AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035828.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035828.01.T01 MTR_6g090180 88.811 429 43 2 181 604 6 434 0.0 775
MsG0680035828.01.T01 MTR_6g079810 57.757 419 157 12 202 608 53 463 2.49e-149 439
MsG0680035828.01.T01 MTR_6g086825 57.246 414 153 8 209 608 57 460 3.11e-146 431
MsG0680035828.01.T01 MTR_0054s0100 53.865 414 179 6 203 609 1 409 8.78e-142 418
MsG0680035828.01.T01 MTR_0054s0090 53.623 414 178 6 203 609 1 407 9.40e-141 415
MsG0680035828.01.T01 MTR_0134s0060 55.072 414 165 8 210 607 3 411 1.09e-139 412
MsG0680035828.01.T01 MTR_6g079770 54.374 423 172 8 203 609 1 418 2.33e-139 412
MsG0680035828.01.T01 MTR_4g028510 54.126 412 163 12 209 608 5 402 1.42e-131 394
MsG0680035828.01.T01 MTR_6g080680 54.115 401 155 7 209 601 9 388 2.59e-131 390
MsG0680035828.01.T01 MTR_4g028680 50.976 410 179 9 209 609 5 401 8.68e-125 374
MsG0680035828.01.T01 MTR_4g130330 52.696 408 158 13 216 608 4 391 7.40e-124 371
MsG0680035828.01.T01 MTR_6g478230 50.229 436 160 9 203 609 1 408 3.37e-123 370
MsG0680035828.01.T01 MTR_4g028660 49.877 405 180 11 209 604 5 395 1.22e-118 358
MsG0680035828.01.T01 MTR_4g027450 49.877 405 180 11 209 604 5 395 1.22e-118 358
MsG0680035828.01.T01 MTR_6g078010 53.371 356 132 8 256 603 1 330 1.29e-112 341
MsG0680035828.01.T01 MTR_4g028750 49.495 396 171 10 201 588 4 378 2.17e-112 342
MsG0680035828.01.T01 MTR_6g090250 49.873 393 165 10 239 603 31 419 2.62e-112 343
MsG0680035828.01.T01 MTR_5g097220 46.265 415 189 10 214 608 8 408 1.06e-103 320
MsG0680035828.01.T01 MTR_2g038680 45.519 424 193 14 206 607 3 410 5.58e-103 318
MsG0680035828.01.T01 MTR_0129s0070 46.377 414 196 10 203 608 1 396 2.87e-102 316
MsG0680035828.01.T01 MTR_5g097680 44.804 433 206 12 203 608 1 427 1.60e-100 312
MsG0680035828.01.T01 MTR_2g021800 44.780 431 196 12 203 607 1 415 3.23e-100 311
MsG0680035828.01.T01 MTR_2g022000 45.297 404 183 9 206 584 3 393 1.38e-99 310
MsG0680035828.01.T01 MTR_6g079790 51.692 325 123 6 303 609 2 310 3.65e-99 305
MsG0680035828.01.T01 MTR_4g102410 44.608 408 206 11 209 606 51 448 5.72e-99 309
MsG0680035828.01.T01 MTR_8g063440 42.680 403 209 8 209 609 2 384 1.01e-96 301
MsG0680035828.01.T01 MTR_5g097330 43.133 415 204 9 210 609 7 404 1.01e-95 299
MsG0680035828.01.T01 MTR_0129s0050 42.857 420 211 9 207 609 2 409 1.18e-95 299
MsG0680035828.01.T01 MTR_0129s0120 45.036 413 201 10 203 607 1 395 8.84e-95 296
MsG0680035828.01.T01 MTR_4g117550 42.718 412 191 11 203 608 1 373 1.27e-94 295
MsG0680035828.01.T01 MTR_2g021770 43.365 422 195 11 213 609 6 408 2.71e-94 296
MsG0680035828.01.T01 MTR_7g017130 43.269 416 207 10 203 608 1 397 2.86e-94 295
MsG0680035828.01.T01 MTR_7g069550 44.686 414 195 15 208 608 3 395 3.58e-93 292
MsG0680035828.01.T01 MTR_6g461660 43.855 415 201 12 203 604 1 396 5.11e-93 292
MsG0680035828.01.T01 MTR_2g021950 43.032 409 205 11 206 604 3 393 6.54e-93 291
MsG0680035828.01.T01 MTR_7g104710 50.898 334 103 7 203 523 1 286 4.98e-92 286
MsG0680035828.01.T01 MTR_7g017170 42.056 428 207 11 203 608 1 409 9.63e-91 286
MsG0680035828.01.T01 MTR_6g087620 51.274 314 110 6 291 597 1 278 2.41e-90 281
MsG0680035828.01.T01 MTR_5g037680 43.489 407 181 13 214 601 3 379 1.20e-89 285
MsG0680035828.01.T01 MTR_5g096630 41.687 415 221 8 209 609 8 415 1.34e-89 284
MsG0680035828.01.T01 MTR_1g007410 45.255 411 193 13 203 600 7 398 1.55e-89 283
MsG0680035828.01.T01 MTR_1g007450 43.766 393 202 10 209 594 2 382 2.31e-88 281
MsG0680035828.01.T01 MTR_7g023800 46.439 351 134 8 258 601 1 304 2.51e-87 274
MsG0680035828.01.T01 MTR_4g055820 44.474 371 178 9 208 564 3 359 1.60e-85 271
MsG0680035828.01.T01 MTR_2g104340 43.099 413 204 12 208 608 3 396 7.24e-85 271
MsG0680035828.01.T01 MTR_8g012090 43.342 383 160 9 203 577 1 334 1.05e-84 268
MsG0680035828.01.T01 MTR_7g017040 42.054 409 210 9 210 608 7 398 7.68e-84 268
MsG0680035828.01.T01 MTR_3g011120 41.878 394 190 12 213 598 8 370 1.11e-83 267
MsG0680035828.01.T01 MTR_5g069390 39.716 423 217 12 204 606 11 415 2.16e-83 270
MsG0680035828.01.T01 MTR_2g064950 43.005 386 179 11 213 582 4 364 6.13e-83 266
MsG0680035828.01.T01 MTR_5g059430 39.583 432 216 12 205 608 12 426 1.79e-82 265
MsG0680035828.01.T01 MTR_2g034700 42.714 398 188 12 211 601 5 369 2.25e-82 263
MsG0680035828.01.T01 MTR_2g066170 39.216 408 215 12 209 607 2 385 2.42e-82 264
MsG0680035828.01.T01 MTR_2g066200 39.709 413 212 12 209 609 2 389 2.77e-81 261
MsG0680035828.01.T01 MTR_4g014370 38.208 424 219 11 210 607 2 408 6.45e-81 261
MsG0680035828.01.T01 MTR_8g033140 38.813 438 208 14 205 609 9 419 7.36e-81 261
MsG0680035828.01.T01 MTR_8g041270 42.118 425 200 13 208 608 4 406 1.34e-80 260
MsG0680035828.01.T01 MTR_0831s0010 38.955 421 209 14 203 607 32 420 6.13e-80 259
MsG0680035828.01.T01 MTR_5g096910 41.849 411 203 12 209 607 6 392 7.17e-80 258
MsG0680035828.01.T01 MTR_8g064890 40.876 411 211 11 204 609 6 389 1.34e-79 257
MsG0680035828.01.T01 MTR_2g065860 40.342 409 215 12 209 609 2 389 1.77e-79 256
MsG0680035828.01.T01 MTR_5g092850 41.463 410 191 12 218 604 15 398 2.80e-79 256
MsG0680035828.01.T01 MTR_7g079640 42.078 385 180 12 208 584 3 352 4.67e-79 255
MsG0680035828.01.T01 MTR_5g064700 42.781 374 185 13 258 608 1 368 5.02e-79 254
MsG0680035828.01.T01 MTR_5g097350 42.010 388 185 12 228 604 25 383 5.20e-79 255
MsG0680035828.01.T01 MTR_5g024260 41.176 408 200 13 201 590 3 388 1.83e-78 254
MsG0680035828.01.T01 MTR_8g464770 40.102 394 205 10 213 601 6 373 8.27e-78 251
MsG0680035828.01.T01 MTR_2g065840 38.350 412 216 13 209 607 2 388 3.83e-77 250
MsG0680035828.01.T01 MTR_8g046310 39.903 411 193 15 209 604 3 374 1.20e-76 249
MsG0680035828.01.T01 MTR_8g467670 40.704 398 200 13 218 609 13 380 1.61e-76 249
MsG0680035828.01.T01 MTR_8g033090 39.671 426 200 12 216 608 11 412 1.67e-76 249
MsG0680035828.01.T01 MTR_2g104280 40.706 425 206 14 208 608 3 405 4.97e-76 248
MsG0680035828.01.T01 MTR_5g092860 43.169 366 152 12 238 584 21 349 2.69e-75 244
MsG0680035828.01.T01 MTR_5g072060 43.158 380 167 11 217 583 4 347 4.55e-75 251
MsG0680035828.01.T01 MTR_6g090260 64.171 187 63 3 421 603 73 259 8.40e-75 240
MsG0680035828.01.T01 MTR_6g090260 64.615 65 22 1 205 268 5 69 3.01e-17 82.4
MsG0680035828.01.T01 MTR_8g039500 40.426 376 186 12 209 577 2 346 2.57e-73 239
MsG0680035828.01.T01 MTR_5g074850 42.054 409 172 18 209 584 24 400 3.53e-73 253
MsG0680035828.01.T01 MTR_5g076490 44.865 370 153 13 256 608 1 336 8.28e-73 237
MsG0680035828.01.T01 MTR_2g066150 39.120 409 192 14 209 609 2 361 1.10e-72 238
MsG0680035828.01.T01 MTR_8g013000 42.350 366 183 10 213 566 4 353 1.00e-71 237
MsG0680035828.01.T01 MTR_6g070880 50.403 248 111 7 203 442 15 258 2.03e-70 228
MsG0680035828.01.T01 MTR_6g071420 50.403 248 111 7 203 442 15 258 2.03e-70 228
MsG0680035828.01.T01 MTR_8g046200 36.937 444 206 14 205 604 5 418 7.72e-70 232
MsG0680035828.01.T01 MTR_5g075370 41.089 404 171 18 216 584 5 376 1.38e-69 240
MsG0680035828.01.T01 MTR_7g111700 38.072 415 195 10 206 609 3 366 2.26e-69 229
MsG0680035828.01.T01 MTR_1g053510 38.499 413 221 10 209 603 4 401 4.38e-69 230
MsG0680035828.01.T01 MTR_1g007430 41.471 340 174 7 230 566 7 324 2.70e-68 225
MsG0680035828.01.T01 MTR_8g033110 38.228 429 220 14 209 608 3 415 7.75e-68 227
MsG0680035828.01.T01 MTR_5g074800 41.644 365 172 13 258 607 1 339 2.56e-67 223
MsG0680035828.01.T01 MTR_5g091140 40.000 395 190 16 201 582 30 390 4.03e-67 225
MsG0680035828.01.T01 MTR_8g064790 37.811 402 181 12 209 609 5 338 1.40e-65 218
MsG0680035828.01.T01 MTR_8g032980 35.973 442 221 14 205 609 6 422 7.06e-63 214
MsG0680035828.01.T01 MTR_8g018110 36.516 419 223 12 209 608 3 397 8.90e-63 213
MsG0680035828.01.T01 MTR_8g063330 36.685 368 199 12 209 563 2 348 1.23e-62 214
MsG0680035828.01.T01 MTR_8g046220 34.642 433 221 14 203 604 1 402 1.87e-62 212
MsG0680035828.01.T01 MTR_4g007940 38.710 341 164 12 286 605 23 339 9.41e-62 208
MsG0680035828.01.T01 MTR_1g098180 35.000 400 198 12 216 605 16 363 1.05e-58 201
MsG0680035828.01.T01 MTR_4g014370 32.048 415 192 10 201 607 4 336 1.25e-58 200
MsG0680035828.01.T01 MTR_7g016930 41.071 336 160 11 212 544 9 309 1.52e-58 199
MsG0680035828.01.T01 MTR_6g465360 48.548 241 105 8 204 431 47 281 1.97e-57 195
MsG0680035828.01.T01 MTR_5g022850 34.845 419 191 11 205 608 2 353 9.50e-57 195
MsG0680035828.01.T01 MTR_6g079730 67.164 134 44 0 470 603 12 145 2.39e-55 184
MsG0680035828.01.T01 MTR_5g096900 41.691 343 143 14 212 531 5 313 3.31e-55 190
MsG0680035828.01.T01 MTR_1g050308 34.314 408 184 13 206 609 21 348 4.05e-55 191
MsG0680035828.01.T01 MTR_8g063370 34.595 370 202 12 223 583 28 366 1.66e-54 191
MsG0680035828.01.T01 MTR_2g021920 45.082 244 104 8 380 604 37 269 2.67e-54 186
MsG0680035828.01.T01 MTR_5g043605 34.053 417 177 14 204 607 7 338 1.59e-51 182
MsG0680035828.01.T01 MTR_8g063310 32.360 411 235 16 203 600 9 389 1.72e-49 177
MsG0680035828.01.T01 MTR_5g086590 43.096 239 116 7 342 580 13 231 6.85e-49 171
MsG0680035828.01.T01 MTR_5g023970 47.423 194 100 2 417 609 5 197 1.14e-48 168
MsG0680035828.01.T01 MTR_3g018750 42.745 255 106 9 379 608 2 241 3.43e-48 169
MsG0680035828.01.T01 MTR_5g097820 39.502 281 135 10 210 476 10 269 2.48e-47 167
MsG0680035828.01.T01 MTR_5g094350 39.931 288 144 7 215 493 9 276 4.24e-47 167
MsG0680035828.01.T01 MTR_8g063350 33.071 381 179 12 211 582 6 319 1.82e-46 167
MsG0680035828.01.T01 MTR_6g004450 42.489 233 118 5 379 607 48 268 2.29e-46 165
MsG0680035828.01.T01 MTR_1g076810 35.077 325 167 8 209 527 8 294 1.57e-45 171
MsG0680035828.01.T01 MTR_1g050312 37.423 326 148 12 284 600 9 287 1.90e-45 163
MsG0680035828.01.T01 MTR_8g033000 34.646 381 203 15 256 608 1 363 3.74e-45 164
MsG0680035828.01.T01 MTR_5g097850 46.561 189 89 4 428 609 63 246 1.02e-43 157
MsG0680035828.01.T01 MTR_5g068490 36.218 312 156 11 300 609 8 278 1.37e-43 157
MsG0680035828.01.T01 MTR_4g016000 42.411 224 88 8 347 561 2 193 6.64e-43 154
MsG0680035828.01.T01 MTR_2g104260 39.041 292 142 9 208 482 3 275 1.39e-40 149
MsG0680035828.01.T01 MTR_8g096700 92.929 99 7 0 31 129 79 177 9.11e-39 145
MsG0680035828.01.T01 MTR_1g115205 39.552 268 107 11 203 462 17 237 8.51e-38 140
MsG0680035828.01.T01 MTR_5g066420 47.368 152 69 3 454 597 1 149 9.48e-38 137
MsG0680035828.01.T01 MTR_6g009350 41.463 205 90 8 380 571 8 195 1.28e-37 138
MsG0680035828.01.T01 MTR_8g035690 38.039 255 121 10 380 607 58 302 2.98e-36 138
MsG0680035828.01.T01 MTR_8g036970 47.273 165 77 4 423 586 147 302 3.46e-36 139
MsG0680035828.01.T01 MTR_8g036970 39.286 140 80 4 223 359 2 139 6.92e-19 89.4
MsG0680035828.01.T01 MTR_7g019250 38.235 238 107 8 356 584 206 412 6.08e-36 141
MsG0680035828.01.T01 MTR_5g037190 35.612 278 144 7 206 478 3 250 6.66e-36 135
MsG0680035828.01.T01 MTR_3g030620 42.857 168 87 5 446 606 15 180 7.19e-34 127
MsG0680035828.01.T01 MTR_4g094400 62.857 105 25 2 451 541 7 111 7.59e-34 125
MsG0680035828.01.T01 MTR_5g096920 44.805 154 80 4 454 606 1 150 2.70e-32 122
MsG0680035828.01.T01 MTR_7g017120 40.594 202 110 6 413 608 69 266 2.88e-32 125
MsG0680035828.01.T01 MTR_7g017150 42.105 190 102 5 423 608 82 267 3.59e-32 125
MsG0680035828.01.T01 MTR_1g047080 31.215 362 161 16 256 608 1 283 2.87e-31 124
MsG0680035828.01.T01 MTR_5g098950 36.327 245 107 7 333 566 68 274 8.02e-31 122
MsG0680035828.01.T01 MTR_8g073570 39.011 182 97 6 211 391 2 170 2.61e-29 114
MsG0680035828.01.T01 MTR_5g097660 47.368 114 59 1 492 604 3 116 2.18e-28 110
MsG0680035828.01.T01 MTR_4g116330 27.407 405 237 13 213 606 17 375 2.21e-28 117
MsG0680035828.01.T01 MTR_3g019290 36.797 231 89 8 203 429 1 178 7.37e-28 110
MsG0680035828.01.T01 MTR_3g099030 62.626 99 33 2 31 129 62 156 5.72e-27 110
MsG0680035828.01.T01 MTR_4g094365 26.329 414 242 14 203 606 1 361 1.03e-26 112
MsG0680035828.01.T01 MTR_4g133170 25.806 372 225 14 219 581 4 333 1.57e-26 112
MsG0680035828.01.T01 MTR_2g022020 45.763 118 62 2 487 604 1 116 2.08e-26 104
MsG0680035828.01.T01 MTR_5g097540 42.069 145 75 4 423 566 97 233 3.16e-26 109
MsG0680035828.01.T01 MTR_4g006650 59.596 99 37 1 29 127 193 288 5.13e-26 109
MsG0680035828.01.T01 MTR_3g099040 61.616 99 35 1 31 129 62 157 1.40e-25 107
MsG0680035828.01.T01 MTR_4g021785 25.248 404 226 12 218 606 8 350 1.16e-24 106
MsG0680035828.01.T01 MTR_0667s0010 26.463 393 226 17 215 581 2 357 1.52e-24 106
MsG0680035828.01.T01 MTR_7g101200 33.190 232 114 8 342 569 38 232 2.01e-24 102
MsG0680035828.01.T01 MTR_4g109270 26.601 406 226 12 219 606 8 359 6.50e-24 104
MsG0680035828.01.T01 MTR_5g097650 37.349 166 90 4 199 364 3 154 3.03e-23 97.1
MsG0680035828.01.T01 MTR_2g028140 26.546 388 233 17 219 581 5 365 5.87e-23 102
MsG0680035828.01.T01 MTR_2g028130 24.937 397 249 13 219 591 5 376 1.66e-22 100
MsG0680035828.01.T01 MTR_3g034130 25.191 393 227 14 214 585 4 350 1.71e-22 100
MsG0680035828.01.T01 MTR_5g036250 49.485 97 48 1 504 600 8 103 2.74e-22 95.1
MsG0680035828.01.T01 MTR_4g023080 24.112 394 242 10 218 606 8 349 3.13e-22 99.0
MsG0680035828.01.T01 MTR_3g083010 25.758 396 244 13 219 587 6 378 4.15e-22 99.8
MsG0680035828.01.T01 MTR_1g068835 25.333 375 225 17 219 581 4 335 4.69e-22 99.0
MsG0680035828.01.T01 MTR_8g013010 28.750 320 170 11 205 513 37 309 5.49e-22 97.4
MsG0680035828.01.T01 MTR_1g068860 25.594 379 233 16 219 587 4 343 8.86e-22 98.2
MsG0680035828.01.T01 MTR_2g028160 26.209 393 231 15 219 581 5 368 1.00e-21 98.6
MsG0680035828.01.T01 MTR_4g055060 27.083 336 196 13 219 546 30 324 6.43e-21 95.5
MsG0680035828.01.T01 MTR_2g426060 25.840 387 225 19 219 580 6 355 6.56e-21 95.9
MsG0680035828.01.T01 MTR_4g070550 24.548 387 241 13 219 583 5 362 8.60e-21 95.5
MsG0680035828.01.T01 MTR_5g086780 45.283 106 58 0 479 584 123 228 8.89e-21 92.0
MsG0680035828.01.T01 MTR_5g086780 58.333 60 23 1 206 263 3 62 7.01e-11 63.2
MsG0680035828.01.T01 MTR_4g117850 25.791 411 224 15 218 605 22 374 1.88e-20 94.0
MsG0680035828.01.T01 MTR_4g116330 25.926 405 204 15 213 606 17 336 2.20e-20 93.2
MsG0680035828.01.T01 MTR_2g425980 24.181 397 220 16 219 580 5 355 4.59e-19 90.1
MsG0680035828.01.T01 MTR_2g025420 24.824 427 245 20 219 609 6 392 5.85e-19 90.1
MsG0680035828.01.T01 MTR_8g101580 28.440 327 174 15 227 543 54 330 1.12e-18 89.0
MsG0680035828.01.T01 MTR_8g041440 44.898 98 36 1 211 308 7 86 1.35e-18 82.4
MsG0680035828.01.T01 MTR_1g097560 26.842 380 221 18 211 584 28 356 1.54e-18 88.2
MsG0680035828.01.T01 MTR_4g023130 25.378 331 150 9 218 544 8 245 1.88e-18 87.0
MsG0680035828.01.T01 MTR_3g103020 25.441 397 246 13 218 606 19 373 3.24e-18 87.4
MsG0680035828.01.T01 MTR_5g096050 44.037 109 50 2 454 551 1 109 3.34e-18 81.3
MsG0680035828.01.T01 MTR_5g096070 37.908 153 54 5 213 359 20 137 3.41e-18 82.4
MsG0680035828.01.T01 MTR_5g097210 25.316 395 241 16 218 604 8 356 5.85e-18 86.7
MsG0680035828.01.T01 MTR_3g034180 23.544 412 257 13 213 608 117 486 6.07e-18 87.4
MsG0680035828.01.T01 MTR_4g023090 25.294 340 209 11 210 544 4 303 6.20e-18 86.7
MsG0680035828.01.T01 MTR_5g091150 32.663 199 80 7 318 514 38 184 1.29e-17 82.0
MsG0680035828.01.T01 MTR_2g055970 26.393 341 206 10 206 543 198 496 1.80e-17 86.3
MsG0680035828.01.T01 MTR_5g070080 24.221 417 249 13 218 609 9 383 2.12e-17 85.1
MsG0680035828.01.T01 MTR_4g117720 27.797 295 169 12 324 605 110 373 2.24e-17 84.7
MsG0680035828.01.T01 MTR_2g031720 24.346 382 238 14 219 587 6 349 2.55e-17 84.7
MsG0680035828.01.T01 MTR_1g055135 27.441 379 197 18 218 569 12 339 2.69e-17 84.3
MsG0680035828.01.T01 MTR_2g026010 24.595 309 182 12 309 587 60 347 2.81e-17 84.7
MsG0680035828.01.T01 MTR_5g057790 26.453 344 181 14 219 546 46 333 2.97e-17 84.7
MsG0680035828.01.T01 MTR_1g097330 27.954 347 194 19 203 543 1 297 6.27e-17 84.0
MsG0680035828.01.T01 MTR_2g024100 24.938 405 228 16 233 607 21 379 6.63e-17 83.6
MsG0680035828.01.T01 MTR_6g087660 53.086 81 35 2 203 280 1 81 9.51e-17 79.3
MsG0680035828.01.T01 MTR_8g099460 24.694 409 239 19 219 607 5 364 1.21e-16 82.8
MsG0680035828.01.T01 MTR_8g102520 28.253 269 156 13 345 604 75 315 1.34e-16 81.6
MsG0680035828.01.T01 MTR_3g036290 25.648 347 199 12 219 562 22 312 1.97e-16 81.6
MsG0680035828.01.T01 MTR_4g122850 24.121 398 235 15 229 607 11 360 2.32e-16 81.6
MsG0680035828.01.T01 MTR_3g047580 38.519 135 59 5 216 350 11 121 2.32e-16 76.3
MsG0680035828.01.T01 MTR_5g070088 25.000 416 252 15 214 606 2 380 2.37e-16 81.6
MsG0680035828.01.T01 MTR_4g117770 24.561 399 245 13 218 606 10 362 4.83e-16 80.5
MsG0680035828.01.T01 MTR_4g117810 24.561 399 245 13 218 606 10 362 4.83e-16 80.5
MsG0680035828.01.T01 MTR_4g023120 24.771 327 204 11 219 543 3 289 4.96e-16 80.5
MsG0680035828.01.T01 MTR_4g109280 24.165 389 212 11 217 585 6 331 5.10e-16 80.5
MsG0680035828.01.T01 MTR_4g117780 24.495 396 247 12 219 606 11 362 2.31e-15 78.6
MsG0680035828.01.T01 MTR_3g014540 26.301 346 181 15 219 546 29 318 2.80e-15 78.6
MsG0680035828.01.T01 MTR_3g009240 25.263 380 224 17 219 593 36 360 3.36e-15 78.2
MsG0680035828.01.T01 MTR_3g013740 27.457 346 193 16 214 543 39 342 4.16e-15 78.2
MsG0680035828.01.T01 MTR_4g023440 28.302 265 142 11 204 465 7 226 6.74e-15 76.6
MsG0680035828.01.T01 MTR_2g025960 28.846 208 122 10 342 543 28 215 1.12e-14 75.9
MsG0680035828.01.T01 MTR_3g034160 24.455 413 252 16 213 608 3 372 1.72e-14 75.9
MsG0680035828.01.T01 MTR_7g070440 25.895 363 197 13 218 554 6 322 1.86e-14 75.9
MsG0680035828.01.T01 MTR_8g467140 26.364 330 196 11 218 543 31 317 2.12e-14 75.1
MsG0680035828.01.T01 MTR_2g031680 24.936 389 228 18 215 587 2 342 2.12e-14 75.9
MsG0680035828.01.T01 MTR_3g047540 47.126 87 37 4 422 507 5 83 3.03e-14 68.9
MsG0680035828.01.T01 MTR_1g097490 26.289 388 231 19 209 591 39 376 3.13e-14 75.1
MsG0680035828.01.T01 MTR_5g057710 25.364 343 186 14 219 546 46 333 3.22e-14 75.5
MsG0680035828.01.T01 MTR_2g026685 53.535 99 44 1 31 129 21 117 3.34e-14 72.8
MsG0680035828.01.T01 MTR_3g007410 26.994 326 184 16 227 544 60 339 4.22e-14 75.1
MsG0680035828.01.T01 MTR_7g407070 24.694 409 237 15 219 609 32 387 4.72e-14 74.7
MsG0680035828.01.T01 MTR_3g014570 25.654 382 216 19 219 587 29 355 4.92e-14 74.7
MsG0680035828.01.T01 MTR_1g037540 23.210 405 232 16 222 583 8 376 5.16e-14 74.7
MsG0680035828.01.T01 MTR_2g426090 25.067 375 239 15 227 587 14 360 5.30e-14 74.7
MsG0680035828.01.T01 MTR_4g023150 24.818 411 233 18 213 606 4 355 6.15e-14 73.9
MsG0680035828.01.T01 MTR_2g026685 52.475 101 46 1 29 129 59 157 7.86e-14 72.4
MsG0680035828.01.T01 MTR_2g026685 52.475 101 46 1 29 129 60 158 7.97e-14 72.4
MsG0680035828.01.T01 MTR_1g094210 25.989 354 197 16 198 543 36 332 8.76e-14 73.9
MsG0680035828.01.T01 MTR_3g006670 25.797 345 194 15 219 552 49 342 1.03e-13 73.9
MsG0680035828.01.T01 MTR_1g094210 26.197 355 195 17 198 543 36 332 1.08e-13 73.9
MsG0680035828.01.T01 MTR_1g050305 49.398 83 37 2 509 586 21 103 1.20e-13 68.9
MsG0680035828.01.T01 MTR_3g007360 26.462 325 187 14 227 544 60 339 2.31e-13 72.8
MsG0680035828.01.T01 MTR_2g021150 25.526 333 200 15 218 543 13 304 2.55e-13 72.4
MsG0680035828.01.T01 MTR_3g013770 26.741 359 192 17 219 562 33 335 3.10e-13 72.4
MsG0680035828.01.T01 MTR_3g007270 25.937 347 203 16 219 552 47 352 5.43e-13 71.6
MsG0680035828.01.T01 MTR_3g097190 50.000 54 27 0 528 581 28 81 7.12e-13 67.8
MsG0680035828.01.T01 MTR_2g046900 24.781 343 191 16 218 543 27 319 7.57e-13 70.9
MsG0680035828.01.T01 MTR_4g116340 27.273 264 135 9 218 475 35 247 9.62e-13 68.9
MsG0680035828.01.T01 MTR_4g118380 25.000 376 235 10 213 569 2 349 1.04e-12 70.5
MsG0680035828.01.T01 MTR_3g006530 22.928 362 226 14 219 573 40 355 2.22e-12 69.7
MsG0680035828.01.T01 MTR_2g031640 25.320 391 212 21 219 585 6 340 4.64e-12 68.6
MsG0680035828.01.T01 MTR_2g048580 23.768 345 174 13 213 538 2 276 6.77e-12 67.8
MsG0680035828.01.T01 MTR_8g090195 55.357 56 25 0 527 582 58 113 7.14e-12 63.2
MsG0680035828.01.T01 MTR_1g009110 24.425 348 216 13 208 544 3 314 8.40e-12 67.8
MsG0680035828.01.T01 MTR_6g027910 22.938 388 264 12 222 601 12 372 1.36e-11 67.0
MsG0680035828.01.T01 MTR_7g079370 23.103 290 192 11 324 604 82 349 2.06e-11 66.2
MsG0680035828.01.T01 MTR_4g023200 23.077 390 226 16 233 606 24 355 2.28e-11 66.2
MsG0680035828.01.T01 MTR_1g055195 24.834 302 169 11 316 604 215 471 3.71e-11 66.2
MsG0680035828.01.T01 MTR_5g094360 44.828 87 40 4 380 463 62 143 4.28e-11 62.0
MsG0680035828.01.T01 MTR_4g117430 30.864 162 80 6 343 502 14 145 4.39e-11 62.0
MsG0680035828.01.T01 MTR_3g011100 25.298 336 201 16 219 546 235 528 4.64e-11 66.2
MsG0680035828.01.T01 MTR_3g009260 24.929 353 207 17 222 570 44 342 5.29e-11 65.1
MsG0680035828.01.T01 MTR_8g040935 29.302 215 113 11 416 606 4 203 7.27e-11 62.4
MsG0680035828.01.T01 MTR_4g107820 24.260 338 195 12 215 543 32 317 8.67e-11 64.7
MsG0680035828.01.T01 MTR_4g107780 24.260 338 195 12 215 543 32 317 8.67e-11 64.7
MsG0680035828.01.T01 MTR_4g107820 24.260 338 195 12 215 543 32 317 8.87e-11 64.7
MsG0680035828.01.T01 MTR_2g021155 25.602 332 194 14 222 546 39 324 9.93e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035828.01.T01 AT5G50740 54.545 99 42 1 31 129 55 150 1.70e-28 112
MsG0680035828.01.T01 AT5G50740 54.545 99 42 1 31 129 62 157 1.84e-28 112
MsG0680035828.01.T01 AT5G50740 54.545 99 42 1 31 129 62 157 5.53e-24 102
MsG0680035828.01.T01 AT5G50740 54.545 99 42 1 31 129 55 150 9.68e-24 102
MsG0680035828.01.T01 AT5G50740 54.545 99 42 1 31 129 55 150 9.68e-24 102
MsG0680035828.01.T01 AT5G63530 70.707 99 27 2 31 129 86 182 5.09e-21 95.1
MsG0680035828.01.T01 AT5G63530 70.707 99 27 2 31 129 101 197 6.22e-21 95.1
MsG0680035828.01.T01 AT3G02960 42.424 99 47 1 31 129 64 152 1.22e-14 74.3
MsG0680035828.01.T01 AT3G16210 23.077 338 194 12 215 549 1 275 7.66e-12 67.8
MsG0680035828.01.T01 AT4G22390 22.500 320 198 13 285 580 50 343 1.36e-11 67.4
MsG0680035828.01.T01 AT4G22390 22.188 320 199 13 285 580 50 343 1.64e-11 67.0
MsG0680035828.01.T01 AT3G07870 25.519 337 207 15 219 545 28 330 9.43e-11 64.7

Find 125 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTGTTCTGAAGGTGGTTT+TGG 0.150297 6:+112916871 None:intergenic
ATTAGGGATTGATTTGAATT+TGG 0.152214 6:-112916291 MsG0680035828.01.T01:CDS
TTCTCAGGTCCCATCCTTTC+AGG 0.164802 6:-112916540 MsG0680035828.01.T01:intron
ACCGTTGTTTCTTGTCTTCA+TGG 0.187834 6:-112913270 MsG0680035828.01.T01:CDS
TGGACAAAACTCTTCGTTAT+TGG 0.201593 6:-112912781 MsG0680035828.01.T01:CDS
TCTCACAAGGTTGTTGTTAA+AGG 0.201668 6:-112916973 MsG0680035828.01.T01:CDS
TGTAATTCGTTTCATCTTGA+TGG 0.228408 6:-112913802 MsG0680035828.01.T01:CDS
AAATCTTCTTCAAATAGATT+TGG 0.237417 6:+112913468 None:intergenic
GGATTGAATAGATTGGTAAT+TGG 0.247123 6:+112913348 None:intergenic
CTTAAGTCTTTAAATCGATT+TGG 0.259480 6:-112913693 MsG0680035828.01.T01:CDS
ATAAACTTGGCGGTGTTAAA+TGG 0.269252 6:-112912886 MsG0680035828.01.T01:CDS
TTAGGGATTGATTTGAATTT+GGG 0.279300 6:-112916290 MsG0680035828.01.T01:CDS
CCCTTTGTCCCCATTCCAAT+GGG 0.297002 6:+112912736 None:intergenic
AGTAATGAGTTGAAGGGATT+AGG 0.303245 6:-112916308 MsG0680035828.01.T01:CDS
GTAATGAGTTGAAGGGATTA+GGG 0.310470 6:-112916307 MsG0680035828.01.T01:CDS
AATCTTCTTCAAATAGATTT+GGG 0.322006 6:+112913469 None:intergenic
TGCATCTCCAAGTATATCTT+TGG 0.337628 6:+112913161 None:intergenic
GATTGAATAGATTGGTAATT+GGG 0.345980 6:+112913349 None:intergenic
AAGCAAGCTCCTCAATCGTT+TGG 0.351270 6:+112912659 None:intergenic
CCCCTTTGTCCCCATTCCAA+TGG 0.352708 6:+112912735 None:intergenic
AATCGATTTAAAGACTTAAG+AGG 0.366623 6:+112913696 None:intergenic
GTTTCTTGTCTTCATGGCTT+TGG 0.369759 6:-112913264 MsG0680035828.01.T01:CDS
CACACATACCTCAGAAGAAT+AGG 0.379393 6:+112917120 None:intergenic
TAAGCTATATATCTCCCATA+TGG 0.383589 6:+112913128 None:intergenic
ATATGGATGGGTTCTGTCAT+TGG 0.392208 6:-112913032 MsG0680035828.01.T01:CDS
GGATGATCTGCAATTCCGTT+TGG 0.393696 6:+112917142 None:intergenic
GGAGGGCATCCAAGCGTATA+TGG 0.395585 6:-112913049 MsG0680035828.01.T01:CDS
ACGTTGAAGAGGAGGAGAAT+TGG 0.398612 6:-112916332 MsG0680035828.01.T01:CDS
CGTTGAAGAGGAGGAGAATT+GGG 0.402934 6:-112916331 MsG0680035828.01.T01:CDS
TCATAAACCCTTAGCATGAT+AGG 0.404567 6:+112913567 None:intergenic
CCGTGGTACATGTGACTATA+AGG 0.408263 6:-112913235 MsG0680035828.01.T01:CDS
GATGATCTGCAATTCCGTTT+GGG 0.412498 6:+112917143 None:intergenic
ACTCTTTCAAGAACCTTCAA+TGG 0.419505 6:+112916937 None:intergenic
CCCATTGGAATGGGGACAAA+GGG 0.419749 6:-112912736 MsG0680035828.01.T01:CDS
ATAGCTTAAGAAGTAATTCA+TGG 0.421433 6:-112913113 MsG0680035828.01.T01:CDS
GTTAAGTACCCCATTGGAAT+GGG 0.426020 6:-112912745 MsG0680035828.01.T01:CDS
GGTTTGGTGATGAAGTTTGC+TGG 0.429867 6:-112916423 MsG0680035828.01.T01:intron
TAAACTTGGCGGTGTTAAAT+GGG 0.436633 6:-112912885 MsG0680035828.01.T01:CDS
AATTGGGAGTAATGAGTTGA+AGG 0.439578 6:-112916315 MsG0680035828.01.T01:CDS
AGCAAGCTCCTCAATCGTTT+GGG 0.441782 6:+112912660 None:intergenic
AAAATAACCTTAGCAGCGTC+TGG 0.446307 6:+112913294 None:intergenic
ATGCACCTTTAGACCCCATA+TGG 0.446873 6:-112913143 MsG0680035828.01.T01:CDS
ATGTCAAATGATACCATGTT+TGG 0.454517 6:-112912995 MsG0680035828.01.T01:CDS
AAACAGCTTATTCGATTCCT+AGG 0.462601 6:-112917174 MsG0680035828.01.T01:CDS
CTCAACCGGACTGGGAGGAA+TGG 0.462772 6:+112913326 None:intergenic
ATCTCCCATATGGGGTCTAA+AGG 0.465292 6:+112913138 None:intergenic
CGTTAAGTACCCCATTGGAA+TGG 0.468037 6:-112912746 MsG0680035828.01.T01:CDS
TAACTACTTATTCCTCCAAT+CGG 0.470452 6:+112912583 None:intergenic
TCAACCGGACTGGGAGGAAT+GGG 0.470467 6:+112913327 None:intergenic
AGGAATGGGATTGAATAGAT+TGG 0.478606 6:+112913341 None:intergenic
AAGCTATATATCTCCCATAT+GGG 0.488133 6:+112913129 None:intergenic
AACAAAAGCATATTTCCGAT+TGG 0.488261 6:-112912598 MsG0680035828.01.T01:CDS
GGGAAAATTGATGATGGACT+TGG 0.488341 6:-112916270 MsG0680035828.01.T01:intron
ACACATACCTCAGAAGAATA+GGG 0.489219 6:+112917121 None:intergenic
TTGGATGCGTTCGTAAATCA+TGG 0.492437 6:-112913674 MsG0680035828.01.T01:CDS
GAATTTGGGAAAATTGATGA+TGG 0.493682 6:-112916276 MsG0680035828.01.T01:CDS
CAATCCCATTCCTCCCAGTC+CGG 0.493764 6:-112913331 MsG0680035828.01.T01:CDS
TTCACAAATTCCTGAAAGGA+TGG 0.498728 6:+112916530 None:intergenic
AAGAGAAGACTCAACCGGAC+TGG 0.499206 6:+112913317 None:intergenic
GGTTTATGATGCTGATCAAT+CGG 0.502885 6:-112913553 MsG0680035828.01.T01:CDS
TAGGTGCTCCGTCGTGATAA+CGG 0.504538 6:+112913586 None:intergenic
AAAAGCATATTTCCGATTGG+AGG 0.506284 6:-112912595 MsG0680035828.01.T01:CDS
TCTGGAAGAGAAGACTCAAC+CGG 0.509814 6:+112913312 None:intergenic
TTCTCTTCCAGACGCTGCTA+AGG 0.510078 6:-112913301 MsG0680035828.01.T01:CDS
TTTGAGCACCCAAACGATTG+AGG 0.517863 6:-112912668 MsG0680035828.01.T01:CDS
AACTCAGCGTGAAAGAATCA+TGG 0.522417 6:-112912801 MsG0680035828.01.T01:CDS
TTTGGTCTGGGTAGCAGCGA+TGG 0.523641 6:-112913429 MsG0680035828.01.T01:CDS
GGCATCCAAGCGTATATGGA+TGG 0.527186 6:-112913045 MsG0680035828.01.T01:CDS
GTGCCATCCAAAGATATACT+TGG 0.528017 6:-112913168 MsG0680035828.01.T01:CDS
CCCCATTGGAATGGGGACAA+AGG 0.533672 6:-112912737 MsG0680035828.01.T01:CDS
ATTGGGAGTAATGAGTTGAA+GGG 0.538748 6:-112916314 MsG0680035828.01.T01:CDS
AGAAATCTGCGACAAATGAA+AGG 0.538848 6:-112913770 MsG0680035828.01.T01:CDS
GGAAGAAAAGAAAGCTGAAG+AGG 0.538975 6:-112916812 MsG0680035828.01.T01:intron
TCTGCAATTCCGTTTGGGAT+CGG 0.544768 6:+112917148 None:intergenic
GATTTATAATTATGAAGATG+TGG 0.554215 6:-112917010 MsG0680035828.01.T01:CDS
GAAATCTGCGACAAATGAAA+GGG 0.554605 6:-112913769 MsG0680035828.01.T01:CDS
TCATCAACGTCTGAGGGTAT+CGG 0.554685 6:+112912934 None:intergenic
TCTTGCGTTAAGTACCCCAT+TGG 0.554919 6:-112912751 MsG0680035828.01.T01:CDS
GCCGGGTTATTTATATTGTG+AGG 0.558640 6:-112913070 MsG0680035828.01.T01:CDS
AAAACAATCATCAACGTCTG+AGG 0.563980 6:+112912927 None:intergenic
AGAATCACTATCATAACCTT+AGG 0.564388 6:+112916703 None:intergenic
CCGTTTGGGATCGGTGACCT+AGG 0.564915 6:+112917157 None:intergenic
AACCAATGTGGCTTAACTGT+CGG 0.565086 6:-112912633 MsG0680035828.01.T01:CDS
CCTAGGTCACCGATCCCAAA+CGG 0.565361 6:-112917157 MsG0680035828.01.T01:CDS
ACGGAGCACCTATCATGCTA+AGG 0.567058 6:-112913575 MsG0680035828.01.T01:CDS
AGAACCCATCCATATACGCT+TGG 0.572843 6:+112913040 None:intergenic
CATGGCTTTGGTTATGACCG+TGG 0.574250 6:-112913252 MsG0680035828.01.T01:CDS
GGTTATTTATATTGTGAGGA+GGG 0.574448 6:-112913066 MsG0680035828.01.T01:CDS
AGAGAAGACTCAACCGGACT+GGG 0.578930 6:+112913318 None:intergenic
AAAGGACGACGTTGAAGAGG+AGG 0.579877 6:-112916340 MsG0680035828.01.T01:CDS
TAAAGCAAAGTGGATAAACT+TGG 0.581314 6:-112912899 MsG0680035828.01.T01:CDS
ATCCGACAGTTAAGCCACAT+TGG 0.582490 6:+112912631 None:intergenic
TGCACCTTTAGACCCCATAT+GGG 0.582528 6:-112913142 MsG0680035828.01.T01:CDS
GAAAGAGAAACCTAAGCCAG+AGG 0.586865 6:-112916833 MsG0680035828.01.T01:CDS
GTGAAAGGACGACGTTGAAG+AGG 0.587276 6:-112916343 MsG0680035828.01.T01:CDS
AGACGCATTGAGAAAATCAA+AGG 0.589980 6:-112916637 MsG0680035828.01.T01:intron
ATTCTTGCAAAATTACATTG+TGG 0.591375 6:-112913374 MsG0680035828.01.T01:CDS
CAGTTTGTGTAGAATAGAGA+AGG 0.594149 6:+112913719 None:intergenic
AAACAATCATCAACGTCTGA+GGG 0.594342 6:+112912928 None:intergenic
AGGACGACGTTGATTGTGAA+AGG 0.596660 6:-112916358 MsG0680035828.01.T01:CDS
GGGTTATTTATATTGTGAGG+AGG 0.601641 6:-112913067 MsG0680035828.01.T01:CDS
GCATCCAAGCGTATATGGAT+GGG 0.607749 6:-112913044 MsG0680035828.01.T01:CDS
AGCAAAGTGGATAAACTTGG+CGG 0.608900 6:-112912896 MsG0680035828.01.T01:CDS
CGGAGCACCTATCATGCTAA+GGG 0.608916 6:-112913574 MsG0680035828.01.T01:CDS
ACAGTTCACAAATTCCTGAA+AGG 0.610116 6:+112916526 None:intergenic
AGATCATCCCTATTCTTCTG+AGG 0.615527 6:-112917128 MsG0680035828.01.T01:intron
TACTGATTGCAAATCTCACA+AGG 0.615533 6:-112916986 MsG0680035828.01.T01:CDS
TCTCCAAGTATATCTTTGGA+TGG 0.616809 6:+112913165 None:intergenic
TCACAAATTCCTGAAAGGAT+GGG 0.617431 6:+112916531 None:intergenic
TCCTCACAATATAAATAACC+CGG 0.618548 6:+112913069 None:intergenic
AGTTAGATATGAAATTGTTG+CGG 0.639181 6:+112913613 None:intergenic
AGGTTCTTGAAAGAGTTCAG+AGG 0.645167 6:-112916930 MsG0680035828.01.T01:CDS
AAGTCAAATGATACCAAACA+TGG 0.646952 6:+112912982 None:intergenic
AGCTATATATCTCCCATATG+GGG 0.647728 6:+112913130 None:intergenic
CATTGGAATGGGGACAAAGG+GGG 0.648124 6:-112912734 MsG0680035828.01.T01:CDS
CCTTTGTCCCCATTCCAATG+GGG 0.659428 6:+112912737 None:intergenic
CCATTGGAATGGGGACAAAG+GGG 0.659791 6:-112912735 MsG0680035828.01.T01:CDS
TTAAGTACCCCATTGGAATG+GGG 0.665054 6:-112912744 MsG0680035828.01.T01:CDS
AACTCTCACCGTTATCACGA+CGG 0.673243 6:-112913594 MsG0680035828.01.T01:CDS
TGAAACGAATTACAGTACAA+TGG 0.673807 6:+112913811 None:intergenic
AGCTTGCTTATAAACCAATG+TGG 0.674747 6:-112912645 MsG0680035828.01.T01:CDS
ATAGAGAAGGCAATATCATG+AGG 0.674906 6:+112913732 None:intergenic
GAAGACTCAACCGGACTGGG+AGG 0.687538 6:+112913321 None:intergenic
GCCATGAAGACAAGAAACAA+CGG 0.691863 6:+112913269 None:intergenic
CCTTATAGTCACATGTACCA+CGG 0.721804 6:+112913235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAATTATAATATG+GGG - Chr6:112915402-112915421 MsG0680035828.01.T01:intron 10.0%
!!! ATTTTTAAGTATATTTTCTA+TGG + Chr6:112915619-112915638 None:intergenic 10.0%
!!! TTTATTTTTCTCAAAATTAT+AGG + Chr6:112915697-112915716 None:intergenic 10.0%
!! AATCCAAAATAAAAAACATA+TGG + Chr6:112913644-112913663 None:intergenic 15.0%
!! ATGAAATTATTATTGTTAGA+TGG + Chr6:112914569-112914588 None:intergenic 15.0%
!!! AAATCATTACACATTTATTT+TGG - Chr6:112914592-112914611 MsG0680035828.01.T01:intron 15.0%
!!! ATTCCATATGTTTTTTATTT+TGG - Chr6:112913638-112913657 MsG0680035828.01.T01:CDS 15.0%
!!! TAACCTATTTTTTTTTTTTG+AGG - Chr6:112915763-112915782 MsG0680035828.01.T01:intron 15.0%
!!! TTCTTTTTTACTATTTTTTG+TGG - Chr6:112915875-112915894 MsG0680035828.01.T01:intron 15.0%
!!! TTTAACAATTTTCAGATTTT+TGG - Chr6:112916319-112916338 MsG0680035828.01.T01:CDS 15.0%
!! AAACCAAAATAATTGTCTAA+TGG + Chr6:112914460-112914479 None:intergenic 20.0%
!! AAACCAAACTAATTGTTTAA+TGG + Chr6:112913800-112913819 None:intergenic 20.0%
!! AAACCATAATTATGGTTTAA+TGG + Chr6:112914503-112914522 None:intergenic 20.0%
!! AAACCATTAAACAATTAGTT+TGG - Chr6:112913794-112913813 MsG0680035828.01.T01:CDS 20.0%
!! AAACCATTAAACCATAATTA+TGG - Chr6:112914497-112914516 MsG0680035828.01.T01:intron 20.0%
!! AAATCATTAGATGTACTTAA+TGG + Chr6:112913697-112913716 None:intergenic 20.0%
!! AAATCTTCTTCAAATAGATT+TGG + Chr6:112916301-112916320 None:intergenic 20.0%
!! AATCTTCTTCAAATAGATTT+GGG + Chr6:112916300-112916319 None:intergenic 20.0%
!! AATTAAAATTAGGAGGAATT+TGG + Chr6:112915907-112915926 None:intergenic 20.0%
!! ATGCCTCAAAAAAAAAAAAT+AGG + Chr6:112915769-112915788 None:intergenic 20.0%
!! CAAAACAGTGAATTAAAATT+AGG + Chr6:112915917-112915936 None:intergenic 20.0%
!! GATTTATAATTATGAAGATG+TGG - Chr6:112912756-112912775 MsG0680035828.01.T01:CDS 20.0%
!! TATTACTGAAACCATAATTA+TGG + Chr6:112914511-112914530 None:intergenic 20.0%
!!! AAACCATTAGACAATTATTT+TGG - Chr6:112914454-112914473 MsG0680035828.01.T01:intron 20.0%
!!! AATAAGTTGTTTTGAATAAG+CGG - Chr6:112914987-112915006 MsG0680035828.01.T01:intron 20.0%
!!! CTTATTGATTAATTCACATT+AGG - Chr6:112914065-112914084 MsG0680035828.01.T01:intron 20.0%
!!! GATGTTTTGTATTTTTTTTC+TGG - Chr6:112916241-112916260 MsG0680035828.01.T01:intron 20.0%
!!! GTCGTTTTTTAAAATGAAAT+CGG - Chr6:112915089-112915108 MsG0680035828.01.T01:intron 20.0%
!!! TTAAGTACATCTAATGATTT+TGG - Chr6:112913697-112913716 MsG0680035828.01.T01:CDS 20.0%
!!! TTTATTTCATTCACTTGTTT+TGG - Chr6:112913198-112913217 MsG0680035828.01.T01:CDS 20.0%
!!! TTTTACTATTTTTTGTGGTT+TGG - Chr6:112915880-112915899 MsG0680035828.01.T01:intron 20.0%
!!! TTTTGTTACATATAGATGAT+GGG - Chr6:112913313-112913332 MsG0680035828.01.T01:CDS 20.0%
!!! TTTTTCATTATATGAGAGTA+AGG + Chr6:112916914-112916933 None:intergenic 20.0%
!!! TTTTTGTTACATATAGATGA+TGG - Chr6:112913312-112913331 MsG0680035828.01.T01:CDS 20.0%
! AAATTTATCTGAATCTGTGA+TGG - Chr6:112913003-112913022 MsG0680035828.01.T01:CDS 25.0%
! AACAGTGAATTAAAATTAGG+AGG + Chr6:112915914-112915933 None:intergenic 25.0%
! AGAAATTGTCGAAATCAAAT+TGG - Chr6:112913523-112913542 MsG0680035828.01.T01:CDS 25.0%
! AGCTTAATTCTAATAAGTAG+AGG + Chr6:112915494-112915513 None:intergenic 25.0%
! AGTTAGATATGAAATTGTTG+CGG + Chr6:112916156-112916175 None:intergenic 25.0%
! ATAGCTTAAGAAGTAATTCA+TGG - Chr6:112916653-112916672 MsG0680035828.01.T01:CDS 25.0%
! ATTAGAATTAAGCTTTCACT+TGG - Chr6:112915500-112915519 MsG0680035828.01.T01:intron 25.0%
! ATTCTTGCAAAATTACATTG+TGG - Chr6:112916392-112916411 MsG0680035828.01.T01:CDS 25.0%
! CTTAAGTCTTTAAATCGATT+TGG - Chr6:112916073-112916092 MsG0680035828.01.T01:intron 25.0%
! CTTATTCGAAACAACTTATT+AGG + Chr6:112914855-112914874 None:intergenic 25.0%
! GAAAAGATAAAAAACTAGCT+TGG - Chr6:112917070-112917089 MsG0680035828.01.T01:intron 25.0%
! GAAATTGTCGAAATCAAATT+GGG - Chr6:112913524-112913543 MsG0680035828.01.T01:CDS 25.0%
! GAATTCAAACACAAAATCAT+CGG + Chr6:112913271-112913290 None:intergenic 25.0%
! TAAATATAATCGCGCTTTAA+TGG + Chr6:112913973-112913992 None:intergenic 25.0%
! TATAAGTGTGTACTATTAAG+TGG - Chr6:112914089-112914108 MsG0680035828.01.T01:intron 25.0%
! TTAGAATTAAGCTTTCACTT+GGG - Chr6:112915501-112915520 MsG0680035828.01.T01:intron 25.0%
!! AAACCATTTTCAATGCAAAA+TGG - Chr6:112914352-112914371 MsG0680035828.01.T01:intron 25.0%
!! AAACCATTTTGCATTGAAAA+TGG + Chr6:112914358-112914377 None:intergenic 25.0%
!! AATAAGTTGCTTTGAATAAG+CGG - Chr6:112915300-112915319 MsG0680035828.01.T01:intron 25.0%
!! AATCGATTTAAAGACTTAAG+AGG + Chr6:112916073-112916092 None:intergenic 25.0%
!! GAGATTTCAATTTTGAATTG+CGG - Chr6:112912710-112912729 MsG0680035828.01.T01:CDS 25.0%
!! GATTGAATAGATTGGTAATT+GGG + Chr6:112916420-112916439 None:intergenic 25.0%
!! TATTACAAAACCATTTTCAC+TGG - Chr6:112914151-112914170 MsG0680035828.01.T01:intron 25.0%
!! TTTTCAATGCAAAATGGTTT+TGG - Chr6:112914358-112914377 MsG0680035828.01.T01:intron 25.0%
!! TTTTCTATGGTATATGTAGA+CGG + Chr6:112915606-112915625 None:intergenic 25.0%
!!! AATTTTCAGATTTTTGGTCT+GGG - Chr6:112916325-112916344 MsG0680035828.01.T01:CDS 25.0%
!!! ATTAGGGATTGATTTGAATT+TGG - Chr6:112913475-112913494 MsG0680035828.01.T01:CDS 25.0%
!!! ATTGTTTAATGGTTTTGCTA+TGG + Chr6:112913789-112913808 None:intergenic 25.0%
!!! ATTTTTTTCTCTTGTTCTGA+AGG + Chr6:112912907-112912926 None:intergenic 25.0%
!!! GTTGCTTTTTAAAATGAGAT+CGG - Chr6:112915259-112915278 MsG0680035828.01.T01:intron 25.0%
!!! GTTGTTTTGCATAAATATGT+TGG - Chr6:112915039-112915058 MsG0680035828.01.T01:intron 25.0%
!!! GTTTTGAAAATGTTCTGTTA+TGG - Chr6:112913608-112913627 MsG0680035828.01.T01:CDS 25.0%
!!! TCTTGATTTTTGGAAGAAAA+AGG - Chr6:112913388-112913407 MsG0680035828.01.T01:CDS 25.0%
!!! TTAAGTGGACTTTGAAATTT+GGG - Chr6:112915456-112915475 MsG0680035828.01.T01:intron 25.0%
!!! TTAGGGATTGATTTGAATTT+GGG - Chr6:112913476-112913495 MsG0680035828.01.T01:CDS 25.0%
!!! TTGTTTAATGGTTTTGCTAT+GGG + Chr6:112913788-112913807 None:intergenic 25.0%
!!! TTTAAGTGGACTTTGAAATT+TGG - Chr6:112915455-112915474 MsG0680035828.01.T01:intron 25.0%
AAAAGAAAAACACACTAACC+AGG + Chr6:112915862-112915881 None:intergenic 30.0%
AAACCATAAGTGTGGTTTAA+TGG + Chr6:112913843-112913862 None:intergenic 30.0%
AAACCATTAAACCACACTTA+TGG - Chr6:112913837-112913856 MsG0680035828.01.T01:intron 30.0%
AAGCTATATATCTCCCATAT+GGG + Chr6:112916640-112916659 None:intergenic 30.0%
AAGTCAAATGATACCAAACA+TGG + Chr6:112916787-112916806 None:intergenic 30.0%
AGAATCACTATCATAACCTT+AGG + Chr6:112913066-112913085 None:intergenic 30.0%
ATGTCAAATGATACCATGTT+TGG - Chr6:112916771-112916790 MsG0680035828.01.T01:intron 30.0%
GAATTTGGGAAAATTGATGA+TGG - Chr6:112913490-112913509 MsG0680035828.01.T01:CDS 30.0%
GGTTATTTATATTGTGAGGA+GGG - Chr6:112916700-112916719 MsG0680035828.01.T01:CDS 30.0%
GTGTAGAAAACAATTATGCT+CGG - Chr6:112915546-112915565 MsG0680035828.01.T01:intron 30.0%
GTGTAGAAAGCAATTATGTT+AGG - Chr6:112915524-112915543 MsG0680035828.01.T01:intron 30.0%
GTTAGAGAGATAAATGAGTA+TGG + Chr6:112914722-112914741 None:intergenic 30.0%
TAAAGCAAAGTGGATAAACT+TGG - Chr6:112916867-112916886 MsG0680035828.01.T01:CDS 30.0%
TAACTACTTATTCCTCCAAT+CGG + Chr6:112917186-112917205 None:intergenic 30.0%
TAAGCTATATATCTCCCATA+TGG + Chr6:112916641-112916660 None:intergenic 30.0%
TAGAATTAAGCTTTCACTTG+GGG - Chr6:112915502-112915521 MsG0680035828.01.T01:intron 30.0%
TATTACTGAAACCATAAGTG+TGG + Chr6:112913851-112913870 None:intergenic 30.0%
TCCAAAAATCAAGAATGCAA+AGG + Chr6:112913382-112913401 None:intergenic 30.0%
TCCTCACAATATAAATAACC+CGG + Chr6:112916700-112916719 None:intergenic 30.0%
TGAAACGAATTACAGTACAA+TGG + Chr6:112915958-112915977 None:intergenic 30.0%
TGTAATTCGTTTCATCTTGA+TGG - Chr6:112915964-112915983 MsG0680035828.01.T01:intron 30.0%
TGTTGCTAAGAATTCAAAGT+TGG - Chr6:112913570-112913589 MsG0680035828.01.T01:CDS 30.0%
TGTTGTTAAAGGAGAAAAAG+CGG - Chr6:112912804-112912823 MsG0680035828.01.T01:CDS 30.0%
TTTCTATGGTATATGTAGAC+GGG + Chr6:112915605-112915624 None:intergenic 30.0%
TTTGGGCAAAATTACACAAT+TGG + Chr6:112915648-112915667 None:intergenic 30.0%
! AAAACCATTTTCACTGGAAT+TGG - Chr6:112914157-112914176 MsG0680035828.01.T01:intron 30.0%
! AAACCATTTTCACTGCAAAA+TGG - Chr6:112914309-112914328 MsG0680035828.01.T01:intron 30.0%
! AAACCATTTTCACTGGAATT+GGG - Chr6:112914158-112914177 MsG0680035828.01.T01:intron 30.0%
! AAACCATTTTGCAGTGAAAA+TGG + Chr6:112914315-112914334 None:intergenic 30.0%
! AACAAAAGCATATTTCCGAT+TGG - Chr6:112917168-112917187 MsG0680035828.01.T01:CDS 30.0%
! AATATGGGGCTTTAATTTAG+TGG - Chr6:112915416-112915435 MsG0680035828.01.T01:intron 30.0%
! ATATGGGGCTTTAATTTAGT+GGG - Chr6:112915417-112915436 MsG0680035828.01.T01:intron 30.0%
! GGATTGAATAGATTGGTAAT+TGG + Chr6:112916421-112916440 None:intergenic 30.0%
! TAAGTGTGGTTTAATGGTTT+TGG + Chr6:112913837-112913856 None:intergenic 30.0%
! TCCTTTGCATTCTTGATTTT+TGG - Chr6:112913378-112913397 MsG0680035828.01.T01:CDS 30.0%
! TTTTCAAAACCATCAGATTC+AGG + Chr6:112913598-112913617 None:intergenic 30.0%
! TTTTCACTGCAAAATGGTTT+TGG - Chr6:112914315-112914334 MsG0680035828.01.T01:intron 30.0%
!! ATATAGATGATGGGTTTGAT+TGG - Chr6:112913322-112913341 MsG0680035828.01.T01:CDS 30.0%
!! ATTGTCTAATGGTTTTGCTA+TGG + Chr6:112914449-112914468 None:intergenic 30.0%
!! GTTTTGATGTTAAAGCAAAG+TGG - Chr6:112916857-112916876 MsG0680035828.01.T01:CDS 30.0%
!! TAAGTGGACTTTGAAATTTG+GGG - Chr6:112915457-112915476 MsG0680035828.01.T01:intron 30.0%
!! TGTGTTGTTTATGATCAATC+CGG - Chr6:112914257-112914276 MsG0680035828.01.T01:intron 30.0%
!!! CAATTTTCAGATTTTTGGTC+TGG - Chr6:112916324-112916343 MsG0680035828.01.T01:CDS 30.0%
!!! TAGGTTAGCGTTTTTTTAGT+AGG + Chr6:112915750-112915769 None:intergenic 30.0%
!!! TGTATTTTTTTTCTGGTCAG+AGG - Chr6:112916248-112916267 MsG0680035828.01.T01:intron 30.0%
AAAACAATCATCAACGTCTG+AGG + Chr6:112916842-112916861 None:intergenic 35.0%
AAACAATCATCAACGTCTGA+GGG + Chr6:112916841-112916860 None:intergenic 35.0%
AAACAGCTTATTCGATTCCT+AGG - Chr6:112912592-112912611 MsG0680035828.01.T01:CDS 35.0%
AAACCATTTCCACAGCAAAA+TGG - Chr6:112913734-112913753 MsG0680035828.01.T01:CDS 35.0%
ACACATACCTCAGAAGAATA+GGG + Chr6:112912648-112912667 None:intergenic 35.0%
ACAGTTCACAAATTCCTGAA+AGG + Chr6:112913243-112913262 None:intergenic 35.0%
ACTCTTTCAAGAACCTTCAA+TGG + Chr6:112912832-112912851 None:intergenic 35.0%
AGAAATCTGCGACAAATGAA+AGG - Chr6:112915996-112916015 MsG0680035828.01.T01:intron 35.0%
AGACGCATTGAGAAAATCAA+AGG - Chr6:112913129-112913148 MsG0680035828.01.T01:CDS 35.0%
AGCTATATATCTCCCATATG+GGG + Chr6:112916639-112916658 None:intergenic 35.0%
AGGAATGGGATTGAATAGAT+TGG + Chr6:112916428-112916447 None:intergenic 35.0%
ATAGAGAAGGCAATATCATG+AGG + Chr6:112916037-112916056 None:intergenic 35.0%
CAACAAACAAATCGATAACC+TGG - Chr6:112915841-112915860 MsG0680035828.01.T01:intron 35.0%
CAGTTTGTGTAGAATAGAGA+AGG + Chr6:112916050-112916069 None:intergenic 35.0%
GAAATAAAAGAGACATGACG+AGG - Chr6:112914024-112914043 MsG0680035828.01.T01:intron 35.0%
GAAATCTGCGACAAATGAAA+GGG - Chr6:112915997-112916016 MsG0680035828.01.T01:intron 35.0%
GATTGTGATATGCATCATGT+TGG - Chr6:112913660-112913679 MsG0680035828.01.T01:CDS 35.0%
GGGTTATTTATATTGTGAGG+AGG - Chr6:112916699-112916718 MsG0680035828.01.T01:CDS 35.0%
GGTTTATGATGCTGATCAAT+CGG - Chr6:112916213-112916232 MsG0680035828.01.T01:intron 35.0%
TCACAAATTCCTGAAAGGAT+GGG + Chr6:112913238-112913257 None:intergenic 35.0%
TCATAAACCCTTAGCATGAT+AGG + Chr6:112916202-112916221 None:intergenic 35.0%
TCTCCAAGTATATCTTTGGA+TGG + Chr6:112916604-112916623 None:intergenic 35.0%
TGAAATCTGTTGGTATAAGC+TGG - Chr6:112914194-112914213 MsG0680035828.01.T01:intron 35.0%
TGATTCGATGTGAAATCTGT+TGG - Chr6:112914184-112914203 MsG0680035828.01.T01:intron 35.0%
TGCATCTCCAAGTATATCTT+TGG + Chr6:112916608-112916627 None:intergenic 35.0%
TGGACAAAACTCTTCGTTAT+TGG - Chr6:112916985-112917004 MsG0680035828.01.T01:CDS 35.0%
TGTTGGTATAAGCTGGAATT+CGG - Chr6:112914201-112914220 MsG0680035828.01.T01:intron 35.0%
TGTTTATGATCAATCCGGTT+CGG - Chr6:112914262-112914281 MsG0680035828.01.T01:intron 35.0%
TTATTATATGGTGCAGCCTA+AGG - Chr6:112913047-112913066 MsG0680035828.01.T01:CDS 35.0%
TTCACAAATTCCTGAAAGGA+TGG + Chr6:112913239-112913258 None:intergenic 35.0%
TTTCCCAATTCCAGTGAAAA+TGG + Chr6:112914164-112914183 None:intergenic 35.0%
! AAAAGCATATTTCCGATTGG+AGG - Chr6:112917171-112917190 MsG0680035828.01.T01:CDS 35.0%
! AATTGGGAGTAATGAGTTGA+AGG - Chr6:112913451-112913470 MsG0680035828.01.T01:CDS 35.0%
! AGCTTGCTTATAAACCAATG+TGG - Chr6:112917121-112917140 MsG0680035828.01.T01:intron 35.0%
! AGTAATGAGTTGAAGGGATT+AGG - Chr6:112913458-112913477 MsG0680035828.01.T01:CDS 35.0%
! ATAAACTTGGCGGTGTTAAA+TGG - Chr6:112916880-112916899 MsG0680035828.01.T01:CDS 35.0%
! ATTGGGAGTAATGAGTTGAA+GGG - Chr6:112913452-112913471 MsG0680035828.01.T01:CDS 35.0%
! GTAATGAGTTGAAGGGATTA+GGG - Chr6:112913459-112913478 MsG0680035828.01.T01:CDS 35.0%
! GTTTCAAAACCATTTTGCTG+TGG + Chr6:112914407-112914426 None:intergenic 35.0%
! TAAACTTGGCGGTGTTAAAT+GGG - Chr6:112916881-112916900 MsG0680035828.01.T01:CDS 35.0%
! TACTGATTGCAAATCTCACA+AGG - Chr6:112912780-112912799 MsG0680035828.01.T01:CDS 35.0%
! TCTCACAAGGTTGTTGTTAA+AGG - Chr6:112912793-112912812 MsG0680035828.01.T01:CDS 35.0%
! TTTCCACAGCAAAATGGTTT+TGG - Chr6:112913740-112913759 MsG0680035828.01.T01:CDS 35.0%
!! AAACCATTTTGCTGTGGAAA+TGG + Chr6:112913740-112913759 None:intergenic 35.0%
!! AAACTTGATTTTGACATGCC+GGG - Chr6:112916679-112916698 MsG0680035828.01.T01:CDS 35.0%
!! GAAACTTGATTTTGACATGC+CGG - Chr6:112916678-112916697 MsG0680035828.01.T01:CDS 35.0%
!! TAATGGTTTTGCTATGGCTA+TGG + Chr6:112914443-112914462 None:intergenic 35.0%
!! TAATGGTTTTGCTATGGGTA+TGG + Chr6:112913783-112913802 None:intergenic 35.0%
!! TTTAATTTAGTGGGCTTGGT+GGG - Chr6:112915426-112915445 MsG0680035828.01.T01:intron 35.0%
!!! CTTGTTTTGGTTCAATTCTC+AGG - Chr6:112913211-112913230 MsG0680035828.01.T01:CDS 35.0%
!!! TTTTTCTCTTGTTCTGAAGG+TGG + Chr6:112912904-112912923 None:intergenic 35.0%
AAAATAACCTTAGCAGCGTC+TGG + Chr6:112916475-112916494 None:intergenic 40.0%
AACCAATGTGGCTTAACTGT+CGG - Chr6:112917133-112917152 MsG0680035828.01.T01:CDS 40.0%
AACTCAGCGTGAAAGAATCA+TGG - Chr6:112916965-112916984 MsG0680035828.01.T01:CDS 40.0%
AGAAAAAGCGGATCCATTGA+AGG - Chr6:112912816-112912835 MsG0680035828.01.T01:CDS 40.0%
AGATCATCCCTATTCTTCTG+AGG - Chr6:112912638-112912657 MsG0680035828.01.T01:CDS 40.0%
AGCAAAGTGGATAAACTTGG+CGG - Chr6:112916870-112916889 MsG0680035828.01.T01:CDS 40.0%
AGGTTCTTGAAAGAGTTCAG+AGG - Chr6:112912836-112912855 MsG0680035828.01.T01:CDS 40.0%
CACACATACCTCAGAAGAAT+AGG + Chr6:112912649-112912668 None:intergenic 40.0%
CCTTATAGTCACATGTACCA+CGG + Chr6:112916534-112916553 None:intergenic 40.0%
GATGATCTGCAATTCCGTTT+GGG + Chr6:112912626-112912645 None:intergenic 40.0%
GCCATGAAGACAAGAAACAA+CGG + Chr6:112916500-112916519 None:intergenic 40.0%
GCCGGGTTATTTATATTGTG+AGG - Chr6:112916696-112916715 MsG0680035828.01.T01:CDS 40.0%
GGAAGAAAAGAAAGCTGAAG+AGG - Chr6:112912954-112912973 MsG0680035828.01.T01:CDS 40.0%
GTGCCATCCAAAGATATACT+TGG - Chr6:112916598-112916617 MsG0680035828.01.T01:intron 40.0%
GTTAAGTACCCCATTGGAAT+GGG - Chr6:112917021-112917040 MsG0680035828.01.T01:intron 40.0%
GTTTCTTGTCTTCATGGCTT+TGG - Chr6:112916502-112916521 MsG0680035828.01.T01:intron 40.0%
TGACGAGGCTTTACAAAAAG+TGG - Chr6:112914039-112914058 MsG0680035828.01.T01:intron 40.0%
TTAAGTACCCCATTGGAATG+GGG - Chr6:112917022-112917041 MsG0680035828.01.T01:intron 40.0%
TTGGATGCGTTCGTAAATCA+TGG - Chr6:112916092-112916111 MsG0680035828.01.T01:intron 40.0%
! ACTCCAAAACCATTTTGCTG+TGG + Chr6:112913746-112913765 None:intergenic 40.0%
! ATATGGATGGGTTCTGTCAT+TGG - Chr6:112916734-112916753 MsG0680035828.01.T01:intron 40.0%
! TCAGCTTTCTTTTCTTCCTC+TGG + Chr6:112912952-112912971 None:intergenic 40.0%
! TCTGGTGTTAGCATTACTCA+CGG - Chr6:112914286-112914305 MsG0680035828.01.T01:intron 40.0%
!! ACAATTATGCTCGGTGCATA+AGG - Chr6:112915555-112915574 MsG0680035828.01.T01:intron 40.0%
!! ACCGTTGTTTCTTGTCTTCA+TGG - Chr6:112916496-112916515 MsG0680035828.01.T01:intron 40.0%
!! CTTTAATTTAGTGGGCTTGG+TGG - Chr6:112915425-112915444 MsG0680035828.01.T01:intron 40.0%
!! GATGATGGGTTTGATTGGTT+TGG - Chr6:112913327-112913346 MsG0680035828.01.T01:CDS 40.0%
!! GGGAAAATTGATGATGGACT+TGG - Chr6:112913496-112913515 MsG0680035828.01.T01:CDS 40.0%
!! TTCTTTTCTTCCTCTGGCTT+AGG + Chr6:112912946-112912965 None:intergenic 40.0%
!!! CTTGTTCTGAAGGTGGTTTT+GGG + Chr6:112912897-112912916 None:intergenic 40.0%
!!! TCTTGTTCTGAAGGTGGTTT+TGG + Chr6:112912898-112912917 None:intergenic 40.0%
!!! TGGTTTTGGAGTACAACTCA+CGG - Chr6:112913754-112913773 MsG0680035828.01.T01:CDS 40.0%
!!! TGGTTTTGGAGTCTAACTCA+CGG - Chr6:112914329-112914348 MsG0680035828.01.T01:intron 40.0%
!!! TTGGTGGGAGCTTTTTTAAG+TGG - Chr6:112915441-112915460 MsG0680035828.01.T01:intron 40.0%
AACTCTCACCGTTATCACGA+CGG - Chr6:112916172-112916191 MsG0680035828.01.T01:intron 45.0%
AAGCAAGCTCCTCAATCGTT+TGG + Chr6:112917110-112917129 None:intergenic 45.0%
ACGTTGAAGAGGAGGAGAAT+TGG - Chr6:112913434-112913453 MsG0680035828.01.T01:CDS 45.0%
AGAACCCATCCATATACGCT+TGG + Chr6:112916729-112916748 None:intergenic 45.0%
AGCAAGCTCCTCAATCGTTT+GGG + Chr6:112917109-112917128 None:intergenic 45.0%
ATCCGACAGTTAAGCCACAT+TGG + Chr6:112917138-112917157 None:intergenic 45.0%
ATCTCCCATATGGGGTCTAA+AGG + Chr6:112916631-112916650 None:intergenic 45.0%
ATGCACCTTTAGACCCCATA+TGG - Chr6:112916623-112916642 MsG0680035828.01.T01:intron 45.0%
ATGGTATATGTAGACGGGTG+TGG + Chr6:112915600-112915619 None:intergenic 45.0%
CCGTGGTACATGTGACTATA+AGG - Chr6:112916531-112916550 MsG0680035828.01.T01:CDS 45.0%
CGTTAAGTACCCCATTGGAA+TGG - Chr6:112917020-112917039 MsG0680035828.01.T01:intron 45.0%
CGTTGAAGAGGAGGAGAATT+GGG - Chr6:112913435-112913454 MsG0680035828.01.T01:CDS 45.0%
GAAAGAGAAACCTAAGCCAG+AGG - Chr6:112912933-112912952 MsG0680035828.01.T01:CDS 45.0%
GCATCCAAGCGTATATGGAT+GGG - Chr6:112916722-112916741 MsG0680035828.01.T01:intron 45.0%
GGATGATCTGCAATTCCGTT+TGG + Chr6:112912627-112912646 None:intergenic 45.0%
TATGTAGACGGGTGTGGTTA+TGG + Chr6:112915594-112915613 None:intergenic 45.0%
TCTGGAAGAGAAGACTCAAC+CGG + Chr6:112916457-112916476 None:intergenic 45.0%
TCTTGCGTTAAGTACCCCAT+TGG - Chr6:112917015-112917034 MsG0680035828.01.T01:intron 45.0%
TGCACCTTTAGACCCCATAT+GGG - Chr6:112916624-112916643 MsG0680035828.01.T01:intron 45.0%
TGGCTATGGTTTCTGTGAGT+TGG + Chr6:112914429-112914448 None:intergenic 45.0%
TTTGAGCACCCAAACGATTG+AGG - Chr6:112917098-112917117 MsG0680035828.01.T01:intron 45.0%
! AGGACGACGTTGATTGTGAA+AGG - Chr6:112913408-112913427 MsG0680035828.01.T01:CDS 45.0%
! TCATCAACGTCTGAGGGTAT+CGG + Chr6:112916835-112916854 None:intergenic 45.0%
! TCTGCAATTCCGTTTGGGAT+CGG + Chr6:112912621-112912640 None:intergenic 45.0%
!! AAGTTGGTGCCTGAATCTGA+TGG - Chr6:112913586-112913605 MsG0680035828.01.T01:CDS 45.0%
!! GGGCTTTAATTTAGTGGGCT+TGG - Chr6:112915422-112915441 MsG0680035828.01.T01:intron 45.0%
!! GGTTTGGTGATGAAGTTTGC+TGG - Chr6:112913343-112913362 MsG0680035828.01.T01:CDS 45.0%
!!! TCTGAAGGTGGTTTTGGGAT+CGG + Chr6:112912892-112912911 None:intergenic 45.0%
!! TAAGAAAAAAATTATAATAT+GGG - Chr6:112915401-112915420 MsG0680035828.01.T01:intron 5.0%
!! TTAAGAAAAAAATTATAATA+TGG - Chr6:112915400-112915419 MsG0680035828.01.T01:intron 5.0%
!!! AAATAAATTATATTATCTTT+TGG + Chr6:112915666-112915685 None:intergenic 5.0%
!!! AATAAATTATATTATCTTTT+GGG + Chr6:112915665-112915684 None:intergenic 5.0%
!!! ATCATTTTTATTTTATTATA+TGG - Chr6:112913035-112913054 MsG0680035828.01.T01:CDS 5.0%
AAAGGACGACGTTGAAGAGG+AGG - Chr6:112913426-112913445 MsG0680035828.01.T01:CDS 50.0%
AAGAGAAGACTCAACCGGAC+TGG + Chr6:112916452-112916471 None:intergenic 50.0%
AGAGAAGACTCAACCGGACT+GGG + Chr6:112916451-112916470 None:intergenic 50.0%
CATTGGAATGGGGACAAAGG+GGG - Chr6:112917032-112917051 MsG0680035828.01.T01:intron 50.0%
CCATTGGAATGGGGACAAAG+GGG - Chr6:112917031-112917050 MsG0680035828.01.T01:intron 50.0%
CCCATTGGAATGGGGACAAA+GGG - Chr6:112917030-112917049 MsG0680035828.01.T01:intron 50.0%
CCCTTTGTCCCCATTCCAAT+GGG + Chr6:112917033-112917052 None:intergenic 50.0%
CCTTTGTCCCCATTCCAATG+GGG + Chr6:112917032-112917051 None:intergenic 50.0%
GGCATCCAAGCGTATATGGA+TGG - Chr6:112916721-112916740 MsG0680035828.01.T01:intron 50.0%
GGGTGTGGTTATGGTGCATA+AGG + Chr6:112915585-112915604 None:intergenic 50.0%
GTGAAAGGACGACGTTGAAG+AGG - Chr6:112913423-112913442 MsG0680035828.01.T01:CDS 50.0%
TAGGTGCTCCGTCGTGATAA+CGG + Chr6:112916183-112916202 None:intergenic 50.0%
TGCTAACACCAGATCCGAAC+CGG + Chr6:112914279-112914298 None:intergenic 50.0%
TTCTCAGGTCCCATCCTTTC+AGG - Chr6:112913226-112913245 MsG0680035828.01.T01:CDS 50.0%
TTCTCTTCCAGACGCTGCTA+AGG - Chr6:112916465-112916484 MsG0680035828.01.T01:intron 50.0%
! ACGGAGCACCTATCATGCTA+AGG - Chr6:112916191-112916210 MsG0680035828.01.T01:intron 50.0%
! CGGAGCACCTATCATGCTAA+GGG - Chr6:112916192-112916211 MsG0680035828.01.T01:intron 50.0%
!! CATGGCTTTGGTTATGACCG+TGG - Chr6:112916514-112916533 MsG0680035828.01.T01:intron 50.0%
!! TGATCAATCCGGTTCGGATC+TGG - Chr6:112914268-112914287 MsG0680035828.01.T01:intron 50.0%
CAATCCCATTCCTCCCAGTC+CGG - Chr6:112916435-112916454 MsG0680035828.01.T01:intron 55.0%
CCCCATTGGAATGGGGACAA+AGG - Chr6:112917029-112917048 MsG0680035828.01.T01:intron 55.0%
CCCCTTTGTCCCCATTCCAA+TGG + Chr6:112917034-112917053 None:intergenic 55.0%
CCTAGGTCACCGATCCCAAA+CGG - Chr6:112912609-112912628 MsG0680035828.01.T01:CDS 55.0%
TTTGGTCTGGGTAGCAGCGA+TGG - Chr6:112916337-112916356 MsG0680035828.01.T01:CDS 55.0%
! TCAACCGGACTGGGAGGAAT+GGG + Chr6:112916442-112916461 None:intergenic 55.0%
!! GGAGGGCATCCAAGCGTATA+TGG - Chr6:112916717-112916736 MsG0680035828.01.T01:intron 55.0%
! CCGTTTGGGATCGGTGACCT+AGG + Chr6:112912612-112912631 None:intergenic 60.0%
! CTCAACCGGACTGGGAGGAA+TGG + Chr6:112916443-112916462 None:intergenic 60.0%
! GAAGACTCAACCGGACTGGG+AGG + Chr6:112916448-112916467 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 112912582 112917206 112912582 ID=MsG0680035828.01;Name=MsG0680035828.01
Chr6 mRNA 112912582 112917206 112912582 ID=MsG0680035828.01.T01;Parent=MsG0680035828.01;Name=MsG0680035828.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0|0|0.5|1|1|6|0|609
Chr6 exon 112917129 112917206 112917129 ID=MsG0680035828.01.T01:exon:9785;Parent=MsG0680035828.01.T01
Chr6 exon 112916813 112917031 112916813 ID=MsG0680035828.01.T01:exon:9784;Parent=MsG0680035828.01.T01
Chr6 exon 112916638 112916725 112916638 ID=MsG0680035828.01.T01:exon:9783;Parent=MsG0680035828.01.T01
Chr6 exon 112916528 112916555 112916528 ID=MsG0680035828.01.T01:exon:9782;Parent=MsG0680035828.01.T01
Chr6 exon 112916271 112916430 112916271 ID=MsG0680035828.01.T01:exon:9781;Parent=MsG0680035828.01.T01
Chr6 exon 112912582 112913838 112912582 ID=MsG0680035828.01.T01:exon:9780;Parent=MsG0680035828.01.T01
Chr6 CDS 112917129 112917206 112917129 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Chr6 CDS 112916813 112917031 112916813 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Chr6 CDS 112916638 112916725 112916638 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Chr6 CDS 112916528 112916555 112916528 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Chr6 CDS 112916271 112916430 112916271 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Chr6 CDS 112912582 112913838 112912582 ID=MsG0680035828.01.T01:cds;Parent=MsG0680035828.01.T01
Gene Sequence

>MsG0680035828.01.T01

TATTTTGCACAAACAGCTTATTCGATTCCTAGGTCACCGATCCCAAACGGAATTGCAGATCATCCCTATTCTTCTGAGATTTATAATTATGAAGATGTGGTTACTGATTGCAAATCTCACAAGGTTGTTGTTAAAGGAGAAAAAGCGGATCCATTGAAGGTTCTTGAAAGAGTTCAGAGGAAGAGTCATAGACAAGTTGAGCTTCTTTCTCCGATCCCAAAACCACCTTCAGAACAAGAGAAAAAAATTGAAGAGAAAGAGAAACCTAAGCCAGAGGAAGAAAAGAAAGCTGAAGAGCCTAAGGTTATGATAGTGATTCTGAAAGTTCACATGTATTGTGAAGCTTGTTCACAAGAAATCAAGAGACGCATTGAGAAAATCAAAGGTCCCATCCTTTCAGGAATTTGTGAACTTTTGCTGGAGATTTTCAATTTCCTTTGCATTCTTGATTTTTGGAAGAAAAAGGACGACGTTGATTGTGAAAGGACGACGTTGAAGAGGAGGAGAATTGGGAGTAATGAGTTGAAGGGATTAGGGATTGATTTGAATTTGGGAAAATTGATGATGGACTTGCTTTACCATTGTACTGTAATTCGTTTCATCTTGATGGAGAATAAGAAGAAATCTGCGACAAATGAAAGGGTAAGCAAGTATATACCTCATGATATTGCCTTCTCTATTCTACACAAACTGCCTCTTAAGTCTTTAAATCGATTTGGATGCGTTCGTAAATCATGGTCTCTCTTGTTACAAGACACTCGTTTCATGAACATGTTCCGCAACAATTTCATATCTAACTCTCACCGTTATCACGACGGAGCACCTATCATGCTAAGGGTTTATGATGCTGATCAATCGGAGCAAGATGTTTTGTATTTTTTTTCTGGTCAGAGGTTTGAGAATAAAATCAAATTAGATTGCCCAAATCTATTTGAAGAAGATTTTAACAATTTTCAGATTTTTGGTCTGGGTAGCAGCGATGGCACTCTTTGTCTTCATGAACTAATTGAACTAAATTCTTGCAAAATTACATTGTGGAACCCAATTACCAATCTATTCAATCCCATTCCTCCCAGTCCGGTTGAGTCTTCTCTTCCAGACGCTGCTAAGGTTATTTTCACCGTTGTTTCTTGTCTTCATGGCTTTGGTTATGACCGTGGTACATGTGACTATAAGGTCATTCGTCGTGTACACTTACGATGTGATGACAATCTTGAATACGTGCCATCCAAAGATATACTTGGAGATGCACCTTTAGACCCCATATGGGAGATATATAGCTTAAGAAGTAATTCATGGAAGAAACTTGATTTTGACATGCCGGGTTATTTATATTGTGAGGAGGGCATCCAAGCGTATATGGATGGGTTCTGTCATTGGTTGTGCAAACATAGATGTCAAATGATACCATGTTTGGTATCATTTGACTTAAGCAATGATGTGTTCTTCAAAACACCGATACCCTCAGACGTTGATGATTGTTTTGATGTTAAAGCAAAGTGGATAAACTTGGCGGTGTTAAATGGGTTCATTGCCTTACTCTCATATAATGAAAAAACTACAACTTTTCACATATCAATTTTGAACGAACTCAGCGTGAAAGAATCATGGACAAAACTCTTCGTTATTGGATCGATGTCTTGCGTTAAGTACCCCATTGGAATGGGGACAAAGGGGGAAATATTCTTCATAAGAAAAGATAAAAAACTAGCTTGGTTTGATTTGAGCACCCAAACGATTGAGGAGCTTGCTTATAAACCAATGTGGCTTAACTGTCGGATAATAATTTACAACAAAAGCATATTTCCGATTGGAGGAATAAGTAGTTAA

Protein sequence

>MsG0680035828.01.T01

YFAQTAYSIPRSPIPNGIADHPYSSEIYNYEDVVTDCKSHKVVVKGEKADPLKVLERVQRKSHRQVELLSPIPKPPSEQEKKIEEKEKPKPEEEKKAEEPKVMIVILKVHMYCEACSQEIKRRIEKIKGPILSGICELLLEIFNFLCILDFWKKKDDVDCERTTLKRRRIGSNELKGLGIDLNLGKLMMDLLYHCTVIRFILMENKKKSATNERVSKYIPHDIAFSILHKLPLKSLNRFGCVRKSWSLLLQDTRFMNMFRNNFISNSHRYHDGAPIMLRVYDADQSEQDVLYFFSGQRFENKIKLDCPNLFEEDFNNFQIFGLGSSDGTLCLHELIELNSCKITLWNPITNLFNPIPPSPVESSLPDAAKVIFTVVSCLHGFGYDRGTCDYKVIRRVHLRCDDNLEYVPSKDILGDAPLDPIWEIYSLRSNSWKKLDFDMPGYLYCEEGIQAYMDGFCHWLCKHRCQMIPCLVSFDLSNDVFFKTPIPSDVDDCFDVKAKWINLAVLNGFIALLSYNEKTTTFHISILNELSVKESWTKLFVIGSMSCVKYPIGMGTKGEIFFIRKDKKLAWFDLSTQTIEELAYKPMWLNCRIIIYNKSIFPIGGISS*