | chr5.1:2683728-2683747 | MS.gene21927:CDS | 40.0% |
| !! | ATTTGCTATTCGAGCGCAAA+GGG | + | chr5.1:2681892-2681911 | None:intergenic | 40.0% |
| !! | GGATTATGATAGTGGTGTGA+AGG | - | chr5.1:2681200-2681219 | MS.gene21927:intron | 40.0% |
| !! | GTTGAGTAAGGGTGTTATAC+CGG | - | chr5.1:2681131-2681150 | MS.gene21927:intron | 40.0% |
| !! | GTTTTGGCATATGCAAAGCA+GGG | - | chr5.1:2683729-2683748 | MS.gene21927:CDS | 40.0% |
| !! | TACTTATCCGTCGGTTCTTA+AGG | - | chr5.1:2681161-2681180 | MS.gene21927:intron | 40.0% |
| !!! | AGCATTGTCCCTTTTTAGCT+GGG | - | chr5.1:2682615-2682634 | MS.gene21927:intron | 40.0% |
| !!! | TAGGGTGAGAGTGCTTTTAT+TGG | - | chr5.1:2684474-2684493 | MS.gene21927:CDS | 40.0% |
| AAGCAGGGTCATGGACAATT+TGG | - | chr5.1:2683744-2683763 | MS.gene21927:CDS | 45.0% | |
| ACATGGAATGCCATGCTTTC+TGG | - | chr5.1:2681765-2681784 | MS.gene21927:intron | 45.0% | |
| AGTGAGATCACCAGTTTGTG+CGG | - | chr5.1:2684016-2684035 | MS.gene21927:CDS | 45.0% | |
| ATAGTATGGGGCAAGAAGGA+AGG | + | chr5.1:2684677-2684696 | None:intergenic | 45.0% | |
| ATGGCATCTGTCCTCAACAA+TGG | - | chr5.1:2684837-2684856 | MS.gene21927:CDS | 45.0% | |
| ATGGTTGAGATCTCTACACC+TGG | + | chr5.1:2681703-2681722 | None:intergenic | 45.0% | |
| ATTGTTGAGGACAGATGCCA+TGG | + | chr5.1:2684838-2684857 | None:intergenic | 45.0% | |
| CAAGCCTACTTCGGCAATAT+GGG | - | chr5.1:2682367-2682386 | MS.gene21927:intron | 45.0% | |
| CACGAAACATCATCTCTAGC+CGG | + | chr5.1:2681345-2681364 | None:intergenic | 45.0% | |
| CATGAATAGTGCTCAACCCT+AGG | + | chr5.1:2682278-2682297 | None:intergenic | 45.0% | |
| CATGGAATGCCATGCTTTCT+GGG | - | chr5.1:2681766-2681785 | MS.gene21927:intron | 45.0% | |
| CTGAAGCGAGGACTTATATG+AGG | - | chr5.1:2682540-2682559 | MS.gene21927:intron | 45.0% | |
| CTGGTTATGTACCAAGCGAA+GGG | - | chr5.1:2682795-2682814 | MS.gene21927:intron | 45.0% | |
| GACTCTGTTGCAATGGTTGT+TGG | - | chr5.1:2681558-2681577 | MS.gene21927:intron | 45.0% | |
| GATGTCATGCAAGCCTACTT+CGG | - | chr5.1:2682358-2682377 | MS.gene21927:intron | 45.0% | |
| GCAAATATGTATGCAGCTGC+TGG | - | chr5.1:2682500-2682519 | MS.gene21927:intron | 45.0% | |
| GCACATTGGAGCGGTTAAAT+TGG | - | chr5.1:2681596-2681615 | MS.gene21927:intron | 45.0% | |
| GCATGGTTGATCTCTTTGGA+AGG | - | chr5.1:2682297-2682316 | MS.gene21927:intron | 45.0% | |
| GCGCAGGCTCAATATTAAAC+CGG | - | chr5.1:2682148-2682167 | MS.gene21927:intron | 45.0% | |
| GCTGGTTATGTACCTAGCAA+AGG | - | chr5.1:2682707-2682726 | MS.gene21927:intron | 45.0% | |
| GGTTGAGCACTATTCATGCA+TGG | - | chr5.1:2682280-2682299 | MS.gene21927:intron | 45.0% | |
| TAAACCGGATCACGTGACAA+TGG | - | chr5.1:2682163-2682182 | MS.gene21927:intron | 45.0% | |
| TAAGGCTTGTGGGGAGTTAT+TGG | - | chr5.1:2681179-2681198 | MS.gene21927:intron | 45.0% | |
| TAGGTTTGGGAAGTTAGAGG+TGG | - | chr5.1:2681296-2681315 | MS.gene21927:intron | 45.0% | |
| TATGGGATATGGTGTGAGTG+GGG | - | chr5.1:2682091-2682110 | MS.gene21927:intron | 45.0% | |
| TCAGTTGGACTCTGTTGCAA+TGG | - | chr5.1:2681551-2681570 | MS.gene21927:intron | 45.0% | |
| TCTTCTCGACAAAGCAAAGG+AGG | - | chr5.1:2682325-2682344 | MS.gene21927:intron | 45.0% | |
| TGAGGCCGAAGAAAATGCTT+TGG | + | chr5.1:2684229-2684248 | None:intergenic | 45.0% | |
| TGAGGGATTCAGGTGTGAAA+AGG | - | chr5.1:2682558-2682577 | MS.gene21927:intron | 45.0% | |
| TGGAGCGGTTAAATTGGGAA+AGG | - | chr5.1:2681602-2681621 | MS.gene21927:intron | 45.0% | |
| TGGTAGGTTTGGGAAGTTAG+AGG | - | chr5.1:2681293-2681312 | MS.gene21927:intron | 45.0% | |
| TGGTCTTCTCGACAAAGCAA+AGG | - | chr5.1:2682322-2682341 | MS.gene21927:intron | 45.0% | |
| TGGTTATGTACCAAGCGAAG+GGG | - | chr5.1:2682796-2682815 | MS.gene21927:intron | 45.0% | |
| ! | CCCCAATCACTGTATTTTCG+TGG | + | chr5.1:2682418-2682437 | None:intergenic | 45.0% |
| ! | CTGGCATATTTCTGCTCTGT+GGG | + | chr5.1:2682981-2683000 | None:intergenic | 45.0% |
| ! | GTTATGCTTCTAGGGGTTTG+TGG | - | chr5.1:2681382-2681401 | MS.gene21927:intron | 45.0% |
| ! | GTTTGTGGGATGAAGCGTTT+CGG | - | chr5.1:2681397-2681416 | MS.gene21927:intron | 45.0% |
| !! | ATTCTGGCCTTGTAGCACAA+GGG | - | chr5.1:2682210-2682229 | MS.gene21927:intron | 45.0% |
| !! | GAGCATTGTCCCTTTTTAGC+TGG | - | chr5.1:2682614-2682633 | MS.gene21927:intron | 45.0% |
| !! | GATTTGCTATTCGAGCGCAA+AGG | + | chr5.1:2681893-2681912 | None:intergenic | 45.0% |
| !! | GCTTTGGTTCTGGGAATTCA+AGG | + | chr5.1:2684213-2684232 | None:intergenic | 45.0% |
| !! | TGTTGTAGGTGGAGAGCATT+TGG | - | chr5.1:2685207-2685226 | MS.gene21927:CDS | 45.0% |
| !! | TTTGCTATTCGAGCGCAAAG+GGG | + | chr5.1:2681891-2681910 | None:intergenic | 45.0% |
| !!! | CTGGCAAAGTTTTAGAAGCC+AGG | - | chr5.1:2682015-2682034 | MS.gene21927:intron | 45.0% |
| !!! | GCATTGTCCCTTTTTAGCTG+GGG | - | chr5.1:2682616-2682635 | MS.gene21927:intron | 45.0% |
| !!! | AAGTTAAAAATATTTTTAAA+TGG | - | chr5.1:2682879-2682898 | MS.gene21927:intron | 5.0% |
| AAAGGACTCCTGGTTGTGCT+TGG | - | chr5.1:2682576-2682595 | MS.gene21927:intron | 50.0% | |
| AAGGACTCCTGGTTGTGCTT+GGG | - | chr5.1:2682577-2682596 | MS.gene21927:intron | 50.0% | |
| ACATCAACCCAAGCACAACC+AGG | + | chr5.1:2682587-2682606 | None:intergenic | 50.0% | |
| AGACTTCCTCAGATCGATCC+AGG | + | chr5.1:2681800-2681819 | None:intergenic | 50.0% | |
| CAAAGGGGTTGTCTCATCTG+AGG | - | chr5.1:2682724-2682743 | MS.gene21927:intron | 50.0% | |
| CCACAAGCCTTAAGAACCGA+CGG | + | chr5.1:2681171-2681190 | None:intergenic | 50.0% | |
| CCACAGAGCAGAAATATGCC+AGG | - | chr5.1:2682979-2682998 | MS.gene21927:intron | 50.0% | |
| CGAACAAAGAAGCTGAAGCG+AGG | - | chr5.1:2682528-2682547 | MS.gene21927:intron | 50.0% | |
| CGGCTAGAGATGATGTTTCG+TGG | - | chr5.1:2681343-2681362 | MS.gene21927:intron | 50.0% | |
| GATGAGACAACCCCTTTGCT+AGG | + | chr5.1:2682722-2682741 | None:intergenic | 50.0% | |
| GCAACCATTGTCACGTGATC+CGG | + | chr5.1:2682170-2682189 | None:intergenic | 50.0% | |
| GCAAGCCTACTTCGGCAATA+TGG | - | chr5.1:2682366-2682385 | MS.gene21927:intron | 50.0% | |
| GCAATTGCCCTTGTGCTACA+AGG | + | chr5.1:2682220-2682239 | None:intergenic | 50.0% | |
| GCATATGCAAAGCAGGGTCA+TGG | - | chr5.1:2683735-2683754 | MS.gene21927:CDS | 50.0% | |
| GCTGGTTATGTACCAAGCGA+AGG | - | chr5.1:2682794-2682813 | MS.gene21927:intron | 50.0% | |
| GTAGCCCATATTGCCGAAGT+AGG | + | chr5.1:2682374-2682393 | None:intergenic | 50.0% | |
| GTGAGCAAACCCAGAAAGCA+TGG | + | chr5.1:2681778-2681797 | None:intergenic | 50.0% | |
| TCAGGTGTGAAAAGGACTCC+TGG | - | chr5.1:2682566-2682585 | MS.gene21927:intron | 50.0% | |
| TGCATGTTCGCACATTGGAG+CGG | - | chr5.1:2681587-2681606 | MS.gene21927:intron | 50.0% | |
| TTTGGATGTATGCGAGAGGC+AGG | - | chr5.1:2681423-2681442 | MS.gene21927:intron | 50.0% | |
| ! | CCTGGCATATTTCTGCTCTG+TGG | + | chr5.1:2682982-2683001 | None:intergenic | 50.0% |
| ! | GAGGTGTCCCCAGCTAAAAA+GGG | + | chr5.1:2682626-2682645 | None:intergenic | 50.0% |
| ! | GTCGGTTCTTAAGGCTTGTG+GGG | - | chr5.1:2681170-2681189 | MS.gene21927:intron | 50.0% |
| ! | GTGCAAGTTGAGAGCAACAG+AGG | - | chr5.1:2683768-2683787 | MS.gene21927:CDS | 50.0% |
| ! | GTTGATCTCTTTGGAAGGGC+TGG | - | chr5.1:2682302-2682321 | MS.gene21927:intron | 50.0% |
| !! | CATTCTGGCCTTGTAGCACA+AGG | - | chr5.1:2682209-2682228 | MS.gene21927:intron | 50.0% |
| !! | CGTCGGTTCTTAAGGCTTGT+GGG | - | chr5.1:2681169-2681188 | MS.gene21927:intron | 50.0% |
| !! | GCTTTGGGTGTTTGGGTTGT+TGG | - | chr5.1:2684261-2684280 | MS.gene21927:CDS | 50.0% |
| !! | GGTTGTGCTTGGGTTGATGT+TGG | - | chr5.1:2682587-2682606 | MS.gene21927:intron | 50.0% |
| !! | TGCGAGAGGCAGGTATTGAA+AGG | - | chr5.1:2681433-2681452 | MS.gene21927:intron | 50.0% |
| !! | TGCTTGGGTTGATGTTGGCA+GGG | - | chr5.1:2682592-2682611 | MS.gene21927:intron | 50.0% |
| AAGGGGAAGGACGCTTGCAA+TGG | + | chr5.1:2681874-2681893 | None:intergenic | 55.0% | |
| AATCTCGCCTGAACGAGGGT+TGG | + | chr5.1:2682648-2682667 | None:intergenic | 55.0% | |
| ATGCAAGCACCCTCCAGCAA+TGG | + | chr5.1:2681478-2681497 | None:intergenic | 55.0% | |
| CCTGCCCCGTCACTTATTTC+AGG | - | chr5.1:2683342-2683361 | MS.gene21927:CDS | 55.0% | |
| CGAAGGGGTTGTCTCATCTG+AGG | - | chr5.1:2682811-2682830 | MS.gene21927:intron | 55.0% | |
| CTATTCGAGCGCAAAGGGGA+AGG | + | chr5.1:2681887-2681906 | None:intergenic | 55.0% | |
| GATGAGACAACCCCTTCGCT+TGG | + | chr5.1:2682809-2682828 | None:intergenic | 55.0% | |
| GGATATGGTGTGAGTGGGGA+TGG | - | chr5.1:2682095-2682114 | MS.gene21927:intron | 55.0% | |
| GGGAAATCTCGCCTGAACGA+GGG | + | chr5.1:2682652-2682671 | None:intergenic | 55.0% | |
| GTATGGGGCAAGAAGGAAGG+AGG | + | chr5.1:2684674-2684693 | None:intergenic | 55.0% | |
| TGCAAGGCGCAAAACACTCG+CGG | + | chr5.1:2684333-2684352 | None:intergenic | 55.0% | |
| TGCTCACCTGGATCGATCTG+AGG | - | chr5.1:2681791-2681810 | MS.gene21927:intron | 55.0% | |
| ! | ATGGGCTGCAGGAAAGTTGC+TGG | - | chr5.1:2682439-2682458 | MS.gene21927:intron | 55.0% |
| ! | CCTGAAATAAGTGACGGGGC+AGG | + | chr5.1:2683345-2683364 | None:intergenic | 55.0% |
| ! | GCTCTGTGGGTTGTGCATGT+GGG | + | chr5.1:2682968-2682987 | None:intergenic | 55.0% |
| ! | GCTTTCTGGGTTTGCTCACC+TGG | - | chr5.1:2681779-2681798 | MS.gene21927:intron | 55.0% |
| ! | TGCTCTGTGGGTTGTGCATG+TGG | + | chr5.1:2682969-2682988 | None:intergenic | 55.0% |
| !! | CCGTCGGTTCTTAAGGCTTG+TGG | - | chr5.1:2681168-2681187 | MS.gene21927:intron | 55.0% |
| !! | GGAGGTGTCCCCAGCTAAAA+AGG | + | chr5.1:2682627-2682646 | None:intergenic | 55.0% |
| !! | GTGCTTGGGTTGATGTTGGC+AGG | - | chr5.1:2682591-2682610 | MS.gene21927:intron | 55.0% |
| !! | TGCTGGAGGGTGCTTGCATA+CGG | - | chr5.1:2681479-2681498 | MS.gene21927:intron | 55.0% |
| GACACCTCCAACCCTCGTTC+AGG | - | chr5.1:2682638-2682657 | MS.gene21927:intron | 60.0% | |
| GGGGAAATCTCGCCTGAACG+AGG | + | chr5.1:2682653-2682672 | None:intergenic | 60.0% | |
| !! | GCTGGAGGGTGCTTGCATAC+GGG | - | chr5.1:2681480-2681499 | MS.gene21927:intron | 60.0% |
| !! | GTGATTGGGGAATGGGCTGC+AGG | - | chr5.1:2682428-2682447 | MS.gene21927:intron | 60.0% |
| CTCGCCTGAACGAGGGTTGG+AGG | + | chr5.1:2682645-2682664 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2681010 | 2685303 | 2681010 | ID=MS.gene21927 |
| chr5.1 | mRNA | 2681010 | 2685303 | 2681010 | ID=MS.gene21927.t1;Parent=MS.gene21927 |
| chr5.1 | exon | 2683448 | 2685303 | 2683448 | ID=MS.gene21927.t1.exon1;Parent=MS.gene21927.t1 |
| chr5.1 | CDS | 2683448 | 2685303 | 2683448 | ID=cds.MS.gene21927.t1;Parent=MS.gene21927.t1 |
| chr5.1 | exon | 2683284 | 2683383 | 2683284 | ID=MS.gene21927.t1.exon2;Parent=MS.gene21927.t1 |
| chr5.1 | CDS | 2683284 | 2683383 | 2683284 | ID=cds.MS.gene21927.t1;Parent=MS.gene21927.t1 |
| chr5.1 | exon | 2681010 | 2681098 | 2681010 | ID=MS.gene21927.t1.exon3;Parent=MS.gene21927.t1 |
| chr5.1 | CDS | 2681010 | 2681098 | 2681010 | ID=cds.MS.gene21927.t1;Parent=MS.gene21927.t1 |
| Gene Sequence |
| Protein sequence |
