Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44256.t1 | XP_003629335.2 | 98.3 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 1.50E-89 | 339.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44256.t1 | G7LCY0 | 98.3 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 1.1e-89 | 339.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene44256 | 0.813009 | 3.18E-51 | -1.69E-46 |
| MS.gene04918 | MS.gene44256 | 0.835862 | 1.31E-56 | -1.69E-46 |
| MS.gene04920 | MS.gene44256 | 0.809142 | 2.19E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene44256 | 0.86243 | 5.10E-64 | -1.69E-46 |
| MS.gene049350 | MS.gene44256 | 0.818406 | 1.99E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene44256 | 0.828108 | 1.08E-54 | -1.69E-46 |
| MS.gene049666 | MS.gene44256 | 0.82291 | 1.84E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene44256 | 0.843052 | 1.78E-58 | -1.69E-46 |
| MS.gene049821 | MS.gene44256 | 0.856561 | 2.96E-62 | -1.69E-46 |
| MS.gene049824 | MS.gene44256 | 0.831711 | 1.43E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene44256 | 0.828541 | 8.49E-55 | -1.69E-46 |
| MS.gene049850 | MS.gene44256 | 0.839361 | 1.66E-57 | -1.69E-46 |
| MS.gene049873 | MS.gene44256 | 0.830144 | 3.46E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene44256 | 0.80204 | 6.77E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene44256 | 0.807147 | 5.83E-50 | -1.69E-46 |
| MS.gene050355 | MS.gene44256 | 0.809538 | 1.80E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene44256 | 0.855469 | 6.18E-62 | -1.69E-46 |
| MS.gene050561 | MS.gene44256 | 0.842931 | 1.91E-58 | -1.69E-46 |
| MS.gene050562 | MS.gene44256 | 0.839537 | 1.49E-57 | -1.69E-46 |
| MS.gene050807 | MS.gene44256 | 0.807775 | 4.29E-50 | -1.69E-46 |
| MS.gene050828 | MS.gene44256 | 0.803574 | 3.27E-49 | -1.69E-46 |
| MS.gene050901 | MS.gene44256 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene44256 | 0.81835 | 2.05E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene44256 | 0.810755 | 9.84E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene44256 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene44256 | 0.848202 | 7.12E-60 | -1.69E-46 |
| MS.gene051332 | MS.gene44256 | 0.803208 | 3.89E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene44256 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene05134 | MS.gene44256 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene44256 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene051628 | MS.gene44256 | 0.819964 | 8.81E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene44256 | 0.818009 | 2.45E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene44256 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene051719 | MS.gene44256 | 0.816843 | 4.49E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene44256 | 0.835592 | 1.53E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene44256 | 0.850607 | 1.52E-60 | -1.69E-46 |
| MS.gene051832 | MS.gene44256 | 0.801852 | 7.40E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene44256 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene44256 | 0.806169 | 9.37E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene44256 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene44256 | 0.807995 | 3.85E-50 | -1.69E-46 |
| MS.gene052108 | MS.gene44256 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene44256 | 0.803385 | 3.58E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene44256 | -0.867643 | 1.18E-65 | -1.69E-46 |
| MS.gene052516 | MS.gene44256 | 0.800448 | 1.43E-48 | -1.69E-46 |
| MS.gene052519 | MS.gene44256 | 0.850606 | 1.52E-60 | -1.69E-46 |
| MS.gene052582 | MS.gene44256 | 0.855872 | 4.71E-62 | -1.69E-46 |
| MS.gene052584 | MS.gene44256 | 0.864038 | 1.62E-64 | -1.69E-46 |
| MS.gene052773 | MS.gene44256 | 0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene44256 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene053006 | MS.gene44256 | 0.800804 | 1.21E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene44256 | 0.821709 | 3.50E-53 | -1.69E-46 |
| MS.gene05308 | MS.gene44256 | 0.815316 | 9.84E-52 | -1.69E-46 |
| MS.gene053122 | MS.gene44256 | 0.845326 | 4.35E-59 | -1.69E-46 |
| MS.gene053195 | MS.gene44256 | 0.821116 | 4.79E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene44256 | 0.872512 | 3.00E-67 | -1.69E-46 |
| MS.gene053272 | MS.gene44256 | -0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene053541 | MS.gene44256 | 0.82638 | 2.80E-54 | -1.69E-46 |
| MS.gene053542 | MS.gene44256 | 0.838464 | 2.83E-57 | -1.69E-46 |
| MS.gene053581 | MS.gene44256 | 0.812002 | 5.28E-51 | -1.69E-46 |
| MS.gene053599 | MS.gene44256 | 0.819019 | 1.45E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene44256 | 0.864309 | 1.33E-64 | -1.69E-46 |
| MS.gene05365 | MS.gene44256 | 0.812206 | 4.76E-51 | -1.69E-46 |
| MS.gene053931 | MS.gene44256 | 0.847083 | 1.45E-59 | -1.69E-46 |
| MS.gene054142 | MS.gene44256 | 0.815792 | 7.71E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene44256 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene44256 | 0.81604 | 6.79E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene44256 | 0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene44256 | 0.811235 | 7.75E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene44256 | 0.868022 | 8.89E-66 | -1.69E-46 |
| MS.gene054657 | MS.gene44256 | 0.824442 | 8.06E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene44256 | 0.819815 | 9.53E-53 | -1.69E-46 |
| MS.gene054991 | MS.gene44256 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene05517 | MS.gene44256 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene44256 | 0.823768 | 1.16E-53 | -1.69E-46 |
| MS.gene055464 | MS.gene44256 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene44256 | 0.816481 | 5.41E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene44256 | 0.831239 | 1.87E-55 | -1.69E-46 |
| MS.gene055468 | MS.gene44256 | 0.821947 | 3.08E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene44256 | 0.823188 | 1.58E-53 | -1.69E-46 |
| MS.gene055555 | MS.gene44256 | 0.819997 | 8.65E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene44256 | -0.806895 | 6.59E-50 | -1.69E-46 |
| MS.gene055586 | MS.gene44256 | 0.836791 | 7.61E-57 | -1.69E-46 |
| MS.gene055589 | MS.gene44256 | 0.827876 | 1.23E-54 | -1.69E-46 |
| MS.gene055694 | MS.gene44256 | 0.852815 | 3.60E-61 | -1.69E-46 |
| MS.gene055778 | MS.gene44256 | 0.80773 | 4.38E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene44256 | 0.840141 | 1.04E-57 | -1.69E-46 |
| MS.gene055818 | MS.gene44256 | 0.805109 | 1.56E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene44256 | 0.82022 | 7.70E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene44256 | 0.825643 | 4.19E-54 | -1.69E-46 |
| MS.gene056082 | MS.gene44256 | 0.804792 | 1.82E-49 | -1.69E-46 |
| MS.gene056091 | MS.gene44256 | 0.811109 | 8.25E-51 | -1.69E-46 |
| MS.gene056162 | MS.gene44256 | 0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene44256 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene44256 | 0.846511 | 2.07E-59 | -1.69E-46 |
| MS.gene056272 | MS.gene44256 | 0.811585 | 6.51E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene44256 | 0.838279 | 3.16E-57 | -1.69E-46 |
| MS.gene056366 | MS.gene44256 | 0.840695 | 7.45E-58 | -1.69E-46 |
| MS.gene056595 | MS.gene44256 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene056776 | MS.gene44256 | 0.851664 | 7.66E-61 | -1.69E-46 |
| MS.gene05686 | MS.gene44256 | 0.841642 | 4.20E-58 | -1.69E-46 |
| MS.gene05689 | MS.gene44256 | 0.823955 | 1.05E-53 | -1.69E-46 |
| MS.gene05690 | MS.gene44256 | 0.808881 | 2.49E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene44256 | 0.836756 | 7.76E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene44256 | 0.857487 | 1.58E-62 | -1.69E-46 |
| MS.gene057208 | MS.gene44256 | 0.848561 | 5.67E-60 | -1.69E-46 |
| MS.gene057314 | MS.gene44256 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene44256 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene44256 | 0.826766 | 2.27E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene44256 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene44256 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene44256 | 0.846659 | 1.89E-59 | -1.69E-46 |
| MS.gene057890 | MS.gene44256 | -0.809731 | 1.64E-50 | -1.69E-46 |
| MS.gene057893 | MS.gene44256 | -0.817593 | 3.04E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene44256 | 0.803376 | 3.59E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene44256 | 0.826772 | 2.26E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene44256 | 0.82641 | 2.75E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene44256 | 0.808297 | 3.32E-50 | -1.69E-46 |
| MS.gene058088 | MS.gene44256 | 0.804079 | 2.57E-49 | -1.69E-46 |
| MS.gene058216 | MS.gene44256 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene058279 | MS.gene44256 | 0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene44256 | 0.80608 | 9.79E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene44256 | 0.803995 | 2.67E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene44256 | 0.827059 | 1.93E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene44256 | 0.818999 | 1.46E-52 | -1.69E-46 |
| MS.gene058783 | MS.gene44256 | 0.834368 | 3.12E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene44256 | 0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene44256 | 0.808719 | 2.70E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene44256 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene059317 | MS.gene44256 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene05950 | MS.gene44256 | 0.813147 | 2.97E-51 | -1.69E-46 |
| MS.gene05953 | MS.gene44256 | 0.808229 | 3.43E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene44256 | 0.84259 | 2.36E-58 | -1.69E-46 |
| MS.gene059621 | MS.gene44256 | 0.808137 | 3.59E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene44256 | 0.850035 | 2.20E-60 | -1.69E-46 |
| MS.gene05978 | MS.gene44256 | 0.806813 | 6.85E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene44256 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene44256 | -0.856892 | 2.37E-62 | -1.69E-46 |
| MS.gene059935 | MS.gene44256 | 0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene060244 | MS.gene44256 | 0.801485 | 8.81E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene44256 | 0.8822 | 1.27E-70 | -1.69E-46 |
| MS.gene060429 | MS.gene44256 | 0.868726 | 5.27E-66 | -1.69E-46 |
| MS.gene060519 | MS.gene44256 | 0.813445 | 2.55E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene44256 | 0.849036 | 4.18E-60 | -1.69E-46 |
| MS.gene060587 | MS.gene44256 | 0.848465 | 6.02E-60 | -1.69E-46 |
| MS.gene060634 | MS.gene44256 | -0.841612 | 4.28E-58 | -1.69E-46 |
| MS.gene060917 | MS.gene44256 | 0.80296 | 4.38E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene44256 | 0.800006 | 1.76E-48 | -1.69E-46 |
| MS.gene060935 | MS.gene44256 | 0.840023 | 1.12E-57 | -1.69E-46 |
| MS.gene060937 | MS.gene44256 | 0.830979 | 2.16E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene44256 | 0.826805 | 2.22E-54 | -1.69E-46 |
| MS.gene061160 | MS.gene44256 | 0.80047 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44256.t1 | MTR_8g076020 | 98.256 | 344 | 6 | 0 | 1 | 344 | 1 | 344 | 0.0 | 679 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44256.t1 | AT2G17990 | 57.143 | 350 | 132 | 5 | 1 | 344 | 1 | 338 | 8.05e-129 | 372 |
| MS.gene44256.t1 | AT2G17990 | 57.143 | 350 | 132 | 5 | 1 | 344 | 11 | 348 | 1.32e-128 | 372 |
| MS.gene44256.t1 | AT5G66250 | 52.326 | 344 | 122 | 4 | 1 | 341 | 1 | 305 | 2.89e-104 | 308 |
| MS.gene44256.t1 | AT5G66250 | 52.326 | 344 | 122 | 4 | 1 | 341 | 1 | 305 | 2.89e-104 | 308 |
| MS.gene44256.t1 | AT5G66250 | 52.326 | 344 | 122 | 4 | 1 | 341 | 1 | 305 | 2.89e-104 | 308 |
| MS.gene44256.t1 | AT5G66250 | 49.451 | 364 | 122 | 5 | 1 | 341 | 1 | 325 | 4.70e-99 | 296 |
| MS.gene44256.t1 | AT2G17990 | 51.186 | 295 | 126 | 5 | 1 | 289 | 1 | 283 | 8.21e-92 | 277 |
| MS.gene44256.t1 | AT4G36105 | 42.574 | 303 | 103 | 6 | 44 | 344 | 12 | 245 | 3.98e-58 | 188 |
| MS.gene44256.t1 | AT4G36105 | 42.484 | 306 | 105 | 6 | 44 | 344 | 12 | 251 | 1.35e-57 | 187 |
Find 55 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACAGCTTCTCAATAGTT+TGG | 0.270471 | 8.1:+31427624 | None:intergenic |
| AGAGCTTAGTCGAGTGAAAC+AGG | 0.376727 | 8.1:-31427723 | MS.gene44256:CDS |
| TTCAGAGGAAGACTCGAAAA+AGG | 0.376874 | 8.1:-31428308 | MS.gene44256:CDS |
| GCAATACATCTACTTGAGAT+TGG | 0.380445 | 8.1:+31428368 | None:intergenic |
| CAAAGAAGGGGTCCCGTTAT+CGG | 0.388084 | 8.1:-31428143 | MS.gene44256:CDS |
| GCAAAGAGTTGCGGATTTGA+TGG | 0.395456 | 8.1:-31427789 | MS.gene44256:CDS |
| GGCTGAAGTTCAGAAACTTA+TGG | 0.400188 | 8.1:-31426063 | MS.gene44256:CDS |
| GAACATGTCTATGAAATTAG+AGG | 0.405432 | 8.1:-31427861 | MS.gene44256:CDS |
| TCAAGGTTTGTTAGACGAAC+AGG | 0.411492 | 8.1:-31428047 | MS.gene44256:CDS |
| TGAGATCAAGGCGAGTATAC+AGG | 0.423974 | 8.1:-31428332 | MS.gene44256:CDS |
| TCCCGTTATCGGATTGGTCT+AGG | 0.436387 | 8.1:-31428132 | MS.gene44256:CDS |
| CAAGAAAGAAGCTCAACTTC+TGG | 0.441607 | 8.1:-31426009 | MS.gene44256:CDS |
| TCCTAGACCAATCCGATAAC+GGG | 0.442238 | 8.1:+31428131 | None:intergenic |
| GGTGAAGATATTGCATTGTC+GGG | 0.449678 | 8.1:-31428448 | MS.gene44256:CDS |
| AGTTGGAAAGACTACTCAAT+TGG | 0.449839 | 8.1:-31426108 | MS.gene44256:CDS |
| ATCGGAAACTGCACTTGAAA+AGG | 0.451142 | 8.1:-31427936 | MS.gene44256:CDS |
| GGGTGAAGATATTGCATTGT+CGG | 0.452653 | 8.1:-31428449 | MS.gene44256:CDS |
| GAACAGGACGCTGTTTATAT+AGG | 0.461877 | 8.1:-31428031 | MS.gene44256:CDS |
| TCTTGGGAGCACAGGCTAGT+TGG | 0.465821 | 8.1:-31426125 | MS.gene44256:intron |
| GTCTATGAAATTAGAGGAGA+TGG | 0.468338 | 8.1:-31427855 | MS.gene44256:CDS |
| AGTAGATGTATTGCAAGAAA+AGG | 0.481789 | 8.1:-31428359 | MS.gene44256:CDS |
| GTAGGGCTTGTTGACAAAGA+AGG | 0.487158 | 8.1:-31428157 | MS.gene44256:CDS |
| TTCCTAGACCAATCCGATAA+CGG | 0.504695 | 8.1:+31428130 | None:intergenic |
| TAGGGCTTGTTGACAAAGAA+GGG | 0.509230 | 8.1:-31428156 | MS.gene44256:CDS |
| TGATGGAAGCTCTTGTGAAA+AGG | 0.517318 | 8.1:-31427973 | MS.gene44256:CDS |
| GATGGAAGCTCTTGTGAAAA+GGG | 0.523267 | 8.1:-31427972 | MS.gene44256:CDS |
| AGAAAAGGTTAATGAGATCA+AGG | 0.523536 | 8.1:-31428344 | MS.gene44256:CDS |
| AAAGTCAAAAGCTAGAATCA+TGG | 0.527633 | 8.1:-31428230 | MS.gene44256:CDS |
| AAGGGGTCCCGTTATCGGAT+TGG | 0.533469 | 8.1:-31428138 | MS.gene44256:CDS |
| TGGAAAGACTACTCAATTGG+AGG | 0.542813 | 8.1:-31426105 | MS.gene44256:CDS |
| CGATATGCGGCAAAGAGTTG+CGG | 0.550984 | 8.1:-31427798 | MS.gene44256:CDS |
| GGCGAGTATACAGGGTTCAG+AGG | 0.561421 | 8.1:-31428323 | MS.gene44256:CDS |
| TCTTGTGATACGTGGAAGGA+AGG | 0.562427 | 8.1:-31428403 | MS.gene44256:CDS |
| GAATGAACAATGTAAGATGA+TGG | 0.563082 | 8.1:-31425982 | MS.gene44256:CDS |
| CATTGAACAGGAAATGGCGG+CGG | 0.565017 | 8.1:-31428470 | None:intergenic |
| CGGGTCAATCTTGTGATACG+TGG | 0.567538 | 8.1:-31428411 | MS.gene44256:CDS |
| GAGATCAAGGCGAGTATACA+GGG | 0.570374 | 8.1:-31428331 | MS.gene44256:CDS |
| CACAAGAGCTTCCATCACAT+CGG | 0.577039 | 8.1:+31427979 | None:intergenic |
| GGGTGAGAAAATGCAGAAAG+AGG | 0.582753 | 8.1:-31426084 | MS.gene44256:CDS |
| CTATTGAGAAGCTGTTTGAA+CGG | 0.594283 | 8.1:-31427619 | MS.gene44256:intron |
| ATTGAACAGGAAATGGCGGC+GGG | 0.595048 | 8.1:-31428469 | None:intergenic |
| GATACTGAACTCTGTTCAGA+TGG | 0.598085 | 8.1:-31428005 | MS.gene44256:CDS |
| TGATACGTGGAAGGAAGGAA+TGG | 0.599000 | 8.1:-31428398 | MS.gene44256:CDS |
| ATAGGAATTAGCCGTCATCA+AGG | 0.599347 | 8.1:-31428064 | MS.gene44256:CDS |
| TCAGATGGTCACCGATGTGA+TGG | 0.600291 | 8.1:-31427990 | MS.gene44256:CDS |
| GAAGATGCAGAATCGTGGAT+AGG | 0.605981 | 8.1:-31428082 | MS.gene44256:CDS |
| TCAATCTTGTGATACGTGGA+AGG | 0.612583 | 8.1:-31428407 | MS.gene44256:CDS |
| CATTTAGCTCATACGTCGTG+TGG | 0.618137 | 8.1:-31428199 | MS.gene44256:CDS |
| CGTCTAACAAACCTTGATGA+CGG | 0.621672 | 8.1:+31428053 | None:intergenic |
| GGAAAGACTACTCAATTGGA+GGG | 0.626700 | 8.1:-31426104 | MS.gene44256:CDS |
| ATGACGAAGATGCAGAATCG+TGG | 0.632880 | 8.1:-31428087 | MS.gene44256:CDS |
| TAGTAGTCTAATCACAGTGA+GGG | 0.635665 | 8.1:-31427675 | MS.gene44256:CDS |
| CACGACGTATGAGCTAAATG+TGG | 0.682059 | 8.1:+31428202 | None:intergenic |
| AGGGCTTGTTGACAAAGAAG+GGG | 0.701081 | 8.1:-31428155 | MS.gene44256:CDS |
| TTAGTAGTCTAATCACAGTG+AGG | 0.744586 | 8.1:-31427676 | MS.gene44256:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTCTATAAAATTATCT+GGG | + | chr8.1:31427556-31427575 | None:intergenic | 10.0% |
| !!! | AGATAATTTTATAGAAAATT+GGG | - | chr8.1:31427556-31427575 | MS.gene44256:intron | 10.0% |
| !! | AAAATTAAACTTCAGAATTA+AGG | + | chr8.1:31427055-31427074 | None:intergenic | 15.0% |
| !! | CACAAAACAAATAATTTATT+AGG | + | chr8.1:31427227-31427246 | None:intergenic | 15.0% |
| !!! | AAGTTTAATTTTCTTCATTA+TGG | - | chr8.1:31427063-31427082 | MS.gene44256:intron | 15.0% |
| !!! | CAATTTTCTATAAAATTATC+TGG | + | chr8.1:31427557-31427576 | None:intergenic | 15.0% |
| !!! | CAGATAATTTTATAGAAAAT+TGG | - | chr8.1:31427555-31427574 | MS.gene44256:intron | 15.0% |
| !!! | TTTTAAATTACACGTTAATT+TGG | - | chr8.1:31427391-31427410 | MS.gene44256:intron | 15.0% |
| !! | AAAATAAAAATCATGCAGTA+AGG | + | chr8.1:31428272-31428291 | None:intergenic | 20.0% |
| !! | ACATCCTTTGATTAATTTAA+GGG | - | chr8.1:31427108-31427127 | MS.gene44256:intron | 20.0% |
| !! | TACATAAGCAATTATATGAT+AGG | - | chr8.1:31427960-31427979 | MS.gene44256:CDS | 20.0% |
| !! | TACATCCTTTGATTAATTTA+AGG | - | chr8.1:31427107-31427126 | MS.gene44256:intron | 20.0% |
| !! | TATAGAAAATTGGGTATTAT+GGG | - | chr8.1:31427565-31427584 | MS.gene44256:intron | 20.0% |
| !! | TTAAAAGTTAACTATCAAAG+AGG | + | chr8.1:31428051-31428070 | None:intergenic | 20.0% |
| !! | TTATAGAAAATTGGGTATTA+TGG | - | chr8.1:31427564-31427583 | MS.gene44256:intron | 20.0% |
| !!! | CTTTGATAGTTAACTTTTAA+GGG | - | chr8.1:31428051-31428070 | MS.gene44256:CDS | 20.0% |
| !!! | TCATTTTTAAAGCCATAATT+TGG | - | chr8.1:31427435-31427454 | MS.gene44256:intron | 20.0% |
| !!! | TCTTTGATAGTTAACTTTTA+AGG | - | chr8.1:31428050-31428069 | MS.gene44256:CDS | 20.0% |
| !!! | TGCATGATTTTTATTTTCTT+GGG | - | chr8.1:31428275-31428294 | MS.gene44256:CDS | 20.0% |
| ! | AAATAGGATCTTAAGTGATT+TGG | - | chr8.1:31428020-31428039 | MS.gene44256:CDS | 25.0% |
| ! | AAATCACTTAAGATCCTATT+TGG | + | chr8.1:31428021-31428040 | None:intergenic | 25.0% |
| ! | AATTTAGCATGAAATTATGC+AGG | + | chr8.1:31426927-31426946 | None:intergenic | 25.0% |
| ! | ATTAGGATGATCTATGTTAT+TGG | + | chr8.1:31427210-31427229 | None:intergenic | 25.0% |
| ! | CATTCCCTTAAATTAATCAA+AGG | + | chr8.1:31427115-31427134 | None:intergenic | 25.0% |
| ! | CTATAAAATTATCTGGGAAA+AGG | + | chr8.1:31427550-31427569 | None:intergenic | 25.0% |
| ! | CTTTAACAAAAGATAAAACG+AGG | + | chr8.1:31427769-31427788 | None:intergenic | 25.0% |
| !! | AGGTCAAATTGTTTTCATAT+AGG | + | chr8.1:31427749-31427768 | None:intergenic | 25.0% |
| !! | ATATAGGAGTATAATTACGA+TGG | + | chr8.1:31428101-31428120 | None:intergenic | 25.0% |
| !! | CTTATCTATCCAATTTGTTT+AGG | - | chr8.1:31427169-31427188 | MS.gene44256:intron | 25.0% |
| !! | TATAGGAGTATAATTACGAT+GGG | + | chr8.1:31428100-31428119 | None:intergenic | 25.0% |
| !!! | ATAGTATTTTGAACGATATG+CGG | - | chr8.1:31426605-31426624 | MS.gene44256:intron | 25.0% |
| !!! | ATTAAGTTGTTTCTCCAAAT+AGG | - | chr8.1:31428004-31428023 | MS.gene44256:CDS | 25.0% |
| !!! | CTGCATGATTTTTATTTTCT+TGG | - | chr8.1:31428274-31428293 | MS.gene44256:CDS | 25.0% |
| !!! | CTTATTTTTATGAGCTTTCT+AGG | - | chr8.1:31427696-31427715 | MS.gene44256:CDS | 25.0% |
| !!! | TTATGAGTTTTCTTGATGAT+AGG | - | chr8.1:31426959-31426978 | MS.gene44256:intron | 25.0% |
| !!! | TTTCCTAAGTTTTTTGCTTT+GGG | - | chr8.1:31427302-31427321 | MS.gene44256:intron | 25.0% |
| !!! | TTTTAAAGCCATAATTTGGA+TGG | - | chr8.1:31427439-31427458 | MS.gene44256:intron | 25.0% |
| !!! | TTTTTTATCATCGTAAAAGC+TGG | - | chr8.1:31427482-31427501 | MS.gene44256:intron | 25.0% |
| AAAGTCAAAAGCTAGAATCA+TGG | - | chr8.1:31426186-31426205 | MS.gene44256:intron | 30.0% | |
| AGAAAAGGTTAATGAGATCA+AGG | - | chr8.1:31426072-31426091 | MS.gene44256:CDS | 30.0% | |
| AGAAACCAACCTAAACAAAT+TGG | + | chr8.1:31427181-31427200 | None:intergenic | 30.0% | |
| AGTAGATGTATTGCAAGAAA+AGG | - | chr8.1:31426057-31426076 | MS.gene44256:CDS | 30.0% | |
| ATAAGCTTATGAACCCATTT+GGG | - | chr8.1:31427815-31427834 | MS.gene44256:CDS | 30.0% | |
| ATACCCAAAGCAAAAAACTT+AGG | + | chr8.1:31427308-31427327 | None:intergenic | 30.0% | |
| CCTATATCATTGTGTTTGTT+GGG | - | chr8.1:31428114-31428133 | MS.gene44256:CDS | 30.0% | |
| GAAAAGGAAAAAGTGAGTTT+AGG | - | chr8.1:31426496-31426515 | MS.gene44256:intron | 30.0% | |
| GAACATGTCTATGAAATTAG+AGG | - | chr8.1:31426555-31426574 | MS.gene44256:intron | 30.0% | |
| GAATGAACAATGTAAGATGA+TGG | - | chr8.1:31428434-31428453 | MS.gene44256:CDS | 30.0% | |
| TATAAGCTTATGAACCCATT+TGG | - | chr8.1:31427814-31427833 | MS.gene44256:CDS | 30.0% | |
| TATTAAGAGACTGTTTGAGA+GGG | - | chr8.1:31427631-31427650 | MS.gene44256:CDS | 30.0% | |
| TCCTATATCATTGTGTTTGT+TGG | - | chr8.1:31428113-31428132 | MS.gene44256:CDS | 30.0% | |
| TTCTGTTCATATATGCTTAG+TGG | - | chr8.1:31428180-31428199 | MS.gene44256:CDS | 30.0% | |
| TTTCAAAGCCATCCAAATTA+TGG | + | chr8.1:31427450-31427469 | None:intergenic | 30.0% | |
| ! | AAAAGGAATTAGAGGTTTTG+TGG | - | chr8.1:31426125-31426144 | MS.gene44256:intron | 30.0% |
| ! | AAATGGGTTCATAAGCTTAT+AGG | + | chr8.1:31427815-31427834 | None:intergenic | 30.0% |
| ! | TCTATCCAATTTGTTTAGGT+TGG | - | chr8.1:31427173-31427192 | MS.gene44256:intron | 30.0% |
| !! | GATAGTTAACTTTTAAGGGA+GGG | - | chr8.1:31428055-31428074 | MS.gene44256:CDS | 30.0% |
| !! | TCTTGTGAAAAGGGTTTTAT+TGG | - | chr8.1:31426453-31426472 | MS.gene44256:intron | 30.0% |
| !! | TGATAGTTAACTTTTAAGGG+AGG | - | chr8.1:31428054-31428073 | MS.gene44256:CDS | 30.0% |
| !!! | CTTTCCTAAGTTTTTTGCTT+TGG | - | chr8.1:31427301-31427320 | MS.gene44256:intron | 30.0% |
| AATTGCAGTGTTCACATAGA+AGG | - | chr8.1:31428214-31428233 | MS.gene44256:CDS | 35.0% | |
| ACAATAGCAAGTGAAAAGGA+TGG | - | chr8.1:31427366-31427385 | MS.gene44256:intron | 35.0% | |
| AGACTCGAAAAAGGAATTAG+AGG | - | chr8.1:31426117-31426136 | MS.gene44256:intron | 35.0% | |
| AGTTGGAAAGACTACTCAAT+TGG | - | chr8.1:31428308-31428327 | MS.gene44256:CDS | 35.0% | |
| CAAACAGCTTCTCAATAGTT+TGG | + | chr8.1:31426795-31426814 | None:intergenic | 35.0% | |
| CAAGTGTCTTGACTATTATC+TGG | - | chr8.1:31426851-31426870 | MS.gene44256:intron | 35.0% | |
| CCCAACAAACACAATGATAT+AGG | + | chr8.1:31428117-31428136 | None:intergenic | 35.0% | |
| CTATTGAGAAGCTGTTTGAA+CGG | - | chr8.1:31426797-31426816 | MS.gene44256:intron | 35.0% | |
| GCAATACATCTACTTGAGAT+TGG | + | chr8.1:31426051-31426070 | None:intergenic | 35.0% | |
| GTATTAAGAGACTGTTTGAG+AGG | - | chr8.1:31427630-31427649 | MS.gene44256:CDS | 35.0% | |
| GTCTATGAAATTAGAGGAGA+TGG | - | chr8.1:31426561-31426580 | MS.gene44256:intron | 35.0% | |
| GTGGAATCAAAAAGTTGGAT+GGG | - | chr8.1:31426236-31426255 | MS.gene44256:intron | 35.0% | |
| TAGTAGTCTAATCACAGTGA+GGG | - | chr8.1:31426741-31426760 | MS.gene44256:intron | 35.0% | |
| TGGAATCAAAAAGTTGGATG+GGG | - | chr8.1:31426237-31426256 | MS.gene44256:intron | 35.0% | |
| TGTGGAATCAAAAAGTTGGA+TGG | - | chr8.1:31426235-31426254 | MS.gene44256:intron | 35.0% | |
| TTAGTAGTCTAATCACAGTG+AGG | - | chr8.1:31426740-31426759 | MS.gene44256:intron | 35.0% | |
| TTCAGAATTAAGGACCTGTT+TGG | + | chr8.1:31427045-31427064 | None:intergenic | 35.0% | |
| !! | AGTTTGGAATTGCTTTTCTG+AGG | + | chr8.1:31426779-31426798 | None:intergenic | 35.0% |
| !! | CTTCATAGAAGTGCTAAGAA+AGG | + | chr8.1:31427142-31427161 | None:intergenic | 35.0% |
| !! | GTGTTTGTTGGGTTTTTCTT+GGG | - | chr8.1:31428125-31428144 | MS.gene44256:CDS | 35.0% |
| !! | TGTGTTTGTTGGGTTTTTCT+TGG | - | chr8.1:31428124-31428143 | MS.gene44256:CDS | 35.0% |
| !!! | TGTGAAAAGGGTTTTATTGG+CGG | - | chr8.1:31426456-31426475 | MS.gene44256:intron | 35.0% |
| !!! | TTTTATTTTCTTGGGAGCAC+AGG | - | chr8.1:31428283-31428302 | MS.gene44256:CDS | 35.0% |
| AATTAAGGACCTGTTTGGCA+TGG | + | chr8.1:31427040-31427059 | None:intergenic | 40.0% | |
| ACCAAAAGACATCGTGAACA+TGG | + | chr8.1:31427276-31427295 | None:intergenic | 40.0% | |
| ATAGGAATTAGCCGTCATCA+AGG | - | chr8.1:31426352-31426371 | MS.gene44256:intron | 40.0% | |
| ATCAAAAAGTTGGATGGGGT+AGG | - | chr8.1:31426241-31426260 | MS.gene44256:intron | 40.0% | |
| ATCGGAAACTGCACTTGAAA+AGG | - | chr8.1:31426480-31426499 | MS.gene44256:intron | 40.0% | |
| CAAGAAAGAAGCTCAACTTC+TGG | - | chr8.1:31428407-31428426 | MS.gene44256:CDS | 40.0% | |
| CCACACAATAGCAAGTGAAA+AGG | - | chr8.1:31427362-31427381 | MS.gene44256:intron | 40.0% | |
| CGTCTAACAAACCTTGATGA+CGG | + | chr8.1:31426366-31426385 | None:intergenic | 40.0% | |
| GAACAGGACGCTGTTTATAT+AGG | - | chr8.1:31426385-31426404 | MS.gene44256:intron | 40.0% | |
| GAACATGGCAACTTTCAACA+AGG | + | chr8.1:31427261-31427280 | None:intergenic | 40.0% | |
| GACTGTTTGAGAGGGTTTAT+AGG | - | chr8.1:31427639-31427658 | MS.gene44256:CDS | 40.0% | |
| GATACTGAACTCTGTTCAGA+TGG | - | chr8.1:31426411-31426430 | MS.gene44256:intron | 40.0% | |
| GATGGAAGCTCTTGTGAAAA+GGG | - | chr8.1:31426444-31426463 | MS.gene44256:intron | 40.0% | |
| GCATCTCATACTACTCAATG+TGG | + | chr8.1:31427602-31427621 | None:intergenic | 40.0% | |
| GGAAAAAGTGAGTTTAGGTC+AGG | - | chr8.1:31426501-31426520 | MS.gene44256:intron | 40.0% | |
| GGAAAGACTACTCAATTGGA+GGG | - | chr8.1:31428312-31428331 | MS.gene44256:CDS | 40.0% | |
| GGCTGAAGTTCAGAAACTTA+TGG | - | chr8.1:31428353-31428372 | MS.gene44256:CDS | 40.0% | |
| GGGTGAAGATATTGCATTGT+CGG | - | chr8.1:31425967-31425986 | MS.gene44256:CDS | 40.0% | |
| GGTGAAGATATTGCATTGTC+GGG | - | chr8.1:31425968-31425987 | MS.gene44256:CDS | 40.0% | |
| GTCGTGTGGAATCAAAAAGT+TGG | - | chr8.1:31426231-31426250 | MS.gene44256:intron | 40.0% | |
| TCAAAAAGTTGGATGGGGTA+GGG | - | chr8.1:31426242-31426261 | MS.gene44256:intron | 40.0% | |
| TCAATCTTGTGATACGTGGA+AGG | - | chr8.1:31426009-31426028 | MS.gene44256:CDS | 40.0% | |
| TGATGGAAGCTCTTGTGAAA+AGG | - | chr8.1:31426443-31426462 | MS.gene44256:intron | 40.0% | |
| TGGAAAGACTACTCAATTGG+AGG | - | chr8.1:31428311-31428330 | MS.gene44256:CDS | 40.0% | |
| TTCAGAGGAAGACTCGAAAA+AGG | - | chr8.1:31426108-31426127 | MS.gene44256:CDS | 40.0% | |
| TTCCTAGACCAATCCGATAA+CGG | + | chr8.1:31426289-31426308 | None:intergenic | 40.0% | |
| ! | TTGTTGGGTTTTTCTTGGGT+GGG | - | chr8.1:31428129-31428148 | MS.gene44256:CDS | 40.0% |
| ! | TTTGTTGGGTTTTTCTTGGG+TGG | - | chr8.1:31428128-31428147 | MS.gene44256:CDS | 40.0% |
| ! | TTTTTCGTTTGACCTAGTCG+TGG | - | chr8.1:31426891-31426910 | MS.gene44256:intron | 40.0% |
| !! | CATAGAAGTGCTAAGAAAGG+AGG | + | chr8.1:31427139-31427158 | None:intergenic | 40.0% |
| !! | GCTGGCTTAGAATATGCTTT+TGG | - | chr8.1:31427500-31427519 | MS.gene44256:intron | 40.0% |
| !! | GTCGGGTTTGAAGTCTTTTT+CGG | - | chr8.1:31425985-31426004 | MS.gene44256:CDS | 40.0% |
| !! | TAGGGCTTGTTGACAAAGAA+GGG | - | chr8.1:31426260-31426279 | MS.gene44256:intron | 40.0% |
| !! | TCAAGGTTTGTTAGACGAAC+AGG | - | chr8.1:31426369-31426388 | MS.gene44256:intron | 40.0% |
| !! | TCGGGTTTGAAGTCTTTTTC+GGG | - | chr8.1:31425986-31426005 | MS.gene44256:CDS | 40.0% |
| !!! | AAGGGTTTTATTGGCGGAAT+CGG | - | chr8.1:31426462-31426481 | MS.gene44256:intron | 40.0% |
| !!! | CCTTTTCACTTGCTATTGTG+TGG | + | chr8.1:31427365-31427384 | None:intergenic | 40.0% |
| ACGATGGGCATCTAAGTACT+TGG | + | chr8.1:31428085-31428104 | None:intergenic | 45.0% | |
| AGAGCTTAGTCGAGTGAAAC+AGG | - | chr8.1:31426693-31426712 | MS.gene44256:intron | 45.0% | |
| AGTTCACAACCATGCCAAAC+AGG | - | chr8.1:31427028-31427047 | MS.gene44256:intron | 45.0% | |
| ATGACGAAGATGCAGAATCG+TGG | - | chr8.1:31426329-31426348 | MS.gene44256:intron | 45.0% | |
| CACAAGAGCTTCCATCACAT+CGG | + | chr8.1:31426440-31426459 | None:intergenic | 45.0% | |
| CACGACGTATGAGCTAAATG+TGG | + | chr8.1:31426217-31426236 | None:intergenic | 45.0% | |
| CGATGGGCATCTAAGTACTT+GGG | + | chr8.1:31428084-31428103 | None:intergenic | 45.0% | |
| GAAACGAACCTAAGACCTTG+AGG | + | chr8.1:31427883-31427902 | None:intergenic | 45.0% | |
| GAAGATGCAGAATCGTGGAT+AGG | - | chr8.1:31426334-31426353 | MS.gene44256:intron | 45.0% | |
| GAGATCAAGGCGAGTATACA+GGG | - | chr8.1:31426085-31426104 | MS.gene44256:CDS | 45.0% | |
| GATGGGCATCTAAGTACTTG+GGG | + | chr8.1:31428083-31428102 | None:intergenic | 45.0% | |
| GCAAAGAGTTGCGGATTTGA+TGG | - | chr8.1:31426627-31426646 | MS.gene44256:intron | 45.0% | |
| GCTTATGAACCCATTTGGGT+TGG | - | chr8.1:31427819-31427838 | MS.gene44256:CDS | 45.0% | |
| GGGTGAGAAAATGCAGAAAG+AGG | - | chr8.1:31428332-31428351 | MS.gene44256:CDS | 45.0% | |
| TATTGTGTGGAGAGAGTGAC+AGG | + | chr8.1:31427352-31427371 | None:intergenic | 45.0% | |
| TCCTAGACCAATCCGATAAC+GGG | + | chr8.1:31426288-31426307 | None:intergenic | 45.0% | |
| TCTTGTGATACGTGGAAGGA+AGG | - | chr8.1:31426013-31426032 | MS.gene44256:CDS | 45.0% | |
| TGAGATCAAGGCGAGTATAC+AGG | - | chr8.1:31426084-31426103 | MS.gene44256:CDS | 45.0% | |
| TGATACGTGGAAGGAAGGAA+TGG | - | chr8.1:31426018-31426037 | MS.gene44256:CDS | 45.0% | |
| TTTCTCCCCGGAGCTAATTT+GGG | - | chr8.1:31427899-31427918 | MS.gene44256:CDS | 45.0% | |
| ! | CATTTAGCTCATACGTCGTG+TGG | - | chr8.1:31426217-31426236 | MS.gene44256:intron | 45.0% |
| ! | GCCATGTTCACGATGTCTTT+TGG | - | chr8.1:31427272-31427291 | MS.gene44256:intron | 45.0% |
| ! | TGTTGGGTTTTTCTTGGGTG+GGG | - | chr8.1:31428130-31428149 | MS.gene44256:CDS | 45.0% |
| !! | AGGGCTTGTTGACAAAGAAG+GGG | - | chr8.1:31426261-31426280 | MS.gene44256:intron | 45.0% |
| !! | GTAGGGCTTGTTGACAAAGA+AGG | - | chr8.1:31426259-31426278 | MS.gene44256:intron | 45.0% |
| ACGAACCTAAGACCTTGAGG+AGG | + | chr8.1:31427880-31427899 | None:intergenic | 50.0% | |
| ATGCTCCTCCTCAAGGTCTT+AGG | - | chr8.1:31427872-31427891 | MS.gene44256:CDS | 50.0% | |
| CAAAGAAGGGGTCCCGTTAT+CGG | - | chr8.1:31426273-31426292 | MS.gene44256:intron | 50.0% | |
| CGATATGCGGCAAAGAGTTG+CGG | - | chr8.1:31426618-31426637 | MS.gene44256:intron | 50.0% | |
| CGGGTCAATCTTGTGATACG+TGG | - | chr8.1:31426005-31426024 | MS.gene44256:CDS | 50.0% | |
| GGGAAAAGGTAGCCTGAACA+AGG | + | chr8.1:31427536-31427555 | None:intergenic | 50.0% | |
| GTCTTAGGTTCGTTTCTCCC+CGG | - | chr8.1:31427887-31427906 | MS.gene44256:CDS | 50.0% | |
| GTTTCTCCCCGGAGCTAATT+TGG | - | chr8.1:31427898-31427917 | MS.gene44256:CDS | 50.0% | |
| TAGCCCACCCAAATTAGCTC+CGG | + | chr8.1:31427909-31427928 | None:intergenic | 50.0% | |
| TCAGATGGTCACCGATGTGA+TGG | - | chr8.1:31426426-31426445 | MS.gene44256:intron | 50.0% | |
| TTCGTTTGACCTAGTCGTGG+TGG | - | chr8.1:31426894-31426913 | MS.gene44256:intron | 50.0% | |
| TTGGAGTATGCTCCTCCTCA+AGG | - | chr8.1:31427865-31427884 | MS.gene44256:CDS | 50.0% | |
| ! | GGAAGTATACCACCACGACT+AGG | + | chr8.1:31426906-31426925 | None:intergenic | 50.0% |
| ! | GTTTTTCTTGGGTGGGGACT+GGG | - | chr8.1:31428136-31428155 | MS.gene44256:CDS | 50.0% |
| ! | TTGAGGAGGAGCATACTCCA+AGG | + | chr8.1:31427866-31427885 | None:intergenic | 50.0% |
| ! | TTTTTCTTGGGTGGGGACTG+GGG | - | chr8.1:31428137-31428156 | MS.gene44256:CDS | 50.0% |
| !! | GAGATGGAGCGTTTTGCTTC+GGG | - | chr8.1:31426577-31426596 | MS.gene44256:intron | 50.0% |
| !! | GGAAGCGTCTATCCTTGTTC+AGG | - | chr8.1:31427521-31427540 | MS.gene44256:intron | 50.0% |
| !! | GGAGATGGAGCGTTTTGCTT+CGG | - | chr8.1:31426576-31426595 | MS.gene44256:intron | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+TGG | - | chr8.1:31427846-31427865 | MS.gene44256:CDS | 50.0% |
| !! | TCCCGTTATCGGATTGGTCT+AGG | - | chr8.1:31426284-31426303 | MS.gene44256:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGACTT+GGG | - | chr8.1:31427839-31427858 | MS.gene44256:CDS | 50.0% |
| !! | TTGGCCTGGTGGTATTGACT+TGG | - | chr8.1:31427838-31427857 | MS.gene44256:CDS | 50.0% |
| AAGGGGTCCCGTTATCGGAT+TGG | - | chr8.1:31426278-31426297 | MS.gene44256:intron | 55.0% | |
| ACCACCAGGCCAACCCAAAT+GGG | + | chr8.1:31427831-31427850 | None:intergenic | 55.0% | |
| AGCCCACCCAAATTAGCTCC+GGG | + | chr8.1:31427908-31427927 | None:intergenic | 55.0% | |
| GGCGAGTATACAGGGTTCAG+AGG | - | chr8.1:31426093-31426112 | MS.gene44256:CDS | 55.0% | |
| GGTCCCAAGTCAATACCACC+AGG | + | chr8.1:31427845-31427864 | None:intergenic | 55.0% | |
| TACCACCAGGCCAACCCAAA+TGG | + | chr8.1:31427832-31427851 | None:intergenic | 55.0% | |
| TCCCCGGAGCTAATTTGGGT+GGG | - | chr8.1:31427903-31427922 | MS.gene44256:CDS | 55.0% | |
| ! | GGTTTTTCTTGGGTGGGGAC+TGG | - | chr8.1:31428135-31428154 | MS.gene44256:CDS | 55.0% |
| ! | TCTTGGGAGCACAGGCTAGT+TGG | - | chr8.1:31428291-31428310 | MS.gene44256:CDS | 55.0% |
| ! | TTTTCTTGGGTGGGGACTGG+GGG | - | chr8.1:31428138-31428157 | MS.gene44256:CDS | 55.0% |
| !! | TGAACCCATTTGGGTTGGCC+TGG | - | chr8.1:31427824-31427843 | MS.gene44256:CDS | 55.0% |
| CTCCCCGGAGCTAATTTGGG+TGG | - | chr8.1:31427902-31427921 | MS.gene44256:CDS | 60.0% | |
| GCCCACCCAAATTAGCTCCG+GGG | + | chr8.1:31427907-31427926 | None:intergenic | 60.0% | |
| !! | ACCCATTTGGGTTGGCCTGG+TGG | - | chr8.1:31427827-31427846 | MS.gene44256:CDS | 60.0% |
| TCTTGGGTGGGGACTGGGGG+TGG | - | chr8.1:31428141-31428160 | MS.gene44256:CDS | 70.0% | |
| GGGTGGGGACTGGGGGTGGT+GGG | - | chr8.1:31428145-31428164 | MS.gene44256:CDS | 75.0% | |
| TGGGTGGGGACTGGGGGTGG+TGG | - | chr8.1:31428144-31428163 | MS.gene44256:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 31425959 | 31428479 | 31425959 | ID=MS.gene44256 |
| chr8.1 | mRNA | 31425959 | 31428479 | 31425959 | ID=MS.gene44256.t1;Parent=MS.gene44256 |
| chr8.1 | exon | 31427620 | 31428479 | 31427620 | ID=MS.gene44256.t1.exon1;Parent=MS.gene44256.t1 |
| chr8.1 | CDS | 31427620 | 31428479 | 31427620 | ID=cds.MS.gene44256.t1;Parent=MS.gene44256.t1 |
| chr8.1 | exon | 31425959 | 31426133 | 31425959 | ID=MS.gene44256.t1.exon2;Parent=MS.gene44256.t1 |
| chr8.1 | CDS | 31425959 | 31426133 | 31425959 | ID=cds.MS.gene44256.t1;Parent=MS.gene44256.t1 |
| Gene Sequence |
| Protein sequence |
