Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46027.t1 | XP_013449039.1 | 95.6 | 569 | 11 | 1 | 4 | 558 | 3 | 571 | 0.00E+00 | 1133.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46027.t1 | Q9LFD2 | 52.8 | 557 | 245 | 6 | 14 | 558 | 16 | 566 | 1.5e-175 | 617.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46027.t1 | A0A072U0V9 | 95.6 | 569 | 11 | 1 | 4 | 558 | 3 | 571 | 0.0e+00 | 1133.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene46027 | -0.805764 | 1.14E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene46027 | -0.811025 | 8.61E-51 | -1.69E-46 |
| MS.gene049259 | MS.gene46027 | 0.855291 | 6.96E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene46027 | -0.826048 | 3.36E-54 | -1.69E-46 |
| MS.gene049402 | MS.gene46027 | 0.802607 | 5.18E-49 | -1.69E-46 |
| MS.gene049483 | MS.gene46027 | 0.842706 | 2.19E-58 | -1.69E-46 |
| MS.gene049549 | MS.gene46027 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene46027 | 0.860765 | 1.64E-63 | -1.69E-46 |
| MS.gene049634 | MS.gene46027 | 0.851303 | 9.69E-61 | -1.69E-46 |
| MS.gene049710 | MS.gene46027 | 0.815563 | 8.67E-52 | -1.69E-46 |
| MS.gene050095 | MS.gene46027 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene46027 | -0.804465 | 2.13E-49 | -1.69E-46 |
| MS.gene050173 | MS.gene46027 | 0.824405 | 8.22E-54 | -1.69E-46 |
| MS.gene050216 | MS.gene46027 | -0.845488 | 3.94E-59 | -1.69E-46 |
| MS.gene050380 | MS.gene46027 | 0.83356 | 4.97E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene46027 | 0.914742 | 1.34E-84 | -1.69E-46 |
| MS.gene050496 | MS.gene46027 | -0.800641 | 1.31E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene46027 | -0.83487 | 2.33E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene46027 | -0.847547 | 1.08E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene46027 | -0.804774 | 1.84E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene46027 | 0.818664 | 1.74E-52 | -1.69E-46 |
| MS.gene050809 | MS.gene46027 | 0.805824 | 1.11E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene46027 | -0.836919 | 7.05E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene46027 | -0.838201 | 3.31E-57 | -1.69E-46 |
| MS.gene050883 | MS.gene46027 | 0.874453 | 6.67E-68 | -1.69E-46 |
| MS.gene050986 | MS.gene46027 | -0.814591 | 1.43E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene46027 | 0.849218 | 3.72E-60 | -1.69E-46 |
| MS.gene05104 | MS.gene46027 | 0.855594 | 5.68E-62 | -1.69E-46 |
| MS.gene051127 | MS.gene46027 | 0.883026 | 6.35E-71 | -1.69E-46 |
| MS.gene051138 | MS.gene46027 | 0.873582 | 1.32E-67 | -1.69E-46 |
| MS.gene051364 | MS.gene46027 | 0.817518 | 3.16E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene46027 | 0.816206 | 6.23E-52 | -1.69E-46 |
| MS.gene05141 | MS.gene46027 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene46027 | -0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene051632 | MS.gene46027 | 0.823409 | 1.41E-53 | -1.69E-46 |
| MS.gene051651 | MS.gene46027 | 0.80073 | 1.26E-48 | -1.69E-46 |
| MS.gene051863 | MS.gene46027 | 0.824693 | 7.03E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene46027 | 0.833681 | 4.64E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene46027 | -0.80397 | 2.70E-49 | -1.69E-46 |
| MS.gene052211 | MS.gene46027 | 0.81884 | 1.59E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene46027 | 0.800062 | 1.72E-48 | -1.69E-46 |
| MS.gene052802 | MS.gene46027 | 0.814382 | 1.58E-51 | -1.69E-46 |
| MS.gene052805 | MS.gene46027 | 0.804428 | 2.17E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene46027 | -0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene053031 | MS.gene46027 | 0.803054 | 4.19E-49 | -1.69E-46 |
| MS.gene053069 | MS.gene46027 | 0.82602 | 3.41E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene46027 | -0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene053403 | MS.gene46027 | 0.804727 | 1.88E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene46027 | 0.812588 | 3.93E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene46027 | 0.863682 | 2.09E-64 | -1.69E-46 |
| MS.gene053488 | MS.gene46027 | 0.871489 | 6.57E-67 | -1.69E-46 |
| MS.gene053561 | MS.gene46027 | 0.871752 | 5.38E-67 | -1.69E-46 |
| MS.gene053887 | MS.gene46027 | 0.818912 | 1.53E-52 | -1.69E-46 |
| MS.gene054054 | MS.gene46027 | 0.839503 | 1.52E-57 | -1.69E-46 |
| MS.gene054056 | MS.gene46027 | 0.859356 | 4.38E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene46027 | -0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene054616 | MS.gene46027 | 0.82186 | 3.23E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene46027 | 0.828909 | 6.92E-55 | -1.69E-46 |
| MS.gene054707 | MS.gene46027 | 0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene054708 | MS.gene46027 | 0.869032 | 4.19E-66 | -1.69E-46 |
| MS.gene054954 | MS.gene46027 | -0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene055124 | MS.gene46027 | 0.929687 | 4.86E-93 | -1.69E-46 |
| MS.gene055139 | MS.gene46027 | 0.827166 | 1.82E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene46027 | 0.881604 | 2.09E-70 | -1.69E-46 |
| MS.gene055202 | MS.gene46027 | 0.86809 | 8.45E-66 | -1.69E-46 |
| MS.gene055240 | MS.gene46027 | 0.810516 | 1.11E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene46027 | -0.817173 | 3.78E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene46027 | -0.822847 | 1.90E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene46027 | -0.803114 | 4.07E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene46027 | -0.826579 | 2.51E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene46027 | 0.834659 | 2.64E-56 | -1.69E-46 |
| MS.gene055959 | MS.gene46027 | 0.842915 | 1.93E-58 | -1.69E-46 |
| MS.gene056224 | MS.gene46027 | 0.845379 | 4.21E-59 | -1.69E-46 |
| MS.gene056310 | MS.gene46027 | 0.853336 | 2.56E-61 | -1.69E-46 |
| MS.gene056311 | MS.gene46027 | 0.850272 | 1.89E-60 | -1.69E-46 |
| MS.gene056313 | MS.gene46027 | 0.869338 | 3.34E-66 | -1.69E-46 |
| MS.gene056504 | MS.gene46027 | -0.842148 | 3.09E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene46027 | -0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene056748 | MS.gene46027 | 0.802252 | 6.13E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene46027 | 0.830552 | 2.75E-55 | -1.69E-46 |
| MS.gene057014 | MS.gene46027 | 0.84517 | 4.80E-59 | -1.69E-46 |
| MS.gene057086 | MS.gene46027 | -0.820708 | 5.95E-53 | -1.69E-46 |
| MS.gene057473 | MS.gene46027 | 0.823364 | 1.44E-53 | -1.69E-46 |
| MS.gene057549 | MS.gene46027 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene46027 | 0.848324 | 6.59E-60 | -1.69E-46 |
| MS.gene058093 | MS.gene46027 | 0.878168 | 3.49E-69 | -1.69E-46 |
| MS.gene058099 | MS.gene46027 | 0.891898 | 2.61E-74 | -1.69E-46 |
| MS.gene058108 | MS.gene46027 | 0.8782 | 3.40E-69 | -1.69E-46 |
| MS.gene058109 | MS.gene46027 | 0.88683 | 2.43E-72 | -1.69E-46 |
| MS.gene058111 | MS.gene46027 | 0.838619 | 2.58E-57 | -1.69E-46 |
| MS.gene058117 | MS.gene46027 | 0.825516 | 4.49E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene46027 | 0.911394 | 6.39E-83 | -1.69E-46 |
| MS.gene058173 | MS.gene46027 | 0.896496 | 3.49E-76 | -1.69E-46 |
| MS.gene058175 | MS.gene46027 | 0.906095 | 2.14E-80 | -1.69E-46 |
| MS.gene058179 | MS.gene46027 | 0.842307 | 2.80E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene46027 | 0.821881 | 3.19E-53 | -1.69E-46 |
| MS.gene058268 | MS.gene46027 | 0.838062 | 3.59E-57 | -1.69E-46 |
| MS.gene058269 | MS.gene46027 | 0.841391 | 4.89E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene46027 | -0.802471 | 5.52E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene46027 | -0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene058493 | MS.gene46027 | 0.827744 | 1.32E-54 | -1.69E-46 |
| MS.gene058494 | MS.gene46027 | 0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene46027 | 0.827812 | 1.27E-54 | -1.69E-46 |
| MS.gene058628 | MS.gene46027 | 0.818442 | 1.96E-52 | -1.69E-46 |
| MS.gene058629 | MS.gene46027 | 0.817031 | 4.07E-52 | -1.69E-46 |
| MS.gene058630 | MS.gene46027 | 0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene46027 | 0.876138 | 1.77E-68 | -1.69E-46 |
| MS.gene059022 | MS.gene46027 | -0.843119 | 1.70E-58 | -1.69E-46 |
| MS.gene059037 | MS.gene46027 | 0.868724 | 5.28E-66 | -1.69E-46 |
| MS.gene059038 | MS.gene46027 | 0.834647 | 2.66E-56 | -1.69E-46 |
| MS.gene059044 | MS.gene46027 | 0.816409 | 5.61E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene46027 | 0.886458 | 3.36E-72 | -1.69E-46 |
| MS.gene059223 | MS.gene46027 | 0.831145 | 1.97E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene46027 | -0.815 | 1.16E-51 | -1.69E-46 |
| MS.gene059682 | MS.gene46027 | 0.818058 | 2.39E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene46027 | 0.879712 | 9.96E-70 | -1.69E-46 |
| MS.gene059691 | MS.gene46027 | 0.867461 | 1.35E-65 | -1.69E-46 |
| MS.gene059694 | MS.gene46027 | 0.884747 | 1.47E-71 | -1.69E-46 |
| MS.gene059697 | MS.gene46027 | 0.888119 | 7.83E-73 | -1.69E-46 |
| MS.gene059865 | MS.gene46027 | -0.853802 | 1.88E-61 | -1.69E-46 |
| MS.gene059916 | MS.gene46027 | 0.859506 | 3.94E-63 | -1.69E-46 |
| MS.gene059943 | MS.gene46027 | 0.825797 | 3.85E-54 | -1.69E-46 |
| MS.gene059944 | MS.gene46027 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene059953 | MS.gene46027 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene46027 | 0.801417 | 9.09E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene46027 | -0.820292 | 7.41E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene46027 | 0.82441 | 8.19E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene46027 | -0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene46027 | -0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene46027 | -0.823639 | 1.24E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene46027 | -0.802381 | 5.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46027.t1 | MTR_7g065980 | 95.606 | 569 | 11 | 1 | 4 | 558 | 3 | 571 | 0.0 | 1121 |
| MS.gene46027.t1 | MTR_7g065970 | 62.738 | 577 | 189 | 6 | 1 | 558 | 1 | 570 | 0.0 | 704 |
| MS.gene46027.t1 | MTR_4g019225 | 54.737 | 570 | 230 | 10 | 10 | 558 | 10 | 572 | 0.0 | 627 |
| MS.gene46027.t1 | MTR_5g073210 | 45.567 | 564 | 270 | 9 | 15 | 558 | 14 | 560 | 5.24e-176 | 509 |
| MS.gene46027.t1 | MTR_5g083360 | 44.737 | 570 | 276 | 10 | 14 | 558 | 12 | 567 | 1.96e-175 | 508 |
| MS.gene46027.t1 | MTR_7g062250 | 44.542 | 568 | 283 | 10 | 13 | 558 | 21 | 578 | 5.16e-167 | 486 |
| MS.gene46027.t1 | MTR_5g020620 | 45.293 | 563 | 273 | 13 | 12 | 558 | 18 | 561 | 9.15e-167 | 485 |
| MS.gene46027.t1 | MTR_5g069680 | 43.380 | 574 | 290 | 10 | 1 | 558 | 4 | 558 | 2.11e-164 | 479 |
| MS.gene46027.t1 | MTR_7g058690 | 43.441 | 587 | 287 | 12 | 6 | 558 | 5 | 580 | 1.61e-163 | 478 |
| MS.gene46027.t1 | MTR_7g060460 | 43.178 | 579 | 292 | 11 | 8 | 558 | 12 | 581 | 2.64e-162 | 474 |
| MS.gene46027.t1 | MTR_4g015120 | 45.138 | 545 | 268 | 9 | 30 | 558 | 28 | 557 | 6.51e-162 | 473 |
| MS.gene46027.t1 | MTR_3g101635 | 46.403 | 556 | 267 | 10 | 13 | 548 | 12 | 556 | 8.00e-162 | 473 |
| MS.gene46027.t1 | MTR_2g008330 | 43.447 | 557 | 286 | 8 | 21 | 558 | 33 | 579 | 2.67e-161 | 472 |
| MS.gene46027.t1 | MTR_7g458880 | 42.832 | 565 | 290 | 10 | 18 | 558 | 25 | 580 | 5.34e-161 | 471 |
| MS.gene46027.t1 | MTR_3g101640 | 46.127 | 581 | 275 | 15 | 2 | 558 | 5 | 571 | 1.26e-159 | 468 |
| MS.gene46027.t1 | MTR_5g020600 | 43.950 | 562 | 281 | 12 | 14 | 558 | 22 | 566 | 1.15e-158 | 465 |
| MS.gene46027.t1 | MTR_4g064530 | 44.102 | 551 | 279 | 9 | 13 | 544 | 31 | 571 | 1.35e-158 | 465 |
| MS.gene46027.t1 | MTR_3g462760 | 43.670 | 545 | 273 | 11 | 30 | 558 | 30 | 556 | 8.20e-158 | 462 |
| MS.gene46027.t1 | MTR_7g062310 | 42.576 | 559 | 289 | 9 | 23 | 558 | 44 | 593 | 2.37e-155 | 457 |
| MS.gene46027.t1 | MTR_5g081810 | 44.853 | 544 | 264 | 13 | 31 | 558 | 6 | 529 | 5.56e-155 | 454 |
| MS.gene46027.t1 | MTR_3g071890 | 45.437 | 526 | 245 | 13 | 14 | 514 | 18 | 526 | 3.88e-153 | 451 |
| MS.gene46027.t1 | MTR_8g027375 | 40.893 | 582 | 305 | 11 | 1 | 558 | 5 | 571 | 6.28e-147 | 435 |
| MS.gene46027.t1 | MTR_4g064530 | 43.371 | 528 | 268 | 10 | 13 | 519 | 31 | 548 | 8.38e-146 | 431 |
| MS.gene46027.t1 | MTR_8g091390 | 29.616 | 547 | 318 | 16 | 41 | 549 | 49 | 566 | 1.45e-63 | 218 |
| MS.gene46027.t1 | MTR_3g078700 | 28.826 | 562 | 330 | 16 | 1 | 536 | 1 | 518 | 5.36e-55 | 194 |
| MS.gene46027.t1 | MTR_3g078740 | 28.811 | 597 | 334 | 23 | 1 | 536 | 1 | 567 | 3.36e-53 | 191 |
| MS.gene46027.t1 | MTR_5g081790 | 38.828 | 273 | 150 | 7 | 244 | 516 | 165 | 420 | 1.02e-52 | 186 |
| MS.gene46027.t1 | MTR_5g081790 | 46.835 | 158 | 75 | 3 | 12 | 160 | 9 | 166 | 1.42e-36 | 141 |
| MS.gene46027.t1 | MTR_3g078730 | 26.465 | 563 | 338 | 15 | 1 | 536 | 4 | 517 | 3.57e-45 | 167 |
| MS.gene46027.t1 | MTR_1g090707 | 26.072 | 583 | 341 | 19 | 13 | 558 | 7 | 536 | 2.62e-40 | 154 |
| MS.gene46027.t1 | MTR_8g479380 | 26.727 | 550 | 318 | 19 | 12 | 531 | 10 | 504 | 7.36e-36 | 141 |
| MS.gene46027.t1 | MTR_1g026410 | 28.884 | 502 | 292 | 20 | 40 | 523 | 43 | 497 | 8.51e-35 | 138 |
| MS.gene46027.t1 | MTR_3g115050 | 28.713 | 505 | 289 | 21 | 40 | 523 | 44 | 498 | 1.06e-34 | 138 |
| MS.gene46027.t1 | MTR_4g049390 | 26.411 | 496 | 302 | 17 | 40 | 518 | 41 | 490 | 2.88e-33 | 134 |
| MS.gene46027.t1 | MTR_8g479390 | 26.012 | 519 | 322 | 15 | 29 | 531 | 34 | 506 | 4.82e-33 | 133 |
| MS.gene46027.t1 | MTR_4g101650 | 28.147 | 572 | 349 | 20 | 12 | 558 | 15 | 549 | 5.11e-32 | 130 |
| MS.gene46027.t1 | MTR_4g075690 | 27.218 | 496 | 297 | 19 | 40 | 518 | 44 | 492 | 5.17e-32 | 130 |
| MS.gene46027.t1 | MTR_2g088080 | 25.775 | 516 | 302 | 15 | 29 | 518 | 33 | 493 | 2.14e-30 | 125 |
| MS.gene46027.t1 | MTR_4g048350 | 25.806 | 496 | 304 | 19 | 40 | 518 | 41 | 489 | 3.15e-30 | 125 |
| MS.gene46027.t1 | MTR_4g132320 | 26.181 | 508 | 288 | 19 | 40 | 518 | 45 | 494 | 7.78e-30 | 124 |
| MS.gene46027.t1 | MTR_3g008580 | 26.399 | 572 | 359 | 18 | 13 | 558 | 16 | 551 | 1.07e-29 | 124 |
| MS.gene46027.t1 | MTR_3g083430 | 26.208 | 538 | 323 | 18 | 29 | 540 | 28 | 517 | 3.42e-29 | 122 |
| MS.gene46027.t1 | MTR_8g073840 | 40.782 | 179 | 69 | 5 | 21 | 191 | 25 | 174 | 1.18e-28 | 116 |
| MS.gene46027.t1 | MTR_4g083210 | 26.248 | 541 | 338 | 17 | 11 | 531 | 5 | 504 | 1.70e-28 | 119 |
| MS.gene46027.t1 | MTR_3g083450 | 26.208 | 538 | 323 | 19 | 29 | 540 | 29 | 518 | 1.89e-28 | 119 |
| MS.gene46027.t1 | MTR_3g083400 | 26.022 | 538 | 324 | 18 | 29 | 540 | 28 | 517 | 3.43e-28 | 119 |
| MS.gene46027.t1 | MTR_4g083190 | 25.953 | 551 | 291 | 21 | 44 | 548 | 45 | 524 | 3.89e-28 | 119 |
| MS.gene46027.t1 | MTR_3g083440 | 25.836 | 538 | 325 | 18 | 29 | 540 | 28 | 517 | 4.44e-28 | 118 |
| MS.gene46027.t1 | MTR_5g018270 | 25.577 | 520 | 306 | 17 | 29 | 524 | 34 | 496 | 1.28e-27 | 117 |
| MS.gene46027.t1 | MTR_3g083390 | 25.836 | 538 | 325 | 18 | 29 | 540 | 28 | 517 | 1.29e-27 | 117 |
| MS.gene46027.t1 | MTR_3g083410 | 25.577 | 520 | 313 | 18 | 47 | 540 | 10 | 481 | 4.86e-27 | 115 |
| MS.gene46027.t1 | MTR_7g051440 | 26.857 | 525 | 322 | 17 | 32 | 532 | 35 | 521 | 6.52e-26 | 112 |
| MS.gene46027.t1 | MTR_4g075690 | 26.444 | 450 | 268 | 18 | 40 | 472 | 44 | 447 | 1.03e-23 | 104 |
| MS.gene46027.t1 | MTR_2g088080 | 24.625 | 467 | 271 | 15 | 78 | 518 | 1 | 412 | 5.41e-22 | 99.4 |
| MS.gene46027.t1 | MTR_7g058670 | 46.753 | 77 | 39 | 2 | 83 | 157 | 13 | 89 | 6.00e-18 | 79.7 |
| MS.gene46027.t1 | MTR_6g055200 | 63.043 | 46 | 16 | 1 | 466 | 511 | 1 | 45 | 4.58e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46027.t1 | AT5G01050 | 53.559 | 562 | 239 | 8 | 12 | 558 | 14 | 568 | 0.0 | 607 |
| MS.gene46027.t1 | AT5G01040 | 52.594 | 559 | 247 | 6 | 12 | 558 | 14 | 566 | 0.0 | 606 |
| MS.gene46027.t1 | AT3G09220 | 53.370 | 549 | 229 | 9 | 11 | 541 | 11 | 550 | 0.0 | 583 |
| MS.gene46027.t1 | AT5G05390 | 45.150 | 567 | 277 | 10 | 12 | 558 | 13 | 565 | 5.20e-173 | 501 |
| MS.gene46027.t1 | AT2G40370 | 42.833 | 586 | 296 | 10 | 2 | 558 | 5 | 580 | 1.03e-172 | 501 |
| MS.gene46027.t1 | AT2G30210 | 44.718 | 568 | 270 | 12 | 18 | 558 | 20 | 570 | 7.00e-171 | 496 |
| MS.gene46027.t1 | AT5G07130 | 44.138 | 580 | 282 | 12 | 8 | 558 | 3 | 569 | 9.19e-169 | 491 |
| MS.gene46027.t1 | AT2G29130 | 43.966 | 580 | 286 | 12 | 9 | 558 | 3 | 573 | 5.34e-166 | 484 |
| MS.gene46027.t1 | AT3G09220 | 53.362 | 461 | 188 | 9 | 99 | 541 | 2 | 453 | 4.51e-165 | 478 |
| MS.gene46027.t1 | AT5G03260 | 46.029 | 554 | 264 | 14 | 22 | 558 | 22 | 557 | 1.12e-161 | 472 |
| MS.gene46027.t1 | AT5G60020 | 43.101 | 587 | 295 | 12 | 1 | 558 | 1 | 577 | 1.44e-160 | 470 |
| MS.gene46027.t1 | AT5G60020 | 44.485 | 553 | 269 | 11 | 35 | 558 | 2 | 545 | 9.30e-160 | 467 |
| MS.gene46027.t1 | AT2G38080 | 42.882 | 569 | 288 | 13 | 10 | 558 | 7 | 558 | 3.14e-159 | 466 |
| MS.gene46027.t1 | AT5G58910 | 44.030 | 536 | 273 | 9 | 39 | 558 | 43 | 567 | 5.81e-158 | 463 |
| MS.gene46027.t1 | AT5G58910 | 44.030 | 536 | 273 | 9 | 39 | 558 | 42 | 566 | 6.00e-158 | 463 |
| MS.gene46027.t1 | AT5G09360 | 41.873 | 566 | 293 | 10 | 12 | 558 | 21 | 569 | 6.17e-157 | 461 |
| MS.gene46027.t1 | AT5G01190 | 43.554 | 574 | 288 | 9 | 1 | 558 | 5 | 558 | 3.47e-156 | 458 |
| MS.gene46027.t1 | AT1G18140 | 43.728 | 574 | 272 | 13 | 21 | 558 | 23 | 581 | 1.22e-155 | 457 |
| MS.gene46027.t1 | AT5G58910 | 43.470 | 536 | 269 | 10 | 39 | 558 | 6 | 523 | 5.86e-153 | 449 |
| MS.gene46027.t1 | AT5G01190 | 44.612 | 529 | 262 | 8 | 46 | 558 | 31 | 544 | 1.07e-149 | 441 |
| MS.gene46027.t1 | AT2G46570 | 42.986 | 556 | 284 | 10 | 22 | 558 | 28 | 569 | 6.20e-149 | 440 |
| MS.gene46027.t1 | AT5G48100 | 43.094 | 543 | 272 | 13 | 29 | 548 | 25 | 553 | 9.36e-143 | 424 |
| MS.gene46027.t1 | AT5G60020 | 42.018 | 545 | 277 | 12 | 1 | 516 | 1 | 535 | 2.05e-139 | 415 |
| MS.gene46027.t1 | AT5G07130 | 43.863 | 497 | 240 | 11 | 88 | 558 | 1 | 484 | 2.06e-139 | 412 |
| MS.gene46027.t1 | AT5G07130 | 43.863 | 497 | 240 | 11 | 88 | 558 | 1 | 484 | 2.06e-139 | 412 |
| MS.gene46027.t1 | AT2G46570 | 42.626 | 495 | 251 | 10 | 83 | 558 | 4 | 484 | 1.10e-127 | 382 |
| MS.gene46027.t1 | AT4G39830 | 28.836 | 593 | 337 | 19 | 13 | 558 | 23 | 577 | 5.60e-63 | 217 |
| MS.gene46027.t1 | AT5G21105 | 29.762 | 588 | 332 | 21 | 10 | 549 | 20 | 574 | 1.06e-60 | 211 |
| MS.gene46027.t1 | AT5G21100 | 28.853 | 558 | 322 | 18 | 21 | 537 | 19 | 542 | 1.42e-60 | 210 |
| MS.gene46027.t1 | AT5G21105 | 29.348 | 552 | 312 | 20 | 10 | 516 | 20 | 538 | 2.07e-52 | 187 |
| MS.gene46027.t1 | AT4G39830 | 28.846 | 520 | 286 | 18 | 85 | 558 | 1 | 482 | 1.90e-47 | 172 |
| MS.gene46027.t1 | AT4G39830 | 28.850 | 513 | 281 | 18 | 92 | 558 | 6 | 480 | 6.83e-46 | 168 |
| MS.gene46027.t1 | AT4G39830 | 28.324 | 519 | 277 | 17 | 85 | 558 | 1 | 469 | 2.29e-44 | 164 |
| MS.gene46027.t1 | AT1G41830 | 27.736 | 530 | 312 | 19 | 16 | 523 | 16 | 496 | 6.38e-36 | 141 |
| MS.gene46027.t1 | AT4G37160 | 27.239 | 547 | 335 | 16 | 29 | 558 | 34 | 534 | 2.12e-35 | 140 |
| MS.gene46027.t1 | AT1G76160 | 26.916 | 561 | 340 | 19 | 9 | 548 | 6 | 517 | 5.68e-35 | 139 |
| MS.gene46027.t1 | AT5G66920 | 26.715 | 554 | 327 | 18 | 29 | 558 | 40 | 538 | 2.37e-34 | 137 |
| MS.gene46027.t1 | AT5G21105 | 30.769 | 364 | 212 | 12 | 195 | 549 | 51 | 383 | 3.22e-34 | 134 |
| MS.gene46027.t1 | AT5G48450 | 26.654 | 514 | 313 | 18 | 40 | 532 | 43 | 513 | 4.48e-34 | 136 |
| MS.gene46027.t1 | AT5G48450 | 26.654 | 514 | 313 | 18 | 40 | 532 | 43 | 513 | 9.10e-34 | 136 |
| MS.gene46027.t1 | AT2G23630 | 26.740 | 546 | 338 | 19 | 29 | 558 | 33 | 532 | 1.30e-33 | 135 |
| MS.gene46027.t1 | AT5G51480 | 26.736 | 576 | 350 | 18 | 14 | 558 | 16 | 550 | 1.53e-33 | 135 |
| MS.gene46027.t1 | AT2G23630 | 26.740 | 546 | 338 | 19 | 29 | 558 | 38 | 537 | 1.88e-33 | 134 |
| MS.gene46027.t1 | AT1G21850 | 27.757 | 544 | 295 | 20 | 37 | 548 | 40 | 517 | 8.24e-33 | 132 |
| MS.gene46027.t1 | AT1G75790 | 26.633 | 597 | 332 | 25 | 1 | 558 | 12 | 541 | 1.15e-32 | 132 |
| MS.gene46027.t1 | AT1G21860 | 26.204 | 519 | 304 | 21 | 37 | 531 | 40 | 503 | 2.36e-32 | 131 |
| MS.gene46027.t1 | AT4G22010 | 26.032 | 557 | 330 | 18 | 29 | 558 | 29 | 530 | 7.68e-32 | 129 |
| MS.gene46027.t1 | AT4G25240 | 27.003 | 574 | 356 | 17 | 11 | 558 | 14 | 550 | 2.98e-31 | 128 |
| MS.gene46027.t1 | AT4G25240 | 27.003 | 574 | 356 | 17 | 11 | 558 | 14 | 550 | 2.98e-31 | 128 |
| MS.gene46027.t1 | AT4G12420 | 26.112 | 517 | 326 | 17 | 30 | 523 | 29 | 512 | 4.15e-31 | 128 |
| MS.gene46027.t1 | AT4G12420 | 26.112 | 517 | 326 | 17 | 30 | 523 | 29 | 512 | 4.15e-31 | 128 |
| MS.gene46027.t1 | AT1G55570 | 27.668 | 506 | 283 | 17 | 44 | 518 | 47 | 500 | 4.41e-30 | 124 |
| MS.gene46027.t1 | AT4G28090 | 24.851 | 503 | 300 | 18 | 47 | 523 | 49 | 499 | 9.95e-28 | 117 |
| MS.gene46027.t1 | AT4G37160 | 28.018 | 439 | 257 | 14 | 29 | 450 | 34 | 430 | 4.54e-27 | 114 |
| MS.gene46027.t1 | AT3G13390 | 25.475 | 526 | 311 | 16 | 36 | 531 | 38 | 512 | 7.42e-27 | 115 |
| MS.gene46027.t1 | AT4G38420 | 24.950 | 497 | 314 | 16 | 44 | 522 | 48 | 503 | 9.16e-26 | 111 |
| MS.gene46027.t1 | AT3G13400 | 26.305 | 498 | 299 | 18 | 44 | 518 | 45 | 497 | 1.44e-24 | 108 |
| MS.gene46027.t1 | AT3G13400 | 26.305 | 498 | 299 | 18 | 44 | 518 | 45 | 497 | 1.44e-24 | 108 |
| MS.gene46027.t1 | AT1G55560 | 25.845 | 503 | 295 | 21 | 44 | 518 | 44 | 496 | 7.27e-23 | 102 |
| MS.gene46027.t1 | AT4G38420 | 24.528 | 477 | 301 | 16 | 44 | 502 | 48 | 483 | 4.14e-22 | 100 |
| MS.gene46027.t1 | AT4G38420 | 28.287 | 251 | 154 | 6 | 44 | 277 | 48 | 289 | 3.88e-20 | 94.0 |
Find 118 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTCAATATGAAGATTT+TGG | 0.185047 | 7.2:+43247816 | None:intergenic |
| CAAGTGATTGTTACAGTTAA+TGG | 0.188106 | 7.2:+43248544 | MS.gene46027:CDS |
| TACAGTTGAACGCACTTTCT+TGG | 0.249775 | 7.2:+43247897 | MS.gene46027:CDS |
| ACAGCTTTCATAGTTGAAAA+TGG | 0.257214 | 7.2:+43250845 | MS.gene46027:CDS |
| CCTGTACATTTAGCATTTAC+AGG | 0.258852 | 7.2:-43250180 | None:intergenic |
| AGTGGGACAGGGACCCAATT+TGG | 0.259460 | 7.2:-43250105 | None:intergenic |
| CGATAAACTCAAGTATAATT+TGG | 0.260597 | 7.2:+43250557 | MS.gene46027:CDS |
| TATGTATATCACAATTAATA+TGG | 0.286408 | 7.2:+43250143 | MS.gene46027:CDS |
| TTCACAATCAACGGCTTTCC+TGG | 0.287844 | 7.2:+43249536 | MS.gene46027:CDS |
| GGACATTGTGTTATATATTC+AGG | 0.298929 | 7.2:-43249257 | None:intergenic |
| TGCTTCACCTTAGTCGATTT+CGG | 0.324244 | 7.2:-43250399 | None:intergenic |
| GGTACTTCCTTGTAGGGTTT+AGG | 0.325375 | 7.2:-43249425 | None:intergenic |
| TATTATTGGTACTTCCTTGT+AGG | 0.335846 | 7.2:-43249432 | None:intergenic |
| GCAACATAACTGGTCTTGTT+GGG | 0.336713 | 7.2:+43250079 | MS.gene46027:CDS |
| TATATAGCCAATTAACATTT+AGG | 0.338710 | 7.2:-43250911 | None:intergenic |
| TTGCTGTGCCGGTGGGAGGA+TGG | 0.341412 | 7.2:+43250604 | MS.gene46027:CDS |
| CCAGTGAATTGTTATATTGT+AGG | 0.350520 | 7.2:-43248638 | None:intergenic |
| CAAATTATACTTGAGTTTAT+CGG | 0.350950 | 7.2:-43250556 | None:intergenic |
| CTGTAACAATCACTTGTTCA+TGG | 0.365502 | 7.2:-43248537 | None:intergenic |
| TGCTGTGCCGGTGGGAGGAT+GGG | 0.368851 | 7.2:+43250605 | MS.gene46027:CDS |
| TCCTTGTAGGGTTTAGGAAA+TGG | 0.378132 | 7.2:-43249419 | None:intergenic |
| CCATCCCTGACTTCCAGCTT+TGG | 0.378346 | 7.2:-43248580 | None:intergenic |
| TTCGGTGTAAATGTAACATT+AGG | 0.379226 | 7.2:-43250381 | None:intergenic |
| ATGTGGATGATCATAATCTA+TGG | 0.380123 | 7.2:+43250813 | MS.gene46027:CDS |
| ACGATTATATCGGTGGTATA+AGG | 0.384708 | 7.2:-43249820 | None:intergenic |
| ATTATTGGTACTTCCTTGTA+GGG | 0.396984 | 7.2:-43249431 | None:intergenic |
| CAGGTCCAAAGCTGGAAGTC+AGG | 0.405362 | 7.2:+43248575 | MS.gene46027:CDS |
| TCGCAACACGGTTGCTGTGC+CGG | 0.420527 | 7.2:+43250593 | MS.gene46027:CDS |
| CTGACTTCCAGCTTTGGACC+TGG | 0.430307 | 7.2:-43248574 | None:intergenic |
| CACAACAAGAAGGAACATTA+TGG | 0.433064 | 7.2:+43249321 | MS.gene46027:CDS |
| GGAACGAGGTTGAATGATAA+TGG | 0.439666 | 7.2:-43249387 | None:intergenic |
| CAGTGAATTGTTATATTGTA+GGG | 0.446742 | 7.2:-43248637 | None:intergenic |
| ATGTATATCACAATTAATAT+GGG | 0.450105 | 7.2:+43250144 | MS.gene46027:CDS |
| CGAGTGCAGCGTTGACCATT+CGG | 0.452418 | 7.2:-43249726 | None:intergenic |
| AGTCATCCCATGCATCTTCA+TGG | 0.452974 | 7.2:+43250483 | MS.gene46027:CDS |
| ACATACCAGGATTGTCAGTT+CGG | 0.465483 | 7.2:-43250641 | None:intergenic |
| GCAACCGTGTTGCGAATTGA+AGG | 0.469608 | 7.2:-43250585 | None:intergenic |
| TGAAAAGTATATCGGCGCTT+TGG | 0.470293 | 7.2:-43249855 | None:intergenic |
| CCTGTAAATGCTAAATGTAC+AGG | 0.471155 | 7.2:+43250180 | MS.gene46027:CDS |
| TACTTGAGTTTATCGGTAGT+AGG | 0.471637 | 7.2:-43250549 | None:intergenic |
| GCTGCATCACCTTATGTTGT+TGG | 0.473113 | 7.2:+43249910 | MS.gene46027:CDS |
| CCAACACCTTCAACTTCACT+TGG | 0.476302 | 7.2:+43250869 | MS.gene46027:CDS |
| GTTGACCATTCGGAACAAAT+AGG | 0.478262 | 7.2:-43249716 | None:intergenic |
| AGCAACATAACTGGTCTTGT+TGG | 0.480683 | 7.2:+43250078 | MS.gene46027:CDS |
| AAAGACGACGGCACGAGTTG+TGG | 0.481369 | 7.2:-43249959 | None:intergenic |
| CTCGGTGTATGCGGCATCCA+TGG | 0.481870 | 7.2:-43249797 | None:intergenic |
| GTCTGCTGTGAAAAGTATAT+CGG | 0.483139 | 7.2:-43249863 | None:intergenic |
| TGACTTCCAGCTTTGGACCT+GGG | 0.483976 | 7.2:-43248573 | None:intergenic |
| AAGTATATCGGCGCTTTGGC+CGG | 0.485011 | 7.2:-43249851 | None:intergenic |
| CTGACCATGCACTATATAGC+TGG | 0.486876 | 7.2:-43249229 | None:intergenic |
| TGGAAAAGGATATTCCATAA+TGG | 0.491498 | 7.2:+43250260 | MS.gene46027:CDS |
| ATTTACACCGAAATCGACTA+AGG | 0.491745 | 7.2:+43250392 | MS.gene46027:CDS |
| TCCATTTCCTAAACCCTACA+AGG | 0.509307 | 7.2:+43249418 | MS.gene46027:CDS |
| ACTGGTTCACCAACAACATA+AGG | 0.513560 | 7.2:-43249919 | None:intergenic |
| TCATCCACTTCAAGTGGGAC+AGG | 0.515815 | 7.2:-43250117 | None:intergenic |
| TGTGGATGATCATAATCTAT+GGG | 0.516377 | 7.2:+43250814 | MS.gene46027:CDS |
| GATATAATCGTCATCGCAGC+CGG | 0.517961 | 7.2:+43249832 | MS.gene46027:CDS |
| GAACAATTGAAGAGATCGCC+AGG | 0.518140 | 7.2:-43249554 | None:intergenic |
| GTTGTACGTGCAACAGTTCA+CGG | 0.522175 | 7.2:+43249362 | MS.gene46027:CDS |
| CATTTAGCATTTACAGGACA+AGG | 0.523265 | 7.2:-43250174 | None:intergenic |
| CAACATAACTGGTCTTGTTG+GGG | 0.524379 | 7.2:+43250080 | MS.gene46027:CDS |
| CAACACGGTTGCTGTGCCGG+TGG | 0.525329 | 7.2:+43250596 | MS.gene46027:CDS |
| ACTTTACCCAGGTCCAAAGC+TGG | 0.536979 | 7.2:+43248567 | MS.gene46027:CDS |
| TTCATACCATGAAGATGCAT+GGG | 0.538306 | 7.2:-43250489 | None:intergenic |
| ATTCATACCATGAAGATGCA+TGG | 0.538422 | 7.2:-43250490 | None:intergenic |
| AGTGGTAATGCTGGCATCAA+AGG | 0.541191 | 7.2:-43250021 | None:intergenic |
| ATTATCATTCAACCTCGTTC+CGG | 0.545898 | 7.2:+43249389 | MS.gene46027:CDS |
| TTCACAGCAGACCAACCAAA+GGG | 0.547414 | 7.2:+43249874 | MS.gene46027:CDS |
| CTATATAGTGCATGGTCAGA+TGG | 0.547803 | 7.2:+43249233 | MS.gene46027:CDS |
| CAAATTCACAGTTGTAGCCA+TGG | 0.551620 | 7.2:+43249780 | MS.gene46027:CDS |
| CAAATACAATTCAACGGTGG+AGG | 0.551874 | 7.2:+43250425 | MS.gene46027:CDS |
| TAACATTTAGGCAAATCAGC+AGG | 0.558427 | 7.2:-43250899 | None:intergenic |
| GAATTGTCGAAGAGTCCTAC+TGG | 0.559246 | 7.2:-43249937 | None:intergenic |
| AGATTCCGAACTGACAATCC+TGG | 0.559455 | 7.2:+43250636 | MS.gene46027:CDS |
| TTAGGCAAATCAGCAGGTGG+TGG | 0.560545 | 7.2:-43250893 | None:intergenic |
| GGTCCCTGTCCCACTTGAAG+TGG | 0.563821 | 7.2:+43250113 | MS.gene46027:CDS |
| TCTGATGCTTTCACAATCAA+CGG | 0.564541 | 7.2:+43249527 | MS.gene46027:CDS |
| AGGTCCAAAGCTGGAAGTCA+GGG | 0.569821 | 7.2:+43248576 | MS.gene46027:CDS |
| ACCAAAGGGTTCATATTACA+TGG | 0.572003 | 7.2:+43249888 | MS.gene46027:CDS |
| TTGTTATGAAGTGGTAATGC+TGG | 0.573382 | 7.2:-43250030 | None:intergenic |
| AACACGGTTGCTGTGCCGGT+GGG | 0.573459 | 7.2:+43250597 | MS.gene46027:CDS |
| CCTACAATATAACAATTCAC+TGG | 0.574181 | 7.2:+43248638 | MS.gene46027:CDS |
| GGCTGCGATGACGATTATAT+CGG | 0.574707 | 7.2:-43249830 | None:intergenic |
| AAAGACCTATTTGTTCCGAA+TGG | 0.575759 | 7.2:+43249711 | MS.gene46027:CDS |
| GCTAAATGTACAGGTCCACT+TGG | 0.578008 | 7.2:+43250189 | MS.gene46027:CDS |
| TTTAGGAAATGGAAATCGAC+CGG | 0.579716 | 7.2:-43249408 | None:intergenic |
| GCCATGTAATATGAACCCTT+TGG | 0.582550 | 7.2:-43249889 | None:intergenic |
| TGTAATATGAACCCTTTGGT+TGG | 0.585254 | 7.2:-43249885 | None:intergenic |
| ACGGTTGCTGTGCCGGTGGG+AGG | 0.595198 | 7.2:+43250600 | MS.gene46027:CDS |
| TTTAATGTGACACAACAAGA+AGG | 0.597981 | 7.2:+43249311 | MS.gene46027:CDS |
| GAATCCTTCAATTCGCAACA+CGG | 0.600436 | 7.2:+43250581 | MS.gene46027:CDS |
| ATAGCAGCCCATCCTCCCAC+CGG | 0.601570 | 7.2:-43250612 | None:intergenic |
| TTTGGTGTTATGGCAAACAT+GGG | 0.609087 | 7.2:+43247834 | MS.gene46027:CDS |
| CATCCACTTCAAGTGGGACA+GGG | 0.612302 | 7.2:-43250116 | None:intergenic |
| GCAATTCAAATACAATTCAA+CGG | 0.613563 | 7.2:+43250419 | MS.gene46027:CDS |
| CCAAGTGAAGTTGAAGGTGT+TGG | 0.618280 | 7.2:-43250869 | None:intergenic |
| TATGTTGTTGGTGAACCAGT+AGG | 0.621180 | 7.2:+43249922 | MS.gene46027:CDS |
| ATATGTTCATCCACTTCAAG+TGG | 0.622032 | 7.2:-43250123 | None:intergenic |
| GGTATAAGGCTCGGTGTATG+CGG | 0.622760 | 7.2:-43249806 | None:intergenic |
| TTTCACAGCAGACCAACCAA+AGG | 0.627069 | 7.2:+43249873 | MS.gene46027:CDS |
| ACAGTTAATGGACTTTACCC+AGG | 0.628423 | 7.2:+43248556 | MS.gene46027:CDS |
| TATATCGGTGGTATAAGGCT+CGG | 0.628540 | 7.2:-43249815 | None:intergenic |
| TGTTCCAGCTATATAGTGCA+TGG | 0.629241 | 7.2:+43249225 | MS.gene46027:CDS |
| TGCGATGACGATTATATCGG+TGG | 0.631020 | 7.2:-43249827 | None:intergenic |
| ATTGGTGTATTGTTATGAAG+TGG | 0.638592 | 7.2:-43250039 | None:intergenic |
| TATAAGCTGAAAGTGAAGCA+AGG | 0.638942 | 7.2:+43249688 | MS.gene46027:CDS |
| AATGGAAATCGACCGGAACG+AGG | 0.643895 | 7.2:-43249401 | None:intergenic |
| TACAACTGTGAATTTGTGAT+CGG | 0.646281 | 7.2:-43249773 | None:intergenic |
| CCAAAGCTGGAAGTCAGGGA+TGG | 0.647318 | 7.2:+43248580 | MS.gene46027:CDS |
| GGTGGACCAAGTGAAGTTGA+AGG | 0.647739 | 7.2:-43250875 | None:intergenic |
| CATTTAGGCAAATCAGCAGG+TGG | 0.649176 | 7.2:-43250896 | None:intergenic |
| AACATAACTGGTCTTGTTGG+GGG | 0.650365 | 7.2:+43250081 | MS.gene46027:CDS |
| TATGTTCATCCACTTCAAGT+GGG | 0.681147 | 7.2:-43250122 | None:intergenic |
| TTGATTGTGAAAGCATCAGA+CGG | 0.681899 | 7.2:-43249524 | None:intergenic |
| GTGGATGATCATAATCTATG+GGG | 0.686953 | 7.2:+43250815 | MS.gene46027:CDS |
| AACAAGAAGGAACATTATGG+TGG | 0.690252 | 7.2:+43249324 | MS.gene46027:CDS |
| GTAACCCTCGTAAAAGACGA+CGG | 0.705472 | 7.2:-43249971 | None:intergenic |
| ATTCAAATACAATTCAACGG+TGG | 0.707341 | 7.2:+43250422 | MS.gene46027:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTATATCACAATTAATAT+GGG | + | chr7.2:43250144-43250163 | MS.gene46027:CDS | 15.0% |
| !! | TATGTATATCACAATTAATA+TGG | + | chr7.2:43250143-43250162 | MS.gene46027:CDS | 15.0% |
| !!! | AATTTCTTGATTGTTTATTT+TGG | + | chr7.2:43250766-43250785 | MS.gene46027:intron | 15.0% |
| !!! | ACATTATTTTTAACTTTCTT+TGG | + | chr7.2:43248813-43248832 | MS.gene46027:intron | 15.0% |
| !!! | GATAATCTTTTTAGAATAAT+CGG | - | chr7.2:43248222-43248241 | None:intergenic | 15.0% |
| !!! | GATTTCATAATATTTTCTTT+TGG | + | chr7.2:43248385-43248404 | MS.gene46027:intron | 15.0% |
| !!! | TCTAATTTTATCTTCATTTA+TGG | + | chr7.2:43247864-43247883 | MS.gene46027:CDS | 15.0% |
| !!! | TTGTATGTAAATTTATTTTC+AGG | - | chr7.2:43249290-43249309 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTGCCAAATT+TGG | + | chr7.2:43248735-43248754 | MS.gene46027:intron | 15.0% |
| !! | AAAAAAAAAATGCCTTCAAT+TGG | - | chr7.2:43248721-43248740 | None:intergenic | 20.0% |
| !! | ATAAAATACTTATACATACC+AGG | - | chr7.2:43250657-43250676 | None:intergenic | 20.0% |
| !! | ATGATTGCAATTAGTTATAT+TGG | - | chr7.2:43248022-43248041 | None:intergenic | 20.0% |
| !! | ATGTATCTATTCTAATACTT+GGG | - | chr7.2:43249035-43249054 | None:intergenic | 20.0% |
| !! | ATTATCAAAAGTCTATAGAA+AGG | + | chr7.2:43248236-43248255 | MS.gene46027:intron | 20.0% |
| !! | CAAATTATACTTGAGTTTAT+CGG | - | chr7.2:43250559-43250578 | None:intergenic | 20.0% |
| !! | TGATTGCAATTAGTTATATT+GGG | - | chr7.2:43248021-43248040 | None:intergenic | 20.0% |
| !! | TTACAACTTAATGAAATAGT+TGG | - | chr7.2:43249060-43249079 | None:intergenic | 20.0% |
| !!! | AAAATCGTATGTTTCTATTT+CGG | + | chr7.2:43249579-43249598 | MS.gene46027:intron | 20.0% |
| !!! | AAATTTTTTAGCAACATAAC+TGG | + | chr7.2:43250069-43250088 | MS.gene46027:CDS | 20.0% |
| !!! | ATTGTCTTCTAATGTTTTTT+TGG | + | chr7.2:43248421-43248440 | MS.gene46027:intron | 20.0% |
| !!! | TGAATTTTTGAACTATGTAA+AGG | + | chr7.2:43249195-43249214 | MS.gene46027:intron | 20.0% |
| !!! | TTAGGATCCAAAAATATTTT+CGG | - | chr7.2:43250366-43250385 | None:intergenic | 20.0% |
| !!! | TTATTTTTAACTTTCTTTGG+TGG | + | chr7.2:43248816-43248835 | MS.gene46027:intron | 20.0% |
| ! | AAAAATAATGTCTCATCTCA+TGG | - | chr7.2:43248804-43248823 | None:intergenic | 25.0% |
| ! | ATTGAAATTGAATGAATTGC+AGG | + | chr7.2:43248486-43248505 | MS.gene46027:intron | 25.0% |
| ! | CAGTGAATTGTTATATTGTA+GGG | - | chr7.2:43248640-43248659 | None:intergenic | 25.0% |
| ! | CATGTATCTATTCTAATACT+TGG | - | chr7.2:43249036-43249055 | None:intergenic | 25.0% |
| ! | CGATAAACTCAAGTATAATT+TGG | + | chr7.2:43250557-43250576 | MS.gene46027:CDS | 25.0% |
| ! | CTAAAAAATTTGTGAGCTAT+TGG | - | chr7.2:43250060-43250079 | None:intergenic | 25.0% |
| ! | GCAATTCAAATACAATTCAA+CGG | + | chr7.2:43250419-43250438 | MS.gene46027:CDS | 25.0% |
| ! | GTAAAAATATGCTTCCATTA+TGG | - | chr7.2:43250277-43250296 | None:intergenic | 25.0% |
| ! | TTATATATGAGTTCTTTCTC+TGG | - | chr7.2:43249110-43249129 | None:intergenic | 25.0% |
| !! | CATTAGAAGACAATTTTACT+TGG | - | chr7.2:43248415-43248434 | None:intergenic | 25.0% |
| !! | TAGGATCCAAAAATATTTTC+GGG | - | chr7.2:43250365-43250384 | None:intergenic | 25.0% |
| !! | TGGTATGAATTTTCATGTTT+TGG | + | chr7.2:43250503-43250522 | MS.gene46027:CDS | 25.0% |
| !! | TTTACGAAGTCGAAAATTTT+TGG | - | chr7.2:43250342-43250361 | None:intergenic | 25.0% |
| !!! | AATTTATTTTCAGGACGAAT+TGG | - | chr7.2:43249281-43249300 | None:intergenic | 25.0% |
| !!! | GACTAATTAAATTCGCTTTT+TGG | - | chr7.2:43248967-43248986 | None:intergenic | 25.0% |
| AACCCTGATCATTTACTATT+TGG | - | chr7.2:43248193-43248212 | None:intergenic | 30.0% | |
| ACAGCTTTCATAGTTGAAAA+TGG | + | chr7.2:43250845-43250864 | MS.gene46027:CDS | 30.0% | |
| AGACATCGTATTATATATGC+AGG | - | chr7.2:43248898-43248917 | None:intergenic | 30.0% | |
| ATGTGGATGATCATAATCTA+TGG | + | chr7.2:43250813-43250832 | MS.gene46027:CDS | 30.0% | |
| ATTATTGGTACTTCCTTGTA+GGG | - | chr7.2:43249434-43249453 | None:intergenic | 30.0% | |
| ATTCAAATACAATTCAACGG+TGG | + | chr7.2:43250422-43250441 | MS.gene46027:CDS | 30.0% | |
| ATTGGTGTATTGTTATGAAG+TGG | - | chr7.2:43250042-43250061 | None:intergenic | 30.0% | |
| CAAGTGATTGTTACAGTTAA+TGG | + | chr7.2:43248544-43248563 | MS.gene46027:CDS | 30.0% | |
| CCAGTGAATTGTTATATTGT+AGG | - | chr7.2:43248641-43248660 | None:intergenic | 30.0% | |
| CCTACAATATAACAATTCAC+TGG | + | chr7.2:43248638-43248657 | MS.gene46027:CDS | 30.0% | |
| CTAATTGCAATCATTTCTCA+CGG | + | chr7.2:43248028-43248047 | MS.gene46027:intron | 30.0% | |
| GACATCGTATTATATATGCA+GGG | - | chr7.2:43248897-43248916 | None:intergenic | 30.0% | |
| GGACATTGTGTTATATATTC+AGG | - | chr7.2:43249260-43249279 | None:intergenic | 30.0% | |
| GTCCAAATAGTAAATGATCA+GGG | + | chr7.2:43248188-43248207 | MS.gene46027:intron | 30.0% | |
| TACAACTGTGAATTTGTGAT+CGG | - | chr7.2:43249776-43249795 | None:intergenic | 30.0% | |
| TACCAATAATACTAGGTGAT+TGG | + | chr7.2:43249444-43249463 | MS.gene46027:intron | 30.0% | |
| TACCAATCACCTAGTATTAT+TGG | - | chr7.2:43249449-43249468 | None:intergenic | 30.0% | |
| TATTATGAAATCCACGTGTT+AGG | - | chr7.2:43248377-43248396 | None:intergenic | 30.0% | |
| TATTATTGGTACTTCCTTGT+AGG | - | chr7.2:43249435-43249454 | None:intergenic | 30.0% | |
| TGGAAAAGGATATTCCATAA+TGG | + | chr7.2:43250260-43250279 | MS.gene46027:CDS | 30.0% | |
| TGTGGATGATCATAATCTAT+GGG | + | chr7.2:43250814-43250833 | MS.gene46027:CDS | 30.0% | |
| TTTAATGTGACACAACAAGA+AGG | + | chr7.2:43249311-43249330 | MS.gene46027:CDS | 30.0% | |
| ! | CGTAAACCCGAAAATATTTT+TGG | + | chr7.2:43250356-43250375 | MS.gene46027:CDS | 30.0% |
| ! | CTCTGACATAAATTTTTGCA+AGG | + | chr7.2:43248059-43248078 | MS.gene46027:intron | 30.0% |
| ! | GACATAAATTTTTGCAAGGT+CGG | + | chr7.2:43248063-43248082 | MS.gene46027:intron | 30.0% |
| ! | TTCGGTGTAAATGTAACATT+AGG | - | chr7.2:43250384-43250403 | None:intergenic | 30.0% |
| ! | TTTCCTTTATCTTTTTGCGA+AGG | + | chr7.2:43248289-43248308 | MS.gene46027:intron | 30.0% |
| ! | TTTTGAACTATGTAAAGGCA+TGG | + | chr7.2:43249200-43249219 | MS.gene46027:intron | 30.0% |
| !! | AAAATTTTTGGAGGGTTATC+TGG | - | chr7.2:43250330-43250349 | None:intergenic | 30.0% |
| !! | AAGGAAGTACCAATAATACT+AGG | + | chr7.2:43249437-43249456 | MS.gene46027:intron | 30.0% |
| !! | GCATATTTTTACAATGTGAG+TGG | + | chr7.2:43250285-43250304 | MS.gene46027:CDS | 30.0% |
| !!! | CTTGATTGTTTATTTTGGCA+GGG | + | chr7.2:43250771-43250790 | MS.gene46027:intron | 30.0% |
| !!! | TCTTGATTGTTTATTTTGGC+AGG | + | chr7.2:43250770-43250789 | MS.gene46027:intron | 30.0% |
| !!! | TTGATTGTTTATTTTGGCAG+GGG | + | chr7.2:43250772-43250791 | MS.gene46027:intron | 30.0% |
| AAAGACCTATTTGTTCCGAA+TGG | + | chr7.2:43249711-43249730 | MS.gene46027:CDS | 35.0% | |
| AAATGCCTTCAATTGGTGAA+AGG | - | chr7.2:43248714-43248733 | None:intergenic | 35.0% | |
| AACAAGAAGGAACATTATGG+TGG | + | chr7.2:43249324-43249343 | MS.gene46027:CDS | 35.0% | |
| ACCAAAGGGTTCATATTACA+TGG | + | chr7.2:43249888-43249907 | MS.gene46027:CDS | 35.0% | |
| ACGATTATATCGGTGGTATA+AGG | - | chr7.2:43249823-43249842 | None:intergenic | 35.0% | |
| ATACTAGGTGATTGGTATGA+TGG | + | chr7.2:43249452-43249471 | MS.gene46027:intron | 35.0% | |
| ATATGTTCATCCACTTCAAG+TGG | - | chr7.2:43250126-43250145 | None:intergenic | 35.0% | |
| ATCCAAAAAGAACTCGAAAC+AGG | + | chr7.2:43249491-43249510 | MS.gene46027:CDS | 35.0% | |
| ATCGCTTGAGATGAATAAAC+GGG | + | chr7.2:43248849-43248868 | MS.gene46027:intron | 35.0% | |
| ATTATCATTCAACCTCGTTC+CGG | + | chr7.2:43249389-43249408 | MS.gene46027:CDS | 35.0% | |
| ATTCATACCATGAAGATGCA+TGG | - | chr7.2:43250493-43250512 | None:intergenic | 35.0% | |
| ATTTACACCGAAATCGACTA+AGG | + | chr7.2:43250392-43250411 | MS.gene46027:CDS | 35.0% | |
| CAATTGTGACGAACCAAATT+TGG | - | chr7.2:43248751-43248770 | None:intergenic | 35.0% | |
| CACAACAAGAAGGAACATTA+TGG | + | chr7.2:43249321-43249340 | MS.gene46027:CDS | 35.0% | |
| CATCGCTTGAGATGAATAAA+CGG | + | chr7.2:43248848-43248867 | MS.gene46027:intron | 35.0% | |
| CATTTAGCATTTACAGGACA+AGG | - | chr7.2:43250177-43250196 | None:intergenic | 35.0% | |
| CCTGTAAATGCTAAATGTAC+AGG | + | chr7.2:43250180-43250199 | MS.gene46027:CDS | 35.0% | |
| CCTGTACATTTAGCATTTAC+AGG | - | chr7.2:43250183-43250202 | None:intergenic | 35.0% | |
| CGTATTATATATGCAGGGTT+CGG | - | chr7.2:43248892-43248911 | None:intergenic | 35.0% | |
| CGTCCAAATAGTAAATGATC+AGG | + | chr7.2:43248187-43248206 | MS.gene46027:intron | 35.0% | |
| CTGTAACAATCACTTGTTCA+TGG | - | chr7.2:43248540-43248559 | None:intergenic | 35.0% | |
| GTATTATATATGCAGGGTTC+GGG | - | chr7.2:43248891-43248910 | None:intergenic | 35.0% | |
| GTGGATGATCATAATCTATG+GGG | + | chr7.2:43250815-43250834 | MS.gene46027:CDS | 35.0% | |
| TAACATTTAGGCAAATCAGC+AGG | - | chr7.2:43250902-43250921 | None:intergenic | 35.0% | |
| TACTTGAGTTTATCGGTAGT+AGG | - | chr7.2:43250552-43250571 | None:intergenic | 35.0% | |
| TATAAGCTGAAAGTGAAGCA+AGG | + | chr7.2:43249688-43249707 | MS.gene46027:CDS | 35.0% | |
| TATGTTCATCCACTTCAAGT+GGG | - | chr7.2:43250125-43250144 | None:intergenic | 35.0% | |
| TCAAACCTTTCACCAATTGA+AGG | + | chr7.2:43248706-43248725 | MS.gene46027:intron | 35.0% | |
| TCTGATGCTTTCACAATCAA+CGG | + | chr7.2:43249527-43249546 | MS.gene46027:CDS | 35.0% | |
| TGTAATATGAACCCTTTGGT+TGG | - | chr7.2:43249888-43249907 | None:intergenic | 35.0% | |
| TTCATACCATGAAGATGCAT+GGG | - | chr7.2:43250492-43250511 | None:intergenic | 35.0% | |
| TTTAGGAAATGGAAATCGAC+CGG | - | chr7.2:43249411-43249430 | None:intergenic | 35.0% | |
| ! | ATACTTGGGTTTACTAGTCT+TGG | - | chr7.2:43249021-43249040 | None:intergenic | 35.0% |
| ! | ATGGAATATCCTTTTCCAAC+AGG | - | chr7.2:43250258-43250277 | None:intergenic | 35.0% |
| ! | ATGGTTTTTGCATTGTCATG+TGG | + | chr7.2:43250796-43250815 | MS.gene46027:CDS | 35.0% |
| ! | CTTTATCTTTTTGCGAAGGT+GGG | + | chr7.2:43248293-43248312 | MS.gene46027:intron | 35.0% |
| ! | GATGCAAATTTTTGTCCAAG+TGG | - | chr7.2:43250207-43250226 | None:intergenic | 35.0% |
| ! | GTCTGCTGTGAAAAGTATAT+CGG | - | chr7.2:43249866-43249885 | None:intergenic | 35.0% |
| ! | GTTCTTTCTCTGGATTTTGA+TGG | - | chr7.2:43249100-43249119 | None:intergenic | 35.0% |
| ! | TTGGTATGATGGAAATGTTG+AGG | + | chr7.2:43249463-43249482 | MS.gene46027:intron | 35.0% |
| ! | TTGTTATGAAGTGGTAATGC+TGG | - | chr7.2:43250033-43250052 | None:intergenic | 35.0% |
| ! | TTTTTGCTTCCTGTTGGAAA+AGG | + | chr7.2:43250246-43250265 | MS.gene46027:CDS | 35.0% |
| !! | ACGAAGTCGAAAATTTTTGG+AGG | - | chr7.2:43250339-43250358 | None:intergenic | 35.0% |
| !! | CGAAGTCGAAAATTTTTGGA+GGG | - | chr7.2:43250338-43250357 | None:intergenic | 35.0% |
| !! | TTGATTGTGAAAGCATCAGA+CGG | - | chr7.2:43249527-43249546 | None:intergenic | 35.0% |
| !! | TTTGGTGTTATGGCAAACAT+GGG | + | chr7.2:43247834-43247853 | MS.gene46027:CDS | 35.0% |
| !!! | CAACTTTTGATAGTGAGTTC+CGG | - | chr7.2:43248328-43248347 | None:intergenic | 35.0% |
| !!! | TTTTGGTGTTATGGCAAACA+TGG | + | chr7.2:43247833-43247852 | MS.gene46027:CDS | 35.0% |
| ACATACCAGGATTGTCAGTT+CGG | - | chr7.2:43250644-43250663 | None:intergenic | 40.0% | |
| ATGAAATCCACGTGTTAGGT+CGG | - | chr7.2:43248373-43248392 | None:intergenic | 40.0% | |
| CAAATACAATTCAACGGTGG+AGG | + | chr7.2:43250425-43250444 | MS.gene46027:CDS | 40.0% | |
| CAAATTCACAGTTGTAGCCA+TGG | + | chr7.2:43249780-43249799 | MS.gene46027:CDS | 40.0% | |
| CCACCTTCGCAAAAAGATAA+AGG | - | chr7.2:43248295-43248314 | None:intergenic | 40.0% | |
| CGGAACTCACTATCAAAAGT+TGG | + | chr7.2:43248326-43248345 | MS.gene46027:intron | 40.0% | |
| CTATATAGTGCATGGTCAGA+TGG | + | chr7.2:43249233-43249252 | MS.gene46027:CDS | 40.0% | |
| GAATCCTTCAATTCGCAACA+CGG | + | chr7.2:43250581-43250600 | MS.gene46027:CDS | 40.0% | |
| GCCATGTAATATGAACCCTT+TGG | - | chr7.2:43249892-43249911 | None:intergenic | 40.0% | |
| GGAACGAGGTTGAATGATAA+TGG | - | chr7.2:43249390-43249409 | None:intergenic | 40.0% | |
| GTTGACCATTCGGAACAAAT+AGG | - | chr7.2:43249719-43249738 | None:intergenic | 40.0% | |
| TACAGTTGAACGCACTTTCT+TGG | + | chr7.2:43247897-43247916 | MS.gene46027:CDS | 40.0% | |
| TATATCGGTGGTATAAGGCT+CGG | - | chr7.2:43249818-43249837 | None:intergenic | 40.0% | |
| TCCATTTCCTAAACCCTACA+AGG | + | chr7.2:43249418-43249437 | MS.gene46027:CDS | 40.0% | |
| TCCTTGTAGGGTTTAGGAAA+TGG | - | chr7.2:43249422-43249441 | None:intergenic | 40.0% | |
| TCGATCTCTTGAGCATAACT+CGG | - | chr7.2:43248928-43248947 | None:intergenic | 40.0% | |
| TGTTCCAGCTATATAGTGCA+TGG | + | chr7.2:43249225-43249244 | MS.gene46027:CDS | 40.0% | |
| ! | ACTGGTTCACCAACAACATA+AGG | - | chr7.2:43249922-43249941 | None:intergenic | 40.0% |
| ! | CCTTTATCTTTTTGCGAAGG+TGG | + | chr7.2:43248292-43248311 | MS.gene46027:intron | 40.0% |
| ! | TATGTTGTTGGTGAACCAGT+AGG | + | chr7.2:43249922-43249941 | MS.gene46027:CDS | 40.0% |
| ! | TGAAAAGTATATCGGCGCTT+TGG | - | chr7.2:43249858-43249877 | None:intergenic | 40.0% |
| ! | TGCTTCACCTTAGTCGATTT+CGG | - | chr7.2:43250402-43250421 | None:intergenic | 40.0% |
| !! | AACATAACTGGTCTTGTTGG+GGG | + | chr7.2:43250081-43250100 | MS.gene46027:CDS | 40.0% |
| !! | ACAGTTAATGGACTTTACCC+AGG | + | chr7.2:43248556-43248575 | MS.gene46027:CDS | 40.0% |
| !! | AGCAACATAACTGGTCTTGT+TGG | + | chr7.2:43250078-43250097 | MS.gene46027:CDS | 40.0% |
| !! | CAACATAACTGGTCTTGTTG+GGG | + | chr7.2:43250080-43250099 | MS.gene46027:CDS | 40.0% |
| !! | CTTTCTCTGGATTTTGATGG+TGG | - | chr7.2:43249097-43249116 | None:intergenic | 40.0% |
| !! | GCAACATAACTGGTCTTGTT+GGG | + | chr7.2:43250079-43250098 | MS.gene46027:CDS | 40.0% |
| !!! | ATGTTTTGGCTCAAGACTTC+GGG | + | chr7.2:43250517-43250536 | MS.gene46027:CDS | 40.0% |
| !!! | CATGTTTTGGCTCAAGACTT+CGG | + | chr7.2:43250516-43250535 | MS.gene46027:CDS | 40.0% |
| !!! | GAGTCATTTTTGCTTCCTGT+TGG | + | chr7.2:43250240-43250259 | MS.gene46027:CDS | 40.0% |
| !!! | TGTTTATTTTGGCAGGGGTA+TGG | + | chr7.2:43250777-43250796 | MS.gene46027:intron | 40.0% |
| AGATTCCGAACTGACAATCC+TGG | + | chr7.2:43250636-43250655 | MS.gene46027:CDS | 45.0% | |
| AGTCATCCCATGCATCTTCA+TGG | + | chr7.2:43250483-43250502 | MS.gene46027:CDS | 45.0% | |
| CATTTAGGCAAATCAGCAGG+TGG | - | chr7.2:43250899-43250918 | None:intergenic | 45.0% | |
| CCAACACCTTCAACTTCACT+TGG | + | chr7.2:43250869-43250888 | MS.gene46027:CDS | 45.0% | |
| CTGACCATGCACTATATAGC+TGG | - | chr7.2:43249232-43249251 | None:intergenic | 45.0% | |
| GAACAATTGAAGAGATCGCC+AGG | - | chr7.2:43249557-43249576 | None:intergenic | 45.0% | |
| GAATTGTCGAAGAGTCCTAC+TGG | - | chr7.2:43249940-43249959 | None:intergenic | 45.0% | |
| GATATAATCGTCATCGCAGC+CGG | + | chr7.2:43249832-43249851 | MS.gene46027:CDS | 45.0% | |
| GCTAAATGTACAGGTCCACT+TGG | + | chr7.2:43250189-43250208 | MS.gene46027:CDS | 45.0% | |
| GCTGCATCACCTTATGTTGT+TGG | + | chr7.2:43249910-43249929 | MS.gene46027:CDS | 45.0% | |
| GGCTGCGATGACGATTATAT+CGG | - | chr7.2:43249833-43249852 | None:intergenic | 45.0% | |
| GGTACTTCCTTGTAGGGTTT+AGG | - | chr7.2:43249428-43249447 | None:intergenic | 45.0% | |
| GTAACCCTCGTAAAAGACGA+CGG | - | chr7.2:43249974-43249993 | None:intergenic | 45.0% | |
| GTTGTACGTGCAACAGTTCA+CGG | + | chr7.2:43249362-43249381 | MS.gene46027:CDS | 45.0% | |
| TCTTGTTGGGGGTCCAAATT+GGG | + | chr7.2:43250092-43250111 | MS.gene46027:CDS | 45.0% | |
| TGAAATCCACGTGTTAGGTC+GGG | - | chr7.2:43248372-43248391 | None:intergenic | 45.0% | |
| TGCGATGACGATTATATCGG+TGG | - | chr7.2:43249830-43249849 | None:intergenic | 45.0% | |
| TTCACAATCAACGGCTTTCC+TGG | + | chr7.2:43249536-43249555 | MS.gene46027:CDS | 45.0% | |
| TTCACAGCAGACCAACCAAA+GGG | + | chr7.2:43249874-43249893 | MS.gene46027:CDS | 45.0% | |
| TTTCACAGCAGACCAACCAA+AGG | + | chr7.2:43249873-43249892 | MS.gene46027:CDS | 45.0% | |
| ! | AGTGGTAATGCTGGCATCAA+AGG | - | chr7.2:43250024-43250043 | None:intergenic | 45.0% |
| ! | ATCTTTTTGCGAAGGTGGGT+TGG | + | chr7.2:43248297-43248316 | MS.gene46027:intron | 45.0% |
| ! | CCAAGTGAAGTTGAAGGTGT+TGG | - | chr7.2:43250872-43250891 | None:intergenic | 45.0% |
| !! | TCTTTTTGCGAAGGTGGGTT+GGG | + | chr7.2:43248298-43248317 | MS.gene46027:intron | 45.0% |
| !!! | CGCCTGTTTCGAGTTCTTTT+TGG | - | chr7.2:43249496-43249515 | None:intergenic | 45.0% |
| AAGTATATCGGCGCTTTGGC+CGG | - | chr7.2:43249854-43249873 | None:intergenic | 50.0% | |
| AATGGAAATCGACCGGAACG+AGG | - | chr7.2:43249404-43249423 | None:intergenic | 50.0% | |
| AATTTCCCCGACCTAACACG+TGG | + | chr7.2:43248363-43248382 | MS.gene46027:intron | 50.0% | |
| ACGTGTTAGGTCGGGGAAAT+TGG | - | chr7.2:43248364-43248383 | None:intergenic | 50.0% | |
| ACTTTACCCAGGTCCAAAGC+TGG | + | chr7.2:43248567-43248586 | MS.gene46027:CDS | 50.0% | |
| AGGTCCAAAGCTGGAAGTCA+GGG | + | chr7.2:43248576-43248595 | MS.gene46027:CDS | 50.0% | |
| CATCCACTTCAAGTGGGACA+GGG | - | chr7.2:43250119-43250138 | None:intergenic | 50.0% | |
| GAAATCCACGTGTTAGGTCG+GGG | - | chr7.2:43248371-43248390 | None:intergenic | 50.0% | |
| GCAACCGTGTTGCGAATTGA+AGG | - | chr7.2:43250588-43250607 | None:intergenic | 50.0% | |
| GGTGGACCAAGTGAAGTTGA+AGG | - | chr7.2:43250878-43250897 | None:intergenic | 50.0% | |
| TCATCCACTTCAAGTGGGAC+AGG | - | chr7.2:43250120-43250139 | None:intergenic | 50.0% | |
| TTAGGCAAATCAGCAGGTGG+TGG | - | chr7.2:43250896-43250915 | None:intergenic | 50.0% | |
| ! | CAGGGTTCGGGTTTAAACTC+GGG | - | chr7.2:43248879-43248898 | None:intergenic | 50.0% |
| ! | GCAGGGTTCGGGTTTAAACT+CGG | - | chr7.2:43248880-43248899 | None:intergenic | 50.0% |
| ! | GTCTTGTTGGGGGTCCAAAT+TGG | + | chr7.2:43250091-43250110 | MS.gene46027:CDS | 50.0% |
| !! | GGTATAAGGCTCGGTGTATG+CGG | - | chr7.2:43249809-43249828 | None:intergenic | 50.0% |
| !! | TGACTTCCAGCTTTGGACCT+GGG | - | chr7.2:43248576-43248595 | None:intergenic | 50.0% |
| !!! | CTTTTTGCGAAGGTGGGTTG+GGG | + | chr7.2:43248299-43248318 | MS.gene46027:intron | 50.0% |
| AAAGACGACGGCACGAGTTG+TGG | - | chr7.2:43249962-43249981 | None:intergenic | 55.0% | |
| AGTGGGACAGGGACCCAATT+TGG | - | chr7.2:43250108-43250127 | None:intergenic | 55.0% | |
| CAGGTCCAAAGCTGGAAGTC+AGG | + | chr7.2:43248575-43248594 | MS.gene46027:CDS | 55.0% | |
| CCAAAGCTGGAAGTCAGGGA+TGG | + | chr7.2:43248580-43248599 | MS.gene46027:CDS | 55.0% | |
| CCATCCCTGACTTCCAGCTT+TGG | - | chr7.2:43248583-43248602 | None:intergenic | 55.0% | |
| ! | CGTGCCGTCGTCTTTTACGA+GGG | + | chr7.2:43249967-43249986 | MS.gene46027:CDS | 55.0% |
| ! | TCGTGCCGTCGTCTTTTACG+AGG | + | chr7.2:43249966-43249985 | MS.gene46027:CDS | 55.0% |
| !! | CGAGTGCAGCGTTGACCATT+CGG | - | chr7.2:43249729-43249748 | None:intergenic | 55.0% |
| !! | CTGACTTCCAGCTTTGGACC+TGG | - | chr7.2:43248577-43248596 | None:intergenic | 55.0% |
| ATAGCAGCCCATCCTCCCAC+CGG | - | chr7.2:43250615-43250634 | None:intergenic | 60.0% | |
| GGTCCCTGTCCCACTTGAAG+TGG | + | chr7.2:43250113-43250132 | MS.gene46027:CDS | 60.0% | |
| TCGCAACACGGTTGCTGTGC+CGG | + | chr7.2:43250593-43250612 | MS.gene46027:CDS | 60.0% | |
| ! | AACACGGTTGCTGTGCCGGT+GGG | + | chr7.2:43250597-43250616 | MS.gene46027:CDS | 60.0% |
| ! | CTCGGTGTATGCGGCATCCA+TGG | - | chr7.2:43249800-43249819 | None:intergenic | 60.0% |
| !! | CGAAGGTGGGTTGGGGAAAC+CGG | + | chr7.2:43248306-43248325 | MS.gene46027:intron | 60.0% |
| CAACACGGTTGCTGTGCCGG+TGG | + | chr7.2:43250596-43250615 | MS.gene46027:CDS | 65.0% | |
| ! | TGCTGTGCCGGTGGGAGGAT+GGG | + | chr7.2:43250605-43250624 | MS.gene46027:CDS | 65.0% |
| ! | TTGCTGTGCCGGTGGGAGGA+TGG | + | chr7.2:43250604-43250623 | MS.gene46027:CDS | 65.0% |
| ! | ACGGTTGCTGTGCCGGTGGG+AGG | + | chr7.2:43250600-43250619 | MS.gene46027:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 43247826 | 43250922 | 43247826 | ID=MS.gene46027 |
| chr7.2 | mRNA | 43247826 | 43250922 | 43247826 | ID=MS.gene46027.t1;Parent=MS.gene46027 |
| chr7.2 | exon | 43247826 | 43247918 | 43247826 | ID=MS.gene46027.t1.exon1;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43247826 | 43247918 | 43247826 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| chr7.2 | exon | 43248508 | 43248659 | 43248508 | ID=MS.gene46027.t1.exon2;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43248508 | 43248659 | 43248508 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| chr7.2 | exon | 43249217 | 43249442 | 43249217 | ID=MS.gene46027.t1.exon3;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43249217 | 43249442 | 43249217 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| chr7.2 | exon | 43249485 | 43249584 | 43249485 | ID=MS.gene46027.t1.exon4;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43249485 | 43249584 | 43249485 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| chr7.2 | exon | 43249683 | 43250657 | 43249683 | ID=MS.gene46027.t1.exon5;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43249683 | 43250657 | 43249683 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| chr7.2 | exon | 43250792 | 43250922 | 43250792 | ID=MS.gene46027.t1.exon6;Parent=MS.gene46027.t1 |
| chr7.2 | CDS | 43250792 | 43250922 | 43250792 | ID=cds.MS.gene46027.t1;Parent=MS.gene46027.t1 |
| Gene Sequence |
| Protein sequence |
