Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33632.t1 | XP_013466449.1 | 93.3 | 936 | 56 | 3 | 6 | 937 | 77 | 1009 | 0.00E+00 | 1716.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33632.t1 | Q9C5W3 | 62.9 | 931 | 304 | 7 | 18 | 937 | 85 | 985 | 0.0e+00 | 1137.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33632.t1 | A0A072VFW9 | 93.3 | 936 | 56 | 3 | 6 | 937 | 77 | 1009 | 0.0e+00 | 1716.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene33632 | 0.807238 | 5.57E-50 | -1.69E-46 |
MS.gene049222 | MS.gene33632 | 0.878319 | 3.09E-69 | -1.69E-46 |
MS.gene049232 | MS.gene33632 | 0.860906 | 1.49E-63 | -1.69E-46 |
MS.gene049285 | MS.gene33632 | 0.810616 | 1.06E-50 | -1.69E-46 |
MS.gene049320 | MS.gene33632 | 0.832019 | 1.20E-55 | -1.69E-46 |
MS.gene049396 | MS.gene33632 | 0.810588 | 1.07E-50 | -1.69E-46 |
MS.gene049609 | MS.gene33632 | 0.842381 | 2.68E-58 | -1.69E-46 |
MS.gene049615 | MS.gene33632 | 0.804052 | 2.60E-49 | -1.69E-46 |
MS.gene049633 | MS.gene33632 | 0.814558 | 1.45E-51 | -1.69E-46 |
MS.gene049805 | MS.gene33632 | 0.814414 | 1.56E-51 | -1.69E-46 |
MS.gene05010 | MS.gene33632 | 0.812286 | 4.58E-51 | -1.69E-46 |
MS.gene050170 | MS.gene33632 | 0.848588 | 5.57E-60 | -1.69E-46 |
MS.gene050323 | MS.gene33632 | 0.833607 | 4.84E-56 | -1.69E-46 |
MS.gene050496 | MS.gene33632 | 0.830493 | 2.85E-55 | -1.69E-46 |
MS.gene050502 | MS.gene33632 | 0.874715 | 5.44E-68 | -1.69E-46 |
MS.gene050504 | MS.gene33632 | 0.838895 | 2.19E-57 | -1.69E-46 |
MS.gene050518 | MS.gene33632 | 0.821743 | 3.43E-53 | -1.69E-46 |
MS.gene050538 | MS.gene33632 | 0.848781 | 4.92E-60 | -1.69E-46 |
MS.gene050577 | MS.gene33632 | 0.861891 | 7.46E-64 | -1.69E-46 |
MS.gene050593 | MS.gene33632 | 0.8296 | 4.70E-55 | -1.69E-46 |
MS.gene050612 | MS.gene33632 | 0.822523 | 2.26E-53 | -1.69E-46 |
MS.gene050675 | MS.gene33632 | 0.831419 | 1.69E-55 | -1.69E-46 |
MS.gene050699 | MS.gene33632 | 0.817835 | 2.68E-52 | -1.69E-46 |
MS.gene050747 | MS.gene33632 | 0.889074 | 3.35E-73 | -1.69E-46 |
MS.gene050772 | MS.gene33632 | 0.837421 | 5.25E-57 | -1.69E-46 |
MS.gene05080 | MS.gene33632 | 0.841469 | 4.66E-58 | -1.69E-46 |
MS.gene050868 | MS.gene33632 | 0.845305 | 4.41E-59 | -1.69E-46 |
MS.gene050871 | MS.gene33632 | 0.84725 | 1.30E-59 | -1.69E-46 |
MS.gene050904 | MS.gene33632 | 0.807046 | 6.12E-50 | -1.69E-46 |
MS.gene050950 | MS.gene33632 | 0.888371 | 6.26E-73 | -1.69E-46 |
MS.gene050986 | MS.gene33632 | 0.834174 | 3.49E-56 | -1.69E-46 |
MS.gene051268 | MS.gene33632 | 0.806009 | 1.01E-49 | -1.69E-46 |
MS.gene051317 | MS.gene33632 | 0.804215 | 2.40E-49 | -1.69E-46 |
MS.gene051387 | MS.gene33632 | 0.818461 | 1.94E-52 | -1.69E-46 |
MS.gene051509 | MS.gene33632 | 0.82266 | 2.10E-53 | -1.69E-46 |
MS.gene051551 | MS.gene33632 | 0.809306 | 2.02E-50 | -1.69E-46 |
MS.gene051666 | MS.gene33632 | 0.82214 | 2.78E-53 | -1.69E-46 |
MS.gene051734 | MS.gene33632 | 0.80164 | 8.19E-49 | -1.69E-46 |
MS.gene051838 | MS.gene33632 | 0.847605 | 1.04E-59 | -1.69E-46 |
MS.gene051941 | MS.gene33632 | 0.8259 | 3.64E-54 | -1.69E-46 |
MS.gene052164 | MS.gene33632 | 0.877784 | 4.76E-69 | -1.69E-46 |
MS.gene052346 | MS.gene33632 | 0.813582 | 2.38E-51 | -1.69E-46 |
MS.gene052414 | MS.gene33632 | 0.836123 | 1.13E-56 | -1.69E-46 |
MS.gene052482 | MS.gene33632 | 0.83751 | 4.98E-57 | -1.69E-46 |
MS.gene052486 | MS.gene33632 | 0.835467 | 1.65E-56 | -1.69E-46 |
MS.gene052501 | MS.gene33632 | 0.846943 | 1.58E-59 | -1.69E-46 |
MS.gene052503 | MS.gene33632 | 0.874433 | 6.78E-68 | -1.69E-46 |
MS.gene052505 | MS.gene33632 | 0.840786 | 7.05E-58 | -1.69E-46 |
MS.gene052506 | MS.gene33632 | 0.807564 | 4.75E-50 | -1.69E-46 |
MS.gene052606 | MS.gene33632 | -0.804205 | 2.42E-49 | -1.69E-46 |
MS.gene052615 | MS.gene33632 | 0.814932 | 1.20E-51 | -1.69E-46 |
MS.gene052822 | MS.gene33632 | 0.801197 | 1.01E-48 | -1.69E-46 |
MS.gene052823 | MS.gene33632 | 0.875466 | 3.01E-68 | -1.69E-46 |
MS.gene052825 | MS.gene33632 | 0.869536 | 2.88E-66 | -1.69E-46 |
MS.gene052966 | MS.gene33632 | 0.839422 | 1.60E-57 | -1.69E-46 |
MS.gene052982 | MS.gene33632 | 0.80935 | 1.98E-50 | -1.69E-46 |
MS.gene053203 | MS.gene33632 | 0.865454 | 5.84E-65 | -1.69E-46 |
MS.gene053207 | MS.gene33632 | 0.825165 | 5.44E-54 | -1.69E-46 |
MS.gene053213 | MS.gene33632 | 0.850603 | 1.53E-60 | -1.69E-46 |
MS.gene053286 | MS.gene33632 | 0.851944 | 6.38E-61 | -1.69E-46 |
MS.gene053436 | MS.gene33632 | 0.899985 | 1.15E-77 | -1.69E-46 |
MS.gene053479 | MS.gene33632 | 0.811643 | 6.32E-51 | -1.69E-46 |
MS.gene053574 | MS.gene33632 | 0.884752 | 1.47E-71 | -1.69E-46 |
MS.gene053579 | MS.gene33632 | 0.812282 | 4.59E-51 | -1.69E-46 |
MS.gene053626 | MS.gene33632 | 0.850272 | 1.89E-60 | -1.69E-46 |
MS.gene053632 | MS.gene33632 | 0.80833 | 3.27E-50 | -1.69E-46 |
MS.gene053824 | MS.gene33632 | 0.806848 | 6.74E-50 | -1.69E-46 |
MS.gene053912 | MS.gene33632 | 0.802885 | 4.54E-49 | -1.69E-46 |
MS.gene054408 | MS.gene33632 | 0.826878 | 2.13E-54 | -1.69E-46 |
MS.gene054595 | MS.gene33632 | 0.861209 | 1.20E-63 | -1.69E-46 |
MS.gene054600 | MS.gene33632 | 0.823816 | 1.13E-53 | -1.69E-46 |
MS.gene054642 | MS.gene33632 | 0.81178 | 5.90E-51 | -1.69E-46 |
MS.gene054706 | MS.gene33632 | -0.838666 | 2.51E-57 | -1.69E-46 |
MS.gene05470 | MS.gene33632 | 0.844891 | 5.71E-59 | -1.69E-46 |
MS.gene054742 | MS.gene33632 | -0.804566 | 2.03E-49 | -1.69E-46 |
MS.gene054927 | MS.gene33632 | 0.838227 | 3.26E-57 | -1.69E-46 |
MS.gene054954 | MS.gene33632 | 0.820441 | 6.85E-53 | -1.69E-46 |
MS.gene055289 | MS.gene33632 | 0.809316 | 2.01E-50 | -1.69E-46 |
MS.gene055362 | MS.gene33632 | 0.822303 | 2.55E-53 | -1.69E-46 |
MS.gene055502 | MS.gene33632 | 0.839777 | 1.29E-57 | -1.69E-46 |
MS.gene055577 | MS.gene33632 | 0.857679 | 1.39E-62 | -1.69E-46 |
MS.gene055629 | MS.gene33632 | 0.857836 | 1.24E-62 | -1.69E-46 |
MS.gene055741 | MS.gene33632 | 0.833613 | 4.82E-56 | -1.69E-46 |
MS.gene055744 | MS.gene33632 | 0.826932 | 2.07E-54 | -1.69E-46 |
MS.gene055748 | MS.gene33632 | 0.837382 | 5.37E-57 | -1.69E-46 |
MS.gene055750 | MS.gene33632 | 0.840312 | 9.38E-58 | -1.69E-46 |
MS.gene055751 | MS.gene33632 | 0.82849 | 8.73E-55 | -1.69E-46 |
MS.gene05589 | MS.gene33632 | 0.863757 | 1.98E-64 | -1.69E-46 |
MS.gene055909 | MS.gene33632 | 0.808149 | 3.57E-50 | -1.69E-46 |
MS.gene055911 | MS.gene33632 | 0.80781 | 4.21E-50 | -1.69E-46 |
MS.gene055941 | MS.gene33632 | 0.817736 | 2.82E-52 | -1.69E-46 |
MS.gene056040 | MS.gene33632 | 0.872739 | 2.52E-67 | -1.69E-46 |
MS.gene056166 | MS.gene33632 | 0.86908 | 4.05E-66 | -1.69E-46 |
MS.gene056387 | MS.gene33632 | 0.821045 | 4.97E-53 | -1.69E-46 |
MS.gene056446 | MS.gene33632 | 0.84457 | 6.97E-59 | -1.69E-46 |
MS.gene056487 | MS.gene33632 | 0.802954 | 4.39E-49 | -1.69E-46 |
MS.gene056504 | MS.gene33632 | 0.868919 | 4.57E-66 | -1.69E-46 |
MS.gene056510 | MS.gene33632 | 0.831005 | 2.13E-55 | -1.69E-46 |
MS.gene056514 | MS.gene33632 | 0.802361 | 5.82E-49 | -1.69E-46 |
MS.gene05664 | MS.gene33632 | 0.832637 | 8.44E-56 | -1.69E-46 |
MS.gene056657 | MS.gene33632 | 0.836305 | 1.01E-56 | -1.69E-46 |
MS.gene05666 | MS.gene33632 | 0.847402 | 1.18E-59 | -1.69E-46 |
MS.gene056692 | MS.gene33632 | 0.800695 | 1.28E-48 | -1.69E-46 |
MS.gene056877 | MS.gene33632 | 0.802771 | 4.79E-49 | -1.69E-46 |
MS.gene057019 | MS.gene33632 | 0.81362 | 2.33E-51 | -1.69E-46 |
MS.gene057076 | MS.gene33632 | 0.811029 | 8.59E-51 | -1.69E-46 |
MS.gene057086 | MS.gene33632 | 0.848375 | 6.38E-60 | -1.69E-46 |
MS.gene057331 | MS.gene33632 | 0.807912 | 4.01E-50 | -1.69E-46 |
MS.gene057416 | MS.gene33632 | 0.817971 | 2.50E-52 | -1.69E-46 |
MS.gene057658 | MS.gene33632 | 0.830253 | 3.26E-55 | -1.69E-46 |
MS.gene057734 | MS.gene33632 | 0.850076 | 2.14E-60 | -1.69E-46 |
MS.gene057831 | MS.gene33632 | 0.829387 | 5.30E-55 | -1.69E-46 |
MS.gene05787 | MS.gene33632 | 0.869376 | 3.24E-66 | -1.69E-46 |
MS.gene058019 | MS.gene33632 | 0.825761 | 3.93E-54 | -1.69E-46 |
MS.gene058130 | MS.gene33632 | 0.812238 | 4.69E-51 | -1.69E-46 |
MS.gene058157 | MS.gene33632 | 0.802707 | 4.94E-49 | -1.69E-46 |
MS.gene058334 | MS.gene33632 | -0.823253 | 1.53E-53 | -1.69E-46 |
MS.gene05837 | MS.gene33632 | 0.842213 | 2.97E-58 | -1.69E-46 |
MS.gene058419 | MS.gene33632 | 0.821334 | 4.27E-53 | -1.69E-46 |
MS.gene058544 | MS.gene33632 | 0.852643 | 4.03E-61 | -1.69E-46 |
MS.gene058838 | MS.gene33632 | 0.846304 | 2.36E-59 | -1.69E-46 |
MS.gene05883 | MS.gene33632 | 0.80567 | 1.19E-49 | -1.69E-46 |
MS.gene058948 | MS.gene33632 | 0.815439 | 9.24E-52 | -1.69E-46 |
MS.gene059022 | MS.gene33632 | 0.802299 | 5.99E-49 | -1.69E-46 |
MS.gene059023 | MS.gene33632 | 0.822048 | 2.92E-53 | -1.69E-46 |
MS.gene05913 | MS.gene33632 | 0.810138 | 1.34E-50 | -1.69E-46 |
MS.gene05934 | MS.gene33632 | 0.814886 | 1.23E-51 | -1.69E-46 |
MS.gene059367 | MS.gene33632 | 0.864564 | 1.11E-64 | -1.69E-46 |
MS.gene059368 | MS.gene33632 | 0.81024 | 1.27E-50 | -1.69E-46 |
MS.gene059667 | MS.gene33632 | 0.876627 | 1.20E-68 | -1.69E-46 |
MS.gene059677 | MS.gene33632 | 0.804571 | 2.03E-49 | -1.69E-46 |
MS.gene059718 | MS.gene33632 | 0.836548 | 8.77E-57 | -1.69E-46 |
MS.gene059865 | MS.gene33632 | 0.858698 | 6.89E-63 | -1.69E-46 |
MS.gene06000 | MS.gene33632 | 0.858606 | 7.34E-63 | -1.69E-46 |
MS.gene060087 | MS.gene33632 | -0.813995 | 1.93E-51 | -1.69E-46 |
MS.gene060372 | MS.gene33632 | 0.829566 | 4.79E-55 | -1.69E-46 |
MS.gene060482 | MS.gene33632 | 0.830669 | 2.58E-55 | -1.69E-46 |
MS.gene060762 | MS.gene33632 | 0.837436 | 5.20E-57 | -1.69E-46 |
MS.gene060778 | MS.gene33632 | 0.852176 | 5.48E-61 | -1.69E-46 |
MS.gene06077 | MS.gene33632 | 0.848115 | 7.53E-60 | -1.69E-46 |
MS.gene060835 | MS.gene33632 | 0.863804 | 1.92E-64 | -1.69E-46 |
MS.gene06092 | MS.gene33632 | 0.827092 | 1.89E-54 | -1.69E-46 |
MS.gene06097 | MS.gene33632 | 0.856629 | 2.83E-62 | -1.69E-46 |
MS.gene060982 | MS.gene33632 | 0.869769 | 2.42E-66 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33632.t1 | MTR_1g029620 | 94.872 | 936 | 41 | 3 | 6 | 937 | 77 | 1009 | 0.0 | 1811 |
MS.gene33632.t1 | MTR_1g029620 | 94.368 | 870 | 42 | 3 | 6 | 871 | 77 | 943 | 0.0 | 1667 |
MS.gene33632.t1 | MTR_3g088575 | 69.868 | 906 | 233 | 8 | 51 | 937 | 1 | 885 | 0.0 | 1260 |
MS.gene33632.t1 | MTR_3g088575 | 66.979 | 854 | 242 | 8 | 15 | 849 | 60 | 892 | 0.0 | 1116 |
MS.gene33632.t1 | MTR_4g076990 | 45.260 | 327 | 166 | 6 | 617 | 936 | 197 | 517 | 4.53e-82 | 275 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33632.t1 | AT1G21640 | 63.480 | 931 | 299 | 8 | 18 | 937 | 85 | 985 | 0.0 | 1175 |
MS.gene33632.t1 | AT1G21640 | 62.540 | 945 | 299 | 9 | 18 | 937 | 85 | 999 | 0.0 | 1166 |
MS.gene33632.t1 | AT3G21070 | 45.566 | 327 | 165 | 6 | 617 | 936 | 201 | 521 | 1.10e-83 | 279 |
MS.gene33632.t1 | AT3G21070 | 45.345 | 333 | 163 | 7 | 617 | 936 | 150 | 476 | 1.52e-83 | 278 |
MS.gene33632.t1 | AT3G21070 | 45.566 | 327 | 165 | 6 | 617 | 936 | 279 | 599 | 1.35e-82 | 279 |
MS.gene33632.t1 | AT3G21070 | 40.000 | 120 | 69 | 3 | 617 | 733 | 279 | 398 | 7.90e-18 | 87.4 |
Find 213 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAGGAGAAATTCCATTTA+AGG | 0.117499 | 1.1:+15229817 | None:intergenic |
GATAAAATAGTTTCTGTTCT+TGG | 0.162840 | 1.1:-15230757 | MS.gene33632:CDS |
GAAATTCTTACCGCAATTTA+AGG | 0.173847 | 1.1:-15229639 | MS.gene33632:CDS |
GCTTGATTCGCTGCCTAAAT+TGG | 0.187801 | 1.1:-15225855 | MS.gene33632:CDS |
TTCTGCTCGATTAGAATTAA+AGG | 0.198861 | 1.1:-15226251 | MS.gene33632:intron |
AAGGCTTCATTCTGCATTAA+TGG | 0.226394 | 1.1:-15230857 | MS.gene33632:CDS |
CAAGGTAATGCAGCCTTAAA+TGG | 0.229895 | 1.1:-15229830 | MS.gene33632:CDS |
GTGGGTCCTGATAGTTTAAA+TGG | 0.235665 | 1.1:-15229563 | MS.gene33632:CDS |
TGACACTCACTTTGGTTATA+AGG | 0.245401 | 1.1:+15227590 | None:intergenic |
GGAAAAGATCCTTCCTTATC+AGG | 0.258160 | 1.1:+15229800 | None:intergenic |
GTCCTACACTATTTGCTAAT+TGG | 0.269632 | 1.1:-15230450 | MS.gene33632:CDS |
TTTAACAACAGCACATTCTT+TGG | 0.278780 | 1.1:+15229104 | None:intergenic |
CTTGCCAGAATTCCAGGTTT+TGG | 0.283366 | 1.1:-15228713 | MS.gene33632:CDS |
GTCGTGGAGGGGACCAGTTC+CGG | 0.285693 | 1.1:-15230929 | MS.gene33632:intron |
AGAATGTGATAACATGTTAA+AGG | 0.290501 | 1.1:+15230012 | None:intergenic |
GCGTTACTTCTAGCATCTTC+TGG | 0.291203 | 1.1:+15226003 | None:intergenic |
AAAGGTCACGGAATCTTCTT+TGG | 0.291776 | 1.1:-15229177 | MS.gene33632:CDS |
AGGCATATTGTAGGATCTTT+AGG | 0.296902 | 1.1:-15230888 | MS.gene33632:CDS |
AACAATATGCACGGAACGTT+TGG | 0.298253 | 1.1:+15226325 | None:intergenic |
AAATCTCCAAGGGTTGAAAA+TGG | 0.312801 | 1.1:-15229353 | MS.gene33632:CDS |
GAATCCAAAACCTGGAATTC+TGG | 0.318930 | 1.1:+15228709 | None:intergenic |
AAGAATGTCTGCTATGATTC+TGG | 0.319807 | 1.1:-15230499 | MS.gene33632:CDS |
ATTGTCATCGACCGTAATTT+CGG | 0.320404 | 1.1:+15229508 | None:intergenic |
CAAGCCTCTCATTCCAATTT+AGG | 0.327020 | 1.1:+15225842 | None:intergenic |
AATTCTAATCGAGCAGAATC+TGG | 0.332072 | 1.1:+15226256 | None:intergenic |
CAATTTAAGGACATGGCTAT+TGG | 0.337248 | 1.1:-15229626 | MS.gene33632:CDS |
GGCAGGGACGATGTTCTTAC+TGG | 0.338007 | 1.1:-15230709 | MS.gene33632:CDS |
TTGTCATCGACCGTAATTTC+GGG | 0.343242 | 1.1:+15229509 | None:intergenic |
GCTGATCCATTTAAACTATC+AGG | 0.343657 | 1.1:+15229557 | None:intergenic |
GATGTACTTGCCAGAATTCC+AGG | 0.343709 | 1.1:-15228719 | MS.gene33632:CDS |
TTCATAGCAAGGAAGGAGTT+TGG | 0.361927 | 1.1:-15230117 | MS.gene33632:CDS |
CACCTTCGGGCTTGACTCTC+CGG | 0.365207 | 1.1:-15232910 | MS.gene33632:intron |
ATCTGGAGAGCCCGAAATTA+CGG | 0.366087 | 1.1:-15229519 | MS.gene33632:CDS |
CAATGAGGTGGTTGTTGATC+GGG | 0.368521 | 1.1:-15227659 | MS.gene33632:CDS |
CCAAGGTTAAATGATACAAT+AGG | 0.370413 | 1.1:+15228478 | None:intergenic |
ATTTGATAATTGACATAATC+GGG | 0.377033 | 1.1:+15229671 | None:intergenic |
GGTGCAGTCATAACTTCAAC+TGG | 0.379017 | 1.1:+15230205 | None:intergenic |
AAAGCTTGGGGACGAACTAT+TGG | 0.380081 | 1.1:-15229081 | MS.gene33632:CDS |
TCGTGGAGGGGACCAGTTCC+GGG | 0.380564 | 1.1:-15230928 | MS.gene33632:intron |
CTCGCAACCTGTTCCATTGT+TGG | 0.385256 | 1.1:+15230184 | None:intergenic |
CGTAAAGGTAAAGCAATTCC+AGG | 0.385617 | 1.1:-15227700 | MS.gene33632:CDS |
GACAGTGAATGTGGACAGAT+AGG | 0.388238 | 1.1:+15226298 | None:intergenic |
GATTTGATAATTGACATAAT+CGG | 0.389848 | 1.1:+15229670 | None:intergenic |
AAATGGAATTTCTCCTGATA+AGG | 0.390422 | 1.1:-15229813 | MS.gene33632:CDS |
CAAGGTTAAATGATACAATA+GGG | 0.391337 | 1.1:+15228479 | None:intergenic |
GAATGTGATAACATGTTAAA+GGG | 0.391666 | 1.1:+15230013 | None:intergenic |
TCATTTAACCTTGGTTCCCT+TGG | 0.392134 | 1.1:-15228469 | MS.gene33632:CDS |
CATTCAATCTTTGAAAGGTA+TGG | 0.404554 | 1.1:+15227628 | None:intergenic |
GACTTAAGACAAGTCATTCA+TGG | 0.406463 | 1.1:-15227784 | MS.gene33632:CDS |
ATGTCAATTATCAAATCAAA+AGG | 0.408195 | 1.1:-15229664 | MS.gene33632:CDS |
GCATTATGCAATCCGTTGAC+TGG | 0.408333 | 1.1:-15230832 | MS.gene33632:CDS |
GACAATCAAAAGTCTGTGAA+TGG | 0.413979 | 1.1:-15229491 | MS.gene33632:CDS |
CGTCGTCAACGGGAGTTGTA+AGG | 0.414483 | 1.1:-15229265 | MS.gene33632:CDS |
CCTTGTATCATGGCTATAGA+AGG | 0.419763 | 1.1:+15228679 | None:intergenic |
CTAACGTGGTTACTAGATAA+AGG | 0.422106 | 1.1:-15230334 | MS.gene33632:CDS |
GTTTCCAATGGTACTATTGT+GGG | 0.424786 | 1.1:-15229581 | MS.gene33632:CDS |
CGCAGAGATTAGCGAGATTG+AGG | 0.428348 | 1.1:-15230656 | MS.gene33632:CDS |
TTTCATCTCGCTTCTGAAAA+CGG | 0.431248 | 1.1:+15230615 | None:intergenic |
CATCTGCTATGGTGTCTAGA+TGG | 0.435337 | 1.1:-15230090 | MS.gene33632:CDS |
GAATGAGAGGCTTGATCAAA+AGG | 0.438725 | 1.1:-15225833 | MS.gene33632:CDS |
ACTGCATATTCCACGGCTGC+TGG | 0.443446 | 1.1:-15227379 | MS.gene33632:CDS |
CTAATCTCTGCGTCAAGAAA+GGG | 0.444051 | 1.1:+15230667 | None:intergenic |
GATGCTCACTCATATGTATT+CGG | 0.447651 | 1.1:+15225926 | None:intergenic |
AGTTTGACCAAACGGGTGAT+TGG | 0.449747 | 1.1:-15225885 | MS.gene33632:CDS |
GACTGCACCAACAATGGAAC+AGG | 0.453609 | 1.1:-15230191 | MS.gene33632:CDS |
TAATGCAGAATGAAGCCTTT+CGG | 0.457413 | 1.1:+15230861 | None:intergenic |
GATATGTGTGCGTCGTCAAC+GGG | 0.459074 | 1.1:-15229275 | MS.gene33632:CDS |
TGTTAACAAGTTTGACCAAA+CGG | 0.464106 | 1.1:-15225893 | MS.gene33632:CDS |
GTTAACAAGTTTGACCAAAC+GGG | 0.467271 | 1.1:-15225892 | MS.gene33632:CDS |
TCTAGTAGGACAACAGTAAA+CGG | 0.468135 | 1.1:-15229455 | MS.gene33632:CDS |
GCTCATGTTGATCATCCATC+TGG | 0.468145 | 1.1:-15229536 | MS.gene33632:CDS |
GTGAACGATGCTATTTCATC+TGG | 0.471293 | 1.1:-15230250 | MS.gene33632:CDS |
TGCGGAACCAATCACCCGTT+TGG | 0.471537 | 1.1:+15225878 | None:intergenic |
GCTAATCTCTGCGTCAAGAA+AGG | 0.471633 | 1.1:+15230666 | None:intergenic |
TCAATGAGGTGGTTGTTGAT+CGG | 0.473844 | 1.1:-15227660 | MS.gene33632:CDS |
ATTAGCAAATAGTGTAGGAC+AGG | 0.475860 | 1.1:+15230453 | None:intergenic |
AGGATGTCAAATACTTTCCC+TGG | 0.476122 | 1.1:+15227682 | None:intergenic |
GCTTTACGCGATGAAGAGTT+GGG | 0.476938 | 1.1:-15229311 | MS.gene33632:CDS |
AGCTTTACGCGATGAAGAGT+TGG | 0.477808 | 1.1:-15229312 | MS.gene33632:CDS |
TGTTTCCAATGGTACTATTG+TGG | 0.479120 | 1.1:-15229582 | MS.gene33632:CDS |
TTTAAGCTCCGATCATCATC+AGG | 0.480457 | 1.1:+15230547 | None:intergenic |
ACGCACACATATCGCCTTCA+AGG | 0.482866 | 1.1:+15229285 | None:intergenic |
ATGATCGGAGCTTAAATGTA+TGG | 0.483058 | 1.1:-15230540 | MS.gene33632:CDS |
TCCTTGCTATGAAGATAGAT+AGG | 0.483132 | 1.1:+15230127 | None:intergenic |
CCTATTGTATCATTTAACCT+TGG | 0.485490 | 1.1:-15228478 | MS.gene33632:CDS |
GCAAGTACATCATGCACATC+AGG | 0.487460 | 1.1:+15228731 | None:intergenic |
ATGGTGTCTACATTACTCTT+AGG | 0.489278 | 1.1:-15227747 | MS.gene33632:CDS |
CATAGCATTCAATCTTTGAA+AGG | 0.491325 | 1.1:+15227623 | None:intergenic |
AAAAGCTCAAGTTCCTCCTC+CGG | 0.491521 | 1.1:-15229750 | MS.gene33632:CDS |
GAAAATGGAACAGTCAAGGC+TGG | 0.498620 | 1.1:-15229338 | MS.gene33632:CDS |
AGTTTCTGTTCTTGGATGCA+TGG | 0.501044 | 1.1:-15230749 | MS.gene33632:CDS |
CTTACCGCAATTTAAGGACA+TGG | 0.501593 | 1.1:-15229633 | MS.gene33632:CDS |
CAAGGTGATGGAGTCATTGT+TGG | 0.503053 | 1.1:-15227418 | MS.gene33632:CDS |
CTGAAGTCGAGGCATATTGT+AGG | 0.503127 | 1.1:-15230897 | MS.gene33632:CDS |
CTCAGCAACAGATGCTTATG+TGG | 0.506563 | 1.1:-15229136 | MS.gene33632:CDS |
GATGCAACACGCAGTTCTGT+TGG | 0.508978 | 1.1:-15229899 | MS.gene33632:CDS |
ACAATCAAAAGTCTGTGAAT+GGG | 0.511700 | 1.1:-15229490 | MS.gene33632:CDS |
CATTATGCAATCCGTTGACT+GGG | 0.511984 | 1.1:-15230831 | MS.gene33632:CDS |
GTCATTGTTGGCACTCCTAC+GGG | 0.512434 | 1.1:-15227406 | MS.gene33632:CDS |
TCAGCAATATCACCCGGAAC+TGG | 0.514753 | 1.1:+15230916 | None:intergenic |
CGTCCCTGCCTTTGTTCACA+AGG | 0.515046 | 1.1:+15230722 | None:intergenic |
GGAATGCTTCTAGTTCTAGT+AGG | 0.516272 | 1.1:-15229469 | MS.gene33632:CDS |
CACGGCTGCTGGAGGTTCCA+TGG | 0.519383 | 1.1:-15227368 | MS.gene33632:intron |
GAAGAGTTGGGATCCCTTGA+AGG | 0.521799 | 1.1:-15229299 | MS.gene33632:CDS |
CAGGCATTAAATAATTCTGA+AGG | 0.522487 | 1.1:+15230566 | None:intergenic |
CGATATGTGTGCGTCGTCAA+CGG | 0.524377 | 1.1:-15229276 | MS.gene33632:CDS |
CGTTTCAGAGACACTTCTGT+CGG | 0.525556 | 1.1:+15229871 | None:intergenic |
AGTCATTGTTGGCACTCCTA+CGG | 0.525764 | 1.1:-15227407 | MS.gene33632:CDS |
TATCCCTTGTGAACAAAGGC+AGG | 0.526158 | 1.1:-15230726 | MS.gene33632:CDS |
GAAATTGTCTCTTACAGTCT+CGG | 0.527981 | 1.1:+15230285 | None:intergenic |
GTAATTTCGGGCTCTCCAGA+TGG | 0.529696 | 1.1:+15229521 | None:intergenic |
AACTCAAGTACCTTGTATCA+TGG | 0.533647 | 1.1:+15228669 | None:intergenic |
AGATGAAATAGCATCGTTCA+CGG | 0.537270 | 1.1:+15230252 | None:intergenic |
AGAAAGATCCTCCCTCGAAA+AGG | 0.537816 | 1.1:-15229948 | MS.gene33632:CDS |
AAATAGCTCTGCAAAACTGC+AGG | 0.538113 | 1.1:-15229987 | MS.gene33632:CDS |
AGGACCCACAATAGTACCAT+TGG | 0.538672 | 1.1:+15229577 | None:intergenic |
ACAGTGAATGTGGACAGATA+GGG | 0.540155 | 1.1:+15226299 | None:intergenic |
GTCTTTCAGGTACAAGGTGA+TGG | 0.540615 | 1.1:-15227430 | MS.gene33632:intron |
TGTCATGTCTTTCAGGTACA+AGG | 0.544304 | 1.1:-15227436 | MS.gene33632:intron |
TGGTCAAACTTGTTAACAGT+TGG | 0.545206 | 1.1:+15225898 | None:intergenic |
TCAAGGGGAATTACATTACA+TGG | 0.545720 | 1.1:-15229426 | MS.gene33632:CDS |
GTATGTAGTTTGACGACTAT+AGG | 0.547777 | 1.1:-15227810 | MS.gene33632:intron |
TCGCTTCTGAAAACGGCAAG+TGG | 0.547859 | 1.1:+15230622 | None:intergenic |
TTCTGAAAACGGCAAGTGGA+GGG | 0.548295 | 1.1:+15230626 | None:intergenic |
GCAGAATCTGGAAGAATGAC+AGG | 0.548305 | 1.1:+15226268 | None:intergenic |
ATGTTACAGATAGCAGCAAA+AGG | 0.548480 | 1.1:-15230150 | MS.gene33632:CDS |
GTCTGCACGAATCCAAAACC+TGG | 0.548544 | 1.1:+15228701 | None:intergenic |
CCTTCTATAGCCATGATACA+AGG | 0.550051 | 1.1:-15228679 | MS.gene33632:intron |
GGAATGTAGCGTCTCGTATG+AGG | 0.551593 | 1.1:-15230809 | MS.gene33632:CDS |
ATTTAATGCCTGATGATGAT+CGG | 0.551924 | 1.1:-15230555 | MS.gene33632:CDS |
GCCTATCTATCTTCATAGCA+AGG | 0.556380 | 1.1:-15230128 | MS.gene33632:CDS |
GGAATTTCTCCTGATAAGGA+AGG | 0.557805 | 1.1:-15229809 | MS.gene33632:CDS |
AAGAAAGGGGTTCATAATTG+AGG | 0.558581 | 1.1:+15230681 | None:intergenic |
AACGCGTGGGTCTCATTCGA+TGG | 0.559011 | 1.1:-15225985 | MS.gene33632:CDS |
TGTCAATTATCAAATCAAAA+GGG | 0.561271 | 1.1:-15229663 | MS.gene33632:CDS |
AGTTATGACTGCACCAACAA+TGG | 0.561997 | 1.1:-15230197 | MS.gene33632:CDS |
ATGTAACAACTAAATCTCCA+AGG | 0.564009 | 1.1:-15229364 | MS.gene33632:CDS |
CATGGAACCTCCAGCAGCCG+TGG | 0.566205 | 1.1:+15227369 | None:intergenic |
TTGGAAAAGATATCCGGAGG+AGG | 0.566248 | 1.1:+15229737 | None:intergenic |
TTCTTCTTCTAAAGAAGACA+CGG | 0.570642 | 1.1:-15230413 | MS.gene33632:CDS |
AGAAGACAACAGCTCTCAAG+AGG | 0.570976 | 1.1:-15225958 | MS.gene33632:CDS |
ATCTATCTTCATAGCAAGGA+AGG | 0.571744 | 1.1:-15230124 | MS.gene33632:CDS |
AAACTTGTTAACAGTTGGAA+GGG | 0.572633 | 1.1:+15225903 | None:intergenic |
CAAACTTGTTAACAGTTGGA+AGG | 0.574187 | 1.1:+15225902 | None:intergenic |
AGCATCTGTTGCTGAGTGCT+AGG | 0.576041 | 1.1:+15229143 | None:intergenic |
ATATGCACGGAACGTTTGGA+TGG | 0.577570 | 1.1:+15226329 | None:intergenic |
AATGAGGTGGTTGTTGATCG+GGG | 0.579010 | 1.1:-15227658 | MS.gene33632:CDS |
GGTGGTCAAGTAACAGAAGA+AGG | 0.582613 | 1.1:-15230358 | MS.gene33632:CDS |
ACGCTACATTCCCCAGTCAA+CGG | 0.582989 | 1.1:+15230820 | None:intergenic |
CATGGAAATACTTCACGAGA+TGG | 0.583237 | 1.1:-15227766 | MS.gene33632:CDS |
AACTTGTTAACAGTTGGAAG+GGG | 0.584585 | 1.1:+15225904 | None:intergenic |
CAGTGAATGTGGACAGATAG+GGG | 0.586339 | 1.1:+15226300 | None:intergenic |
ACAGTAAACGGATCAAGTCA+AGG | 0.588409 | 1.1:-15229443 | MS.gene33632:CDS |
GAAGGTGAATGAAAATGACT+TGG | 0.590526 | 1.1:+15232926 | None:intergenic |
CTTCTGAAAACGGCAAGTGG+AGG | 0.591574 | 1.1:+15230625 | None:intergenic |
AAGGGCAACATGTAAACTCT+CGG | 0.591706 | 1.1:+15230585 | None:intergenic |
GCTGCCTAAATTGGAATGAG+AGG | 0.592323 | 1.1:-15225846 | MS.gene33632:CDS |
CAGTAAACGGATCAAGTCAA+GGG | 0.592433 | 1.1:-15229442 | MS.gene33632:CDS |
GGAGTCTGAAGAATTAGAAA+CGG | 0.593217 | 1.1:-15230392 | MS.gene33632:CDS |
AATGTGATAACATGTTAAAG+GGG | 0.595112 | 1.1:+15230014 | None:intergenic |
GTCGTCAACGGGAGTTGTAA+GGG | 0.596339 | 1.1:-15229264 | MS.gene33632:CDS |
AAGGTTAAATGATACAATAG+GGG | 0.599838 | 1.1:+15228480 | None:intergenic |
GCATATTCCACGGCTGCTGG+AGG | 0.600712 | 1.1:-15227376 | MS.gene33632:CDS |
AAGAGACAATTTCTATCAAG+CGG | 0.601979 | 1.1:-15230275 | MS.gene33632:CDS |
GGAGATGTGGTTGTTTCCAA+TGG | 0.604328 | 1.1:-15229593 | MS.gene33632:CDS |
CAACAATGGAACAGGTTGCG+AGG | 0.605355 | 1.1:-15230183 | MS.gene33632:CDS |
CGCACACATATCGCCTTCAA+GGG | 0.605429 | 1.1:+15229286 | None:intergenic |
GGTCTAAATGACAGTGAATG+TGG | 0.605581 | 1.1:+15226289 | None:intergenic |
AAAATGGAACAGTCAAGGCT+GGG | 0.606655 | 1.1:-15229337 | MS.gene33632:CDS |
AGTTTGGAGATCATCTGCTA+TGG | 0.609973 | 1.1:-15230101 | MS.gene33632:CDS |
GGGACGATGTTCTTACTGGA+AGG | 0.612837 | 1.1:-15230705 | MS.gene33632:CDS |
ATGGCTATTGGAAGACGTGA+AGG | 0.614015 | 1.1:-15229614 | MS.gene33632:CDS |
ATTCACAACGGCAGAGACAT+CGG | 0.614951 | 1.1:+15229397 | None:intergenic |
AGGCATTAAATAATTCTGAA+GGG | 0.616351 | 1.1:+15230567 | None:intergenic |
GTCCCTGCCTTTGTTCACAA+GGG | 0.619714 | 1.1:+15230723 | None:intergenic |
ATTTGACATCCTCAATGAGG+TGG | 0.621324 | 1.1:-15227671 | MS.gene33632:CDS |
GTAAAGGTAAAGCAATTCCA+GGG | 0.621381 | 1.1:-15227699 | MS.gene33632:CDS |
GGTTGAAAATGGAACAGTCA+AGG | 0.621469 | 1.1:-15229342 | MS.gene33632:CDS |
TAATCTCTGCGTCAAGAAAG+GGG | 0.622731 | 1.1:+15230668 | None:intergenic |
GGGAAGTACTGCATATTCCA+CGG | 0.629158 | 1.1:-15227386 | MS.gene33632:CDS |
GATCAACAACCACCTCATTG+AGG | 0.630967 | 1.1:+15227662 | None:intergenic |
ATCCCTTGTGAACAAAGGCA+GGG | 0.631490 | 1.1:-15230725 | MS.gene33632:CDS |
ATGGTATCCCTTGTGAACAA+AGG | 0.632008 | 1.1:-15230730 | MS.gene33632:CDS |
ATGTGATAACATGTTAAAGG+GGG | 0.633639 | 1.1:+15230015 | None:intergenic |
TGTAACAACTAAATCTCCAA+GGG | 0.634129 | 1.1:-15229363 | MS.gene33632:CDS |
GGATCTTTAGGAACTCCGAA+AGG | 0.635393 | 1.1:-15230876 | MS.gene33632:CDS |
TACCGGAGAGTCAAGCCCGA+AGG | 0.636841 | 1.1:+15232908 | None:intergenic |
TCAGAAAACCAAGGGAACCA+AGG | 0.637128 | 1.1:+15228461 | None:intergenic |
GGGTGATATTGCTGAAGTCG+AGG | 0.638757 | 1.1:-15230908 | MS.gene33632:CDS |
CTGCTATGGTGTCTAGATGG+AGG | 0.639306 | 1.1:-15230087 | MS.gene33632:CDS |
ATGAGAAGTCAGAAAACCAA+GGG | 0.643195 | 1.1:+15228453 | None:intergenic |
ATCGGAGCTTAAATGTATGG+AGG | 0.646616 | 1.1:-15230537 | MS.gene33632:CDS |
TTGTACTAGAGAAAAGGTCA+CGG | 0.651293 | 1.1:-15229189 | MS.gene33632:CDS |
ATAGCCATGTCCTTAAATTG+CGG | 0.663244 | 1.1:+15229629 | None:intergenic |
GTGCAGTCATAACTTCAACT+GGG | 0.663724 | 1.1:+15230206 | None:intergenic |
TCGACTTCAGCAATATCACC+CGG | 0.665510 | 1.1:+15230910 | None:intergenic |
AGATGCTAGAAGTAACGCGT+GGG | 0.672147 | 1.1:-15225998 | MS.gene33632:CDS |
GAATATGCAGTACTTCCCGT+AGG | 0.673663 | 1.1:+15227391 | None:intergenic |
TATGAGAAGTCAGAAAACCA+AGG | 0.675077 | 1.1:+15228452 | None:intergenic |
AGTATTTGACATCCTCAATG+AGG | 0.678965 | 1.1:-15227674 | MS.gene33632:CDS |
TGATAATTGACATAATCGGG+AGG | 0.681483 | 1.1:+15229674 | None:intergenic |
AAGATGCTAGAAGTAACGCG+TGG | 0.681498 | 1.1:-15225999 | MS.gene33632:CDS |
TGGAAGACGTGAAGGAGATG+TGG | 0.685338 | 1.1:-15229606 | MS.gene33632:CDS |
CACCAATTAGCAAATAGTGT+AGG | 0.686349 | 1.1:+15230448 | None:intergenic |
ATAGGGGTAAACAATATGCA+CGG | 0.689744 | 1.1:+15226316 | None:intergenic |
AGTAAACGGATCAAGTCAAG+GGG | 0.695048 | 1.1:-15229441 | MS.gene33632:CDS |
AGGTTAAATGATACAATAGG+GGG | 0.698283 | 1.1:+15228481 | None:intergenic |
CAGGGATAACCCTCACCACG+AGG | 0.704430 | 1.1:+15230472 | None:intergenic |
TTAGCAAATAGTGTAGGACA+GGG | 0.706605 | 1.1:+15230454 | None:intergenic |
TTAGGCAGCGAATCAAGCTG+CGG | 0.712248 | 1.1:+15225860 | None:intergenic |
AAGTATGATGAGAAAACACA+AGG | 0.715372 | 1.1:-15229848 | MS.gene33632:CDS |
ATTATGCAATCCGTTGACTG+GGG | 0.726680 | 1.1:-15230830 | MS.gene33632:CDS |
TAACAGAAGAAGGACTAACG+TGG | 0.734514 | 1.1:-15230348 | MS.gene33632:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 15225825 | 15232978 | 15225825 | ID=MS.gene33632 |
chr1.1 | mRNA | 15225825 | 15232978 | 15225825 | ID=MS.gene33632.t1;Parent=MS.gene33632 |
chr1.1 | exon | 15232911 | 15232978 | 15232911 | ID=MS.gene33632.t1.exon1;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15232911 | 15232978 | 15232911 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15229067 | 15230942 | 15229067 | ID=MS.gene33632.t1.exon2;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15229067 | 15230942 | 15229067 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15228680 | 15228801 | 15228680 | ID=MS.gene33632.t1.exon3;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15228680 | 15228801 | 15228680 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15228450 | 15228591 | 15228450 | ID=MS.gene33632.t1.exon4;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15228450 | 15228591 | 15228450 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15227600 | 15227824 | 15227600 | ID=MS.gene33632.t1.exon5;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15227600 | 15227824 | 15227600 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15227369 | 15227443 | 15227369 | ID=MS.gene33632.t1.exon6;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15227369 | 15227443 | 15227369 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15226252 | 15226353 | 15226252 | ID=MS.gene33632.t1.exon7;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15226252 | 15226353 | 15226252 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
chr1.1 | exon | 15225825 | 15226028 | 15225825 | ID=MS.gene33632.t1.exon8;Parent=MS.gene33632.t1 |
chr1.1 | CDS | 15225825 | 15226028 | 15225825 | ID=cds.MS.gene33632.t1;Parent=MS.gene33632.t1 |
Gene Sequence |
Protein sequence |