AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048987.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048987.01.T01 MTR_4g016930 97.119 243 7 0 54 296 55 297 3.70e-175 486
MsG0080048987.01.T01 MTR_7g079520 41.860 129 71 2 169 296 52 177 2.65e-28 107
MsG0080048987.01.T01 MTR_4g088905 47.368 114 53 2 182 295 147 253 6.28e-26 107
MsG0080048987.01.T01 MTR_4g088905 35.758 165 87 7 132 290 334 485 2.28e-21 94.0
MsG0080048987.01.T01 MTR_4g088905 40.385 104 59 1 187 290 277 377 1.15e-19 89.0
MsG0080048987.01.T01 MTR_2g103130 35.417 96 59 1 195 290 55 147 4.23e-18 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048987.01.T01 AT2G38270 70.124 241 66 1 54 294 58 292 2.10e-128 367
MsG0080048987.01.T01 AT3G54900 43.966 116 58 2 179 290 51 163 3.77e-26 102
MsG0080048987.01.T01 AT4G04950 46.535 101 51 1 195 295 153 250 3.63e-23 99.4
MsG0080048987.01.T01 AT4G04950 41.667 96 53 1 195 290 390 482 1.59e-20 91.7
MsG0080048987.01.T01 AT4G04950 40.000 100 57 1 191 290 279 375 3.08e-17 82.0
MsG0080048987.01.T01 AT3G15660 37.500 104 62 1 192 295 62 162 4.59e-20 85.5
MsG0080048987.01.T01 AT3G15660 37.500 104 62 1 192 295 62 162 4.59e-20 85.5

Find 7 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTGCATACCTATTTAA+TGG 0.176016 contig585end:-13825 MsG0080048987.01.T01:exon
CGAGGGGTGCCCTGCACATT+TGG 0.319575 contig585end:-13776 MsG0080048987.01.T01:intron
GTTGATAATGAGTTAATTCA+AGG 0.394554 contig585end:-13863 MsG0080048987.01.T01:exon
TTGCATACCTATTTAATGGC+TGG 0.420740 contig585end:-13821 MsG0080048987.01.T01:exon
GACTATAGTACCAAATGTGC+AGG 0.462369 contig585end:+13766 MsG0080048986.01.T01:intergenic
TGCAGGGCACCCCTCGCCCC+CGG 0.509079 contig585end:+13783 MsG0080048986.01.T01:intergenic
ACTATAGTACCAAATGTGCA+GGG 0.696051 contig585end:+13767 MsG0080048986.01.T01:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCTTTTAAATTAAATTCA+AGG - contig585end:13932-13951 MsG0080048987.01.T01:exon 10.0%
!!! TTCTTTTAAATTAAATTCAA+GGG - contig585end:13933-13952 MsG0080048987.01.T01:exon 10.0%
!! AAATCTCAAATCTTAAATTA+TGG + contig585end:10991-11010 MsG0080048987.01.T01:intergenic 15.0%
!! AATCTCAAATCTTAAATTAT+GGG + contig585end:10990-11009 MsG0080048987.01.T01:intergenic 15.0%
!! TTGGTTATTTAATTGTAAAT+TGG - contig585end:11886-11905 MsG0080048987.01.T01:intron 15.0%
!! TGTAATATACAAACAGTATT+TGG - contig585end:13148-13167 MsG0080048987.01.T01:intron 20.0%
!!! AAATACCTTTGAAAAGATAA+AGG + contig585end:12130-12149 MsG0080048987.01.T01:intergenic 20.0%
!!! CAATTGGTCTTAAATTATTT+TGG - contig585end:10961-10980 MsG0080048987.01.T01:intron 20.0%
!!! TAATATAAAAATTTGAGACG+AGG + contig585end:10755-10774 MsG0080048987.01.T01:intergenic 20.0%
!!! TAATTGTTTAGAACAATTTG+TGG - contig585end:11739-11758 MsG0080048987.01.T01:intron 20.0%
!!! TTGTGTAATTTAACCTATTT+TGG + contig585end:10915-10934 MsG0080048987.01.T01:intergenic 20.0%
!!! TTTGTAAATTTTATTGCAGT+AGG - contig585end:11843-11862 MsG0080048987.01.T01:intron 20.0%
! AAAATCTCCAAAAGAAATTG+TGG + contig585end:12879-12898 MsG0080048987.01.T01:intergenic 25.0%
! AAAATGCAGAAAAAGACATA+TGG + contig585end:13104-13123 MsG0080048987.01.T01:intergenic 25.0%
! AAATCTCCAAAAGAAATTGT+GGG + contig585end:12878-12897 MsG0080048987.01.T01:intergenic 25.0%
! AAATGCAGAAAAAGACATAT+GGG + contig585end:13103-13122 MsG0080048987.01.T01:intergenic 25.0%
! AAATTGTCTACTATATAGGT+TGG - contig585end:13294-13313 MsG0080048987.01.T01:intron 25.0%
! AATTGTCTACTATATAGGTT+GGG - contig585end:13295-13314 MsG0080048987.01.T01:intron 25.0%
! AATTTGATCCAATTTCATTG+TGG - contig585end:11986-12005 MsG0080048987.01.T01:intron 25.0%
! ACAATGAAAAATTCATCATC+AGG + contig585end:13273-13292 MsG0080048987.01.T01:intergenic 25.0%
! ACTTGTGTATTTCAAAATTC+AGG + contig585end:11824-11843 MsG0080048987.01.T01:intergenic 25.0%
! ATCATCAGGAAAGTAATATT+TGG + contig585end:13259-13278 MsG0080048987.01.T01:intergenic 25.0%
! ATTTGAAAAGTCTCAAATCA+TGG + contig585end:13039-13058 MsG0080048987.01.T01:intergenic 25.0%
! ATTTGATCCAATTTCATTGT+GGG - contig585end:11987-12006 MsG0080048987.01.T01:intron 25.0%
! CAAAAAGTAATTAATTGTGC+CGG - contig585end:13806-13825 MsG0080048987.01.T01:exon 25.0%
! CTTAGGAATTAATCCAAAAT+AGG - contig585end:10899-10918 MsG0080048987.01.T01:intron 25.0%
! TCGGATACAAAATATTGATA+CGG - contig585end:11102-11121 MsG0080048987.01.T01:intron 25.0%
! TGTGAAATTGTCTACTATAT+AGG - contig585end:13290-13309 MsG0080048987.01.T01:intron 25.0%
! TGTTTGTATATTACATCTGT+AGG + contig585end:13143-13162 MsG0080048987.01.T01:intergenic 25.0%
! TTGGATGAAGATTATAACTA+TGG - contig585end:13654-13673 MsG0080048987.01.T01:CDS 25.0%
!! AAAAACAAGCATTGTAAACA+CGG + contig585end:10436-10455 MsG0080048987.01.T01:intergenic 25.0%
!! AAAATTTCATTTTGAGCCAT+TGG - contig585end:10875-10894 MsG0080048987.01.T01:intron 25.0%
!! AAATTTCATTTTGAGCCATT+GGG - contig585end:10876-10895 MsG0080048987.01.T01:intron 25.0%
!! AAGATTATAACTATGGATTG+AGG - contig585end:13661-13680 MsG0080048987.01.T01:CDS 25.0%
!! ACAAGTGATATTTAAGTTTG+AGG - contig585end:10931-10950 MsG0080048987.01.T01:intron 25.0%
!! AGATTATAACTATGGATTGA+GGG - contig585end:13662-13681 MsG0080048987.01.T01:CDS 25.0%
!! AGTTTGAGGTTTATAACAAT+TGG - contig585end:10945-10964 MsG0080048987.01.T01:intron 25.0%
!! GTGAAAAGTTTGCTTTAATT+TGG - contig585end:12171-12190 MsG0080048987.01.T01:intron 25.0%
!!! CAGCCATTTTTTTTTTGAAT+CGG + contig585end:10610-10629 MsG0080048987.01.T01:intergenic 25.0%
!!! GTTGATAATGAGTTAATTCA+AGG - contig585end:10077-10096 MsG0080048987.01.T01:exon 25.0%
!!! TTATGGGTGTTTTATTTTGA+GGG - contig585end:10369-10388 MsG0080048987.01.T01:CDS 25.0%
!!! TTGCCGATTCAAAAAAAAAA+TGG - contig585end:10604-10623 MsG0080048987.01.T01:CDS 25.0%
!!! TTTGTCTTATGTTGGTTTTT+GGG - contig585end:10239-10258 MsG0080048987.01.T01:CDS 25.0%
!!! TTTTTGAAATTTTCCCGTAT+TGG + contig585end:11144-11163 MsG0080048987.01.T01:intergenic 25.0%
AAAAATATCTGAGGGAATGT+AGG + contig585end:13714-13733 MsG0080048986.01.T01:intergenic 30.0%
AACTGAGAATCTTACCTTAA+CGG + contig585end:11639-11658 MsG0080048987.01.T01:intergenic 30.0%
ACTTCTTCAACACAATAAGT+GGG - contig585end:12792-12811 MsG0080048987.01.T01:intron 30.0%
AGAAAAACCAGCCATTAAAT+AGG + contig585end:10129-10148 MsG0080048987.01.T01:intergenic 30.0%
AGATAAGTTGTGTAGAAGAA+AGG + contig585end:11275-11294 MsG0080048987.01.T01:intergenic 30.0%
AGTAACTAAGTTCGTAGAAA+TGG + contig585end:12056-12075 MsG0080048987.01.T01:intergenic 30.0%
AGTTACCAAAATAATTCCAC+TGG - contig585end:11182-11201 MsG0080048987.01.T01:intron 30.0%
ATTGTCTACTATATAGGTTG+GGG - contig585end:13296-13315 MsG0080048987.01.T01:intron 30.0%
CACCATTCAAAAATATCTGA+GGG + contig585end:13722-13741 MsG0080048987.01.T01:intergenic 30.0%
CGATTCAAAAAAAAAATGGC+TGG - contig585end:10608-10627 MsG0080048987.01.T01:CDS 30.0%
CTCAAATCTTAAATTATGGG+TGG + contig585end:10987-11006 MsG0080048987.01.T01:intergenic 30.0%
GTAACTAAGTTCGTAGAAAT+GGG + contig585end:12055-12074 MsG0080048987.01.T01:intergenic 30.0%
GTATAACAGTCTTAAAGAGT+TGG - contig585end:11867-11886 MsG0080048987.01.T01:intron 30.0%
TCACCATTCAAAAATATCTG+AGG + contig585end:13723-13742 MsG0080048987.01.T01:intergenic 30.0%
TTCAGTTCTTTGTCTTATGT+TGG - contig585end:10231-10250 MsG0080048987.01.T01:CDS 30.0%
TTGCTTGCATACCTATTTAA+TGG - contig585end:10115-10134 MsG0080048987.01.T01:exon 30.0%
! ATATTTGGAGATTTAGAGCA+TGG + contig585end:13244-13263 MsG0080048987.01.T01:intergenic 30.0%
! CACTGAAAAAGTATAGCAAT+TGG - contig585end:13688-13707 MsG0080048987.01.T01:intron 30.0%
! TAAGTCCAGTGGAATTATTT+TGG + contig585end:11190-11209 MsG0080048987.01.T01:intergenic 30.0%
! TTATGAGAGTGTAGATGTAT+TGG - contig585end:13635-13654 MsG0080048987.01.T01:CDS 30.0%
! TTTTTGAATGGTGAACTTGT+TGG - contig585end:13729-13748 MsG0080048987.01.T01:intron 30.0%
!! ATTTTAAGTGATACGACAGA+AGG - contig585end:11025-11044 MsG0080048987.01.T01:intron 30.0%
!! CAAGTTGGTAAAAGAGAATA+AGG - contig585end:13524-13543 MsG0080048987.01.T01:CDS 30.0%
!! TTAGGCATGAAGGTTTTAAT+TGG - contig585end:12240-12259 MsG0080048987.01.T01:intron 30.0%
!! TTCCCTCAGATATTTTTGAA+TGG - contig585end:13717-13736 MsG0080048987.01.T01:intron 30.0%
!! TTTTAAGTGATACGACAGAA+GGG - contig585end:11026-11045 MsG0080048987.01.T01:intron 30.0%
!!! CTTTGTCTTATGTTGGTTTT+TGG - contig585end:10238-10257 MsG0080048987.01.T01:CDS 30.0%
!!! CTTTTCAAAGGTATTTTGAG+TGG - contig585end:12134-12153 MsG0080048987.01.T01:intron 30.0%
!!! GTTATGGGTGTTTTATTTTG+AGG - contig585end:10368-10387 MsG0080048987.01.T01:CDS 30.0%
!!! TAGGCATGAAGGTTTTAATT+GGG - contig585end:12241-12260 MsG0080048987.01.T01:intron 30.0%
AACTTAAAACCTGTGAAGCT+CGG - contig585end:11083-11102 MsG0080048987.01.T01:intron 35.0%
AAGGTAGTTGCATTCATCAA+GGG - contig585end:13543-13562 MsG0080048987.01.T01:intron 35.0%
ACATCCTTAACTTCAGAGTT+TGG - contig585end:11943-11962 MsG0080048987.01.T01:intron 35.0%
ACTATAGTACCAAATGTGCA+GGG + contig585end:10176-10195 MsG0080048987.01.T01:intergenic 35.0%
AGGAACACATAAAGATCAGT+GGG - contig585end:13373-13392 MsG0080048987.01.T01:intron 35.0%
ATAGGCATTCTTGAAAAGGA+AGG - contig585end:13606-13625 MsG0080048987.01.T01:intron 35.0%
ATTCCAAATAGTCGTGACAT+TGG + contig585end:12201-12220 MsG0080048987.01.T01:intergenic 35.0%
ATTCTCAAGAGCAAGCTTAA+AGG - contig585end:12290-12309 MsG0080048987.01.T01:intron 35.0%
ATTTGGTACTATAGTCTGGT+GGG - contig585end:10181-10200 MsG0080048987.01.T01:CDS 35.0%
CAAAAGAATGTCCAAAATGC+AGG + contig585end:13836-13855 MsG0080048987.01.T01:intergenic 35.0%
GAAATTGAATGAAAGGGTAG+GGG + contig585end:11333-11352 MsG0080048987.01.T01:intergenic 35.0%
GACTGAAAAACAACCAAACA+AGG + contig585end:12508-12527 MsG0080048987.01.T01:intergenic 35.0%
GACTTCTTCAACACAATAAG+TGG - contig585end:12791-12810 MsG0080048987.01.T01:intron 35.0%
GAGAAAAAGAGGGAAAATGA+TGG + contig585end:11302-11321 MsG0080048987.01.T01:intergenic 35.0%
GATCTCGAATCAAAAGTGAT+CGG + contig585end:10207-10226 MsG0080048987.01.T01:intergenic 35.0%
GGAAATTGAATGAAAGGGTA+GGG + contig585end:11334-11353 MsG0080048987.01.T01:intergenic 35.0%
GGTAATAGGCATTCTTGAAA+AGG - contig585end:13602-13621 MsG0080048987.01.T01:intron 35.0%
TAAGGTAGTTGCATTCATCA+AGG - contig585end:13542-13561 MsG0080048987.01.T01:intron 35.0%
TAATATTGCTGCTACTGTCT+CGG - contig585end:11580-11599 MsG0080048987.01.T01:intron 35.0%
TACGCCGTTTATGACAAAAA+CGG - contig585end:11530-11549 MsG0080048987.01.T01:intron 35.0%
TATCCAAGAGTTACCATGTT+TGG - contig585end:12951-12970 MsG0080048987.01.T01:intron 35.0%
TATGGTGTACCATCTATATG+CGG - contig585end:10520-10539 MsG0080048987.01.T01:CDS 35.0%
TGATGTTAGCCATTGATGAA+TGG + contig585end:11248-11267 MsG0080048987.01.T01:intergenic 35.0%
TGGAAATTGAATGAAAGGGT+AGG + contig585end:11335-11354 MsG0080048987.01.T01:intergenic 35.0%
TGGACGAAACAAGATACAAA+TGG + contig585end:10548-10567 MsG0080048987.01.T01:intergenic 35.0%
TGTGTTGAAGAAGTCTCATA+TGG + contig585end:12786-12805 MsG0080048987.01.T01:intergenic 35.0%
TTAAACTCTGTGGCTTGATT+TGG - contig585end:12341-12360 MsG0080048987.01.T01:CDS 35.0%
TTGCATACCTATTTAATGGC+TGG - contig585end:10119-10138 MsG0080048987.01.T01:exon 35.0%
TTTAGCCCAAACCATTGTTT+GGG + contig585end:12989-13008 MsG0080048987.01.T01:intergenic 35.0%
TTTCAACACTCTATTTCGCT+GGG + contig585end:12839-12858 MsG0080048987.01.T01:intergenic 35.0%
TTTCCAATGTCACGACTATT+TGG - contig585end:12195-12214 MsG0080048987.01.T01:intron 35.0%
! AAGAATAATTGAAGAGCACG+TGG - contig585end:12095-12114 MsG0080048987.01.T01:intron 35.0%
! CTGTAACCCACAATTTCTTT+TGG - contig585end:12869-12888 MsG0080048987.01.T01:intron 35.0%
! GAGCACCTTTATCTTTTCAA+AGG - contig585end:12122-12141 MsG0080048987.01.T01:intron 35.0%
! TAGAATGTGTGGAGCATTAA+GGG - contig585end:13878-13897 MsG0080048987.01.T01:exon 35.0%
! TCACGACTATTTGGAATACT+AGG - contig585end:12204-12223 MsG0080048987.01.T01:intron 35.0%
! TGGACATTCTTTTGACATGA+GGG - contig585end:13842-13861 MsG0080048987.01.T01:exon 35.0%
! TTAATTCTTGCTGCCTTGTT+TGG - contig585end:12492-12511 MsG0080048987.01.T01:CDS 35.0%
! TTGAAATTTTCCCGTATTGG+TGG + contig585end:11141-11160 MsG0080048987.01.T01:intergenic 35.0%
! TTGGACATTCTTTTGACATG+AGG - contig585end:13841-13860 MsG0080048987.01.T01:exon 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - contig585end:10207-10226 MsG0080048987.01.T01:CDS 35.0%
!! ATGACCAAACTCTGAAGTTA+AGG + contig585end:11950-11969 MsG0080048987.01.T01:intergenic 35.0%
!! CTCACCGTTTTTGTCATAAA+CGG + contig585end:11537-11556 MsG0080048987.01.T01:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - contig585end:10206-10225 MsG0080048987.01.T01:CDS 35.0%
!! TGATTGATTTTTCTGTGGAG+TGG - contig585end:12736-12755 MsG0080048987.01.T01:intron 35.0%
!! TGCTGTGATTGATTTTTCTG+TGG - contig585end:12731-12750 MsG0080048987.01.T01:intron 35.0%
!! TTTTTCTCCAGGGTGTTTTT+AGG - contig585end:10493-10512 MsG0080048987.01.T01:CDS 35.0%
!!! GTTTTTTCAGAGTCTGCTTT+AGG - contig585end:10450-10469 MsG0080048987.01.T01:CDS 35.0%
!!! TGAAGGTTTTAATTGGGAGA+AGG - contig585end:12247-12266 MsG0080048987.01.T01:intron 35.0%
!!! TTATTTTGAGGGTGTCTTTG+TGG - contig585end:10380-10399 MsG0080048987.01.T01:CDS 35.0%
!!! TTCAAAGGTATTTTGAGTGG+AGG - contig585end:12137-12156 MsG0080048987.01.T01:intron 35.0%
!!! TTTAATGGCTGGTTTTTCTC+TGG - contig585end:10130-10149 MsG0080048987.01.T01:exon 35.0%
AACGGTGAGCTTCAGTTTAT+CGG - contig585end:11548-11567 MsG0080048987.01.T01:intron 40.0%
ACTTCAGAGTTTGGTCATGA+CGG - contig585end:11952-11971 MsG0080048987.01.T01:intron 40.0%
AGTTGCTCCCACAATGAAAT+TGG + contig585end:11997-12016 MsG0080048987.01.T01:intergenic 40.0%
ATAACCACCTAAAAACACCC+TGG + contig585end:10503-10522 MsG0080048987.01.T01:intergenic 40.0%
CACTTCACCTTTCTCATTCA+TGG + contig585end:13775-13794 MsG0080048987.01.T01:intergenic 40.0%
CATGAATGAGAAAGGTGAAG+TGG - contig585end:13773-13792 MsG0080048987.01.T01:intron 40.0%
CATTAAGGGAAGAGAAATGC+AGG - contig585end:13892-13911 MsG0080048987.01.T01:exon 40.0%
CATTTGGTACTATAGTCTGG+TGG - contig585end:10180-10199 MsG0080048987.01.T01:CDS 40.0%
CTCAACTGACCATTCATCAA+TGG - contig585end:11236-11255 MsG0080048987.01.T01:intron 40.0%
CTCTTGGATAGATTCAAGTG+TGG + contig585end:12941-12960 MsG0080048987.01.T01:intergenic 40.0%
CTTTAGCCCAAACCATTGTT+TGG + contig585end:12990-13009 MsG0080048987.01.T01:intergenic 40.0%
CTTTCAACACTCTATTTCGC+TGG + contig585end:12840-12859 MsG0080048987.01.T01:intergenic 40.0%
GAACCAAACATGGTAACTCT+TGG + contig585end:12957-12976 MsG0080048987.01.T01:intergenic 40.0%
GACTATAGTACCAAATGTGC+AGG + contig585end:10177-10196 MsG0080048987.01.T01:intergenic 40.0%
GAGGAACACATAAAGATCAG+TGG - contig585end:13372-13391 MsG0080048987.01.T01:intron 40.0%
GCACATTTGGTACTATAGTC+TGG - contig585end:10177-10196 MsG0080048987.01.T01:CDS 40.0%
GCATTAATGTAGCTTGAGGA+TGG - contig585end:11761-11780 MsG0080048987.01.T01:intron 40.0%
GCTTTGTGTTAGTGCTCTTT+CGG - contig585end:10261-10280 MsG0080048987.01.T01:CDS 40.0%
GGATTAATTCCTAAGCCCAA+TGG + contig585end:10894-10913 MsG0080048987.01.T01:intergenic 40.0%
GGGGTGGAAATTGAATGAAA+GGG + contig585end:11339-11358 MsG0080048987.01.T01:intergenic 40.0%
GGTATTTGGGGAGAAAAAGA+GGG + contig585end:11312-11331 MsG0080048987.01.T01:intergenic 40.0%
GTCGAATGTTTCTTGTGTAG+CGG - contig585end:12667-12686 MsG0080048987.01.T01:intron 40.0%
GTTAGGTGTTCTTTGATACG+TGG - contig585end:10328-10347 MsG0080048987.01.T01:CDS 40.0%
GTTATGTGGATTCTCTCAGA+GGG - contig585end:13581-13600 MsG0080048987.01.T01:intron 40.0%
TAAGCTAGGAGTAGAATGTG+TGG - contig585end:13867-13886 MsG0080048987.01.T01:exon 40.0%
TCAGCACAAAACTCTCAATC+AGG + contig585end:12708-12727 MsG0080048987.01.T01:intergenic 40.0%
TGGGGTGGAAATTGAATGAA+AGG + contig585end:11340-11359 MsG0080048987.01.T01:intergenic 40.0%
TGTGGATGATTAGTGACGAT+GGG - contig585end:10398-10417 MsG0080048987.01.T01:CDS 40.0%
TGTGGCATTAATGTAGCTTG+AGG - contig585end:11757-11776 MsG0080048987.01.T01:intron 40.0%
TTCACCTTTCTCATTCATGG+AGG + contig585end:13772-13791 MsG0080048987.01.T01:intergenic 40.0%
TTGACCTCCATGAATGAGAA+AGG - contig585end:13765-13784 MsG0080048987.01.T01:intron 40.0%
TTGGAATACTAGGAATGCCA+CGG - contig585end:12214-12233 MsG0080048987.01.T01:intron 40.0%
TTGTGGATGATTAGTGACGA+TGG - contig585end:10397-10416 MsG0080048987.01.T01:CDS 40.0%
TTTGGCCCAAACAATGGTTT+GGG - contig585end:12981-13000 MsG0080048987.01.T01:intron 40.0%
! ATTTTGTATCCGAGCTTCAC+AGG + contig585end:11095-11114 MsG0080048987.01.T01:intergenic 40.0%
! CAAACTTTTCACGAACCTTC+CGG + contig585end:12163-12182 MsG0080048987.01.T01:intergenic 40.0%
! CTCTGAGAGAATCCACATAA+CGG + contig585end:13582-13601 MsG0080048987.01.T01:intergenic 40.0%
! CTTTAGGTGGTGATGTGTTA+TGG - contig585end:10466-10485 MsG0080048987.01.T01:CDS 40.0%
! GTAGAATGTGTGGAGCATTA+AGG - contig585end:13877-13896 MsG0080048987.01.T01:exon 40.0%
! GTGCAATTCTGTTTTGCAGT+CGG - contig585end:12583-12602 MsG0080048987.01.T01:intron 40.0%
! TACTATATAGGTTGGGGTAG+TGG - contig585end:13302-13321 MsG0080048987.01.T01:intron 40.0%
! TAGCTTTTCGCTTAACCAGT+GGG - contig585end:12316-12335 MsG0080048987.01.T01:intron 40.0%
! TTGTTTGCTTGAGGGTGTAT+GGG - contig585end:12431-12450 MsG0080048987.01.T01:CDS 40.0%
!! AATGAAAGGGTAGGGGTATT+TGG + contig585end:11326-11345 MsG0080048987.01.T01:intergenic 40.0%
!! ACCATGTTTGGTTCTCTGTT+TGG - contig585end:12963-12982 MsG0080048987.01.T01:intron 40.0%
!! ATGAAAGGGTAGGGGTATTT+GGG + contig585end:11325-11344 MsG0080048987.01.T01:intergenic 40.0%
!! TGTGGAGTGGCTTTTTAGTA+TGG - contig585end:12749-12768 MsG0080048987.01.T01:intron 40.0%
!! TTAGCTTTTCGCTTAACCAG+TGG - contig585end:12315-12334 MsG0080048987.01.T01:intron 40.0%
!! TTGAATGGTGAACTTGTTGG+TGG - contig585end:13732-13751 MsG0080048987.01.T01:intron 40.0%
!! TTTTCAGAGTCTGCTTTAGG+TGG - contig585end:10453-10472 MsG0080048987.01.T01:CDS 40.0%
!!! AGAAGGCGGAAATTTTAGCT+TGG - contig585end:12264-12283 MsG0080048987.01.T01:intron 40.0%
!!! AGGGTGTTTTTAGGTGGTTA+TGG - contig585end:10502-10521 MsG0080048987.01.T01:CDS 40.0%
!!! AGGTTTTAATTGGGAGAAGG+CGG - contig585end:12250-12269 MsG0080048987.01.T01:intron 40.0%
!!! TTATGGTGGGTTTTTCTCCA+GGG - contig585end:10483-10502 MsG0080048987.01.T01:CDS 40.0%
AAGACCACAGCCTAAGAAGA+AGG - contig585end:13437-13456 MsG0080048987.01.T01:intron 45.0%
AAGCAATACCAGAACAGGCA+AGG + contig585end:12386-12405 MsG0080048987.01.T01:intergenic 45.0%
AATGAGAAAGGTGAAGTGGC+TGG - contig585end:13777-13796 MsG0080048987.01.T01:exon 45.0%
ACACAAGAAACATTCGACCC+CGG + contig585end:12665-12684 MsG0080048987.01.T01:intergenic 45.0%
ACGATACTGCACCACCAATA+CGG - contig585end:11127-11146 MsG0080048987.01.T01:intron 45.0%
AGCAATACCAGAACAGGCAA+GGG + contig585end:12385-12404 MsG0080048987.01.T01:intergenic 45.0%
CATCCAAGACTTCCATGCTT+GGG + contig585end:13352-13371 MsG0080048987.01.T01:intergenic 45.0%
CATCTTCATCTGTGCATTGG+AGG - contig585end:12553-12572 MsG0080048987.01.T01:intron 45.0%
CGAAGATCAGCCTTCTTCTT+AGG + contig585end:13450-13469 MsG0080048987.01.T01:intergenic 45.0%
CGTTATGTGGATTCTCTCAG+AGG - contig585end:13580-13599 MsG0080048987.01.T01:intron 45.0%
CTCAATCAGGTAAAGATCCC+TGG + contig585end:12695-12714 MsG0080048987.01.T01:intergenic 45.0%
CTGCAAGCAAAGCTGCAAAA+AGG + contig585end:12530-12549 MsG0080048987.01.T01:intergenic 45.0%
CTGCATCTTCATCTGTGCAT+TGG - contig585end:12550-12569 MsG0080048987.01.T01:intron 45.0%
GAGAAGCAACATAAGTCCAG+TGG + contig585end:11201-11220 MsG0080048987.01.T01:intergenic 45.0%
GAGAATCTTTGACCCAAGCA+TGG - contig585end:13337-13356 MsG0080048987.01.T01:intron 45.0%
GCCAAACAGAGAACCAAACA+TGG + contig585end:12967-12986 MsG0080048987.01.T01:intergenic 45.0%
GCTGATCTTCGATTAACACC+TGG - contig585end:13459-13478 MsG0080048987.01.T01:intron 45.0%
GGATTCTCTCAGAGGGTAAT+AGG - contig585end:13588-13607 MsG0080048987.01.T01:intron 45.0%
GGGTATTTGGGGAGAAAAAG+AGG + contig585end:11313-11332 MsG0080048987.01.T01:intergenic 45.0%
GGTAGGGTTTGAGGGAAATT+GGG + contig585end:11382-11401 MsG0080048987.01.T01:intergenic 45.0%
GTCATAAACGGCGTAAACTC+CGG + contig585end:11525-11544 MsG0080048987.01.T01:intergenic 45.0%
GTGATAGCTGCATGATCGTT+CGG - contig585end:10306-10325 MsG0080048987.01.T01:CDS 45.0%
GTGTGGACAAACATAGAGCA+TGG + contig585end:12924-12943 MsG0080048987.01.T01:intergenic 45.0%
GTGTTCTTTGATACGTGGCT+CGG - contig585end:10333-10352 MsG0080048987.01.T01:CDS 45.0%
GTTCCACCTGGAAATGAATC+CGG - contig585end:13399-13418 MsG0080048987.01.T01:intron 45.0%
GTTTGGCCCAAACAATGGTT+TGG - contig585end:12980-12999 MsG0080048987.01.T01:intron 45.0%
TCTCTGTTTGGCCCAAACAA+TGG - contig585end:12975-12994 MsG0080048987.01.T01:intron 45.0%
TGACCAAGCAATACCAGAAC+AGG + contig585end:12391-12410 MsG0080048987.01.T01:intergenic 45.0%
TGGGTCAAAGATTCTCTGTC+AGG + contig585end:13333-13352 MsG0080048987.01.T01:intergenic 45.0%
TGGTAGGGTTTGAGGGAAAT+TGG + contig585end:11383-11402 MsG0080048987.01.T01:intergenic 45.0%
TGTCCAAAATGCAGGTTCAC+CGG + contig585end:13828-13847 MsG0080048987.01.T01:intergenic 45.0%
TGTTCTGGTATTGCTTGGTC+AGG - contig585end:12390-12409 MsG0080048987.01.T01:CDS 45.0%
TTAGTGCTCTTTCGGTGGAT+CGG - contig585end:10269-10288 MsG0080048987.01.T01:CDS 45.0%
TTGACATGAGGGACTAAGCT+AGG - contig585end:13853-13872 MsG0080048987.01.T01:exon 45.0%
TTGCCTGTTCTGGTATTGCT+TGG - contig585end:12385-12404 MsG0080048987.01.T01:CDS 45.0%
TTGTGTTAGTGCTCTTTCGG+TGG - contig585end:10264-10283 MsG0080048987.01.T01:CDS 45.0%
TTTCCGGATTCATTTCCAGG+TGG + contig585end:13405-13424 MsG0080048987.01.T01:intergenic 45.0%
TTTCTTGTGTAGCGGTTCCA+GGG - contig585end:12675-12694 MsG0080048987.01.T01:intron 45.0%
! AGGTGGTGATGTGTTATGGT+GGG - contig585end:10470-10489 MsG0080048987.01.T01:CDS 45.0%
! CATTTTGAGCCATTGGGCTT+AGG - contig585end:10882-10901 MsG0080048987.01.T01:intron 45.0%
! CCACAGAGTTTAAAACCCAC+TGG + contig585end:12334-12353 MsG0080048987.01.T01:intergenic 45.0%
! CTTGTTTGCTTGAGGGTGTA+TGG - contig585end:12430-12449 MsG0080048987.01.T01:CDS 45.0%
! GTCGCAGCAGTTTCATTTTC+CGG - contig585end:12643-12662 MsG0080048987.01.T01:intron 45.0%
! TAATTGAAGAGCACGTGGAC+AGG - contig585end:12100-12119 MsG0080048987.01.T01:intron 45.0%
! TAGGTGGTGATGTGTTATGG+TGG - contig585end:10469-10488 MsG0080048987.01.T01:CDS 45.0%
! TCGCAGCAGTTTCATTTTCC+GGG - contig585end:12644-12663 MsG0080048987.01.T01:intron 45.0%
! TGGTTTTTCTCTGGTGTACC+GGG - contig585end:10139-10158 MsG0080048987.01.T01:exon 45.0%
!! AAGGTATTTTGAGTGGAGGC+CGG - contig585end:12141-12160 MsG0080048987.01.T01:intron 45.0%
!! CAAATGGTGCCGCATATAGA+TGG + contig585end:10532-10551 MsG0080048987.01.T01:intergenic 45.0%
!! CTGGTTTTTCTCTGGTGTAC+CGG - contig585end:10138-10157 MsG0080048987.01.T01:exon 45.0%
!! TGAAAGGGTAGGGGTATTTG+GGG + contig585end:11324-11343 MsG0080048987.01.T01:intergenic 45.0%
!!! AGGCGGAAATTTTAGCTTGG+AGG - contig585end:12267-12286 MsG0080048987.01.T01:intron 45.0%
!!! CCAGTGGGTTTTAAACTCTG+TGG - contig585end:12331-12350 MsG0080048987.01.T01:CDS 45.0%
!!! GTTATGGTGGGTTTTTCTCC+AGG - contig585end:10482-10501 MsG0080048987.01.T01:CDS 45.0%
!!! TTCTCCAGGGTGTTTTTAGG+TGG - contig585end:10496-10515 MsG0080048987.01.T01:CDS 45.0%
!!! AAAAAAAACAATATTTTTAA+CGG + contig585end:13186-13205 MsG0080048987.01.T01:intergenic 5.0%
AATTGGGCGTAGGTTTGTGG+AGG + contig585end:11366-11385 MsG0080048987.01.T01:intergenic 50.0%
ACACCCTCAAGCAAACAAGC+AGG + contig585end:12429-12448 MsG0080048987.01.T01:intergenic 50.0%
ACCTTCATGCCTAAAAGCCG+TGG + contig585end:12234-12253 MsG0080048987.01.T01:intergenic 50.0%
ACGGTTTCGTCGGAAAACGA+CGG - contig585end:11470-11489 MsG0080048987.01.T01:intron 50.0%
AGATAGTGCGAGGTTAGCAG+GGG - contig585end:12463-12482 MsG0080048987.01.T01:CDS 50.0%
AGCATGGAAGTCTTGGATGG+AGG - contig585end:13353-13372 MsG0080048987.01.T01:intron 50.0%
AGCTGCATGATCGTTCGGTT+AGG - contig585end:10311-10330 MsG0080048987.01.T01:CDS 50.0%
AGTTAAGCCCTTGCCTGTTC+TGG - contig585end:12375-12394 MsG0080048987.01.T01:CDS 50.0%
ATCAGTGGGAAAGTTCCACC+TGG - contig585end:13387-13406 MsG0080048987.01.T01:intron 50.0%
ATGAATCCGGAAACGCCACT+TGG - contig585end:13412-13431 MsG0080048987.01.T01:intron 50.0%
CACCCTCAAGCAAACAAGCA+GGG + contig585end:12428-12447 MsG0080048987.01.T01:intergenic 50.0%
CCAAGCATGGAAGTCTTGGA+TGG - contig585end:13350-13369 MsG0080048987.01.T01:intron 50.0%
CCATCCAAGACTTCCATGCT+TGG + contig585end:13353-13372 MsG0080048987.01.T01:intergenic 50.0%
CGATACTGCACCACCAATAC+GGG - contig585end:11128-11147 MsG0080048987.01.T01:intron 50.0%
CGTAGGTTTGTGGAGGAGTT+GGG + contig585end:11359-11378 MsG0080048987.01.T01:intergenic 50.0%
CTATGAGACGCACTAGAGTC+AGG + contig585end:10678-10697 MsG0080048987.01.T01:intergenic 50.0%
GAGATAGTGCGAGGTTAGCA+GGG - contig585end:12462-12481 MsG0080048987.01.T01:CDS 50.0%
GCGTTTCCGGATTCATTTCC+AGG + contig585end:13408-13427 MsG0080048987.01.T01:intergenic 50.0%
GGAAATTGGGCGTAGGTTTG+TGG + contig585end:11369-11388 MsG0080048987.01.T01:intergenic 50.0%
GGATGATTAGTGACGATGGG+CGG - contig585end:10401-10420 MsG0080048987.01.T01:CDS 50.0%
GTAGGTTTGTGGAGGAGTTG+GGG + contig585end:11358-11377 MsG0080048987.01.T01:intergenic 50.0%
GTCCCTGCTTGTTTGCTTGA+GGG - contig585end:12423-12442 MsG0080048987.01.T01:CDS 50.0%
GTTAGTTGCATGTGACGACC+AGG + contig585end:13480-13499 MsG0080048987.01.T01:intergenic 50.0%
GTTTCTTGTGTAGCGGTTCC+AGG - contig585end:12674-12693 MsG0080048987.01.T01:intron 50.0%
GTTTGAGGGAAATTGGGCGT+AGG + contig585end:11376-11395 MsG0080048987.01.T01:intergenic 50.0%
TAGAGTCAGGACAGGGATCA+AGG + contig585end:10665-10684 MsG0080048987.01.T01:intergenic 50.0%
TCAGCCTTCTTCTTAGGCTG+TGG + contig585end:13444-13463 MsG0080048987.01.T01:intergenic 50.0%
TCTTACCCAAGTGGCGTTTC+CGG + contig585end:13421-13440 MsG0080048987.01.T01:intergenic 50.0%
TGAAGAGCTCGTGGACAAGT+TGG - contig585end:13509-13528 MsG0080048987.01.T01:CDS 50.0%
TGAATCCGGAAACGCCACTT+GGG - contig585end:13413-13432 MsG0080048987.01.T01:intron 50.0%
TGACCCAAGCATGGAAGTCT+TGG - contig585end:13346-13365 MsG0080048987.01.T01:intron 50.0%
TGTCCACGAGCTCTTCAAGA+GGG + contig585end:13506-13525 MsG0080048987.01.T01:intergenic 50.0%
TGTCCCTGCTTGTTTGCTTG+AGG - contig585end:12422-12441 MsG0080048987.01.T01:CDS 50.0%
TTAACGGAGCCACAAAGCTC+CGG + contig585end:11623-11642 MsG0080048987.01.T01:intergenic 50.0%
TTGTCCACGAGCTCTTCAAG+AGG + contig585end:13507-13526 MsG0080048987.01.T01:intergenic 50.0%
! CGCAGCAGTTTCATTTTCCG+GGG - contig585end:12645-12664 MsG0080048987.01.T01:intron 50.0%
! CTAGGAATGCCACGGCTTTT+AGG - contig585end:12222-12241 MsG0080048987.01.T01:intron 50.0%
! GGTTTTTCTCTGGTGTACCG+GGG - contig585end:10140-10159 MsG0080048987.01.T01:exon 50.0%
! GTTTTTCTCTGGTGTACCGG+GGG - contig585end:10141-10160 MsG0080048987.01.T01:exon 50.0%
! TTTGATACGTGGCTCGGCTT+GGG - contig585end:10339-10358 MsG0080048987.01.T01:CDS 50.0%
! TTTTCCGACGAAACCGTCAC+CGG + contig585end:11467-11486 MsG0080048987.01.T01:intergenic 50.0%
!! GGCTTGATTTGGAGCAAGCA+GGG - contig585end:12352-12371 MsG0080048987.01.T01:CDS 50.0%
!! TATTTTGAGTGGAGGCCGGA+AGG - contig585end:12145-12164 MsG0080048987.01.T01:intron 50.0%
!! TGGCTTGATTTGGAGCAAGC+AGG - contig585end:12351-12370 MsG0080048987.01.T01:CDS 50.0%
ACCCGACGGAAGTTCTTCTC+CGG + contig585end:11501-11520 MsG0080048987.01.T01:intergenic 55.0%
ACCGGAGAAGAACTTCCGTC+GGG - contig585end:11497-11516 MsG0080048987.01.T01:intron 55.0%
AGACGCACTAGAGTCAGGAC+AGG + contig585end:10673-10692 MsG0080048987.01.T01:intergenic 55.0%
AGCCATGACTGAGGCTTTCG+GGG + contig585end:11407-11426 MsG0080048987.01.T01:intergenic 55.0%
ATCCCCGAAAGCCTCAGTCA+TGG - contig585end:11402-11421 MsG0080048987.01.T01:intron 55.0%
ATGACTGAGGCTTTCGGGGA+TGG + contig585end:11403-11422 MsG0080048987.01.T01:intergenic 55.0%
CACCGGAGAAGAACTTCCGT+CGG - contig585end:11496-11515 MsG0080048987.01.T01:intron 55.0%
CACGAGCTCTTCAAGAGGGA+CGG + contig585end:13502-13521 MsG0080048987.01.T01:intergenic 55.0%
CAGCCATGACTGAGGCTTTC+GGG + contig585end:11408-11427 MsG0080048987.01.T01:intergenic 55.0%
CCAGCCATGACTGAGGCTTT+CGG + contig585end:11409-11428 MsG0080048987.01.T01:intergenic 55.0%
CGAGATAGTGCGAGGTTAGC+AGG - contig585end:12461-12480 MsG0080048987.01.T01:CDS 55.0%
GACGCACTAGAGTCAGGACA+GGG + contig585end:10672-10691 MsG0080048987.01.T01:intergenic 55.0%
GCGTAGGTTTGTGGAGGAGT+TGG + contig585end:11360-11379 MsG0080048987.01.T01:intergenic 55.0%
GGTATTGCTTGGTCAGGTGC+TGG - contig585end:12396-12415 MsG0080048987.01.T01:CDS 55.0%
TACCTTGCGTCTTGCGAGGA+TGG - contig585end:10568-10587 MsG0080048987.01.T01:CDS 55.0%
TCCACATAACGGCGCACTTC+TGG + contig585end:13571-13590 MsG0080048987.01.T01:intergenic 55.0%
TCCATACCTTGCGTCTTGCG+AGG - contig585end:10564-10583 MsG0080048987.01.T01:CDS 55.0%
TCCTCGCAAGACGCAAGGTA+TGG + contig585end:10568-10587 MsG0080048987.01.T01:intergenic 55.0%
TCGGGGATGGTAGGGTTTGA+GGG + contig585end:11390-11409 MsG0080048987.01.T01:intergenic 55.0%
TGAGGCTTTCGGGGATGGTA+GGG + contig585end:11398-11417 MsG0080048987.01.T01:intergenic 55.0%
TGATTAGTGACGATGGGCGG+TGG - contig585end:10404-10423 MsG0080048987.01.T01:CDS 55.0%
TGTCTCGGCTCACCGGAAAT+CGG - contig585end:11595-11614 MsG0080048987.01.T01:intron 55.0%
TTCGGGGATGGTAGGGTTTG+AGG + contig585end:11391-11410 MsG0080048987.01.T01:intergenic 55.0%
! AGGCTGTGGTCTTACCCAAG+TGG + contig585end:13430-13449 MsG0080048987.01.T01:intergenic 55.0%
! CTGTTTTGCAGTCGGTGTGC+TGG - contig585end:12591-12610 MsG0080048987.01.T01:intron 55.0%
! CTTGAGGGTGTATGGGTCGA+AGG - contig585end:12438-12457 MsG0080048987.01.T01:CDS 55.0%
! CTTTGATACGTGGCTCGGCT+TGG - contig585end:10338-10357 MsG0080048987.01.T01:CDS 55.0%
! GCCACGGCTTTTAGGCATGA+AGG - contig585end:12230-12249 MsG0080048987.01.T01:intron 55.0%
! GGAGCTTTGTGGCTCCGTTA+AGG - contig585end:11622-11641 MsG0080048987.01.T01:intron 55.0%
! GGCGAGGTTTTTCACTGCCA+TGG + contig585end:11435-11454 MsG0080048987.01.T01:intergenic 55.0%
! TCCAGAAGTGCGCCGTTATG+TGG - contig585end:13567-13586 MsG0080048987.01.T01:intron 55.0%
! TCGGAAAACGACGGACTCAC+CGG - contig585end:11479-11498 MsG0080048987.01.T01:intron 55.0%
!! AAAGCTCCGGCACCGATTTC+CGG + contig585end:11610-11629 MsG0080048987.01.T01:intergenic 55.0%
!! AAATCGGTGCCGGAGCTTTG+TGG - contig585end:11611-11630 MsG0080048987.01.T01:intron 55.0%
!! GTGCCGGTGAACCTGCATTT+TGG - contig585end:13822-13841 MsG0080048987.01.T01:exon 55.0%
AAACCTCGCCGATACCTCGC+CGG - contig585end:11445-11464 MsG0080048987.01.T01:intron 60.0%
AACCGTCACCGGCGAGGTAT+CGG + contig585end:11456-11475 MsG0080048987.01.T01:intergenic 60.0%
ATGGCGACCAGCCATGACTG+AGG + contig585end:11416-11435 MsG0080048987.01.T01:intergenic 60.0%
CCGAAAGCCTCAGTCATGGC+TGG - contig585end:11406-11425 MsG0080048987.01.T01:intron 60.0%
CGTCCCTCTTGAAGAGCTCG+TGG - contig585end:13500-13519 MsG0080048987.01.T01:intron 60.0%
CTGAGGCTTTCGGGGATGGT+AGG + contig585end:11399-11418 MsG0080048987.01.T01:intergenic 60.0%
CTGCTACTGTCTCGGCTCAC+CGG - contig585end:11588-11607 MsG0080048987.01.T01:intron 60.0%
GAAGAACTTCCGTCGGGTGC+CGG - contig585end:11503-11522 MsG0080048987.01.T01:intron 60.0%
GGTTTGTGGAGGAGTTGGGG+TGG + contig585end:11355-11374 MsG0080048987.01.T01:intergenic 60.0%
GTCGAAGGCGAGATAGTGCG+AGG - contig585end:12453-12472 MsG0080048987.01.T01:CDS 60.0%
GTGCTCTTTCGGTGGATCGG+AGG - contig585end:10272-10291 MsG0080048987.01.T01:CDS 60.0%
TTAGTGACGATGGGCGGTGG+TGG - contig585end:10407-10426 MsG0080048987.01.T01:CDS 60.0%
! TCAGTCATGGCTGGTCGCCA+TGG - contig585end:11415-11434 MsG0080048987.01.T01:intron 60.0%
!! CGGCTTGGGCGTTGGGTTAT+GGG - contig585end:10353-10372 MsG0080048987.01.T01:CDS 60.0%
!! TCGGCTTGGGCGTTGGGTTA+TGG - contig585end:10352-10371 MsG0080048987.01.T01:CDS 60.0%
CGCCATCCTCGCAAGACGCA+AGG + contig585end:10573-10592 MsG0080048987.01.T01:intergenic 65.0%
GCGTAAACTCCGGCACCCGA+CGG + contig585end:11515-11534 MsG0080048987.01.T01:intergenic 65.0%
GGCTCACCGGAAATCGGTGC+CGG - contig585end:11601-11620 MsG0080048987.01.T01:intron 65.0%
GTGCGAGGTTAGCAGGGGCT+TGG - contig585end:12468-12487 MsG0080048987.01.T01:CDS 65.0%
TCGGTGGATCGGAGGTCGTG+AGG - contig585end:10280-10299 MsG0080048987.01.T01:CDS 65.0%
! CTCGCCGGTGACGGTTTCGT+CGG - contig585end:11460-11479 MsG0080048987.01.T01:intron 65.0%
!! CGAGGGGTGCCCTGCACATT+TGG - contig585end:10164-10183 MsG0080048987.01.T01:CDS 65.0%
CGACGAAACCGTCACCGGCG+AGG + contig585end:11462-11481 MsG0080048987.01.T01:intergenic 70.0%
CGCCGATACCTCGCCGGTGA+CGG - contig585end:11451-11470 MsG0080048987.01.T01:intron 70.0%
CTCTGGTGTACCGGGGGCGA+GGG - contig585end:10147-10166 MsG0080048987.01.T01:CDS 70.0%
TCTCTGGTGTACCGGGGGCG+AGG - contig585end:10146-10165 MsG0080048987.01.T01:exon 70.0%
TCTGGTGTACCGGGGGCGAG+GGG - contig585end:10148-10167 MsG0080048987.01.T01:CDS 70.0%
!! ACGTGGCTCGGCTTGGGCGT+TGG - contig585end:10345-10364 MsG0080048987.01.T01:CDS 70.0%
!! CGTGGCTCGGCTTGGGCGTT+GGG - contig585end:10346-10365 MsG0080048987.01.T01:CDS 70.0%
!! TCACCGGCGAGGTATCGGCG+AGG + contig585end:11451-11470 MsG0080048987.01.T01:intergenic 70.0%
!! TGCAGGGCACCCCTCGCCCC+CGG + contig585end:10160-10179 MsG0080048987.01.T01:intergenic 80.0%
Chromosome Type Strat End Strand Name
contig585end gene 10001 13961 10001 ID=MsG0080048987.01;
contig585end mRNA 10001 13961 10001 ID=MsG0080048987.01.T01;Parent=MsG0080048987.01
contig585end exon 10001 10650 10001 ID=MsG0080048987.01.T01.exon;Parent=MsG0080048987.01.T01
contig585end CDS 10147 10650 10147 ID=MsG0080048987.01.T01.cds;Parent=MsG0080048987.01.T01
contig585end CDS 12319 12543 12319 ID=MsG0080048987.01.T01.cds;Parent=MsG0080048987.01.T01
contig585end exon 12319 12543 12319 ID=MsG0080048987.01.T01.exon;Parent=MsG0080048987.01.T01
contig585end CDS 13502 13551 13502 ID=MsG0080048987.01.T01.cds;Parent=MsG0080048987.01.T01
contig585end exon 13502 13551 13502 ID=MsG0080048987.01.T01.exon;Parent=MsG0080048987.01.T01
contig585end CDS 13630 13689 13630 ID=MsG0080048987.01.T01.cds;Parent=MsG0080048987.01.T01
contig585end exon 13630 13689 13630 ID=MsG0080048987.01.T01.exon;Parent=MsG0080048987.01.T01
contig585end CDS 13777 13828 13777 ID=MsG0080048987.01.T01.cds;Parent=MsG0080048987.01.T01
contig585end exon 13777 13961 13777 ID=MsG0080048987.01.T01.exon;Parent=MsG0080048987.01.T01
Gene Sequence

>MsG0080048987.01.T01

ATGGCTGGTTTTTCTCTGGTGTACCGGGGGCGAGGGGTGCCCTGCACATTTGTGCTCTTTCGGTGGATCGGAGGTCGTGAGGTTTGTGATAGCTGCATGATCGTTCGGTTAGTGACGATGGGCGGTGGTGGATACCGTGTTTACAATGCTTGTTTTTTCAGATCATGGCTGGTCGCCATGGCAGTGAAAAACCTCGCCGATACCTCGCCGGTGACGGTTTCGTCGGAAAACGACGGACTCACCGGAGAAGAACTTCCGTCGGGTGCCGGAGTTTACGCCGTTTATGACAAAAACGGTGAGCTTCAGTTTATCGGTTTGTCGCGTAATATTGCTGCTACTGTCTCGGCTCACCGGAAATCGGTGCCGGAGCTTTGTGGCTCCGTTAAGGTTGGGGTAGTGGATGAACCTGACAGAGAATCTTTGACCCAAGCATGGAAGTCTTGGATGGAGGAACACATAAAGATCAGTGGGAAAGTTCCACCTGGAAATGAATCCGGAAACGCCACTTGGGTAAGACCACAGCCTAAGAAGAAGGCTGATCTTCGATTAACACCTGGTCGTCACATGCAACTAACCGTCCCTCTTGAAGAGCTCGTGGACAAGTTGGTAAAAGAGAATAAGGTAGTTGCATTCATCAAGGGATCCAGAAGTGCGCCGTTATGTGGATTCTCTCAGAGGGTAATAGGCATTCTTGAAAAGGAAGGAGTAGATTATGAGAGTGTAGATGTATTGGATGAAGATTATAACTATGGATTGAGGGAGACACTGAAAAAGTATAGCAATTGGCCTACATTCCCTCAGATATTTTTGAATGGTGAACTTGTTGGTGGTTGTGATATATTGACCTCCATGAATGAGAAAGGTGAAGTGGCTGGTTTGTTCAAAAAGTAA

Protein sequence

>MsG0080048987.01.T01

MAGFSLVYRGRGVPCTFVLFRWIGGREVCDSCMIVRLVTMGGGGYRVYNACFFRSWLVAMAVKNLADTSPVTVSSENDGLTGEELPSGAGVYAVYDKNGELQFIGLSRNIAATVSAHRKSVPELCGSVKVGVVDEPDRESLTQAWKSWMEEHIKISGKVPPGNESGNATWVRPQPKKKADLRLTPGRHMQLTVPLEELVDKLVKENKVVAFIKGSRSAPLCGFSQRVIGILEKEGVDYESVDVLDEDYNYGLRETLKKYSNWPTFPQIFLNGELVGGCDILTSMNEKGEVAGLFKK*