AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0195190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195190 MtrunA17_Chr2g0292091 96.221 344 13 0 1 344 1 344 0.0 677
Msa0195190 MtrunA17_Chr2g0292101 83.768 345 55 1 1 344 1 345 0.0 589
Msa0195190 MtrunA17_Chr2g0292111 68.437 339 102 1 1 334 1 339 2.30e-169 475
Msa0195190 MtrunA17_Chr2g0292241 66.964 336 106 1 1 331 1 336 9.14e-167 469
Msa0195190 MtrunA17_Chr2g0292181 66.964 336 106 1 1 331 10 345 1.30e-165 466
Msa0195190 MtrunA17_Chr2g0292211 68.155 336 102 1 1 331 12 347 7.93e-165 464
Msa0195190 MtrunA17_Chr2g0292251 71.613 310 88 0 22 331 26 335 6.81e-163 459
Msa0195190 MtrunA17_Chr2g0292151 63.953 344 119 1 1 339 1 344 7.10e-161 454
Msa0195190 MtrunA17_Chr2g0291751 66.159 328 111 0 9 336 14 341 2.46e-159 450
Msa0195190 MtrunA17_Chr2g0292271 64.023 353 115 3 4 344 1 353 1.15e-155 440
Msa0195190 MtrunA17_Chr2g0292261 62.784 352 123 2 1 344 1 352 9.40e-154 436
Msa0195190 MtrunA17_Chr2g0292291 63.265 343 118 3 10 344 11 353 8.96e-153 433
Msa0195190 MtrunA17_Chr7g0258811 57.595 316 133 1 12 326 57 372 3.92e-125 363
Msa0195190 MtrunA17_Chr1g0175561 53.823 327 150 1 1 326 1 327 3.28e-123 357
Msa0195190 MtrunA17_Chr4g0070951 52.769 307 141 2 22 326 26 330 3.24e-108 319
Msa0195190 MtrunA17_Chr5g0404721 50.993 302 147 1 24 325 30 330 1.94e-107 317
Msa0195190 MtrunA17_Chr8g0372601 49.669 302 151 1 24 325 30 330 1.23e-104 310
Msa0195190 MtrunA17_Chr5g0402571 51.148 305 145 3 22 325 25 326 3.63e-103 306
Msa0195190 MtrunA17_Chr5g0402581 49.843 319 155 4 9 325 11 326 4.39e-102 303
Msa0195190 MtrunA17_Chr2g0299691 48.860 307 152 2 23 326 55 359 2.32e-99 297
Msa0195190 MtrunA17_Chr3g0129051 50.662 302 138 4 22 321 26 318 1.21e-97 292
Msa0195190 MtrunA17_Chr1g0155611 48.013 302 157 0 24 325 46 347 1.44e-97 293
Msa0195190 MtrunA17_Chr4g0013201 47.869 305 150 2 21 325 43 338 2.41e-97 291
Msa0195190 MtrunA17_Chr5g0432441 45.872 327 164 5 3 325 9 326 5.54e-97 290
Msa0195190 MtrunA17_Chr5g0432351 47.302 315 155 5 14 325 15 321 2.28e-96 288
Msa0195190 MtrunA17_Chr5g0432341 47.302 315 155 5 14 325 15 321 4.14e-96 288
Msa0195190 MtrunA17_Chr2g0320071 45.652 322 166 2 4 325 5 317 9.90e-96 287
Msa0195190 MtrunA17_Chr4g0013191 48.208 307 147 4 22 325 43 340 1.46e-95 287
Msa0195190 MtrunA17_Chr4g0068621 46.689 302 158 2 24 325 38 336 1.53e-95 287
Msa0195190 MtrunA17_Chr2g0320101 48.852 305 145 3 22 325 23 317 2.34e-95 286
Msa0195190 MtrunA17_Chr4g0013171 46.708 319 157 5 10 325 13 321 5.88e-94 282
Msa0195190 MtrunA17_Chr3g0106921 46.372 317 158 5 12 325 13 320 6.56e-94 282
Msa0195190 MtrunA17_Chr3g0114451 46.535 303 153 2 23 325 25 318 6.64e-94 282
Msa0195190 MtrunA17_Chr5g0438021 46.440 323 160 5 7 325 12 325 6.84e-94 282
Msa0195190 MtrunA17_Chr2g0320091 47.213 305 151 3 22 325 23 318 1.21e-93 281
Msa0195190 MtrunA17_Chr5g0432331 46.984 315 156 5 14 325 46 352 2.08e-93 282
Msa0195190 MtrunA17_Chr7g0244461 46.711 304 153 2 22 325 18 312 2.30e-93 280
Msa0195190 MtrunA17_Chr5g0400331 46.452 310 162 2 20 325 22 331 4.41e-93 280
Msa0195190 MtrunA17_Chr4g0043391 49.511 307 145 4 22 325 25 324 6.84e-93 280
Msa0195190 MtrunA17_Chr3g0129061 47.095 327 158 5 1 321 1 318 9.18e-92 277
Msa0195190 MtrunA17_Chr4g0038171 48.534 307 148 3 22 325 22 321 1.02e-91 276
Msa0195190 MtrunA17_Chr7g0244451 46.711 304 153 2 22 325 22 316 3.95e-91 275
Msa0195190 MtrunA17_Chr2g0320051 44.479 326 172 3 1 325 1 318 1.06e-90 274
Msa0195190 MtrunA17_Chr2g0320061 44.479 326 172 3 1 325 1 318 1.39e-90 274
Msa0195190 MtrunA17_Chr4g0013181 48.333 300 144 4 28 325 63 353 2.31e-90 274
Msa0195190 MtrunA17_Chr2g0292281 60.870 230 78 3 117 344 18 237 3.19e-90 270
Msa0195190 MtrunA17_Chr4g0038161 45.732 328 167 3 1 325 1 320 5.11e-90 272
Msa0195190 MtrunA17_Chr4g0038151 46.906 307 152 3 22 325 23 321 1.63e-89 271
Msa0195190 MtrunA17_Chr3g0129041 47.468 316 155 4 12 325 16 322 2.80e-89 270
Msa0195190 MtrunA17_Chr5g0421411 46.996 283 141 4 49 325 6 285 2.92e-88 266
Msa0195190 MtrunA17_Chr1g0213061 43.038 316 168 5 13 326 17 322 3.35e-86 263
Msa0195190 MtrunA17_Chr2g0320031 44.918 305 158 4 22 325 24 319 3.47e-86 263
Msa0195190 MtrunA17_Chr7g0224371 43.692 325 164 6 6 326 14 323 1.09e-85 261
Msa0195190 MtrunA17_Chr3g0106901 43.810 315 167 3 11 325 19 323 7.67e-85 259
Msa0195190 MtrunA17_Chr3g0107881 44.625 307 160 3 22 325 25 324 2.15e-84 258
Msa0195190 MtrunA17_Chr4g0024121 41.896 327 185 5 1 325 3 326 2.13e-83 256
Msa0195190 MtrunA17_Chr4g0076211 43.960 298 156 6 29 325 46 333 5.38e-83 255
Msa0195190 MtrunA17_Chr4g0013721 42.763 304 169 3 22 325 98 396 1.06e-81 254
Msa0195190 MtrunA17_Chr2g0279041 45.033 302 155 5 28 325 31 325 1.41e-81 251
Msa0195190 MtrunA17_Chr2g0322861 41.796 323 181 6 5 325 69 386 9.54e-81 251
Msa0195190 MtrunA17_Chr4g0013821 42.763 304 167 4 24 326 28 325 1.16e-80 249
Msa0195190 MtrunA17_Chr4g0063671 43.042 309 164 6 22 325 19 320 1.19e-79 246
Msa0195190 MtrunA17_Chr1g0204011 39.077 325 192 4 1 325 4 322 2.02e-79 245
Msa0195190 MtrunA17_Chr5g0405991 42.574 303 164 7 24 325 23 316 3.62e-79 244
Msa0195190 MtrunA17_Chr6g0467161 41.846 325 169 7 10 325 23 336 1.30e-78 244
Msa0195190 MtrunA17_Chr2g0296621 43.092 304 161 6 24 326 50 342 1.43e-78 244
Msa0195190 MtrunA17_Chr1g0194151 40.606 330 185 4 5 325 6 333 7.72e-78 241
Msa0195190 MtrunA17_Chr3g0128061 40.065 307 181 2 21 326 23 327 3.06e-77 240
Msa0195190 MtrunA17_Chr1g0188431 41.722 302 163 5 24 325 39 327 5.02e-77 239
Msa0195190 MtrunA17_Chr1g0194271 40.774 336 181 5 6 325 7 340 2.82e-76 238
Msa0195190 MtrunA17_Chr1g0164891 42.244 303 167 5 28 325 93 392 4.81e-76 239
Msa0195190 MtrunA17_Chr7g0268501 41.250 320 181 5 6 325 8 320 1.24e-75 235
Msa0195190 MtrunA17_Chr7g0268521 41.250 320 181 5 6 325 8 320 1.24e-75 235
Msa0195190 MtrunA17_Chr1g0157051 41.254 303 169 6 24 325 24 318 2.59e-75 234
Msa0195190 MtrunA17_Chr8g0371381 41.584 303 167 7 24 325 26 319 3.01e-75 234
Msa0195190 MtrunA17_Chr6g0467121 41.441 333 170 8 10 331 51 369 7.18e-74 233
Msa0195190 MtrunA17_Chr5g0432401 41.830 306 128 5 22 324 27 285 3.07e-73 228
Msa0195190 MtrunA17_Chr6g0477071 39.062 320 181 6 6 325 37 342 3.14e-73 230
Msa0195190 MtrunA17_Chr7g0254201 39.869 306 175 5 20 325 16 312 6.32e-73 228
Msa0195190 MtrunA17_Chr6g0460711 40.994 322 182 5 4 325 1 314 7.23e-71 223
Msa0195190 MtrunA17_Chr5g0401431 39.039 333 189 8 1 324 1 328 2.14e-70 222
Msa0195190 MtrunA17_Chr7g0225221 40.122 329 181 7 4 325 1 320 3.26e-70 221
Msa0195190 MtrunA17_Chr4g0075241 39.016 305 179 4 23 325 28 327 3.21e-69 219
Msa0195190 MtrunA17_Chr1g0197411 38.436 307 184 4 22 325 26 330 8.10e-69 218
Msa0195190 MtrunA17_Chr1g0148021 39.458 332 190 7 1 325 1 328 1.23e-68 218
Msa0195190 MtrunA17_Chr6g0467251 42.000 300 161 6 24 321 36 324 2.14e-68 218
Msa0195190 MtrunA17_Chr2g0279061 45.802 262 131 5 68 325 12 266 3.60e-67 212
Msa0195190 MtrunA17_Chr2g0278671 41.479 311 166 9 22 325 22 323 7.33e-67 213
Msa0195190 MtrunA17_Chr4g0046131 38.361 305 181 5 23 322 41 343 1.24e-66 213
Msa0195190 MtrunA17_Chr4g0072091 39.073 302 176 4 23 321 23 319 2.87e-64 206
Msa0195190 MtrunA17_Chr4g0053871 37.576 330 193 5 1 324 1 323 2.94e-64 206
Msa0195190 MtrunA17_Chr7g0254231 37.377 305 179 5 22 326 20 312 5.22e-63 203
Msa0195190 MtrunA17_Chr8g0364291 34.906 318 203 3 10 325 9 324 1.37e-62 202
Msa0195190 MtrunA17_Chr3g0136751 39.934 303 172 4 22 321 23 318 1.53e-62 202
Msa0195190 MtrunA17_Chr2g0329641 37.338 308 181 5 23 325 35 335 1.22e-60 197
Msa0195190 MtrunA17_Chr5g0413051 36.774 310 187 6 22 325 71 377 2.18e-60 198
Msa0195190 MtrunA17_Chr6g0451571 37.013 308 185 7 22 325 32 334 1.54e-58 192
Msa0195190 MtrunA17_Chr2g0316791 34.535 333 183 7 22 322 74 403 4.27e-56 187
Msa0195190 MtrunA17_Chr2g0316481 35.135 333 181 7 22 322 74 403 7.57e-56 187
Msa0195190 MtrunA17_Chr1g0181511 33.762 311 195 4 20 327 23 325 8.26e-55 182
Msa0195190 MtrunA17_Chr2g0316831 34.835 333 182 7 22 322 110 439 1.64e-54 184
Msa0195190 MtrunA17_Chr1g0181431 34.084 311 194 4 20 327 23 325 2.38e-54 181
Msa0195190 MtrunA17_Chr2g0316191 34.132 334 184 7 22 322 74 404 1.60e-53 181
Msa0195190 MtrunA17_Chr1g0181481 34.405 311 193 4 20 327 23 325 2.43e-53 178
Msa0195190 MtrunA17_Chr2g0311251 34.030 335 185 8 22 324 9 339 7.10e-53 177
Msa0195190 MtrunA17_Chr2g0311241 30.319 376 185 7 22 324 58 429 4.20e-49 170
Msa0195190 MtrunA17_Chr3g0114461 43.979 191 99 2 135 325 10 192 5.01e-49 163
Msa0195190 MtrunA17_Chr4g0074851 32.558 301 192 4 28 325 36 328 1.67e-44 155
Msa0195190 MtrunA17_Chr4g0004591 29.595 321 164 3 24 324 77 355 1.76e-42 150
Msa0195190 MtrunA17_Chr2g0316811 35.537 242 138 4 22 246 48 288 1.31e-38 140
Msa0195190 MtrunA17_Chr3g0114491 50.459 109 54 0 20 128 14 122 2.45e-32 117
Msa0195190 MtrunA17_Chr2g0316141 31.119 286 143 9 70 322 11 275 1.24e-31 120
Msa0195190 MtrunA17_Chr2g0316181 31.119 286 143 9 70 322 11 275 1.24e-31 120
Msa0195190 MtrunA17_Chr5g0432321 45.161 124 60 2 145 268 17 132 2.62e-26 101
Msa0195190 MtrunA17_Chr1g0181501 31.633 196 123 4 135 327 4 191 1.74e-24 98.6
Msa0195190 MtrunA17_Chr3g0104101 35.862 145 84 4 188 326 9 150 1.59e-20 86.7
Msa0195190 MtrunA17_Chr6g0468731 53.521 71 29 2 63 133 22 88 4.48e-18 78.2
Msa0195190 MtrunA17_Chr7g0254181 38.095 105 61 2 86 190 22 122 4.69e-18 80.1
Msa0195190 MtrunA17_Chr2g0316771 28.729 181 97 3 174 324 7 185 8.08e-18 80.5
Msa0195190 MtrunA17_Chr1g0181491 40.187 107 62 2 22 128 10 114 2.42e-17 78.2
Msa0195190 MtrunA17_Chr5g0432361 40.860 93 54 1 232 324 17 108 1.94e-16 74.3
Msa0195190 MtrunA17_Chr1g0196191 57.143 63 26 1 66 128 27 88 1.60e-15 73.2
Msa0195190 MtrunA17_Chr4g0013811 42.466 73 42 0 135 207 6 78 1.49e-13 65.5
Msa0195190 MtrunA17_Chr7g0254171 36.842 76 47 1 67 142 1 75 5.77e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0195190 AT5G06730.1 56.024 332 146 0 6 337 15 346 3.70e-133 384
Msa0195190 AT5G06720.1 57.321 321 137 0 6 326 14 334 1.60e-132 381
Msa0195190 AT2G38380.1 55.828 326 141 2 3 325 8 333 6.25e-130 375
Msa0195190 AT4G08770.1 55.591 313 137 2 21 331 21 333 4.34e-127 368
Msa0195190 AT3G32980.1 57.321 321 133 3 12 328 17 337 1.33e-125 364
Msa0195190 AT3G49120.1 56.386 321 136 3 12 328 18 338 1.71e-125 364
Msa0195190 AT2G38390.1 54.601 326 145 2 3 325 8 333 3.61e-124 360
Msa0195190 AT4G08780.1 53.994 313 142 2 21 331 21 333 7.23e-123 357
Msa0195190 AT3G49110.1 55.864 324 138 3 7 328 19 339 1.76e-122 357
Msa0195190 AT2G18140.1 50.993 302 147 1 24 325 35 335 8.77e-107 316
Msa0195190 AT5G19890.1 50.765 327 152 5 1 325 8 327 1.01e-105 313
Msa0195190 AT2G18150.1 50.000 300 149 1 26 325 38 336 1.07e-105 313
Msa0195190 AT4G36430.1 47.335 319 166 2 9 326 14 331 1.94e-104 310
Msa0195190 AT5G66390.1 47.771 314 162 2 12 325 22 333 6.77e-104 308
Msa0195190 AT5G19880.1 50.814 307 148 2 22 325 23 329 2.15e-102 305
Msa0195190 AT1G44970.1 50.164 305 152 0 21 325 42 346 2.95e-102 305
Msa0195190 AT1G49570.1 48.867 309 153 3 18 323 42 348 1.10e-100 301
Msa0195190 AT3G50990.1 47.386 306 160 1 22 327 39 343 1.43e-99 298
Msa0195190 AT1G14550.1 48.525 305 149 3 22 325 24 321 2.73e-96 289
Msa0195190 AT5G05340.1 47.386 306 150 4 22 325 28 324 8.19e-95 285
Msa0195190 AT1G14540.1 46.273 322 166 2 4 325 1 315 2.78e-92 278
Msa0195190 AT1G68850.1 46.945 311 151 8 24 325 30 335 9.35e-92 278
Msa0195190 AT4G16270.1 45.485 299 158 4 28 325 54 348 1.00e-90 275
Msa0195190 AT2G35380.1 48.344 302 152 3 28 325 34 335 2.61e-89 271
Msa0195190 AT5G58390.1 46.462 325 160 6 6 325 1 316 3.85e-89 270
Msa0195190 AT5G58400.1 44.062 320 167 5 9 325 15 325 7.92e-86 262
Msa0195190 AT3G03670.1 42.902 317 178 2 9 325 8 321 3.40e-85 260
Msa0195190 AT2G22420.1 42.020 307 163 5 24 325 23 319 3.15e-81 250
Msa0195190 AT1G71695.1 44.156 308 160 6 24 328 44 342 2.77e-80 249
Msa0195190 AT2G41480.1 41.994 331 179 7 1 325 5 328 4.24e-80 248
Msa0195190 AT5G51890.1 38.318 321 191 5 6 325 8 322 6.55e-79 244
Msa0195190 AT5G17820.1 41.311 305 167 5 21 325 21 313 2.93e-78 242
Msa0195190 AT4G11290.1 41.033 329 184 6 4 325 1 326 4.27e-78 242
Msa0195190 AT5G64120.1 42.202 327 170 8 9 325 11 328 6.01e-78 242
Msa0195190 AT3G01190.1 41.121 321 181 6 6 325 8 321 9.92e-78 241
Msa0195190 AT5G15180.1 40.984 305 170 5 24 325 32 329 2.01e-77 241
Msa0195190 AT5G17820.2 41.176 306 168 5 20 325 73 366 9.21e-77 240
Msa0195190 AT5G42180.1 41.722 302 167 6 24 324 23 316 7.32e-76 236
Msa0195190 AT4G25980.1 41.066 319 177 5 12 325 14 326 7.58e-76 236
Msa0195190 AT1G05260.1 40.062 322 187 5 7 326 9 326 2.89e-75 235
Msa0195190 AT4G37530.1 42.345 307 172 3 22 325 25 329 4.47e-74 232
Msa0195190 AT5G39580.1 44.000 300 157 7 28 325 29 319 1.05e-73 231
Msa0195190 AT3G21770.1 40.777 309 177 5 16 322 21 325 1.08e-73 231
Msa0195190 AT4G33420.1 41.325 317 167 7 15 325 22 325 1.65e-73 231
Msa0195190 AT4G33420.2 41.325 317 167 7 15 325 69 372 6.63e-73 231
Msa0195190 AT2G18980.1 40.810 321 179 5 9 325 10 323 9.02e-73 229
Msa0195190 AT1G30870.1 40.523 306 169 6 24 326 51 346 5.03e-70 222
Msa0195190 AT1G05240.1 39.286 308 173 5 24 325 26 325 9.14e-70 221
Msa0195190 AT1G05250.1 39.286 308 173 5 24 325 26 325 9.14e-70 221
Msa0195190 AT4G30170.1 39.610 308 175 5 22 325 25 325 9.28e-69 218
Msa0195190 AT4G33870.1 35.629 334 177 5 24 322 68 398 6.77e-68 219
Msa0195190 AT4G31760.1 38.462 325 181 5 13 325 9 326 8.24e-68 216
Msa0195190 AT5G64100.1 42.053 302 160 7 28 325 41 331 1.11e-67 216
Msa0195190 AT5G14130.1 39.032 310 174 7 22 325 30 330 2.39e-67 215
Msa0195190 AT5G14130.2 39.032 310 174 7 22 325 71 371 6.30e-67 215
Msa0195190 AT3G49960.1 37.461 323 197 3 6 325 9 329 9.39e-67 213
Msa0195190 AT5G64110.1 40.864 301 167 5 28 325 38 330 1.09e-66 213
Msa0195190 AT2G35380.2 46.964 247 127 3 83 325 1 247 2.17e-66 209
Msa0195190 AT5G40150.1 38.462 312 183 4 16 325 24 328 3.70e-66 212
Msa0195190 AT3G28200.1 37.987 308 177 5 22 325 19 316 4.38e-66 211
Msa0195190 AT4G37520.1 39.088 307 182 3 22 325 25 329 4.42e-66 211
Msa0195190 AT5G24070.1 41.404 285 154 6 51 330 64 340 2.53e-65 210
Msa0195190 AT2G24800.1 40.260 308 173 5 22 325 29 329 8.89e-65 208
Msa0195190 AT5G67400.1 40.584 308 176 5 22 325 25 329 1.04e-64 208
Msa0195190 AT4G26010.1 37.658 316 181 6 11 325 9 309 1.19e-64 207
Msa0195190 AT4G37530.2 43.922 255 140 2 22 273 25 279 1.62e-64 206
Msa0195190 AT4G37520.2 38.762 307 180 4 22 325 25 326 1.75e-64 207
Msa0195190 AT2G34060.1 38.636 308 180 6 21 322 39 343 2.11e-64 208
Msa0195190 AT4G26010.2 38.050 318 177 7 11 325 37 337 2.92e-64 207
Msa0195190 AT1G77100.1 39.938 323 176 8 11 325 7 319 3.94e-64 206
Msa0195190 AT2G39040.1 39.228 311 178 7 22 325 44 350 3.88e-63 204
Msa0195190 AT2G43480.1 41.429 280 151 6 51 325 64 335 1.32e-62 203
Msa0195190 AT5G22410.1 36.129 310 184 7 18 322 22 322 1.87e-60 197
Msa0195190 AT1G24110.1 34.528 307 194 5 22 325 20 322 1.76e-59 194
Msa0195190 AT5G47000.1 33.754 317 200 5 12 325 21 330 3.23e-59 194
Msa0195190 AT1G34510.1 36.392 316 185 6 11 325 9 309 3.29e-59 193
Msa0195190 AT4G17690.1 35.738 305 185 5 24 325 26 322 5.96e-57 188
Msa0195190 AT3G17070.1 33.131 329 204 7 7 325 17 339 2.81e-53 179
Msa0195190 AT2G37130.1 33.121 314 198 5 16 325 22 327 2.05e-49 168
Msa0195190 AT4G21960.1 32.047 337 211 6 1 327 1 329 8.07e-48 164
Msa0195190 AT2G37130.2 33.444 302 189 5 28 325 3 296 2.27e-47 162
Msa0195190 AT4G25980.2 45.604 182 95 3 12 193 59 236 3.44e-47 161
Msa0195190 AT3G17070.2 31.786 280 178 7 52 325 4 276 7.89e-40 142
Msa0195190 AT5G39580.2 45.614 171 88 3 28 198 29 194 6.05e-39 138
Msa0195190 AT2G24800.2 43.023 172 94 1 22 193 29 196 7.66e-35 128
Msa0195190 AT1G77490.2 26.022 269 149 11 58 309 106 341 2.03e-15 77.4
Msa0195190 AT1G77490.1 26.022 269 149 11 58 309 106 341 2.61e-15 77.0
Msa0195190 AT3G42570.1 29.787 141 86 4 53 191 20 149 3.57e-12 63.9

Find 70 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTGTTCCCTGTTCCATTT+TGG 0.151832 2_1:+11966626 None:intergenic
AGGGAACAATCTCACTAATT+TGG 0.252401 2_1:-11966614 Msa0195190:CDS
TAGGGTGTCCATGATTAAAA+TGG 0.263076 2_1:-11966428 Msa0195190:CDS
AAGTTGATCCAATGAGAAAA+AGG 0.270141 2_1:+11967422 None:intergenic
AATGAGACTGGCACCAATTC+GGG 0.277255 2_1:+11969280 None:intergenic
CCTCTTAATGAGTTTATGTT+TGG 0.284231 2_1:+11968569 None:intergenic
TAGAGTTTGATCTGGATTTC+CGG 0.302334 2_1:+11966687 None:intergenic
CACTTTGAAGTAAGCCTTTG+TGG 0.319319 2_1:+11966539 None:intergenic
AATATGACTCTAAACACAAT+AGG 0.329328 2_1:+11969323 None:intergenic
CGTGAGATATGTCCCCAAAA+TGG 0.335411 2_1:-11966640 Msa0195190:CDS
CTGGTGATCAAGGGGAAATT+AGG 0.335959 2_1:-11966387 Msa0195190:CDS
GCCTTTGTGGCTTTGAAGAT+TGG 0.338713 2_1:+11966552 None:intergenic
CATTAAGACTGCACACAAAA+AGG 0.341081 2_1:+11969406 None:intergenic
CATAAACTCATTAAGAGGTT+TGG 0.346112 2_1:-11968564 Msa0195190:CDS
CAAATTGATTTGGTGTAGTA+AGG 0.382467 2_1:+11966590 None:intergenic
ATGGGTTCCATGAATGTACT+AGG 0.387048 2_1:-11969434 Msa0195190:CDS
AAAGCTGCATTTCTTGTTCA+AGG 0.391405 2_1:-11967399 Msa0195190:CDS
CCAAACATAAACTCATTAAG+AGG 0.391730 2_1:-11968569 Msa0195190:CDS
ATGATTAAAATGGCTAATAT+TGG 0.393103 2_1:-11966418 Msa0195190:CDS
TCCCTCACTGATCCCCGAAT+TGG 0.403147 2_1:-11969293 Msa0195190:CDS
GAATTGGTGCCAGTCTCATT+AGG 0.407331 2_1:-11969277 Msa0195190:CDS
GCTAATATTGGTGTACTAAC+TGG 0.408331 2_1:-11966406 Msa0195190:CDS
GGCAAATTCCATTGGGAAGA+AGG 0.414683 2_1:-11967494 Msa0195190:CDS
AATTTGTTGTCAAATTGATT+TGG 0.417521 2_1:+11966580 None:intergenic
TAATGAGACTGGCACCAATT+CGG 0.418061 2_1:+11969279 None:intergenic
ATATGTCCCCAAAATGGAAC+AGG 0.420463 2_1:-11966634 Msa0195190:CDS
TGTCCAGGTGCTCATACGTT+TGG 0.426594 2_1:-11966760 Msa0195190:intron
GGTATAGAAATGGACATGTT+TGG 0.432530 2_1:+11969345 None:intergenic
GTTGTGTTTAGAGTTTGATC+TGG 0.433592 2_1:+11966679 None:intergenic
GGCCACCCCTAGTACATTCA+TGG 0.444356 2_1:+11969427 None:intergenic
AACACAATAGGGTATAGAAA+TGG 0.446200 2_1:+11969335 None:intergenic
ATGGCAATAGTATCTGCATT+AGG 0.448956 2_1:+11966496 None:intergenic
ATATGACTCTAAACACAATA+GGG 0.454551 2_1:+11969324 None:intergenic
GGTGTACTAACTGGTGATCA+AGG 0.458052 2_1:-11966397 Msa0195190:CDS
ATACTTGAACAAAGCAATCA+TGG 0.458644 2_1:+11969246 None:intergenic
GCAGATTCCTCTGCATTATC+CGG 0.462932 2_1:-11966343 Msa0195190:CDS
CCCTCATGGCAAATTCCATT+GGG 0.466184 2_1:-11967501 Msa0195190:CDS
TGTGCAGTCTTAATGCATGC+TGG 0.471905 2_1:-11969398 Msa0195190:CDS
TCCCTCATGGCAAATTCCAT+TGG 0.478606 2_1:-11967502 Msa0195190:CDS
AGCTCAAGTAGCTTCTGTTC+TGG 0.481365 2_1:-11968462 Msa0195190:intron
AATTCTCAAAGAAGAGAGCT+TGG 0.499261 2_1:+11966452 None:intergenic
ACAGATTTAGTTACACTCTC+AGG 0.505239 2_1:-11967366 Msa0195190:intron
CCCAATGGAATTTGCCATGA+GGG 0.510090 2_1:+11967501 None:intergenic
TGTGTTTAGAGTCATATTTG+AGG 0.521122 2_1:-11969318 Msa0195190:CDS
CATGTTTGGCTGTAAAATGA+AGG 0.525454 2_1:+11969359 None:intergenic
TTATACAATTTCAATAGCAC+CGG 0.526663 2_1:-11966706 Msa0195190:CDS
GTGTACTAACTGGTGATCAA+GGG 0.539547 2_1:-11966396 Msa0195190:CDS
TTGGTTTATGAACAGGGAGG+AGG 0.539593 2_1:-11967525 Msa0195190:intron
AAACTATCCCTTCTTCCCAA+TGG 0.540488 2_1:+11967486 None:intergenic
AAGCTGCATTTCTTGTTCAA+GGG 0.544571 2_1:-11967398 Msa0195190:CDS
TTCCATGAATGTACTAGGGG+TGG 0.544977 2_1:-11969429 Msa0195190:CDS
TGGGTTCCATGAATGTACTA+GGG 0.550297 2_1:-11969433 Msa0195190:CDS
GCAAATTCCATTGGGAAGAA+GGG 0.554150 2_1:-11967493 Msa0195190:CDS
GAAATGAAGCCTAATGAGAC+TGG 0.563857 2_1:+11969268 None:intergenic
GTGCAGTCTTAATGCATGCT+GGG 0.565360 2_1:-11969397 Msa0195190:CDS
ACCAATTCGGGGATCAGTGA+GGG 0.574096 2_1:+11969292 None:intergenic
TGTTTGTGACAGGGTTGCGA+TGG 0.579435 2_1:-11968644 Msa0195190:intron
TCAGCACAAGAAACAGTGGC+TGG 0.593952 2_1:+11968500 None:intergenic
AACAGGGAGGAGGTCCCTCA+TGG 0.596475 2_1:-11967515 Msa0195190:intron
TCCAATCTTCAAAGCCACAA+AGG 0.630443 2_1:-11966553 Msa0195190:CDS
ATGAGACTGGCACCAATTCG+GGG 0.640565 2_1:+11969281 None:intergenic
ACTACTAAAGCTATTAACAA+TGG 0.641189 2_1:+11966477 None:intergenic
TGTACTAACTGGTGATCAAG+GGG 0.649642 2_1:-11966395 Msa0195190:CDS
GATTCCTCTGCATTATCCGG+TGG 0.650928 2_1:-11966340 Msa0195190:CDS
AATATCAGCACAAGAAACAG+TGG 0.657026 2_1:+11968496 None:intergenic
CACCAATTCGGGGATCAGTG+AGG 0.657501 2_1:+11969291 None:intergenic
TGCACCACCGGATAATGCAG+AGG 0.673498 2_1:+11966336 None:intergenic
GGGTTCCATGAATGTACTAG+GGG 0.674090 2_1:-11969432 Msa0195190:CDS
TCCCAATGGAATTTGCCATG+AGG 0.679713 2_1:+11967500 None:intergenic
TATGTCCCCAAAATGGAACA+GGG 0.733433 2_1:-11966633 Msa0195190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTAAAAATAGC+AGG - chr2_1:11967382-11967401 Msa0195190:CDS 10.0%
!!! ATTATTTTTAGTATATATGT+AGG + chr2_1:11967684-11967703 None:intergenic 10.0%
!!! ACTAATATAAATAATTTGTT+TGG - chr2_1:11967811-11967830 Msa0195190:intron 10.0%
!!! AACTTTTTATTAAACTTTAT+TGG + chr2_1:11968771-11968790 None:intergenic 10.0%
!!! TAGTTTTATAGTGATAATTT+TGG - chr2_1:11967557-11967576 Msa0195190:intron 15.0%
!!! AGTTTTATAGTGATAATTTT+GGG - chr2_1:11967558-11967577 Msa0195190:intron 15.0%
!! TAAACTAGTAACTAATATAT+TGG - chr2_1:11968196-11968215 Msa0195190:intron 15.0%
!! TTAATCATAACTGATATAAA+AGG + chr2_1:11968648-11968667 None:intergenic 15.0%
!! TATACAAAAGTTAAAATTTC+AGG + chr2_1:11968960-11968979 None:intergenic 15.0%
!! AGAAATCATGATCTATATAT+AGG + chr2_1:11966561-11966580 None:intergenic 20.0%
!!! AAATTAAAGTGGATTGTATT+AGG + chr2_1:11966601-11966620 None:intergenic 20.0%
!! AATAACCAAAATTATTGTAG+TGG + chr2_1:11966631-11966650 None:intergenic 20.0%
!!! TTTTATCTATATAACTAGCT+AGG + chr2_1:11967342-11967361 None:intergenic 20.0%
!! GTAATCAATGAATTAATATC+TGG - chr2_1:11967410-11967429 Msa0195190:CDS 20.0%
!! TAATTAATGTTCTTAGAGAA+TGG + chr2_1:11967443-11967462 None:intergenic 20.0%
!!! ATTTTATTGTTTTCTTTTGC+AGG - chr2_1:11967525-11967544 Msa0195190:intron 20.0%
!!! TTTTATTGTTTTCTTTTGCA+GGG - chr2_1:11967526-11967545 Msa0195190:intron 20.0%
!!! TTTTTTTTTTTTTGACGAAC+AGG - chr2_1:11967645-11967664 Msa0195190:intron 20.0%
!! ACTAAAAATAATGAATGTCT+TGG - chr2_1:11967692-11967711 Msa0195190:intron 20.0%
!!! TTTTTGTATGTTTTGTTTTC+AGG + chr2_1:11967771-11967790 None:intergenic 20.0%
!! AGAATACAGAAAAATAAAAG+TGG + chr2_1:11968144-11968163 None:intergenic 20.0%
!!! TATTAGTTACTAGTTTAAGA+TGG + chr2_1:11968193-11968212 None:intergenic 20.0%
!!! TAATATATTGGTTTATGAAC+AGG - chr2_1:11968208-11968227 Msa0195190:intron 20.0%
!!! AATATATTGGTTTATGAACA+GGG - chr2_1:11968209-11968228 Msa0195190:intron 20.0%
!! TTACCAACAATTTCATAAAA+AGG - chr2_1:11968425-11968444 Msa0195190:intron 20.0%
!!! CACATAATAACTTTTTACAT+TGG - chr2_1:11968497-11968516 Msa0195190:CDS 20.0%
!!! AATTTGTTGTCAAATTGATT+TGG + chr2_1:11969163-11969182 None:intergenic 20.0%
!!! AATATTAGCCATTTTAATCA+TGG + chr2_1:11969323-11969342 None:intergenic 20.0%
!! ATGATTAAAATGGCTAATAT+TGG - chr2_1:11969322-11969341 Msa0195190:CDS 20.0%
! ATATGACTCTAAACACAATA+GGG + chr2_1:11966419-11966438 None:intergenic 25.0%
! AATATGACTCTAAACACAAT+AGG + chr2_1:11966420-11966439 None:intergenic 25.0%
!! TATATAGGAAGAGCTTTATA+TGG + chr2_1:11966546-11966565 None:intergenic 25.0%
!! ATGAACCACTACAATAATTT+TGG - chr2_1:11966623-11966642 Msa0195190:CDS 25.0%
! TTTCCTTCAGTAATTACTAA+CGG - chr2_1:11966820-11966839 Msa0195190:intron 25.0%
!! ATTGTGTTACTGAAAAAACA+TGG - chr2_1:11966959-11966978 Msa0195190:intron 25.0%
!! CATAGATTTTTGTCTTTTAG+TGG - chr2_1:11967028-11967047 Msa0195190:intron 25.0%
!!! ATTAGCTTTAGTCAAACAAA+AGG + chr2_1:11967868-11967887 None:intergenic 25.0%
!!! GCTAATATTGAACTTGTTAA+AGG - chr2_1:11967882-11967901 Msa0195190:intron 25.0%
!! AGTTTTTATCTACTTAACGT+GGG + chr2_1:11967957-11967976 None:intergenic 25.0%
!! AAGTTTTTATCTACTTAACG+TGG + chr2_1:11967958-11967977 None:intergenic 25.0%
! TAAGACTTAAACCAATAGTA+AGG + chr2_1:11968046-11968065 None:intergenic 25.0%
! AATTTAAGTCTTAACTTTCG+TGG + chr2_1:11968097-11968116 None:intergenic 25.0%
!! AGTCCTTTTTATGAAATTGT+TGG + chr2_1:11968431-11968450 None:intergenic 25.0%
! TACAATAGAAGAATCTACAT+CGG + chr2_1:11968554-11968573 None:intergenic 25.0%
!! TACAAAAAATCGGTTTACAT+TGG + chr2_1:11968724-11968743 None:intergenic 25.0%
!!! TAAACCGATTTTTTGTACAA+CGG - chr2_1:11968727-11968746 Msa0195190:intron 25.0%
! ATAACCGTTGTACAAAAAAT+CGG + chr2_1:11968734-11968753 None:intergenic 25.0%
!!! TTTAACTTTTGTATATGTCC+AGG - chr2_1:11968965-11968984 Msa0195190:intron 25.0%
! TTATACAATTTCAATAGCAC+CGG - chr2_1:11969034-11969053 Msa0195190:intron 25.0%
! ACTACTAAAGCTATTAACAA+TGG + chr2_1:11969266-11969285 None:intergenic 25.0%
!!! TCTCTTCTTTGAGAATTTTA+GGG - chr2_1:11969294-11969313 Msa0195190:CDS 25.0%
AACACAATAGGGTATAGAAA+TGG + chr2_1:11966408-11966427 None:intergenic 30.0%
! TGTGTTTAGAGTCATATTTG+AGG - chr2_1:11966422-11966441 Msa0195190:CDS 30.0%
ATACTTGAACAAAGCAATCA+TGG + chr2_1:11966497-11966516 None:intergenic 30.0%
GTGGTTCATTCAAATTAAAG+TGG + chr2_1:11966612-11966631 None:intergenic 30.0%
! AATACACATTACTGGCTAAT+CGG - chr2_1:11966694-11966713 Msa0195190:CDS 30.0%
AACGTCAATAAAGTTACTGA+CGG - chr2_1:11966744-11966763 Msa0195190:CDS 30.0%
ATCTGATGAAGAATTACTGA+GGG - chr2_1:11966794-11966813 Msa0195190:intron 30.0%
ATTCCGTTAGTAATTACTGA+AGG + chr2_1:11966826-11966845 None:intergenic 30.0%
TTCAGTAATTACTAACGGAA+TGG - chr2_1:11966825-11966844 Msa0195190:intron 30.0%
!!! TTCTTGTTTTACGATACTGA+CGG + chr2_1:11966870-11966889 None:intergenic 30.0%
TTCATGTGCACTACATTAAT+TGG + chr2_1:11966899-11966918 None:intergenic 30.0%
ACATGCATAAACAACAACTT+TGG + chr2_1:11967079-11967098 None:intergenic 30.0%
CCTCTTAATGAGTTTATGTT+TGG + chr2_1:11967174-11967193 None:intergenic 30.0%
CCAAACATAAACTCATTAAG+AGG - chr2_1:11967171-11967190 Msa0195190:intron 30.0%
CATAAACTCATTAAGAGGTT+TGG - chr2_1:11967176-11967195 Msa0195190:intron 30.0%
ATGATACTTGAAACTACTAC+TGG - chr2_1:11967490-11967509 Msa0195190:CDS 30.0%
TGCTCACTAAAATAATTGAC+AGG - chr2_1:11967614-11967633 Msa0195190:intron 30.0%
GTTCAACTCAAATACTAATC+CGG + chr2_1:11968020-11968039 None:intergenic 30.0%
TTGGTTTAAGTCTTAACAGT+TGG - chr2_1:11968051-11968070 Msa0195190:intron 30.0%
GACATATAAGTCTTAACTGT+TGG + chr2_1:11968122-11968141 None:intergenic 30.0%
AGTTGATCCAATGAGAAAAA+GGG + chr2_1:11968320-11968339 None:intergenic 30.0%
! AAGTTGATCCAATGAGAAAA+AGG + chr2_1:11968321-11968340 None:intergenic 30.0%
! CTTTCAATTTTCCACAATCA+AGG + chr2_1:11968622-11968641 None:intergenic 30.0%
! AAATCGGTTTACATTGGTTA+AGG + chr2_1:11968718-11968737 None:intergenic 30.0%
!! CAAATTGATTTGGTGTAGTA+AGG + chr2_1:11969153-11969172 None:intergenic 30.0%
!! CTCTCTTCTTTGAGAATTTT+AGG - chr2_1:11969293-11969312 Msa0195190:CDS 30.0%
CATTAAGACTGCACACAAAA+AGG + chr2_1:11966337-11966356 None:intergenic 35.0%
CATGTTTGGCTGTAAAATGA+AGG + chr2_1:11966384-11966403 None:intergenic 35.0%
GGTATAGAAATGGACATGTT+TGG + chr2_1:11966398-11966417 None:intergenic 35.0%
!! AAAGTGGATTGTATTAGGTC+TGG + chr2_1:11966596-11966615 None:intergenic 35.0%
CCAGTAATGTGTATTACTGA+GGG + chr2_1:11966689-11966708 None:intergenic 35.0%
GATCTGATGAAGAATTACTG+AGG - chr2_1:11966793-11966812 Msa0195190:intron 35.0%
!!! ACTGACGGATTTTTCTATAC+CGG + chr2_1:11966855-11966874 None:intergenic 35.0%
TGTTTATGCATGTTTGTGAC+AGG - chr2_1:11967086-11967105 Msa0195190:intron 35.0%
GTTTATGCATGTTTGTGACA+GGG - chr2_1:11967087-11967106 Msa0195190:intron 35.0%
AATATCAGCACAAGAAACAG+TGG + chr2_1:11967247-11967266 None:intergenic 35.0%
!! AGTGATAATTTTGGGTAACG+AGG - chr2_1:11967566-11967585 Msa0195190:intron 35.0%
TTGATCTGATCAAAGCCAAT+GGG + chr2_1:11967730-11967749 None:intergenic 35.0%
CAAAAGGTTCAACATTAGCT+AGG + chr2_1:11967852-11967871 None:intergenic 35.0%
TCAAATACTAATCCGGTAGA+TGG + chr2_1:11968013-11968032 None:intergenic 35.0%
AGTTGAACTCTCCTTACTAT+TGG - chr2_1:11968032-11968051 Msa0195190:intron 35.0%
!! ATATTGGTTTATGAACAGGG+AGG - chr2_1:11968212-11968231 Msa0195190:intron 35.0%
!!! TGGAAGGTTTTGATTTGCAA+GGG + chr2_1:11968294-11968313 None:intergenic 35.0%
AAAGCTGCATTTCTTGTTCA+AGG - chr2_1:11968341-11968360 Msa0195190:intron 35.0%
AAGCTGCATTTCTTGTTCAA+GGG - chr2_1:11968342-11968361 Msa0195190:intron 35.0%
ACAGATTTAGTTACACTCTC+AGG - chr2_1:11968374-11968393 Msa0195190:intron 35.0%
TAGAGTTTGATCTGGATTTC+CGG + chr2_1:11969056-11969075 None:intergenic 35.0%
! GTTGTGTTTAGAGTTTGATC+TGG + chr2_1:11969064-11969083 None:intergenic 35.0%
! ATTGTTCCCTGTTCCATTTT+GGG + chr2_1:11969116-11969135 None:intergenic 35.0%
AGGGAACAATCTCACTAATT+TGG - chr2_1:11969126-11969145 Msa0195190:intron 35.0%
ATGGCAATAGTATCTGCATT+AGG + chr2_1:11969247-11969266 None:intergenic 35.0%
AATTCTCAAAGAAGAGAGCT+TGG + chr2_1:11969291-11969310 None:intergenic 35.0%
! TAGGGTGTCCATGATTAAAA+TGG - chr2_1:11969312-11969331 Msa0195190:CDS 35.0%
GCTAATATTGGTGTACTAAC+TGG - chr2_1:11969334-11969353 Msa0195190:CDS 35.0%
! TTCATCTTTTAATGCACCAC+CGG + chr2_1:11969419-11969438 None:intergenic 35.0%
ATGGGTTCCATGAATGTACT+AGG - chr2_1:11966306-11966325 Msa0195190:CDS 40.0%
TGGGTTCCATGAATGTACTA+GGG - chr2_1:11966307-11966326 Msa0195190:CDS 40.0%
TAATGAGACTGGCACCAATT+CGG + chr2_1:11966464-11966483 None:intergenic 40.0%
GAAATGAAGCCTAATGAGAC+TGG + chr2_1:11966475-11966494 None:intergenic 40.0%
CCCTCAGTAATACACATTAC+TGG - chr2_1:11966686-11966705 Msa0195190:CDS 40.0%
GCCAGTAATGTGTATTACTG+AGG + chr2_1:11966690-11966709 None:intergenic 40.0%
! ACGGAATTTTCCCTCAGTAA+TGG - chr2_1:11966763-11966782 Msa0195190:intron 40.0%
ATCACTCACTCCATTACTGA+GGG + chr2_1:11966776-11966795 None:intergenic 40.0%
TGGCTAAAATTGAACCCCAT+TGG - chr2_1:11967712-11967731 Msa0195190:intron 40.0%
TGATCTGATCAAAGCCAATG+GGG + chr2_1:11967729-11967748 None:intergenic 40.0%
GTTGATCTGATCAAAGCCAA+TGG + chr2_1:11967731-11967750 None:intergenic 40.0%
!! AACTTGTTAAAGGAGCGTCT+AGG - chr2_1:11967892-11967911 Msa0195190:intron 40.0%
GCAAATTCCATTGGGAAGAA+GGG - chr2_1:11968247-11968266 Msa0195190:intron 40.0%
AAACTATCCCTTCTTCCCAA+TGG + chr2_1:11968257-11968276 None:intergenic 40.0%
!!! CTGGAAGGTTTTGATTTGCA+AGG + chr2_1:11968295-11968314 None:intergenic 40.0%
! GGCATTTTTCACCTTGATTG+TGG - chr2_1:11968608-11968627 Msa0195190:CDS 40.0%
ATATGTCCCCAAAATGGAAC+AGG - chr2_1:11969106-11969125 Msa0195190:intron 40.0%
TATGTCCCCAAAATGGAACA+GGG - chr2_1:11969107-11969126 Msa0195190:intron 40.0%
! TTGTTCCCTGTTCCATTTTG+GGG + chr2_1:11969115-11969134 None:intergenic 40.0%
! GATTGTTCCCTGTTCCATTT+TGG + chr2_1:11969117-11969136 None:intergenic 40.0%
TCCAATCTTCAAAGCCACAA+AGG - chr2_1:11969187-11969206 Msa0195190:intron 40.0%
!! CACTTTGAAGTAAGCCTTTG+TGG + chr2_1:11969204-11969223 None:intergenic 40.0%
GTGTACTAACTGGTGATCAA+GGG - chr2_1:11969344-11969363 Msa0195190:CDS 40.0%
TGTACTAACTGGTGATCAAG+GGG - chr2_1:11969345-11969364 Msa0195190:CDS 40.0%
GGGTTCCATGAATGTACTAG+GGG - chr2_1:11966308-11966327 Msa0195190:CDS 45.0%
TTCCATGAATGTACTAGGGG+TGG - chr2_1:11966311-11966330 Msa0195190:CDS 45.0%
TGTGCAGTCTTAATGCATGC+TGG - chr2_1:11966342-11966361 Msa0195190:CDS 45.0%
GTGCAGTCTTAATGCATGCT+GGG - chr2_1:11966343-11966362 Msa0195190:CDS 45.0%
AATGAGACTGGCACCAATTC+GGG + chr2_1:11966463-11966482 None:intergenic 45.0%
!! GAATTGGTGCCAGTCTCATT+AGG - chr2_1:11966463-11966482 Msa0195190:CDS 45.0%
GATCACTCACTCCATTACTG+AGG + chr2_1:11966777-11966796 None:intergenic 45.0%
!! GACGGATTTTTCTATACCGG+CGG + chr2_1:11966852-11966871 None:intergenic 45.0%
AGCTCAAGTAGCTTCTGTTC+TGG - chr2_1:11967278-11967297 Msa0195190:intron 45.0%
!! AAAGGAGCGTCTAGGATTCA+TGG - chr2_1:11967900-11967919 Msa0195190:intron 45.0%
TGGATATGTCGTACGTGAGA+AGG + chr2_1:11968173-11968192 None:intergenic 45.0%
TTGGTTTATGAACAGGGAGG+AGG - chr2_1:11968215-11968234 Msa0195190:intron 45.0%
TCCCTCATGGCAAATTCCAT+TGG - chr2_1:11968238-11968257 Msa0195190:intron 45.0%
CCCAATGGAATTTGCCATGA+GGG + chr2_1:11968242-11968261 None:intergenic 45.0%
CCCTCATGGCAAATTCCATT+GGG - chr2_1:11968239-11968258 Msa0195190:intron 45.0%
TCCCAATGGAATTTGCCATG+AGG + chr2_1:11968243-11968262 None:intergenic 45.0%
GGCAAATTCCATTGGGAAGA+AGG - chr2_1:11968246-11968265 Msa0195190:intron 45.0%
!!! GGTTTTGATTTGCAAGGGCT+TGG + chr2_1:11968289-11968308 None:intergenic 45.0%
!! ATGAGAAAAAGGGTGCTGGA+AGG + chr2_1:11968310-11968329 None:intergenic 45.0%
! TCCAGCACCCTTTTTCTCAT+TGG - chr2_1:11968310-11968329 Msa0195190:intron 45.0%
! TCCAATGAGAAAAAGGGTGC+TGG + chr2_1:11968314-11968333 None:intergenic 45.0%
TTAAACACTTCTTGTCCCCC+TGG - chr2_1:11968585-11968604 Msa0195190:CDS 45.0%
TAAACACTTCTTGTCCCCCT+GGG - chr2_1:11968586-11968605 Msa0195190:CDS 45.0%
TCAAGGTGAAAAATGCCCCA+GGG + chr2_1:11968605-11968624 None:intergenic 45.0%
ATCAAGGTGAAAAATGCCCC+AGG + chr2_1:11968606-11968625 None:intergenic 45.0%
CGTGAGATATGTCCCCAAAA+TGG - chr2_1:11969100-11969119 Msa0195190:intron 45.0%
!! GCCTTTGTGGCTTTGAAGAT+TGG + chr2_1:11969191-11969210 None:intergenic 45.0%
GGTGTACTAACTGGTGATCA+AGG - chr2_1:11969343-11969362 Msa0195190:CDS 45.0%
CTGGTGATCAAGGGGAAATT+AGG - chr2_1:11969353-11969372 Msa0195190:CDS 45.0%
GCAGATTCCTCTGCATTATC+CGG - chr2_1:11969397-11969416 Msa0195190:CDS 45.0%
ACCAATTCGGGGATCAGTGA+GGG + chr2_1:11966451-11966470 None:intergenic 50.0%
ATGAGACTGGCACCAATTCG+GGG + chr2_1:11966462-11966481 None:intergenic 50.0%
TTACTAACGGAATGGTCCGC+CGG - chr2_1:11966833-11966852 Msa0195190:intron 50.0%
TGTTTGTGACAGGGTTGCGA+TGG - chr2_1:11967096-11967115 Msa0195190:intron 50.0%
TCAGCACAAGAAACAGTGGC+TGG + chr2_1:11967243-11967262 None:intergenic 50.0%
CGGTAGATGGAAGAGTCTCA+CGG + chr2_1:11968000-11968019 None:intergenic 50.0%
CGTGAGACTCTTCCATCTAC+CGG - chr2_1:11967998-11968017 Msa0195190:intron 50.0%
AAACACTTCTTGTCCCCCTG+GGG - chr2_1:11968587-11968606 Msa0195190:CDS 50.0%
AAGGTGAAAAATGCCCCAGG+GGG + chr2_1:11968603-11968622 None:intergenic 50.0%
CAAGGTGAAAAATGCCCCAG+GGG + chr2_1:11968604-11968623 None:intergenic 50.0%
TGTCCAGGTGCTCATACGTT+TGG - chr2_1:11968980-11968999 Msa0195190:intron 50.0%
CTTCCAAACGTATGAGCACC+TGG + chr2_1:11968986-11969005 None:intergenic 50.0%
GATTCCTCTGCATTATCCGG+TGG - chr2_1:11969400-11969419 Msa0195190:CDS 50.0%
GGCCACCCCTAGTACATTCA+TGG + chr2_1:11966316-11966335 None:intergenic 55.0%
TCCCTCACTGATCCCCGAAT+TGG - chr2_1:11966447-11966466 Msa0195190:CDS 55.0%
CACCAATTCGGGGATCAGTG+AGG + chr2_1:11966452-11966471 None:intergenic 55.0%
TGCACCACCGGATAATGCAG+AGG + chr2_1:11969407-11969426 None:intergenic 55.0%
AACAGGGAGGAGGTCCCTCA+TGG - chr2_1:11968225-11968244 Msa0195190:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 11966306 11969456 11966306 ID=Msa0195190;Name=Msa0195190
chr2_1 mRNA 11966306 11969456 11966306 ID=Msa0195190-mRNA-1;Parent=Msa0195190;Name=Msa0195190-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.66|0.25|1|1|1|4|0|344
chr2_1 exon 11969250 11969456 11969250 ID=Msa0195190-mRNA-1:exon:5221;Parent=Msa0195190-mRNA-1
chr2_1 exon 11968463 11968654 11968463 ID=Msa0195190-mRNA-1:exon:5220;Parent=Msa0195190-mRNA-1
chr2_1 exon 11967367 11967532 11967367 ID=Msa0195190-mRNA-1:exon:5219;Parent=Msa0195190-mRNA-1
chr2_1 exon 11966306 11966775 11966306 ID=Msa0195190-mRNA-1:exon:5218;Parent=Msa0195190-mRNA-1
chr2_1 CDS 11969250 11969456 11969250 ID=Msa0195190-mRNA-1:cds;Parent=Msa0195190-mRNA-1
chr2_1 CDS 11968463 11968654 11968463 ID=Msa0195190-mRNA-1:cds;Parent=Msa0195190-mRNA-1
chr2_1 CDS 11967367 11967532 11967367 ID=Msa0195190-mRNA-1:cds;Parent=Msa0195190-mRNA-1
chr2_1 CDS 11966306 11966775 11966306 ID=Msa0195190-mRNA-1:cds;Parent=Msa0195190-mRNA-1
Gene Sequence

>Msa0195190

ATGGGTTCCATGAATGTACTAGGGGTGGCCTTTTTGTGTGCAGTCTTAATGCATGCTGGGTATGCTCAGCTTAATCCTTCATTTTACAGCCAAACATGTCCATTTCTATACCCTATTGTGTTTAGAGTCATATTTGAGGCTTCCCTCACTGATCCCCGAATTGGTGCCAGTCTCATTAGGCTTCATTTCCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTGTTGAACAACACTGATACAATTGTAAGTGAGCAAGATGCATTTCCAAACATAAACTCATTAAGAGGTTTGGATGTTGTGAATCAAATCAAGACAGCAGTTGAAAATGAATGTCCAGCCACTGTTTCTTGTGCTGATATTCTTACTATTGCAGCTCAAGTAGCTTCTGTTCTGGGAGGAGGTCCCTCATGGCAAATTCCATTGGGAAGAAGGGATAGTTTAACAGCAAACCAAGCCCTTGCAAATCAAAACCTTCCAGCACCCTTTTTCTCATTGGATCAACTTAAAGCTGCATTTCTTGTTCAAGGGCTCAACACTACAGATTTAGTTACACTCTCAGGTGCTCATACGTTTGGAAGAGCTAAGTGTAGCACATTCATTGATCGTTTATACAATTTCAATAGCACCGGAAATCCAGATCAAACTCTAAACACAACTTACTTGCAAACATTGCGTGAGATATGTCCCCAAAATGGAACAGGGAACAATCTCACTAATTTGGACCTTACTACACCAAATCAATTTGACAACAAATTTTACTCCAATCTTCAAAGCCACAAAGGCTTACTTCAAAGTGATCAAGAGCTATTCTCAACTCCTAATGCAGATACTATTGCCATTGTTAATAGCTTTAGTAGTAACCAAGCTCTCTTCTTTGAGAATTTTAGGGTGTCCATGATTAAAATGGCTAATATTGGTGTACTAACTGGTGATCAAGGGGAAATTAGGTTGCAATGTAATTTTATTAATGCAGATTCCTCTGCATTATCCGGTGGTGCATTAAAAGATGAACTTTTAAGCTCATTCTAA

Protein sequence

>Msa0195190

MGSMNVLGVAFLCAVLMHAGYAQLNPSFYSQTCPFLYPIVFRVIFEASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTDTIVSEQDAFPNINSLRGLDVVNQIKTAVENECPATVSCADILTIAAQVASVLGGGPSWQIPLGRRDSLTANQALANQNLPAPFFSLDQLKAAFLVQGLNTTDLVTLSGAHTFGRAKCSTFIDRLYNFNSTGNPDQTLNTTYLQTLREICPQNGTGNNLTNLDLTTPNQFDNKFYSNLQSHKGLLQSDQELFSTPNADTIAIVNSFSSNQALFFENFRVSMIKMANIGVLTGDQGEIRLQCNFINADSSALSGGALKDELLSSF*