Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049077.01.T01 | YP_001381733.1 | 100 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 3.69E-32 | 115 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049077.01.T01 | Q32902 | 98.387 | 62 | 1 | 0 | 1 | 62 | 1 | 62 | 3.14E-34 | 113 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049077.01.T01 | A0A0F6NLD4 | 100.000 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 1.76e-32 | 115 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047910.01 | MsG0080049077.01 | 0.823075 | 1.683550e-53 | 1.434920e-50 |
MsG0080048059.01 | MsG0080049077.01 | 0.836382 | 9.671544e-57 | 1.216796e-53 |
MsG0080048611.01 | MsG0080049077.01 | 0.824295 | 8.723000e-54 | 7.694290e-51 |
MsG0080048689.01 | MsG0080049077.01 | 0.809693 | 1.667945e-50 | 9.859811e-48 |
MsG0080048694.01 | MsG0080049077.01 | 0.802897 | 4.510535e-49 | 2.235524e-46 |
MsG0080048695.01 | MsG0080049077.01 | 0.803046 | 4.202983e-49 | 2.090861e-46 |
MsG0080048697.01 | MsG0080049077.01 | 0.870047 | 1.960014e-66 | 7.518231e-63 |
MsG0080048917.01 | MsG0080049077.01 | 0.810210 | 1.290708e-50 | 7.733348e-48 |
MsG0080048929.01 | MsG0080049077.01 | 0.803276 | 3.766653e-49 | 1.884929e-46 |
MsG0080049015.01 | MsG0080049077.01 | 0.833683 | 4.633247e-56 | 5.374733e-53 |
MsG0080049053.01 | MsG0080049077.01 | 0.804223 | 2.394433e-49 | 1.227726e-46 |
MsG0080049072.01 | MsG0080049077.01 | 0.825767 | 3.916409e-54 | 3.603520e-51 |
MsG0080049076.01 | MsG0080049077.01 | 0.825682 | 4.102200e-54 | 3.765301e-51 |
MsG0080049077.01 | MsG0080049080.01 | 0.801070 | 1.070835e-48 | 5.066898e-46 |
MsG0080049077.01 | MsG0180000193.01 | 0.818296 | 2.111333e-52 | 1.574170e-49 |
MsG0080049077.01 | MsG0180000194.01 | 0.812082 | 5.069933e-51 | 3.192730e-48 |
MsG0080049077.01 | MsG0180000306.01 | 0.858611 | 7.315780e-63 | 1.878004e-59 |
MsG0080049077.01 | MsG0180000325.01 | 0.826062 | 3.334166e-54 | 3.093467e-51 |
MsG0080049077.01 | MsG0180000467.01 | 0.809957 | 1.463505e-50 | 8.711676e-48 |
MsG0080049077.01 | MsG0180001249.01 | 0.802944 | 4.412149e-49 | 2.189232e-46 |
MsG0080049077.01 | MsG0180001264.01 | -0.812109 | 5.002588e-51 | 3.152528e-48 |
MsG0080049077.01 | MsG0180001507.01 | 0.824193 | 9.214248e-54 | 8.104774e-51 |
MsG0080049077.01 | MsG0180001919.01 | 0.979943 | 4.309183e-149 | 9.700334e-143 |
MsG0080049077.01 | MsG0180002227.01 | 0.814158 | 1.776222e-51 | 1.182803e-48 |
MsG0080049077.01 | MsG0180003296.01 | 0.822312 | 2.533518e-53 | 2.113034e-50 |
MsG0080049077.01 | MsG0180003779.01 | 0.848825 | 4.788373e-60 | 8.898745e-57 |
MsG0080049077.01 | MsG0180003904.01 | 0.820386 | 7.051107e-53 | 5.571469e-50 |
MsG0080049077.01 | MsG0180003933.01 | 0.817456 | 3.267103e-52 | 2.380557e-49 |
MsG0080049077.01 | MsG0180003985.01 | 0.841511 | 4.546670e-58 | 6.696008e-55 |
MsG0080049077.01 | MsG0180004177.01 | 0.836640 | 8.310366e-57 | 1.053557e-53 |
MsG0080049077.01 | MsG0180004292.01 | 0.824499 | 7.809247e-54 | 6.929159e-51 |
MsG0080049077.01 | MsG0180004553.01 | 0.813514 | 2.462978e-51 | 1.611779e-48 |
MsG0080049077.01 | MsG0180004739.01 | 0.805113 | 1.561641e-49 | 8.193121e-47 |
MsG0080049077.01 | MsG0180005291.01 | 0.812449 | 4.216951e-51 | 2.682144e-48 |
MsG0080049077.01 | MsG0180005879.01 | 0.812662 | 3.788004e-51 | 2.422706e-48 |
MsG0080049077.01 | MsG0180006212.01 | 0.804375 | 2.226974e-49 | 1.146376e-46 |
MsG0080049077.01 | MsG0280006336.01 | 0.843919 | 1.041752e-58 | 1.654878e-55 |
MsG0080049077.01 | MsG0280006452.01 | 0.812697 | 3.720831e-51 | 2.382017e-48 |
MsG0080049077.01 | MsG0280007041.01 | 0.824175 | 9.307510e-54 | 8.182669e-51 |
MsG0080049077.01 | MsG0280007042.01 | 0.822586 | 2.188141e-53 | 1.839403e-50 |
MsG0080049077.01 | MsG0280007069.01 | 0.820013 | 8.582798e-53 | 6.711923e-50 |
MsG0080049077.01 | MsG0280007136.01 | 0.807802 | 4.231563e-50 | 2.379320e-47 |
MsG0080049077.01 | MsG0280007233.01 | 0.823773 | 1.156448e-53 | 1.005327e-50 |
MsG0080049077.01 | MsG0280007247.01 | 0.823507 | 1.334562e-53 | 1.151370e-50 |
MsG0080049077.01 | MsG0280008430.01 | 0.804996 | 1.652062e-49 | 8.641617e-47 |
MsG0080049077.01 | MsG0280009776.01 | 0.831902 | 1.282736e-55 | 1.411462e-52 |
MsG0080049077.01 | MsG0280010142.01 | 0.817200 | 3.730494e-52 | 2.699093e-49 |
MsG0080049077.01 | MsG0280010143.01 | 0.880075 | 7.397524e-70 | 4.111145e-66 |
MsG0080049077.01 | MsG0280010144.01 | 0.880015 | 7.771242e-70 | 4.309220e-66 |
MsG0080049077.01 | MsG0280010704.01 | 0.834729 | 2.532089e-56 | 3.030717e-53 |
MsG0080049077.01 | MsG0280011301.01 | 0.812603 | 3.900970e-51 | 2.491101e-48 |
MsG0080049077.01 | MsG0380012065.01 | 0.836479 | 9.133653e-57 | 1.152448e-53 |
MsG0080049077.01 | MsG0380012281.01 | 0.818256 | 2.155050e-52 | 1.604960e-49 |
MsG0080049077.01 | MsG0380012444.01 | 0.806527 | 7.878410e-50 | 4.285834e-47 |
MsG0080049077.01 | MsG0380013111.01 | 0.808674 | 2.757345e-50 | 1.586291e-47 |
MsG0080049077.01 | MsG0380013506.01 | 0.805015 | 1.636860e-49 | 8.566201e-47 |
MsG0080049077.01 | MsG0380013887.01 | 0.807453 | 5.017793e-50 | 2.795999e-47 |
MsG0080049077.01 | MsG0380013888.01 | 0.831829 | 1.337306e-55 | 1.468295e-52 |
MsG0080049077.01 | MsG0380013891.01 | 0.850225 | 1.948114e-60 | 3.789881e-57 |
MsG0080049077.01 | MsG0380013918.01 | 0.833023 | 6.765359e-56 | 7.695461e-53 |
MsG0080049077.01 | MsG0380013919.01 | 0.865587 | 5.298734e-65 | 1.733247e-61 |
MsG0080049077.01 | MsG0380013921.01 | 0.857002 | 2.195648e-62 | 5.339575e-59 |
MsG0080049077.01 | MsG0380013925.01 | 0.854697 | 1.035586e-61 | 2.332651e-58 |
MsG0080049077.01 | MsG0380013926.01 | 0.808200 | 3.480915e-50 | 1.978000e-47 |
MsG0080049077.01 | MsG0380013927.01 | 0.802956 | 4.385270e-49 | 2.176639e-46 |
MsG0080049077.01 | MsG0380013928.01 | 0.819407 | 1.180716e-52 | 9.077868e-50 |
MsG0080049077.01 | MsG0380013932.01 | 0.814341 | 1.618322e-51 | 1.083074e-48 |
MsG0080049077.01 | MsG0380013935.01 | 0.836629 | 8.367502e-57 | 1.060455e-53 |
MsG0080049077.01 | MsG0380013938.01 | 0.864680 | 1.021215e-64 | 3.233944e-61 |
MsG0080049077.01 | MsG0380013943.01 | 0.803217 | 3.873791e-49 | 1.935624e-46 |
MsG0080049077.01 | MsG0380013945.01 | 0.820585 | 6.346858e-53 | 5.042125e-50 |
MsG0080049077.01 | MsG0380013954.01 | 0.883884 | 3.073675e-71 | 1.984377e-67 |
MsG0080049077.01 | MsG0380013956.01 | 0.849415 | 3.281952e-60 | 6.216786e-57 |
MsG0080049077.01 | MsG0380013958.01 | 0.809752 | 1.620159e-50 | 9.592557e-48 |
MsG0080049077.01 | MsG0380013963.01 | 0.823237 | 1.543568e-53 | 1.321505e-50 |
MsG0080049077.01 | MsG0380013964.01 | 0.818093 | 2.346614e-52 | 1.739776e-49 |
MsG0080049077.01 | MsG0380013966.01 | 0.808055 | 3.737153e-50 | 2.115318e-47 |
MsG0080049077.01 | MsG0380013967.01 | 0.803144 | 4.010038e-49 | 1.999937e-46 |
MsG0080049077.01 | MsG0380013971.01 | 0.832348 | 9.948284e-56 | 1.108926e-52 |
MsG0080049077.01 | MsG0380013975.01 | 0.855886 | 4.669218e-62 | 1.094079e-58 |
MsG0080049077.01 | MsG0380013976.01 | 0.826128 | 3.216067e-54 | 2.989545e-51 |
MsG0080049077.01 | MsG0380013977.01 | 0.811079 | 8.376832e-51 | 5.136462e-48 |
MsG0080049077.01 | MsG0380013979.01 | 0.808478 | 3.036247e-50 | 1.737938e-47 |
MsG0080049077.01 | MsG0380013981.01 | 0.804484 | 2.113396e-49 | 1.090923e-46 |
MsG0080049077.01 | MsG0380013983.01 | 0.821281 | 4.388467e-53 | 3.554587e-50 |
MsG0080049077.01 | MsG0380013984.01 | 0.808994 | 2.356041e-50 | 1.366953e-47 |
MsG0080049077.01 | MsG0380013985.01 | 0.826214 | 3.067918e-54 | 2.858844e-51 |
MsG0080049077.01 | MsG0380013996.01 | 0.804477 | 2.119790e-49 | 1.094052e-46 |
MsG0080049077.01 | MsG0380013999.01 | 0.837832 | 4.119595e-57 | 5.416922e-54 |
MsG0080049077.01 | MsG0380014004.01 | 0.824167 | 9.345206e-54 | 8.214097e-51 |
MsG0080049077.01 | MsG0380014005.01 | 0.810573 | 1.077791e-50 | 6.520089e-48 |
MsG0080049077.01 | MsG0380014017.01 | 0.835198 | 1.929651e-56 | 2.342780e-53 |
MsG0080049077.01 | MsG0380014020.01 | 0.813061 | 3.096556e-51 | 2.001504e-48 |
MsG0080049077.01 | MsG0380014021.01 | 0.854516 | 1.168904e-61 | 2.617348e-58 |
MsG0080049077.01 | MsG0380014022.01 | 0.803722 | 3.043684e-49 | 1.540704e-46 |
MsG0080049077.01 | MsG0380014024.01 | 0.839424 | 1.597863e-57 | 2.205793e-54 |
MsG0080049077.01 | MsG0380014028.01 | 0.833020 | 6.779613e-56 | 7.710854e-53 |
MsG0080049077.01 | MsG0380014029.01 | 0.809594 | 1.752029e-50 | 1.032978e-47 |
MsG0080049077.01 | MsG0380014032.01 | 0.821362 | 4.203265e-53 | 3.412317e-50 |
MsG0080049077.01 | MsG0380014034.01 | 0.808479 | 3.035524e-50 | 1.737543e-47 |
MsG0080049077.01 | MsG0380014035.01 | 0.844595 | 6.858075e-59 | 1.112696e-55 |
MsG0080049077.01 | MsG0380014036.01 | 0.800869 | 1.177176e-48 | 5.541673e-46 |
MsG0080049077.01 | MsG0380014050.01 | 0.866547 | 2.633573e-65 | 8.910665e-62 |
MsG0080049077.01 | MsG0380014729.01 | 0.805158 | 1.527668e-49 | 8.024390e-47 |
MsG0080049077.01 | MsG0380015271.01 | 0.817521 | 3.159297e-52 | 2.306011e-49 |
MsG0080049077.01 | MsG0380015348.01 | 0.810602 | 1.062395e-50 | 6.432086e-48 |
MsG0080049077.01 | MsG0380015439.01 | 0.826651 | 2.413130e-54 | 2.276842e-51 |
MsG0080049077.01 | MsG0380015719.01 | 0.810916 | 9.084483e-51 | 5.546727e-48 |
MsG0080049077.01 | MsG0380015974.01 | 0.807108 | 5.936548e-50 | 3.278195e-47 |
MsG0080049077.01 | MsG0380016241.01 | 0.814879 | 1.230583e-51 | 8.355419e-49 |
MsG0080049077.01 | MsG0380016362.01 | 0.807117 | 5.912788e-50 | 3.265815e-47 |
MsG0080049077.01 | MsG0380016424.01 | 0.813175 | 2.923172e-51 | 1.895221e-48 |
MsG0080049077.01 | MsG0380016531.01 | 0.839752 | 1.313308e-57 | 1.831079e-54 |
MsG0080049077.01 | MsG0380016790.01 | 0.828193 | 1.029781e-54 | 1.016325e-51 |
MsG0080049077.01 | MsG0380016835.01 | 0.811101 | 8.284079e-51 | 5.082573e-48 |
MsG0080049077.01 | MsG0380016931.01 | 0.804082 | 2.562771e-49 | 1.309358e-46 |
MsG0080049077.01 | MsG0380016932.01 | 0.813892 | 2.033181e-51 | 1.344226e-48 |
MsG0080049077.01 | MsG0380016934.01 | 0.814154 | 1.779660e-51 | 1.184981e-48 |
MsG0080049077.01 | MsG0380016960.01 | 0.828750 | 7.558844e-55 | 7.580907e-52 |
MsG0080049077.01 | MsG0380017141.01 | 0.830896 | 2.267990e-55 | 2.422045e-52 |
MsG0080049077.01 | MsG0380017309.01 | 0.835732 | 1.413597e-56 | 1.743994e-53 |
MsG0080049077.01 | MsG0380017406.01 | 0.815528 | 8.827566e-52 | 6.101246e-49 |
MsG0080049077.01 | MsG0380017895.01 | 0.822059 | 2.901085e-53 | 2.401878e-50 |
MsG0080049077.01 | MsG0380017962.01 | 0.824889 | 6.318042e-54 | 5.670039e-51 |
MsG0080049077.01 | MsG0380018066.01 | 0.808528 | 2.962718e-50 | 1.698029e-47 |
MsG0080049077.01 | MsG0380018072.01 | 0.846592 | 1.972115e-59 | 3.411341e-56 |
MsG0080049077.01 | MsG0480018190.01 | 0.811435 | 7.009922e-51 | 4.339036e-48 |
MsG0080049077.01 | MsG0480019028.01 | 0.801466 | 8.884618e-49 | 4.245944e-46 |
MsG0080049077.01 | MsG0480020051.01 | 0.839054 | 1.992978e-57 | 2.719973e-54 |
MsG0080049077.01 | MsG0480020938.01 | 0.802032 | 6.800495e-49 | 3.296872e-46 |
MsG0080049077.01 | MsG0480021205.01 | 0.819232 | 1.294267e-52 | 9.902553e-50 |
MsG0080049077.01 | MsG0480022295.01 | 0.845903 | 3.037583e-59 | 5.139122e-56 |
MsG0080049077.01 | MsG0480022296.01 | 0.813392 | 2.619548e-51 | 1.708630e-48 |
MsG0080049077.01 | MsG0480022417.01 | 0.823654 | 1.232856e-53 | 1.068141e-50 |
MsG0080049077.01 | MsG0480022466.01 | 0.825678 | 4.111316e-54 | 3.773158e-51 |
MsG0080049077.01 | MsG0480022837.01 | 0.822392 | 2.427498e-53 | 2.029313e-50 |
MsG0080049077.01 | MsG0480023217.01 | 0.814749 | 1.314977e-51 | 8.897414e-49 |
MsG0080049077.01 | MsG0480023749.01 | 0.807205 | 5.662277e-50 | 3.134816e-47 |
MsG0080049077.01 | MsG0480023881.01 | 0.831757 | 1.392508e-55 | 1.525688e-52 |
MsG0080049077.01 | MsG0480023993.01 | 0.802681 | 4.998920e-49 | 2.463893e-46 |
MsG0080049077.01 | MsG0580024128.01 | 0.818145 | 2.284085e-52 | 1.695928e-49 |
MsG0080049077.01 | MsG0580024309.01 | 0.832157 | 1.109539e-55 | 1.229801e-52 |
MsG0080049077.01 | MsG0580024571.01 | 0.815481 | 9.042444e-52 | 6.242234e-49 |
MsG0080049077.01 | MsG0580024678.01 | 0.805006 | 1.643872e-49 | 8.600962e-47 |
MsG0080049077.01 | MsG0580024875.01 | 0.830988 | 2.153102e-55 | 2.305571e-52 |
MsG0080049077.01 | MsG0580024982.01 | 0.820425 | 6.906190e-53 | 5.462867e-50 |
MsG0080049077.01 | MsG0580025392.01 | 0.811693 | 6.163066e-51 | 3.840519e-48 |
MsG0080049077.01 | MsG0580025738.01 | 0.800602 | 1.334506e-48 | 6.239732e-46 |
MsG0080049077.01 | MsG0580027095.01 | 0.834426 | 3.018191e-56 | 3.580700e-53 |
MsG0080049077.01 | MsG0580027249.01 | 0.840618 | 7.801159e-58 | 1.117406e-54 |
MsG0080049077.01 | MsG0580027677.01 | 0.838323 | 3.078052e-57 | 4.107965e-54 |
MsG0080049077.01 | MsG0580029172.01 | 0.806353 | 8.571967e-50 | 4.642472e-47 |
MsG0080049077.01 | MsG0680030290.01 | 0.811341 | 7.348835e-51 | 4.537058e-48 |
MsG0080049077.01 | MsG0680030439.01 | 0.829436 | 5.151980e-55 | 5.272594e-52 |
MsG0080049077.01 | MsG0680030756.01 | 0.815358 | 9.630314e-52 | 6.625122e-49 |
MsG0080049077.01 | MsG0680030757.01 | 0.836788 | 7.620777e-57 | 9.705970e-54 |
MsG0080049077.01 | MsG0680030758.01 | 0.805035 | 1.621187e-49 | 8.488530e-47 |
MsG0080049077.01 | MsG0680030759.01 | 0.801538 | 8.589716e-49 | 4.112455e-46 |
MsG0080049077.01 | MsG0680031813.01 | 0.801882 | 7.299509e-49 | 3.525574e-46 |
MsG0080049077.01 | MsG0680032055.01 | 0.830730 | 2.491294e-55 | 2.647462e-52 |
MsG0080049077.01 | MsG0680033007.01 | 0.802294 | 6.006309e-49 | 2.931508e-46 |
MsG0080049077.01 | MsG0780036064.01 | 0.862696 | 4.219433e-64 | 1.246837e-60 |
MsG0080049077.01 | MsG0780036067.01 | 0.804875 | 1.750966e-49 | 9.131413e-47 |
MsG0080049077.01 | MsG0780036068.01 | 0.862380 | 5.281811e-64 | 1.543672e-60 |
MsG0080049077.01 | MsG0780036909.01 | 0.827989 | 1.153438e-54 | 1.131631e-51 |
MsG0080049077.01 | MsG0780038198.01 | 0.872181 | 3.872248e-67 | 1.604816e-63 |
MsG0080049077.01 | MsG0780038496.01 | 0.837420 | 5.252010e-57 | 6.818371e-54 |
MsG0080049077.01 | MsG0780039596.01 | 0.846410 | 2.210168e-59 | 3.801043e-56 |
MsG0080049077.01 | MsG0780039821.01 | 0.809594 | 1.752029e-50 | 1.032978e-47 |
MsG0080049077.01 | MsG0780039859.01 | 0.830391 | 3.016111e-55 | 3.173400e-52 |
MsG0080049077.01 | MsG0780039860.01 | 0.834015 | 3.826583e-56 | 4.483618e-53 |
MsG0080049077.01 | MsG0780040072.01 | 0.812260 | 4.637330e-51 | 2.934460e-48 |
MsG0080049077.01 | MsG0780040121.01 | 0.834260 | 3.322294e-56 | 3.921736e-53 |
MsG0080049077.01 | MsG0780040315.01 | 0.821308 | 4.325836e-53 | 3.506623e-50 |
MsG0080049077.01 | MsG0780040316.01 | 0.837443 | 5.181752e-57 | 6.732187e-54 |
MsG0080049077.01 | MsG0780040317.01 | 0.813570 | 2.394032e-51 | 1.568997e-48 |
MsG0080049077.01 | MsG0780040702.01 | 0.815758 | 7.846989e-52 | 5.458083e-49 |
MsG0080049077.01 | MsG0780040833.01 | 0.826610 | 2.467846e-54 | 2.325711e-51 |
MsG0080049077.01 | MsG0780040894.01 | 0.830293 | 3.185987e-55 | 3.342575e-52 |
MsG0080049077.01 | MsG0780041007.01 | 0.813571 | 2.392805e-51 | 1.568237e-48 |
MsG0080049077.01 | MsG0780041106.01 | 0.833575 | 4.929566e-56 | 5.700091e-53 |
MsG0080049077.01 | MsG0780041478.01 | 0.813015 | 3.169509e-51 | 2.046189e-48 |
MsG0080049077.01 | MsG0780041720.01 | 0.818809 | 1.614637e-52 | 1.221028e-49 |
MsG0080049077.01 | MsG0880041908.01 | 0.800816 | 1.207014e-48 | 5.674139e-46 |
MsG0080049077.01 | MsG0880042889.01 | 0.812060 | 5.125387e-51 | 3.225581e-48 |
MsG0080049077.01 | MsG0880043032.01 | 0.814560 | 1.447536e-51 | 9.745296e-49 |
MsG0080049077.01 | MsG0880043069.01 | 0.800601 | 1.334894e-48 | 6.241449e-46 |
MsG0080049077.01 | MsG0880043541.01 | 0.803477 | 3.420893e-49 | 1.720834e-46 |
MsG0080049077.01 | MsG0880044312.01 | 0.847270 | 1.285865e-59 | 2.273201e-56 |
MsG0080049077.01 | MsG0880044352.01 | 0.837733 | 4.368078e-57 | 5.726411e-54 |
MsG0080049077.01 | MsG0880044440.01 | 0.863809 | 1.909240e-64 | 5.863807e-61 |
MsG0080049077.01 | MsG0880045188.01 | 0.808261 | 3.378892e-50 | 1.923084e-47 |
MsG0080049077.01 | MsG0880045252.01 | 0.822208 | 2.678237e-53 | 2.227016e-50 |
MsG0080049077.01 | MsG0880045274.01 | 0.800802 | 1.214595e-48 | 5.707848e-46 |
MsG0080049077.01 | MsG0880045413.01 | 0.818431 | 1.967063e-52 | 1.472235e-49 |
MsG0080049077.01 | MsG0880045414.01 | 0.806155 | 9.435370e-50 | 5.084562e-47 |
MsG0080049077.01 | MsG0880045778.01 | 0.843962 | 1.014398e-58 | 1.613517e-55 |
MsG0080049077.01 | MsG0880046040.01 | 0.805936 | 1.049357e-49 | 5.623194e-47 |
MsG0080049077.01 | MsG0880046149.01 | 0.802083 | 6.637571e-49 | 3.222167e-46 |
MsG0080049077.01 | MsG0880046219.01 | 0.803066 | 4.163069e-49 | 2.072021e-46 |
MsG0080049077.01 | MsG0880046462.01 | 0.833947 | 3.980350e-56 | 4.654893e-53 |
MsG0080049077.01 | MsG0880046469.01 | 0.805103 | 1.569294e-49 | 8.231171e-47 |
MsG0080049077.01 | MsG0880047318.01 | 0.828395 | 9.208989e-55 | 9.142281e-52 |
MsG0080049077.01 | MsG0880047363.01 | 0.814300 | 1.652433e-51 | 1.104693e-48 |
MsG0080049077.01 | MsG0880047536.01 | 0.800379 | 1.481409e-48 | 6.887815e-46 |
MsG0080049077.01 | MsG0880047628.01 | 0.849136 | 3.924554e-60 | 7.369100e-57 |
MsG0080049077.01 | MsG0880047661.01 | 0.830721 | 2.503489e-55 | 2.659777e-52 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049077.01.T01 | MTR_8g056780 | 100.000 | 62 | 0 | 0 | 1 | 62 | 1 | 62 | 4.46e-36 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0080049077.01.T01 | ATCG00300 | 96.774 | 62 | 2 | 0 | 1 | 62 | 1 | 62 | 5.01e-35 | 112 |
Find 9 sgRNAs with CRISPR-Local
Find 12 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGTACACCAATCAATAAAA+TGG | 0.272913 | contig65end:-1547 | None:intergenic |
GTTGTATTTGCTTCTCCTGA+TGG | 0.417220 | contig65end:+1570 | MsG0080049077.01.T01:CDS |
TATTTGCTTCTCCTGATGGT+TGG | 0.468755 | contig65end:+1574 | MsG0080049077.01.T01:CDS |
TCCGGTACATCATTATGGAT+TGG | 0.474883 | contig65end:+1621 | MsG0080049077.01.T01:CDS |
TTATTACTTGACCAACCATC+AGG | 0.487376 | contig65end:-1585 | None:intergenic |
TCCAATCCATAATGATGTAC+CGG | 0.492547 | contig65end:-1622 | None:intergenic |
TCAGGAGAAGCAAATACAAC+AGG | 0.517061 | contig65end:-1567 | None:intergenic |
ATTGGATTAGTATTTCTAGT+GGG | 0.580331 | contig65end:+1639 | MsG0080049077.01.T01:CDS |
GATTGGATTAGTATTTCTAG+TGG | 0.595754 | contig65end:+1638 | MsG0080049077.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAATGTTGTATTTTC+CGG | + | contig65end:1603-1622 | MsG0080049077.01.T01:CDS | 15.0% |
!! | ACTTCATCCATTTTATTGAT+TGG | + | contig65end:1540-1559 | MsG0080049077.01.T01:CDS | 25.0% |
!!! | ATTGGATTAGTATTTCTAGT+GGG | + | contig65end:1639-1658 | MsG0080049077.01.T01:CDS | 25.0% |
AGGTACACCAATCAATAAAA+TGG | - | contig65end:1550-1569 | None:intergenic | 30.0% | |
! | TATTTTCCGGTACATCATTA+TGG | + | contig65end:1616-1635 | MsG0080049077.01.T01:CDS | 30.0% |
!! | GATTGGATTAGTATTTCTAG+TGG | + | contig65end:1638-1657 | MsG0080049077.01.T01:CDS | 30.0% |
TCCAATCCATAATGATGTAC+CGG | - | contig65end:1625-1644 | None:intergenic | 35.0% | |
TTATTACTTGACCAACCATC+AGG | - | contig65end:1588-1607 | None:intergenic | 35.0% | |
GTTGTATTTGCTTCTCCTGA+TGG | + | contig65end:1570-1589 | MsG0080049077.01.T01:CDS | 40.0% | |
TATTTGCTTCTCCTGATGGT+TGG | + | contig65end:1574-1593 | MsG0080049077.01.T01:CDS | 40.0% | |
TCAGGAGAAGCAAATACAAC+AGG | - | contig65end:1570-1589 | None:intergenic | 40.0% | |
TCCGGTACATCATTATGGAT+TGG | + | contig65end:1621-1640 | MsG0080049077.01.T01:CDS | 40.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
contig65end | gene | 1498 | 1686 | 1498 | ID=MsG0080049077.01;Name=MsG0080049077.01 |
contig65end | mRNA | 1498 | 1686 | 1498 | ID=MsG0080049077.01.T01;Parent=MsG0080049077.01;Name=MsG0080049077.01.T01;_AED=0.37;_eAED=0.37;_QI=0|-1|0|1|-1|0|1|0|62 |
contig65end | exon | 1498 | 1686 | 1498 | ID=MsG0080049077.01.T01:exon:42233;Parent=MsG0080049077.01.T01 |
contig65end | CDS | 1498 | 1686 | 1498 | ID=MsG0080049077.01.T01:cds;Parent=MsG0080049077.01.T01 |
Gene Sequence |
Protein sequence |